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USGS2007

Data for a regional approach to the development of an effects-based nutrient criterion for wadable streams

States are required by the U.S. Environmental Protection Agency to establish nutrient criteria (concentrations of nutrients above which water quality is deteriorated) as part of their water-quality regulations. A study of wadable streams in the Mid-Atlantic Region was undertaken by the U.S. Geological Survey, the U.S. Environmental Protection Agency, and the Maryland Department of the Environment, with assistance from the Pennsylvania Department of Environmental Protection, to help define current concentrations of nutrients in streams with the goal of associating different nutrient-concentration levels with their effects on water quality. During the summers of 2004 and 2005, diel concentrations of dissolved oxygen, nutrient concentrations, concentrations of chlorophyll a in attached algae, and algal-community structure were measured at 46 stream sites in Maryland, Pennsylvania, Virginia, and West Virginia. Data from this work can be used by individual state agencies to define nutrient criteria. Quality-control measures for the study included submitting blank samples, duplicate samples, and reference samples for analysis of nutrients, total organic carbon, chlorophyll a, and algal biomass. Duplicate and split samples were submitted for periphyton identifications. Three periphyton split samples were sent to an independent lab for a check on periphyton identifications. Neither total organic carbon nor nutrients were detected in blank samples. Concentrations of nutrients and total organic carbon were similar for most duplicate sample pairs, with the exception of a duplicate pair from Western Run. Concentrations of ammonia plus organic nitrogen for this duplicate pair differed by as much as 34 percent. Total organic carbon for the duplicate pair from Western Run differed by 102 percent. The U.S. Geological Survey National Water Quality Laboratory performance on the only valid reference sample submitted was excellent; the relative percent difference values were no larger than 5 percent for any constituent analyzed. For periphyton identifications, duplicate samples had Jaccard Coefficient of Community values slightly greater than 0.5. This indicates the periphyton sampling protocol used provided a sample that was only moderately reproducible. Jaccard Coefficients for three periphyton samples split between two independent labs were 0.2, 0.11, and 0.08. These very low values suggest a poor concurrence on species identifications performed by the two labs. As a result of these quality-control samples, the slides prepared for diatom identifications were sent to the Academy of Natural Sciences for re-identification. Caution is urged when interpreting periphyton-community information from this study. This report and the raw data from the study are available online at http://pubs.usgs.gov/ds257

Maryland, Pennsylvania, Virginia, West Virginia↗

USGS2013

Modeling for the SAFRR Tsunami Scenario-generation, propagation, inundation, and currents in ports and harbors: Chapter D in The SAFRR (Science Application for Risk Reduction) Tsunami Scenario

This U.S. Geological Survey (USGS) Open-File report presents a compilation of tsunami modeling studies for the Science Application for Risk Reduction (SAFRR) tsunami scenario. These modeling studies are based on an earthquake source specified by the SAFRR tsunami source working group (Kirby and others, 2013). The modeling studies in this report are organized into three groups. The first group relates to tsunami generation. The effects that source discretization and horizontal displacement have on tsunami initial conditions are examined in section 1 (Whitmore and others). In section 2 (Ryan and others), dynamic earthquake rupture models are explored in modeling tsunami generation. These models calculate slip distribution and vertical displacement of the seafloor as a result of realistic fault friction, physical properties of rocks surrounding the fault, and dynamic stresses resolved on the fault. The second group of papers relates to tsunami propagation and inundation modeling. Section 3 (Thio) presents a modeling study for the entire California coast that includes runup and inundation modeling where there is significant exposure and estimates of maximum velocity and momentum flux at the shoreline. In section 4 (Borrero and others), modeling of tsunami propagation and high-resolution inundation of critical locations in southern California is performed using the National Oceanic and Atmospheric Administration’s (NOAA) Method of Splitting Tsunami (MOST) model and NOAA’s Community Model Interface for Tsunamis (ComMIT) modeling tool. Adjustments to the inundation line owing to fine-scale structures such as levees are described in section 5 (Wilson). The third group of papers relates to modeling of hydrodynamics in ports and harbors. Section 6 (Nicolsky and Suleimani) presents results of the model used at the Alaska Earthquake Information Center for the Ports of Los Angeles and Long Beach, as well as synthetic time series of the modeled tsunami for other selected locales in southern California. Importantly, section 6 provides a comparison of the effect of including horizontal displacements at the source described in section 1 and differences in bottom friction on wave heights and inundation in the Ports of Los Angeles and Long Beach. Modeling described in section 7 (Lynett and Son) uses a higher order physical model to determine variations of currents during the tsunami and complex flow structures such as jets and eddies. Section 7 also uses sediment transport models to estimate scour and deposition of sediment in ports and harbors—a significant effect that was observed in southern California following the 2011 Tohoku tsunami. Together, all of the sections in this report form the basis for damage, impact, and emergency preparedness aspects of the SAFRR tsunami scenario. Three sections of this report independently calculate wave height and inundation results using the source specified by Kirby and others (2013). Refer to figure 29 in section 3, figure 52 in section 4, and figure 62 in section 6. All of these results are relative to a mean high water (MHW) vertical datum. Slight differences in the results are observed in East Basin of the Port of Los Angeles, Alamitos Bay, and the Seal Beach National Wildlife Refuge. However, given that these three modeling efforts involved different implementations of the source, different numerical wave propagation and runup models, and slight differences in the digital elevation models (DEMs), the similarity among the results is remarkable.

California↗

USGS1998

Evaluation of geophysical logs and video surveys in boreholes adjacent to the Berkley Products Superfund Site, West Cocalico Township, Lancaster County, Pennsylvania

Between February 1998 and April 1998, geophysical logs were collected in nine boreholes adjacent to the Berkley Products Superfund Site, West Cocalico Township, Lancaster County, Pa. Video surveys were conducted on four of the nine boreholes. The boreholes range in depth from 320 to 508 feet below land surface, are completed open holes, have ambient vertical flow of water, and penetrate a series of interbedded siltstone, sandstone, and conglomerate units. The purpose of collecting geophysical-log data was to help determine horizontal and vertical distribution of contaminated ground water migrating from known or suspected sources and to aid in the placement of permanent borehole packers. The primary contaminants were derived from paint waste that included pigment sludges and wash solvents. The chlorinated volatile organic compounds probably originated from the wash solvents. Caliper logs and video surveys were used to locate fractures; inflections on fluid-resistivity and fluid-temperature logs were used to locate possible water-bearing fractures. Heatpulse-flowmeter measurements were used to verify the locations of water-producing or water-receiving zones and to measure rates of flow between water-bearing fractures. Single-point-resistance and natural-gamma logs provided information on stratigraphy. After interpretation of geophysical logs, video surveys, and driller's logs, permanent multiple-packer systems were installed in each borehole to obtain depth specific water samples from one or more water-bearing fractures in each borehole.

Pennsylvania↗

USGS2021

Nearshore water quality and coral health indicators along the west coast of the Island of Hawaiʻi, 2010–2014

Coral reefs worldwide are experiencing rapid degradation in response to climate and land-use change, namely effects of warming sea-surface temperatures, contaminant runoff, and overfishing. Extensive coral bleaching caused by the steady rise of sea-surface temperatures is projected to increase, but our understanding and ability to predict where corals may be most resilient to this effect is limited owing to a lack of knowledge of nearshore habitat conditions and the role of compromised coral health in preconditioning bleaching vulnerability. On high islands and most atolls, fresh to brackish groundwater discharges to the coast through the beach face and seafloor, where it mixes with marine waters and commonly creates cool estuarine nearshore waters that are important to wildlife and ecosystem services that benefit people. Here, we summarize results of a study to evaluate the ecosystem services and effects of groundwater on coral reef health and the potential role of groundwater to maintain cold-water refugia that can buffer corals from thermal stress during temperature maxima. Across 75 kilometers of the west coastline of the Island of Hawaiʻi, paired time-series and discrete measurements of water quality, coral-community and colony size structures, and coral health indicators, including bleaching, at 33 stations grouped into 12 study areas were made from July 2010 to December 2013. The results show that nearshore water temperatures are depressed by groundwater across extensive areas of the nearshore. Persistent cold-water refugia ranging from 1 to 5 degrees Celsius below surrounding marine water temperatures are shown to be associated with identified groundwater inputs. Significant correlations were found between metrics of coral health and water temperature. Because areas of temperature refugia were notable along the west coast of the Island of Hawaiʻi and are identified by ecologists as increasingly important to valued wildlife, improved understanding of groundwater flux to the long-term resilience of coral reefs is likely important. In particular, evaluating the extent that the magnitude and timing of groundwater discharge across the nearshore mitigate thermal bleaching stress may help inform the fate of coral reefs projected to experience rising sea-surface temperatures worldwide.

Hawaii↗

USGS1903

Instructions relating to the work of the United States Geological Survey to take effect May 1, 1903

On March 3, 1900, a series of instructions relating to the work of the topographic branch of the Geological Survey was approved and published in pamphlet form. The extensive use of this publication by those engaged in topographic work and others exhausted the first edition and seemed to justify its enlargement so that it would cover the field and office work of the Survey generally. The instructions now published have been adopted after full consultation and consideration, so that they may be regarded as embodying the latest and best information on the various subjects treated. They should be carefully studied by the members of the Geological Survey, as a strict compliance with all the provisions is expected. These "Instructions" are supplementary to the manual of "Regulations," third edition, 1903.

Report↗

USGS2009

Benthic flux of nutrients and trace metals in the northern component of San Francisco Bay, California

Two sets of sampling trips were coordinated in late summer 2008 (weeks of July 8 and August 6) to sample the interstitial and overlying bottom waters at 10 shallow locations (9 sites <3 meters in depth) within the northern component of the San Francisco Bay/Delta (herein referred to as North Bay). The work was performed to better understand sources of biologically reactive solutes (namely, dissolved macronutrients and trace metals) that may affect the base of the food web in this part of the estuary. A nonmetallic pore-water profiler was used to obtain the first centimeter-scale estimates of the vertical solute-concentration gradients for diffusive-flux determinations. This study, performed in collaboration with scientists from San Francisco State University?s Romberg Tiburon Center for Environmental Studies, provides information to assist in developing and refining management strategies for the Bay/Delta system and supports efforts to monitor changes in food-web structure associated with regional habitat modifications directed by the California Bay-Delta Authority. On July 7, 2008, and August 5, 2008, pore-water profilers were successfully deployed at six North Bay sites per trip to measure the concentration gradient of dissolved macronutrients and trace metals near the sediment-water interface. Only two of the sites (433 and SSB009 within Honker Bay) were sampled in both series of profiler deployments. At each sampling site, profilers were deployed in triplicate, while discrete samples and dataloggers were used to collect ancillary data from both the water column and benthos to help interpret diffusive-flux measurements. Benthic flux of dissolved (0.2-micron filtered) inorganic phosphate (that is, soluble reactive phosphorus (SRP)) ranged from negligible levels (-0.003?0.005 millimole per square meter per day (mmole m-2d-1) at Site 4.1 outside Honker Bay) to 0.060?0.006 mmole m-2d-1 near the northern coast of Brown?s Island. Except for the elevated flux at Browns Island, the benthic flux of soluble reactive phosphorus (SRP) was consistently: (1) lower than previously reported for South Bay sites, (2) an order of magnitude lower than oligotrophic Coeur d?Alene Lake, (3) two orders of magnitude lower than determined for eutrophic Upper Klamath Lake, and (4) an order of magnitude or more lower than the estimated summer riverine inputs for SRP (900 to 1,300 kilograms of phosphorous per day (kg-P d-1)). In contrast to fluxes reported for the South Bay, nitrate fluxes were consistently negative (that is, drawn from the water column into the sediment), except for one site with statistically insignificant nitrate fluxes (Site 409 within Suisun Bay). The most negative nitrate flux (-7.3?0.1 mmole m-2d-1) was observed within Grizzly Bay (Site 416). Observed nitrate fluxes bracketed the estimated summer fluvial flux of nitrate (3,500 to 5,000 kg-N d-1). With the exception of the two Grizzly Bay sites (416 and 417), the consistently positive benthic flux of ammonia generally counteracted the negative flux of nitrate to yield a net balance of dissolved inorganic nitrogen. Ammonia benthic fluxes extrapolated for Suisun Bay ranged from 320 kg-N d-1 (Site SSB009 near the entrance to Honker Bay) to 1,900 kg-N d-1 (Montezuma Island). These values represent a significant ammonia source to the water column relative to summer riverine inputs (approximately 400 to 600 kg-N d-1). Dissolved silica also displayed a consistently positive benthic flux, except for Site 409 within Suisun Bay, which showed insignificant fluxes (also insignificant for nitrate and SRP). As with the nitrate fluxes, Grizzly Bay and Browns Island sites yielded the highest dissolved silica fluxes (1.3?1.2 to 2.5?0.6 mmole m-2d-1, respectively). These initial diffusive-flux estimates are greater than those measured in the South Bay using core-incubation experiments, which include bioturbation and bioirrigation effects, but they are nevertheless probably one to t

Open-File Report↗

USGS2000

Environmental Contaminants and Terrestrial Vertebrates: Effects on Populations, Communities, and Ecosystems

The desire of resource managers, risk assessors, and the general public to better understand the consequences of environmental contamination has produced a strong and growing need for information on the effects of contaminants on populations and groups of species, and over moderate to large areas of land or water. However, the problems associated with research involving populations and groups of species or large and complex geographic areas, especially in terrestrial environments, are well known within the scientific community. With the previous thoughts in mind, an interactive symposium was held at the University of Maryland in October 1998. The purpose of the symposium was to review and critically evaluate our understanding of the effects of contaminants on terrestrial vertebrates at levels of organization above that of the individual. Invited background and technical presentations provided a common baseline of information for symposium participants. Discussion groups were then asked to critically evaluate the topics of two technical sessions. Several presentations of recent or ongoing research provided participants with examples of current approaches to assessments of the effects of contaminants on terrestrial vertebrates at the population or higher level of organization. The book consists of 10 chapters written by presenters at the symposium and three chapters conveying the reports of discussion group.

SETAC Special Publications Series.↗

USGS2006

A database of lotic invertebrate traits for North America

The assessment and study of stream communities may be enhanced if functional characteristics such as life-history, habitat preference, and reproductive strategy were more widely available for specific taxa. Species traits can be used to develop these functional indicators because many traits directly link functional roles of organisms with controlling environmental factors (for example, flow, substratum, temperature). In addition, some functional traits may not be constrained by taxonomy and are thus applicable at multiple spatial scales. Unfortunately, a comprehensive summary of traits for North American invertebrate taxa does not exist. Consequently, the U.S. Geological Survey's National Water-Quality Assessment Program in cooperation with Colorado State University compiled a database of traits for North American invertebrates. A total of 14,127 records for over 2,200 species, 1,165 genera, and 249 families have been entered into the database from 967 publications, texts and reports. Quality-assurance procedures indicated error rates of less than 3 percent in the data entry process. Species trait information was most complete for insect taxa. Traits describing resource acquisition and habitat preferences were most frequently reported, whereas those describing physiological tolerances and reproductive biology were the least frequently reported in the literature. The database is not exhaustive of the literature for North American invertebrates and is biased towards aquatic insects, but it represents a first attempt to compile traits in a web-accessible database. This report describes the database and discusses important decisions necessary for identifying ecologically relevant, environmentally sensitive, non-redundant, and statistically tractable traits for use in bioassessment programs.

Data Series↗

USGS2015

Digital representation of oil and natural gas well pad scars in southwest Wyoming: 2012 update

The recent proliferation of oil and natural gas energy development in the Greater Green River Basin of southwest Wyoming has accentuated the need to understand wildlife responses to this development. The location and extent of surface disturbance that is created by oil and natural gas well pad scars are key pieces of information used to assess the effects of energy infrastructure on wildlife populations and habitat. A digital database of oil and natural gas pad scars had previously been generated from 1-meter (m) National Agriculture Imagery Program imagery (NAIP) acquired in 2009 for a 7.7-million hectare (ha) (19,026,700 acres) region of southwest Wyoming. Scars included the pad area where wellheads, pumps, and storage facilities reside and the surrounding area that was scraped and denuded of vegetation during the establishment of the pad. Scars containing tanks, compressors, the storage of oil and gas related equipment, and produced-water ponds were also collected on occasion. This report updates the digital database for the five counties of southwest Wyoming (Carbon, Lincoln, Sublette, Sweetwater, Uinta) within the Wyoming Landscape Conservation Initiative (WLCI) study area and for a limited portion of Fremont, Natrona, and Albany Counties using 2012 1-m NAIP imagery and 2012 oil and natural gas well permit information. This report adds pad scars created since 2009, and updates attributes of all pad scars using the 2012 well permit information. These attributes include the origination year of the pad scar, the number of active and inactive wells on or near each pad scar in 2012, and the overall status of the pad scar (active or inactive). The new 2012 database contains 17,404 pad scars of which 15,532 are attributed as oil and natural gas well pads. Digital data are stored as shapefiles projected to the Universal Transverse Mercator (zones 12 and 13) coordinate system. These data are available from the U.S. Geological Survey (USGS) at http://dx.doi.org/10.3133/ds934.

Wyoming↗

USGS2013

A compilation of U.S. Geological Survey pesticide concentration data for water and sediment in the Sacramento–San Joaquin Delta region: 1990–2010

Beginning around 2000, abundance indices of four pelagic fishes (delta smelt, striped bass, longfin smelt, and threadfin shad) within the San Francisco Bay and Sacramento–San Joaquin Delta began to decline sharply (Sommer and others, 2007). These declines collectively became known as the pelagic organism decline (POD). No single cause has been linked to this decline, and current theories suggest that combinations of multiple stressors are likely to blame. Contaminants (including current-use pesticides) are one potential stressor being investigated for its role in the POD (Anderson, 2007). Pesticide concentration data collected by the U.S. Geological Survey (USGS) at multiple sites in the delta region over the past two decades are critical to understanding the potential effects of current-use pesticides on species of concern as well as the overall health of the delta ecosystem. In April 2010, a compilation of contaminant data for the delta region was published by the State Water Resources Control Board (Johnson and others, 2010). Pesticide occurrence was the major focus of this report, which concluded that “there was insufficient high quality data available to make conclusions about the potential role of specific contaminants in the POD.” The report cited multiple sources; however, data collected by the USGS were not included in the publication even though these data met all criteria listed for inclusion in the report. What follows is a summary of publicly available USGS data for pesticide concentrations in surface water and sediments within the Sacramento–San Joaquin Delta region from the years 1990 through 2010. Data were retrieved though the USGS National Water Information System (NWIS) database, a publicly available online-data repository (U.S. Geological Survey, 1998), and from published USGS reports (also available online at http://pubs.er.usgs.gov/). The majority of the data were collected in support of two long term USGS monitoring programs—National Water Quality Assessment Program (NAWQA; http://water.usgs.gov/ nawqa/) and National Stream Quality Accounting Network (NASQAN; http://water.usgs.gov/nasqan/)—and through projects associated with the USGS Toxics Substances Hydrology Program (http://toxics.usgs.gov/). In addition, data were collected during multiple research projects that were supported by various federal, state, and local agencies. Although these data have been previously published in some form, it is hoped that by focusing on samples collected within the delta region and presenting these data in a concise format, they will be a valuable resource for scientists, resource managers, and members of the public working to understand the role of pesticides in the POD and their potential effects on the overall health of the delta ecosystem.

California↗

USGS2015

Stream geomorphic and habitat data from a baseline study of Underwood Creek, Wisconsin, 2012

Geomorphic and habitat data were collected along Underwood Creek as part of a larger study of stream water quality conditions in the greater Milwaukee, Wisconsin, area. The data were collected to characterize baseline physical conditions in Underwood Creek prior to a potential discharge of wastewater return flow to the stream from the city of Waukesha, Wis. Geomorphic and habitat assessments were conducted in the summer and fall of 2012 by the U.S. Geological Survey (USGS) in cooperation with the Milwaukee Metropolitan Sewerage District. The assessments used a transect based, reach scale assessment at a total of eight reaches—six reaches along Underwood Creek and two reaches along the Menomonee River upstream and downstream of its confluence with Underwood Creek. The reach scale assessment was an updated version of the USGS National Water Quality Assessment Program habitat assessment integrated with an intensive geomorphic assessment. Channel cross sections and longitudinal profiles were surveyed along each of the eight reaches, and discharge and water temperature were measured. Additionally, a geomorphic river walk-through was completed along a 10 kilometer reach that spanned the individual assessment reaches and the sections of channel between them. The assessments and river walk-through described channel and bank stability, channel shape and size, sediment and riparian conditions along these areas of Underwood Creek and the Menomonee River. Since the time of the data collection, focus has turned to other Lake Michigan tributary watersheds for possible Waukesha return-flow discharges; however, the data collected for this effort remains a valuable asset for the baseline characterization, design, and prioritization of planned stream rehabilitation activities in Underwood Creek. The data files presented in this report include a variety of formats including geographic information system files, spreadsheets, photos, and scans of field forms. A subset of habitat-specific data collected during the baseline study can be retrieved through USGS BioData https://aquatic.biodata.usgs.gov/landing.action .

Wisconsin↗

USGS1977

Map showing general availability of ground water in the Kaiparowits coal-basin area, Utah

This is one of a series of maps that describe the geology and related natural resources in the Kaiparowits coal-basin area. This map is based partly on records of water wells, springs, and coal and petroleum exploration holes, partly on unpublished reports of field evaluations of prospective stock-water well sites by personnel of the U.S. Geological Survey, and partly on a 6-day field reconnaissance by the writer in parts of the mapped area. Most of the data used to compile this map were collected by the U.S. Geological Survey in cooperation with State, local, and other Federal agencies. Published sources of data included Phoenix (1963), Iorns, Hembree, and Phoenix (1964), Cooley (1965), Feltis (1966), Goode (1966, 1969), and the final environmental impact statement for the proposed Kaiparowits power project (U.S. Bureau of Land Management, 1976). Few data about the availability or depth of ground water could be obtained for large areas in the Kaiparowits coal basin. In those areas, expected yields of individual wells are inferred from the geology as compiled by Stokes (1964) and Hackman and Wyant (1973), and depths of ground water in wells are inferred largely from the local topography. El Paso Natural Gas Co., Resources Co., Kaiser Engineers, and Southern California Edison Co. provided specific information regarding the availability and depth of ground water in their exploratory holes on the Kaiparowits Plateau. The cooperation of those firms is gratefully acknowledged.

Utah↗

USGS2018

Long Island South Shore Estuary Reserve Coordinated Water Resources Monitoring Strategy

Executive Summary The Long Island South Shore Estuary Reserve Coordinated Water Resources Monitoring Strategy (CWRMS) provides an overview of the water-quality and ecological monitoring within the Reserve and presents suggestions from stakeholders for future data collection, data management, and coordination among monitoring programs. The South Shore Estuary Reserve, hereafter referred to as the Reserve, is a 173-square-mile network of bays and tributaries shaped by the south shore of Long Island (New York) and the barrier islands that was formed as a result of the last ice age (roughly 18,000 years ago). This overview and coordination document is based on information assembled from a series of meetings, a workshop, and individual correspondences with the CWRMS Project Advisory Committee, which was formed in 2015 to help guide the creation of the document, which reflects the current (2017) status of the Reserve and the need for additional data to address its water-quality issues and ecological health and to respond to a changing climate. The U.S. Geological Survey (USGS), in cooperation with the New York State Department of State Office of Planning, Development and Community Infrastructure and the South Shore Estuary Reserve Office, compiled information and recommendations to help stakeholders efficiently evaluate waters currently being monitored and address areas where necessary data are lacking. Water-quality monitoring in the Reserve is ongoing on the Federal, State, and local levels, and coordination among the various programs administered by the U.S. Environmental Protection Agency; National Oceanic and Atmospheric Administration; USGS; Shinnecock Tribal Nation; New York State; Nassau and Suffolk Counties; the Towns of Hempstead, Oyster Bay, Babylon, Islip, Brookhaven, and Southampton; and local universities and nonprofit organizations is necessary to ensure cooperation and efficient use of limited resources. Proper collection and archival of data are critical to the usability of data and methods—a sample of available repositories for monitoring data are provided in this report. Equally important are quality assurances of data and proper techniques of archival such that water and ecological data are collected and analyzed in a consistent manner, regardless of their sources, and that differences in methodologies are identified that might result in discrepancies in the compiled data. Details on monitoring programs, data gaps that are perceived by stakeholders and researchers in the area, and Project Advisory Committee recommendations are provided in this report to promote discussion and coordination. In most cases, resources to fill data gaps are needed, and the use of citizen science volunteers has been shown to help extend programs and provide insight into previously unaddressed areas of concern. This document, in conjunction with the CWRMS website and interactive mapper, is intended to inform the latest iteration of the Comprehensive Management Plan for the Reserve. Moreover, resource managers can use the CWRMS and mapper to identify areas of potential overlap and initiate conversations with stakeholders about addressing needs for additional monitoring of water quality and ecological health in the bays and tributaries of the Reserve.

New York↗

USGS2007

Enhanced Historical Land-Use and Land-Cover Data Sets of the U.S. Geological Survey

Historical land-use and land-cover data, available from the U.S. Geological Survey (USGS) for the conterminous United States and Hawaii, have been enhanced for use in geographic information systems (GIS) applications. The original digital data sets were created by the USGS in the late 1970s and early 1980s and were later converted by USGS and the U.S. Environmental Protection Agency (USEPA) to a geographic information system (GIS) format in the early 1990s. These data were made available on USEPA's Web site since the early 1990s and have been used for many national applications, despite minor coding and topological errors. During the 1990s, a group of USGS researchers made modifications to the data set for use in the National Water-Quality Assessment Program. These edited files have been further modified to create a more accurate, topologically clean, and seamless national data set. Several different methods, including custom editing software and several batch processes, were applied to create this enhanced version of the national data set. The data sets are included in this report in the commonly used shapefile and Tagged Image Format File (TIFF) formats. In addition, this report includes two polygon data sets (in shapefile format) representing (1) land-use and land-cover source documentation extracted from the previously published USGS data files, and (2) the extent of each polygon data file.

Data Series↗

USGS2008

Algal Attributes: An Autecological Classification of Algal Taxa Collected by the National Water-Quality Assessment Program

Algae are excellent indicators of water-quality conditions, notably nutrient and organic enrichment, and also are indicators of major ion, dissolved oxygen, and pH concentrations and stream microhabitat conditions. The autecology, or physiological optima and tolerance, of algal species for various water-quality contaminants and conditions is relatively well understood for certain groups of freshwater algae, notably diatoms. However, applications of autecological information for water-quality assessments have been limited because of challenges associated with compiling autecological literature from disparate sources, tracking name changes for a large number of algal species, and creating an autecological data base from which algal-indicator metrics can be calculated. A comprehensive summary of algal autecological attributes for North American streams and rivers does not exist. This report describes a large, digital data file containing 28,182 records for 5,939 algal taxa, generally species or variety, collected by the U.S. Geological Survey?s National Water-Quality Assessment (NAWQA) Program. The data file includes 37 algal attributes classified by over 100 algal-indicator codes or metrics that can be calculated easily with readily available software. Algal attributes include qualitative classifications based on European and North American autecological literature, and semi-quantitative, weighted-average regression approaches for estimating optima using regional and national NAWQA data. Applications of algal metrics in water-quality assessments are discussed and national quartile distributions of metric scores are shown for selected indicator metrics.

Data Series↗

USGS1986

Example evaluation of a permit application for a proposed hazardous-waste landfill in eastern Adams County, Colorado

A project was undertaken by the U.S. Geological Survey in cooperation with the U. S. Environmental Protection Agency to demonstrate methods by which RCRA (Resources Conservation and Recovery Act of 1976) Part B permit applications might be evaluated. The purpose of the project was to prepare a report that would supplement a series of case studies to be made available to permit writers in the U.S. Environmental Protection Agency. Four sites in the United States were chosen for their potential applicability to geologically similar sites. The Adams County, Colorado, site was chosen to be representative of sites in the Upper Cretaceous Pierre Shale. The intent of this report is to provide an example of how available earth-science information might be used in evaluating an application and not to evaluate the acceptability of the site. Because this study is an evaluation of a permit application, the data used are limited to the data supplied in the application and in published reports. Of the five criteria required by the U.S. Environmental Protection Agency to be addressed in the permit application considered in the case study, the application was evaluated to be inadequate in addressing three criteria: (1) Site characterization, (2) ability to monitor the location, and (3) flow paths and 100-foot time of travel. Details of the inadequacies and a description of the information needed to eliminate the inadequacies are included in the report. (USGS)

Water-Resources Investigations Report↗

USGS2005

Archive of digital Boomer seismic reflection data collected during USGS Cruise 94CCT02, south-central South Carolina coastal region, August 1994

In August of 1994, the U.S. Geological Survey, in cooperation with Coastal Carolina University, conducted marine geophysical surveys in numerous water bodies adjacent to the south-central South Carolina coastal region. Data were collected aboard the MS Coastal in the Ashley, North Edisto, Wadmalaw, Dawho, South Edisto, and Ashepoo Rivers; the Wappoo, North, Steamboat, Bohicket, and Toogoodoo Creeks; Charleston Harbor; Wadmalaw Sound; Fenwick Cut; and the Atlantic Ocean from offshore Isle of Palms to Kiawah Island. This report serves as an archive of unprocessed digital boomer seismic reflection data, trackline maps, navigation files, GIS information, observers' logbooks, Field Activity Collection System (FACS) logs, and FGDC metadata. Filtered and gained digital images of the seismic profiles are also provided. The archived trace data are in standard Society of Exploration Geophysicists (SEG) SEG-Y format (Barry and others, 1975) and may be downloaded and processed with commercial or public domain software such as Seismic Unix (SU). Example SU processing scripts and USGS software for viewing the SEG-Y files (Zihlman, 1992) are also provided.

Data Series↗

USGS2015

Wind River subbasin restoration: Annual report of U.S. Geological Survey activities January 2014 through December 2014

Executive Summary The Wind River subbasin in southwest Washington State provides habitat for a population of wild Lower Columbia River steelhead Oncorhynchus mykiss , which are listed as threatened under the Endangered Species Act. No hatchery steelhead have been planted in the Wind River subbasin since 1994, and hatchery adults are estimated to be less than one percent of adults in any year (Thomas Buehrens, Washington Department of Fish and Wildlife, personal communication). Numerous restoration actions have been implemented in the subbasin, including the removal of Hemlock Dam on Trout Creek in 2009. We used Passive Integrated Transponder (PIT) tagging and a series of instream PIT-tag interrogation systems (PTIS) to investigate life-histories, populations, and efficacy of habitat restoration actions for these steelhead. Data from our study, and companion work by Washington Department of Fish and Wildlife (WDFW), will contribute to Bonneville Power Administration’s (BPA) Research Monitoring and Evaluation (RM&E) Program Strategy of Fish Population Status Monitoring ( www.cbfish.org/ProgramStrategy.mvc/ViewProgramStrategySummary/1 ), specifically the sub-strategies of: 1) Assessing the Status and Trends of Diversity of Natural Origin Fish Populations and to Uncertainties Research regarding differing life histories of a wild steelhead population, 2) Assessing the Status and Trend of Adult Natural Origin Fish Populations, and 3) Monitoring and Evaluating the Effectiveness of Tributary Habitat Actions Relative to Environmental, Physical, or Biological Performance Objectives. During summer 2014, we PIT-tagged steelhead parr in headwater areas of the Wind River subbasin to investigate life-history diversity, specifically to compare fate of those juvenile steelhead that move downstream prior to smolting with those that remain in their natal areas until smolting. A series of instream PTISs monitored movement of these fish. We added a new multi-antenna PTIS on Trout Creek and made improvements to two of our smaller tributary PTISs during 2014. Detections at the instream PTISs showed trends of parr emigration during summer and fall, in addition to the expected movement of parr and smolts in spring. Long-term monitoring of PIT-tagged fish will provide information on contribution of various life-history strategies to smolt production and adult returns, as well as helping to identify factors influencing parr movement. Movements of PIT-tagged adult steelhead were tracked with our instream PTISs. These data will contribute to a better understanding of timing and distribution of spawning by this population of wild steelhead within the Wind River subbasin. Additionally, these data have provided information on timing of adult movements to various parts of the watershed, which is allowing us to assess adult use of tributary watersheds within the Wind River subbasin. These data are contributing to evaluating steelhead response to the removal of Hemlock Dam from Trout Creek. Hemlock Dam, which was located at rkm 2.0 of Trout Creek, was removed in summer 2009 and had contributed to hydrologic impairment of Trout Creek and potentially caused some deterrent to upstream adult steelhead migration. Evaluating restoration efforts is of interest to many managers and agencies so that funding and time are allocated for best results. The evaluation of various life-histories of Lower Columbia River steelhead within the Wind River subbasin provides information to better track populations, and more effectively direct habitat restoration and water allocation planning. Increasingly detailed Viable Salmonid Population information (Crawford and Rumsey 2009), such as that provided by PIT-tagging and instream PTISs networks like those we build and operate in the Wind River subbasin, provide data to better inform policy and management, as life-history strategies and production bottlenecks are identified and understood.

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