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At least 559 records · Page 31Linked to original sources

Seasonal variation in physiological condition of Amblema plicata in the Upper Mississippi River

Measures of physiological condition are being used as sub-lethal endpoints in studies with unionids exposed to a variety of stressors, yet the natural seasonal variation in these measures are largely undocumented. We measured concentrations of glycogen in foot and mantle tissue and a tissue condition index (TCI) in Amblema plicata (Say 1817), about monthly, for 2 years in mussels that were: (1) obtained directly from the Upper Mississippi River (riverine group); and (2) relocated from the river into an artificial pond (relocated group). In both groups, we observed significant seasonal variation in all physiological indicators. Seasonal variation in glycogen was 72% in mantle and 52% in foot tissue and paralleled reproductive activity in this short-term breeder. In the relocated group, most of the variation in glycogen occurred during the first six months after relocation, suggesting that handling stress may have been a contributing factor. The significant seasonal variation in the TCI paralleled glycogen in riverine mussels. We observed tissue-specific differences in glycogen in the riverine group, but not in the relocated group. These data suggest that an interaction of environmental and biological factors influence the energetic status of mussels in natural populations. A better understanding of this variation is needed to interpret changes in physiological condition due to stressors such as relocation.

Journal of Shellfish Research↗

Monitoring trends in bat populations of the United States and territories: Problems and prospects

Bats are ecologically and economically important mammals. The life histories of bats (particularly their low reproductive rates and the need for some species to gather in large aggregations at limited numbers of roosting sites) make their populations vulnerable to declines. Many of the species of bats in the United States (U.S.) and territories are categorized as endangered or threatened, have been candidates for such categories, or are considered species of concern. The importance and vulnerability of bat populations makes monitoring trends in their populations a goal for their future management. However, scientifically rigorous monitoring of bat populations requires well-planned, statistically defensible efforts. This volume reports findings of an expert workshop held to examine the topic of monitoring populations of bats. The workshop participants included leading experts in sampling and analysis of wildlife populations, as well as experts in the biology and conservation of bats. Findings are reported in this volume under two sections. Part I of the report presents contributed papers that provide overviews of past and current efforts at monitoring trends in populations of bats in the U.S. and territories. These papers consider current techniques and problems, and summarize what is known about the status and trends in populations of selected groups of bats. The contributed papers in Part I also include a description of the monitoring program developed for bat populations in the United Kingdom, a critique of monitoring programs in wildlife in general with recommendations for survey and sampling strategies, and a compilation and analysis of existing data on trends in bats of the U.S. and territories. Efforts directed at monitoring bat populations are piecemeal and have shortcomings. In Part II of the report, the workshop participants provide critical analyses of these problems and develop recommendations for improving methods, defining objectives and priorities, gaining mandates, and enhancing information exchange to facilitate future efforts for monitoring trends in U.S. bat populations.

Information and Technology Report↗

The effect of dilution and the use of a post-extraction nucleic acid purification column on the accuracy, precision, and inhibition of environmental DNA samples

Isolation of environmental DNA (eDNA) is an increasingly common method for detecting presence and assessing relative abundance of rare or elusive species in aquatic systems via the isolation of DNA from environmental samples and the amplification of species-specific sequences using quantitative PCR (qPCR). Co-extracted substances that inhibit qPCR can lead to inaccurate results and subsequent misinterpretation about a species’ status in the tested system. We tested three treatments (5-fold and 10-fold dilutions, and spin-column purification) for reducing qPCR inhibition from 21 partially and fully inhibited eDNA samples collected from coastal plain wetlands and mountain headwater streams in the southeastern USA. All treatments reduced the concentration of DNA in the samples. However, column purified samples retained the greatest sensitivity. For stream samples, all three treatments effectively reduced qPCR inhibition. However, for wetland samples, the 5-fold dilution was less effective than other treatments. Quantitative PCR results for column purified samples were more precise than the 5-fold and 10-fold dilutions by 2.2× and 3.7×, respectively. Column purified samples consistently underestimated qPCR-based DNA concentrations by approximately 25%, whereas the directional bias in qPCR-based DNA concentration estimates differed between stream and wetland samples for both dilution treatments. While the directional bias of qPCR-based DNA concentration estimates differed among treatments and locations, the magnitude of inaccuracy did not. Our results suggest that 10-fold dilution and column purification effectively reduce qPCR inhibition in mountain headwater stream and coastal plain wetland eDNA samples, and if applied to all samples in a study, column purification may provide the most accurate relative qPCR-based DNA concentrations estimates while retaining the greatest assay sensitivity.

Biological Conservation↗

When to be discrete: The importance of time formulation in understanding animal movement

Animal movement is essential to our understanding of population dynamics, animal behavior, and the impacts of global change. Coupled with high-resolution biotelemetry data, exciting new inferences about animal movement have been facilitated by various specifications of contemporary models. These approaches differ, but most share common themes. One key distinction is whether the underlying movement process is conceptualized in discrete or continuous time. This is perhaps the greatest source of confusion among practitioners, both in terms of implementation and biological interpretation. In general, animal movement occurs in continuous time but we observe it at fixed discrete-time intervals. Thus, continuous time is conceptually and theoretically appealing, but in practice it is perhaps more intuitive to interpret movement in discrete intervals. With an emphasis on state-space models, we explore the differences and similarities between continuous and discrete versions of mechanistic movement models, establish some common terminology, and indicate under which circumstances one form might be preferred over another. Counter to the overly simplistic view that discrete- and continuous-time conceptualizations are merely different means to the same end, we present novel mathematical results revealing hitherto unappreciated consequences of model formulation on inferences about animal movement. Notably, the speed and direction of movement are intrinsically linked in current continuous-time random walk formulations, and this can have important implications when interpreting animal behavior. We illustrate these concepts in the context of state-space models with multiple movement behavior states using northern fur seal ( Callorhinus ursinus ) biotelemetry data.

Movement Ecology↗

Using microbial source tracking to identify fecal contamination sources in an embayment in Hempstead Harbor on Long Island, New York

The U.S. Geological Survey worked collaboratively with the New York State Department of Environmental Conservation to assess the potential sources of fecal contamination entering Hempstead Harbor, an embayment on the northern shore of Nassau County, Long Island, New York. Water samples are routinely collected by the New York State Department of Environmental Conservation in the harbor and analyzed for fecal coliform bacteria, an indicator of fecal contamination, to determine the need for closure of shellfish beds for harvest and consumption. Fecal coliform and other bacteria are an indicator of the potential presence of pathogenic (disease-causing) bacteria. However, indicator bacteria alone cannot determine the biological or geographical sources of contamination; therefore, microbial source tracking was implemented to determine various biological sources of contamination. In addition, information such as the location, weather and season, surrounding land use, and additional water-quality data (including nutrient and stable isotopes of nitrate analyses) for the location where a sample was collected help determine the geographical source and conveyance of land-based water to the embayment. Our analysis revealed an abundance of human and canine fecal contamination throughout the Hempstead Harbor landscape and that water from municipal separate storm sewer system conveyances was the most likely transport mechanism of this fecal contamination. Resuspension of bed sediment may contribute to fecal contamination in the harbor, but more targeted analyses are needed to support this finding. There was little evidence of groundwater-contributing fecal bacteria by direct discharge from the subsurface. A classification scheme was developed to convey the degree of fecal contamination to stakeholders and resource managers. Based on this classification scheme, the culvert at Glenwood Road and the outfall and the spillway at Skillman Street were identified as locations that contribute substantial fecal contamination to Hempstead Harbor.

New York↗

Water-quality assessment of the upper Snake River Basin, Idaho and western Wyoming — Environmental setting, 1980-92

The 35,800-square-mile upper Snake River Basin is one of 20 areas studied as part of the National Water-Quality Assessment (NAWQA) Program of the U.S. Geological Survey. Objectives of NAWQA are to study ground- and surface-water quality, biology, and their relations to land-use activities. Major land and water uses that affect water quality in the basin are irrigated agriculture, grazing, aquaculture, food processing, and wastewater treatment. Data summarized in this report are used in companion reports to help define the relations among land use, water use, water quality, and biological conditions. The upper Snake River Basin is located in southeastern Idaho and northwestern Wyoming and includes small parts of Nevada and Utah. Total population in the basin was about 425,000 in 1990. Major urban areas are Idaho Falls, Pocatello, Rexburg, and Twin Falls, Idaho, which make up 10, 11,3, and 6 percent of the total population, respectively. Climate in the basin is mostly semiarid and mean annual precipitation ranges from 8 to more than 60 inches. The eastern Snake River Plain is the major geologic feature in the basin and is delineated mostly by Quaternary and Tertiary basalt flows. It is about 55 to 62 miles wide and 320 miles long and bisects the basin in a northeast-southwest direction. The Snake River is the dominant surface-water feature and flows about 453 miles from the southern border of Yellowstone National Park in Wyoming to King Hill, Idaho, where it leaves the basin. The Snake River flows through five reservoirs that provide a total storage capacity of more than 4 million acre-feet. Gravity-flow diversions are predominant in the upper part of the basin and totaled 8.8 million.acre-feet in 1980. Pumped diversions occur mainly in the lower part of the basin and totaled 408,500 acre-feet in 1980. The Snake River Plain aquifer is the predominant ground-water feature in the upper Snake River Basin and underlies the eastern Snake River Plain. The upper 500 feet of the aquifer may store 200 to 300 million acre-feet of water. Ground-water resources that supply agricultural lands are sustained by recharge from surface-water irrigation, precipitation, and tributary inflow. Major ground-water discharges are at springs and seeps or from ground-water pumpage for irrigation. Water use in the basin is dominated by irrigated agriculture, which is the largest consumptive water use in the basin. Major crops in the basin include potatoes, wheat, sugar beets, hay, and barley. Most irrigation needs are supplied from surface-water sources through a series of canals and laterals. In 1990, about 2.5 million acres were irrigated with more than 14.2 million acre-feet of surface and ground water. About 21 percent of the basin is agricultural land and 50 percent is rangeland. Idaho leads the Nation in trout production for commercial sale. Combined mean annual discharges from 12 aquacultural facilities in the basin (1985-90) were about 787,000 acre-feet. These facilities are clustered in a reach of the Snake River between Milner Dam and King Hill where ground-water discharge is from many seeps and springs that provide sufficient quantities of good-quality water. Other facilities that release effluent to the Snake River include 13 municipal wastewater treatment plants and 3 industrial facilities.

Idaho, Wyoming↗

Incidence of pollution, bioaccumulation, biomagnification, and toxic effects of per- and polyfluoroalkyl substances (PFAS) in aquatic ecosystems: A review

Per- and polyfluoroalkyl substances (PFAS) are persistently accumulated in both environmental media and biological systems, leading to significant toxicological effects. Although research on PFAS has expanded in recent years, systematic reviews on its concentration distribution in aquatic environments and biota, as well as its toxicological effects, remain scarce. Moreover, existing literature lacks systematic analyses of diverse aquatic environments and organisms. This review investigates the contamination levels of PFAS in aquatic environments. It also provides a systematic analysis of bioaccumulation in planktonic, swimming, and benthic organisms, including bioaccumulation factors (BAF), biomagnification factors (BMF), trophic magnification factors (TMF), and biota-sediment accumulation factors (BSAF), and evaluates the potential toxic effects on aquatic ecosystems. This study aims to provide theoretical support for the environmental regulation and management of PFAS. Additionally, it seeks to offer data references and potential research directions for future studies, thereby promoting the advancement of PFAS-related research and policy development.

Aquatic Toxicology↗

Investigation into avian mortality in the Playa Lakes region of southeastern New Mexico: Final Report - June 1997

This Final Report is a review of work on a cooperative study undertaken by the USGS Biological Resources Division's National Wildlife Health Center (NWHC) and National Wetlands Research Center (NWRC; formerly the Southern Science Center) from 1994 through 1997. The study was initiated at the request of the Bureau of Land Management (BLM), through a request to the former National Biological Service. The Southeastern New Mexico Playa Lakes Coordinating Committee (SENMPLCC) played an important role in outlining the research needs. The initial Study Plan document, which outlines the background, objectives and methods for the first two years is available as Appendix 1. A letter indicating modifications to the Study Plan was sent to the SENMPLCC chair on April 25,1995, and is Appendix 2. An Interim Report, covering this work was completed and submitted in September 1995. The Literature Review section of the study was completed and presented to SENMPLCC in August, 1995. Following SENMPLCC review, NWHC was asked to develop a series of questions that could be posed from information gained in the initial phase (Appendix 3). The NWHC and NWRC were then directed to begin work to answer the top three questions, within the available fiscal resources. NWRC could continue with work outlined under the original Study Plan (Appendix 1), however an additional Study Plan for experiments performed by NWHC and collaborators and is available as Appendix 4.

New Mexico↗

Changing landscapes and the cosmopolitism of the eastern Colorado avifauna

The avifauna of continental North America has changed dramatically since colonial times. Excessive hunting contributed, at least in part, to the extinction of birds such as the great auk ( Pinguinus impennis ) and passenger pigeon ( Ectopistes migratorius ), while more recently organochlorine insecticide residues have resulted in drastic reductions in numbers of brown pelicans ( Pelecanus occidentalis ) (Anderson et al. 1975) and other species. Generally, however, vertebrate populations change in direct response to changes in their habitats. For example, herring gulls ( Larus argentatus ) have increased in numners (Kadlec and Drury 1968) with urbanization of the New England coastline, in the same locations formerly occupied by the extinct heath hen ( Tympanuchus cupido cupido ). Also, passerine birds of forest interiors have declined in numbers with fragmentation of the eastern deciduous forest into small stands; this fragmentation has led to increases in numbers of edge species (Robbins 1979, Ambuel and Temple 1983). Even subtle community shifts can introduce new competitive processes that can augment population changes among species (Brittingham and Temple 1983). Such studies of broad-scale changes in vegetative communities and their influence on native wildlife species have fostered the recent topical emphasis on "conservation biology" (Soule and Wilcox 1980, Soule 1985) and "landscape ecology" (Burgess and Sharpe 1981, Harris 1984:25-43). As changes in landscapes are causing subtle (but potentially dramatic) changes in the distribution of native species, conservation biologists are finding that mere presence-absence data on populations, or even accurate information on reproductive success, is inadequate to evaluate management activities or environmental perturbations. The principles of "conservation genetics" are attracting interest in the management of natural preserves especially (Schonewald-Cox et al. 1983). Changing patterns in landscape complexion or genetic makeup of a population are difficult to detect locally. Contemporary issues in the conservation of native species demand regional and continental perspectives (Samson and Knopf 1982). Thus, management activities at specific sites are often viewed as short-sighted by planners and conservation critics. This paper illustrates how these contemporary theories can influence a local conservation perspective. That perspective is developed around historical processes that have led to cosmopolitism of the local avifauna on the Colorado Division of Wildlife's South Platte Wildlife Management Area (SPWMA) near Crook, Colorado.

Colorado↗

Use of sand wave habitats by silver hake

Silver hake Merluccius bilinearis are common members of fish communities in sand wave habitats on Georges Bank and on Stellwagen Bank in the Gulf of Maine. Observations of fish size v. sand wave period showed that silver hake are not randomly distributed within sand wave landscapes. Regression analyses showed a significant positive relationship between sand wave period and fish length. Correlation coefficients, however, were low, suggesting other interactions with sand wave morphology, the range of current velocities, and available prey may also influence their distribution. Direct contact with sand wave habitats varied over diel periods, with more fish resting on the seafloor during daytime than at night. Social foraging, in the form of polarized groups of fish swimming in linear formations during crepuscular and daytime periods, was also observed. Sand wave habitats may provide shelter from current flows and mediate fish-prey interactions. ?? 2003 The Fisheries Society of the British Isles.

Gulf of Maine↗

Multidirectional abundance shifts among North American birds and the relative influence of multifaceted climate factors

Shifts in species distributions are major fingerprint of climate change. Examining changes in species abundance structures at a continental scale enables robust evaluation of climate change influences, but few studies have conducted these evaluations due to limited data and methodological constraints. In this study, we estimate temporal changes in abundance from North American Breeding Bird Survey data at the scale of physiographic strata to examine the relative influence of different components of climatic factors and evaluate the hypothesis that shifting species distributions are multidirectional in resident bird species in North America. We quantify the direction and velocity of the abundance shifts of 57 permanent resident birds over 44 years using a centroid analysis. For species with significant abundance shifts in the centroid analysis, we conduct a more intensive correlative analysis to identify climate components most strongly associated with composite change of abundance within strata. Our analysis focus on two contrasts: the relative importance of climate extremes vs. averages, and of temperature vs. precipitation in strength of association with abundance change. Our study shows that 36 species had significant abundance shifts over the study period. The average velocity of the centroid is 5.89 km·yr −1 . The shifted distance on average covers 259 km, 9% of range extent. Our results strongly suggest that the climate change fingerprint in studied avian distributions is multidirectional. Among 6 directions with significant abundance shifts, the northwestward shift was observed in the largest number of species ( n = 13). The temperature/average climate model consistently has greater predictive ability than the precipitation/extreme climate model in explaining strata‐level abundance change. Our study shows heterogeneous avian responses to recent environmental changes. It highlights needs for more species‐specific approaches to examine contributing factors to recent distributional changes and for comprehensive conservation planning for climate change adaptation.

Global Change Biology↗

Delayed herbivory by migratory geese increases summer‐long CO2 uptake in coastal western Alaska

The advancement of spring and the differential ability of organisms to respond to changes in plant phenology may lead to ‘phenological mismatches’ as a result of climate change. One potential for considerable mismatch is between migratory birds and food availability in northern breeding ranges and these mismatches may have consequences for ecosystem function. We conducted a three‐year experiment to examine the consequences for CO 2 exchange of advanced spring green‐up and altered timing of grazing by migratory Pacific black brant in a coastal wetland in western Alaska. Experimental treatments represent the variation in green‐up and timing of peak grazing intensity that currently exists in the system. Delayed grazing resulted in greater net ecosystem exchange (NEE) and gross primary productivity (GPP) while early grazing reduced CO 2 uptake with the potential of causing net ecosystem carbon (C) loss in late spring and early summer. Conversely, advancing the growing season only influenced ecosystem respiration (ER), resulting in a small increase in ER with no concomitant impact on GPP or NEE. The experimental treatment that represents the most likely future, with green‐up advancing more rapidly than arrival of migratory geese, results in NEE changing by 1.2 μmol m −2 s −1 toward a greater CO 2 sink in spring and summer. Increased sink strength, however, may be mitigated by early arrival of migratory geese, which would reduce CO 2 uptake. Importantly, while the direct effect of climate warming on phenology of green‐up has a minimal influence on NEE, the indirect effect of climate warming manifest through changes in the timing of peak grazing can have a significant impact on C balance in northern coastal wetlands. Furthermore, processes influencing the timing of goose migration in the winter range can significantly influence ecosystem function in summer habitats.

Alaska↗

Correlating seabird movements with ocean winds: linking satellite telemetry with ocean scatterometry.

Satellite telemetry studies of the movements of seabirds are now common and have revealed impressive flight capabilities and extensive distributions among individuals and species at sea. Linking seabird movements with environmental conditions over vast expanses of the world's open ocean, however, remains difficult. Seabirds of the order Procellariiformes (e.g., petrels, albatrosses, and shearwaters) depend largely on wind and wave energy for efficient flight. We present a new method for quantifying the movements of far-ranging seabirds in relation to ocean winds measured by the SeaWinds scatterometer onboard the QuikSCAT satellite. We apply vector correlation (as defined by Crosby et al. in J Atm Ocean Tech 10:355-367, 1993) to evaluate how the trajectories (ground speed and direction) for five procellariiform seabirds outfitted with satellite transmitters are related to ocean winds. Individual seabirds (Sooty Shearwater, Pink-footed Shearwater, Hawaiian Petrel, Grey-faced Petrel, and Black-footed Albatross) all traveled predominantly with oblique, isotropic crossing to quartering tail-winds (i.e., 105-165 degrees in relation to birds' trajectory). For all five seabirds, entire track line trajectories were significantly correlated with co-located winds. Greatest correlations along 8-day path segments were related to wind patterns during birds' directed, long-range migration (Sooty Shearwater) as well as movements associated with mega-scale meteorological phenomena, including Pacific Basin anticyclones (Hawaiian Petrel, Grey-faced Petrel) and eastward-propagating north Pacific cyclones (Black-footed Albatross). Wind strength and direction are important factors related to the overall movements that delineate the distribution of petrels at sea. We suggest that vector correlation can be used to quantify movements for any marine vertebrate when tracking and environmental data (winds or currents) are of sufficient quality and sample size. Vector correlation coefficients can then be used to assess population--or species-specific variability and used to test specific hypotheses related to how animal movements are associated with fluid environments.

Marine Biology↗

Ecosystem services of riparian restoration: A review of rock detention structures in the Madrean Archipelago Ecoregion

In northwestern Mexico and the southwestern United States, limited water supplies and fragile landscapes jeopardize world-renowned biological diversity. Simple rock detention structures have been used to manage agricultural water for over a thousand years and are now being installed to restore ecohydrological functionality but with little scientific evidence of their success. The impacts, design, and construction of such structures has been debated among local restoration practitioners, management, and permitting agencies. This article presents archeological documentation, local contentions, and examples of available research assessments of rock detention structures in the Madrean Archipelago Ecoregion. A US Geological Survey study to quantify impacts of rock detention structures using remote-sensing analyses, hydrologic monitoring, vegetation surveys, and watershed modeling is discussed, and results rendered in terms of the critical restoration ecosystem services provided. This framework provides a means for comparing management actions that might directly or indirectly impact human populations and assessing tradeoffs between them.

Arizona, Chihuahua, New Mexico, Sonora↗

A brief history and summary of the effects of river engineering and dams on the Mississippi River system and delta

The U.S. Geological Survey Forecast Mekong project is providing technical assistance and information to aid management decisions and build science capacity of institutions in the Mekong River Basin. A component of this effort is to produce a synthesis of the effects of dams and other engineering structures on large-river hydrology, sediment transport, geomorphology, ecology, water quality, and deltaic systems. The Mississippi River Basin (MRB) of the United States was used as the backdrop and context for this synthesis because it is a continental scale river system with a total annual water discharge proportional to the Mekong River, has been highly engineered over the past two centuries, and the effects of engineering have been widely studied and documented by scientists and engineers. The MRB is controlled and regulated by dams and river-engineering structures. These modifications have resulted in multiple benefits including navigation, flood control, hydropower, bank stabilization, and recreation. Dams and other river-engineering structures in the MRB have afforded the United States substantial socioeconomic benefits; however, these benefits also have transformed the hydrologic, sediment transport, geomorphic, water-quality, and ecologic characteristics of the river and its delta. Large dams on the middle Missouri River have substantially reduced the magnitude of peak floods, increased base discharges, and reduced the overall variability of intraannual discharges. The extensive system of levees and wing dikes throughout the MRB, although providing protection from intermediate magnitude floods, have reduced overall channel capacity and increased flood stage by up to 4 meters for higher magnitude floods. Prior to major river engineering, the estimated average annual sediment yield of the Mississippi River Basin was approximately 400 million metric tons. The construction of large main-channel reservoirs on the Missouri and Arkansas Rivers, sedimentation in dike fields, and protection of channel banks by revetments throughout the basin, have reduced the overall sediment yield of the MRB by more than 60 percent. The primary alterations to channel morphology by dams and other engineering projects have been (1) channel simplification and reduced dynamism; (2) lowering of channel-bed elevation; and (3) disconnection of the river channel from the flood plain, except during extreme flood events. Freshwater discharge from the Mississippi River and its associated sediment and nutrient loads strongly influence the physical and biological components in the northern Gulf of Mexico. Ninety percent of the nitrogen load reaching the Gulf of Mexico is from nonpoint sources with about 60 percent coming from fertilizer and mineralized soil nitrogen. Much of the phosphorus is from animal manure from pasture and rangelands followed by fertilizer applied to corn and soybeans. Increased nutrient enrichment in the northern Gulf of Mexico has resulted in the degradation of water quality as more phytoplankton grow, which increases turbidity and depletes oxygen in the lower depths creating what is known as the "dead zone." In 2002, the dead zone was 22,000 square kilometers (km2), an area similar to the size of the State of Massachusetts. Changes in the flow regime from engineered structures have had direct and indirect effects on the fish communities. The navigation pools in the upper Mississippi River have aged, and these overwintering habitats, which were created when the pools filled, have declined as sedimentation reduces water depth. Reproduction of paddlefish may have been adversely affected by dams, which impede access to suitable spawning habitats. Fishes that inhabit swift-current habitats in the unimpounded lower Mississippi River have not declined as much as in the upper Mississippi River. The decline of the pallid sturgeon may be attributable to channelization of the Missouri River above St. Louis, Missouri. The Missouri River supports a rich fish community and remains relatively intact. Nevertheless, the widespread and long history of human intervention in river discharge has contributed to the declines of about 25 percent of the species. The Mississippi River Delta Plain is built from six delta complexes composed of a massive area of coastal wetlands that support the largest commercial fishery in the conterminous United States. Since the early 20th century, approximately 4,900 km2 of coastal lands have been lost in Louisiana. One of the primary mechanisms of wetland loss on the Plaquemines-Balize complex is believed to be the disconnection of the river distributary network from the delta plain by the massive system of levees on the delta top, which prevent overbank flooding and replenishment of the delta top by sediment and nutrient deliveries. Efforts by Federal and State agencies to conserve and restore the Mississippi River Delta Plain began over three decades ago and have accelerated over the past decade. Regardless of these efforts, however, land losses are expected to continue because the reduced upstream sediment supplies are not sufficient to keep up with the projected depositional space being created by the combined forces of delta plain subsidence and global sea-level rise.

Alabama;Alberta;Arkansas;Colorado;Georgia;Illinois↗

Of elephants and blind men: Deer management in the U.S. National Parks

Overabundant populations of white-tailed deer ( Odocoileus virginianus ) are becoming common in the eastern United States. Faced with burgeoning deer populations in eastern parks, the National Park Service (NPS) formulated policy based on its long experience with ungulate management in western parks. That the NPS failed to find a management solution acceptable to its many constituencies was inevitable. Like blind men touching different parts of an elephant and disagreeing about its form, those engaged in the debate about deer management in parks are viewing different parts of the ecological system. None has seen the entire system, and consequently, there is neither common agreement on the nature of the problem nor on the solutions. We explore the quandary of deer management in eastern parks by addressing three questions: (1) Can the National Park Service reconcile its management goals with those of its neighbors? (2) Can thresholds be identified for determining when to intervene in natural processes? (3) Is there a scientific foundation for proceeding with effective management of deer? We argue that reconciling the NPS management with that of state conservation agencies is not possible because management policy guides these agencies in opposite directions: the NPS is charged with limiting human impact on ecological processes, and state agencies are charged with exerting human control over population abundance. Questions about thresholds and a scientific basis for management arise from concern that irrupting deer populations are a manifestation of disrupted natural processes. Several population growth paradigms are at the heart of this ecological question. The science provides no consensus about which of these paradigms are appropriate to deer in eastern ecosystems. Thus, it is premature to expect science to identify if or when natural processes have been disrupted. While the NPS cannot effectively achieve its goals without better science, neither can it wait for science to fully understand the dynamics of plant–herbivore interactions. The best hope for resolving both the biological and political dilemmas surrounding deer management is through an adaptive management approach.

Ecological Applications↗

Chronic wasting disease detection and mortality sources in semi-protected deer population

Surveillance for wildlife diseases is essential for assessing population dynamics of ungulates, especially in free-ranging populations where infected animals are difficult to sample. Chronic wasting disease (CWD) is an emerging infectious disease of concern because of the potential for substantial negative effects on populations of cervids. Variability in the likelihood that CWD is detected could invalidate traditional estimators for prevalence. In some instances, deer located after death cannot be tested for infectious diseases, including CWD, because of lack of availability or condition of appropriate tissues. We used various methods to detect infectious diseases that could cause mortality for deer Odocoileus spp. residing in Wind Cave National Park, South Dakota, USA, and we report survival estimates for animals in this population. We included 34 monthly encounters of deer resightings and 67 mortalities. We tested live deer by tonsillar biopsy for CWD and estimated pooled prevalence (mean ± SE) at 5.6 ± 3.0% over the three-year study. Live deer potentially had exposure to several infectious diseases, including bluetongue, epizootic hemorrhagic disease, bovine viral diarrhea, West Nile virus, and malignant catarrhal fever, but no apparent morbidity or mortality from those diseases. We tested survival and influence of covariates, including age and sex, using known-fate analysis in Program MARK. Those data best supported a model with time-invariant encounter probability and an annual survival of 72.8%. Even without direct pressure from hunting within the park, average life expectancy in this population was 3.2 years. Only 68% of mortalities contained sufficient material for CWD sampling (because of predation and scavenger activity) and >42% of these were CWD-positive. These findings underscore the possible biases in postmortem surveillance estimates of disease prevalence because of potential for subclinical infected animals to be removed by predators and not tested.

South Dakota↗

Fungal life-styles and ecosystem dynamics: Biological aspects of plant pathogens, plant endophytes and saprophytes

This chapter discusses various biochemical, genetic, ecological, and evolutionary aspects of fungi that express either symbiotic or saprophytic life-styles. An enormous pool of potential pathogens exists in both agricultural and natural ecosystems, and virtually all plant species are susceptible to one or more fungal pathogens. Fungal pathogens have the potential to impact on the genetic structure of populations of individual plant species, the composition of plant communities and the process of plant succession. Endophytic fungi exist for at least part of their life cycles within the tissues of a plant host. This group of fungi is distinguished from plant pathogens because they do not elicit significant disease symptoms. However, endophytes do maintain the genetic and biochemical mechanisms required for infection and colonization of plant hosts. Fungi that obtain chemical nutrients from dead organic matter are known as saprophytes and are critical to the dynamics and resilience of ecosystems. There are two modes of saprophytic growth: one in which biomolecules that are amenable to transport across cell walls and membranes are directly absorbed, and another in which fungi must actively convert complex biopolymers into subunit forms amenable to transportation into cells. Regardless of life-style, fungi employ similar biochemical mechanisms for the acquisition and conversion of nutrients into complex biomolecules that are necessary for vegetative growth, production and dissemination of progeny, organismal competition, and survival during periods of nutrient deprivation or environmental inclemency.

Advances in Botanical Research↗