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Modeling approaches in avian conservation and the role of field biologists

This review grew out of our realization that models play an increasingly important role in conservation but are rarely used in the research of most avian biologists. Modelers are creating models that are more complex and mechanistic and that can incorporate more of the knowledge acquired by field biologists. Such models require field biologists to provide more specific information, larger sample sizes, and sometimes new kinds of data, such as habitat-specific demography and dispersal information. Field biologists need to support model development by testing key model assumptions and validating models. The best conservation decisions will occur where cooperative interaction enables field biologists, modelers, statisticians, and managers to contribute effectively. We begin by discussing the general form of ecological models—heuristic or mechanistic, "scientific" or statistical—and then highlight the structure, strengths, weaknesses, and applications of six types of models commonly used in avian conservation: (1) deterministic single-population matrix models, (2) stochastic population viability analysis (PVA) models for single populations, (3) metapopulation models, (4) spatially explicit models, (5) genetic models, and (6) species distribution models. We end by considering their unique attributes, determining whether the assumptions that underlie the structure are valid, and testing the ability of the model to predict the future correctly.

Ornithological Monographs

Effects of resighting errors on capture-resight estimates for neck-banded Canada geese

Biologists who study neck-banded Canada Geese (Branta canadensis) have used capture and resighting histories to estimate annual resighting rates, survival rates and the number of marked birds in the population. Resighting errors were associated with 9.4% ( n = 155) of the birds from a sample of Canada Geese neckbanded in the Mississippi flyway, 1974-1987, and constituted 3.0% ( n = 208) of the resightings. Resighting errors significantly reduced estimated resighting rates and significantly increased estimated numbers of marked geese in the sample. Estimates of survival rates were not significantly affected by resighting errors. Recommendations are offered for using neck-band characters that may reduce resighting errors.

Wisconsin

Nesting by pomarine jaegers near Barrow, Alaska, 1971

An estimated 5.7 pairs of pomarine jaegers km -2 (14.8 mi -2 ) nested near Barrow, Alaska, in 1971. Hatching success of 67 eggs (34 nests) was 57%. Fledging success of 44 nestlings (26 nests) was 32%. An estimated 0.4 young survived to 25 d of age per nesting attempt. Low fledging success is explained by an abrupt decline in lemming abundance.

Journal of Field Ornithology

At-sea distribution of radio-marked Ashy Storm-Petrels Oceanodroma homochroa captured on the California Channel Islands

Small, rare and wide-ranging pelagic birds are difficult to locate and observe at sea; little is therefore known regarding individual movements and habitat affinities among many of the world's storm-petrels (Family Hydrobatidae). We re-located 57 of 70 radio-marked Ashy Storm-Petrels Oceanodroma homochroa captured at three colonies in the California Channel Islands: Scorpion Rocks (2004, 2005), Santa Barbara Island (2004) and Prince Island (2005). Between 23 July and 22 September 2004, and 5 July and 4 August 2005, we flew 29 telemetry surveys, covered more than 65 000 km2 (2004) and 43 000 km2 (2005) of open ocean from San Nicolas Island north to the Farallon Islands and obtained 215 locations from 57 storm-petrels at sea. In both years, radio-marked storm-petrels were aggregated over the continental slope from Point Conception to Point Buchon, within the western Santa Barbara Channel, and over the Santa Cruz Basin between Santa Cruz, San Nicolas and Santa Barbara islands. Individuals captured in the Channel Islands ranged more than 600 km and were located as far north as Gulf of the Farallones National Marine Sanctuary. This is the first study to use radiotelemetry to determine the at-sea distribution and movements for any storm-petrel species.

Marine Ornithology: Journal of Seabird Research an

Distribution of autumn-staging Lesser Snow Geese on the northeast coastal plain of Alaska

We conducted aerial surveys of Lesser Snow Geese ( Chen caerulescens caerulescens ) during autumn staging on the coastal plain of the Arctic National Wildlife Refuge (ANWR) in northeast Alaska from late August through September, 1982 - 1993. We evaluated numbers and distribution of Snow Geese that staged on the ANWR, compared abundance of birds among 5 x 5-km cells used frequently (5 - 8 yr), periodically (3 - 4 yr), or infrequently (1 - 2 yr), and examined distribution changes within years. Maximum numbers of Snow Geese observed annually were highly variable (range 12,828 - 309,225). Snow Goose flocks occurred across 605,000 ha of the coastal plain, but used some areas more frequently than others. Frequently used cells (38 of 363 cells in the study area) were non-randomly distributed and primarily occurred on the central coastal plain between the wet coastal and steep foothills regions. Abundance of geese was greatest in frequently used, intermediate in periodically used, and lowest in infrequently used cells. Within years, Snow Goose numbers and flock locations varied between surveys, possibly because geese moved to different foraging areas during staging. The widespread distribution and annual variability in numbers of Snow Geese on the coastal plain was likely because birds used foraging habitats that were spatially and temporally heterogeneous. The ANWR coastal plain is an important component of the fall-staging area used by Snow Geese that nest in the western Canadian Arctic. Management decisions that affect the region should reflect its value to migrating Snow Geese.

Alaska

Breeding dispersal of Eastern Bluebirds depends on nesting success but not on removal of old nests: An experimental study

One hypothesis to explain both within-and between-season breeding dispersal is that individuals move in response to degradation in the suitability and/or quality of their nesting sites. This hypothesis was experimentally examined by manipulating the suitability and/or quality of nesting boxes used by Eastern Bluebirds (Sialia sialis) on one study site in upstate South Carolina. From 12 randomly assigned boxes, old nests, parasites, dead nestlings, old food or feces were not removed, as they were from 12 other randomly assigned boxes. There were 24 nesting attempts in cleaned boxes; 26 in not-cleaned boxes. Third brood nesting attempts occurred in only one of the cleaned boxes but in five of the not-cleaned boxes. Only 59% of individuals stayed to breed again within the season in not-cleaned boxes, whereas 72% stayed in cleaned boxes. Equal numbers of both males and females returned to breed in cleaned and not-cleaned boxes during the next breeding season, however. Both within-and between-season breeding dispersal is significantly more likely after unsuccessful nesting attempts than successful nesting attempts. There was no significant effect of cleaning or not cleaning nesting boxes on the chance of nesting attempts or the numbers of nestlings fledged from nesting boxes.

Journal of Field Ornithology

Nest materials as a source of genetic data for avian ecological studies

We examined the utility of feathers and egg shell membranes, deposited in the nests of Spectacled Eiders (Somateria fischeri), as a source of DNA for genetic studies at both the population and individual level. The potential for feather DNA contamination as a result of female behavioral interactions (e.g. nest parasitism), reuse of nest sites from previous years, or other unknown occurrences was acknowledged and specifically tested. DNA was successfully extracted from both feathers and egg shell membranes and waterfowl microsatellite loci were used to construct individual genotypes. We found no difference in the genotypes obtained from nest feathers or blood of the incubating female. Detection of nest feather contamination was possible with as little as one feather when samples from multiple females were intentionally mixed. Triplicate DNA extractions from 33 nests provided a means of detecting contamination in 3 nests. Egg membranes proved a viable source of offspring DNA and can contribute valuable data to investigations of parentage when assayed jointly with maternal feather DNA. Nest materials provide an efficient, non-invasive method of genetic sampling that can be readily incorporated into field research. However, the natural history traits and mating strategies of a species must be considered during sample collection to identify the possible sources of nest materials (e.g., paternal, maternal, parasite, etc.). Specific experiments should also be designed to test sampling assumptions.

Journal of Field Ornithology

Mourning Dove nesting habitat and nest success in Central Missouri

Previous Mourning Dove (Zenaida macroura) nesting studies conducted in areas containing a mixture of edge and continuous habitats have focused on edge habitats. Consequently, little is known about the potential contribution of continuous habitats to dove production. In this study we evaluated the relative importance of these two extensive habitat types by monitoring the habitat use and nest success of 59 radio-marked doves during 1990-1991 in central Missouri. Of 83 nests initiated by our marked sample, most (81.9%) were located in edge habitats. Although continuous habitats were selected less as nest sites, the proportion of successful nests did not differ significantly from that in edge habitats. Our data indicate that continuous habitats should not be considered marginal nesting habitat. If the intensity of use and nest success that we observed are representative regionally or nationally, continuous habitats could contribute substantially to annual Mourning Dove production because of the high availability of these habitats throughout much of the Mourning Dove breeding range.

Journal of Field Ornithology

Loss from harlequin ducks of abdominally implanted radio transmitters equipped with percutaneous antennas

We documented extrusion and loss of abdominally implanted radio transmitters with percutaneous antennas from adult female Harlequin Ducks (Histrionicus histrionicus). Birds were captured during wing molt (late August to mid-September) in 1995-1997. Of 44 Harlequin Ducks implanted with radios and recaptured, 7 (16%) had lost their transmitters and 5 (11%) had radios in the process of extruding. Most (11 of 12) extrusions and losses occurred in birds implanted with radios in 1996 and recaptured in 1997. We suggest that transmitter extrusions and losses were due largely to changes in transmitter design made between 1095 and 1996. Transmitters implanted in 1996 were cylindrical rather than spherical, had a flat end with an abrupt edge, and the lower portion of the antenna was reinforced. Radio losses occurred after the 7-mo monitoring period and caused no apparent harm to the birds. Investigators using implanted radios with percutaneous antennas for long-term projects should be aware of the potential for radio extrusion and should minimize the problem by using transmitters that have no sharp edges and that are wide, rather than narrow.

Journal of Field Ornithology

Evaluation of bursal depth as an indicator of age class of harlequin ducks

We contrasted the estimated age class of recaptured Harlequin Ducks (Histrionicus histrionicus) (n = 255) based on bursal depth with expected age class based on bursal depth at first capture and time since first capture. Although neither estimated nor expected ages can be assumed to be correct, rates of discrepancies between the two for within-year recaptures indicate sampling error, while between-year recaptures test assumptions about rates of bursal involution. Within-year, between-year, and overall discrepancy rates were 10%, 24%, and 18%, respectively. Most (86%) between-year discrepancies occurred for birds expected to be after-third-year (ATY) but estimated to be third-year (TY). Of these ATY-TY discrepancies, 22 of 25 (88%) birds had bursal depths of 2 or 3 mm. Further, five of six between-year recaptures that were known to be ATY but estimated to be TY had 2 mm bursas. Reclassifying birds with 2 or 3 mm bursas as ATY resulted in reduction in between-year (24% to 10%) and overall (18% to 11%) discrepancy rates. We conclude that age determination of Harlequin Ducks based on bursal depth, particularly using our modified criteria, is a relatively consistent and reliable technique.

Journal of Field Ornithology

Characteristics of diving in radio-marked Xantus's Murrelets

We monitored diving activity of radio-marked Xantus's Murrelets Synthliboramphus hypoleucus near Anacapa Island, California, during the breeding season. Thirteen radio-marked murrelets were remotely monitored from Anacapa Island with a handheld antenna and radio receiver for 29 hours in three sample periods in April and May 2003. Mean dive durations in the sample periods were 18 s ?? 2 s, 28 s ?? 2 s, and 24 s ?? 4 s, suggesting that dives were less than 21 m from the surface. Dive duration and subsequent time on the surface differed between the sample periods. Dive duration and subsequent time on the surface were not correlated in observations stratified by individual bird or by sample period. Further, dive duration and subsequent time on the surface were not correlated within foraging bouts. Dive characteristics measured near Anacapa Island suggested that Xantus's Murrelets have the ability to capture prey found at varying depths, but will feed on prey that is most available near the surface of the water.

Marine Ornithology: Journal of Seabird Research an

Distribution, population status and trends of Kittlitz's murrelet Brachyramphus brevirostris in Lower Cook Inlet and Kachemak Bay, Alaska

Lower Cook Inlet (LCI) in south-central Alaska is unusual among the breeding areas of Kittlitz's Murrelet Brachyramphus brevirostris because of human impacts on the marine and terrestrial environments and because of the lack of tidewater glaciers. In LCI the Kittlitz's Murrelet co-exists with the more abundant Marbled Murrelet, which complicates abundance estimates because of the difficulty of species identification. We compared survey data for an area with overlapping coverage in LCI (Core area) in 1993 (June) and from 1996 to 1999 (July-early August). Within this LCI Core area, the surveys in 1996-1999 estimated ~1600 Kittlitz's Murrelets and ~17 000 Marbled Murrelets, including prorated unidentified murrelets. The Kittlitz's Murrelet population declined between 1993 and 1999 at 26% per annum (84% overall). Simultaneously, Marbled Murrelets declined by 12% per annum (56% overall), though the decline was not statistically significant. Declines were estimated conservatively because the 1993 survey was conducted in June, when both murrelet species are less abundant on the water. We also surveyed Kachemak Bay, a large embayment of LCI, during mid-summer (July) of 2005-2007 and estimated a population of 2047 Kittlitz's Murrelets (SD 1120, n = 3 years) residing primarily in the inner bay. Marbled Murrelets numbered 11 040 (SD 1306) and were found throughout the bay. On one transect set in inner Kachemak Bay, Kittlitz's Murrelet density in late summer (1-16 August) declined 7.5% per annum between 1988 and 2007 (n = 6 years), and Marbled Murrelet density increased 4.9% per annum. On two other transect sets in the inner bay, however, neither murrelet species showed a change in density between 1996 and 2007. Inner Kachemak Bay is a persistent hotspot for Kittlitz's Murrelet and may attract murrelets from LCI and beyond. We recommend monitoring murrelet populations in Kachemak Bay, although Kittlitz's Murrelets likely move between the main body of Cook Inlet and Kachemak Bay, and a complete LCI survey is needed to gauge regional population trends.

Marine Ornithology: Journal of Seabird Research an

Status and trend of the Kittlitz's Murrelet Brachyramphus brevirostris in Glacier Bay, Alaska

We conducted standardized surveys for marine birds in Glacier Bay in seven years between 1991 and 2008. From our most recent survey, a combination of line- and strip-transect methods completed in 2008, we estimated that 4981 (95% CI 1293–8670) Kittlitz’s Murrelets Brachyramphus brevirostris resided in Glacier Bay during the month of June, together with 12 195 (5607–18 783) Marbled Murrelets B. marmoratus . When counts were prorated to assign unidentified Brachyramphus murrelets to species, population estimates increased to 5641 Kittlitz’s Murrelets and 13 810 Marbled Murrelets. Our surveys of bird numbers in Glacier Bay between 1991 and 2008 revealed that Kittlitz’s Murrelet declined by ≥85% during this period. Trend analysis suggested a rate of decline between -10.7% and -14.4% per year. No direct human impacts (e.g., bycatch, oil pollution, vessel disturbance) in our study area could fully account for a decline of this magnitude. Widespread declines of Brachyramphus murrelets and Harbor Seals Phoca vitulina in the Gulf of Alaska during the 1980s-1990s suggest large-scale influences on these marine predators, perhaps related to climate-mediated cycles in food supply. Other natural factors that may impact Glacier Bay populations include predation by avian and terrestrial predators, widespread glacial retreat and its effect on nesting and foraging habitats, and competition for food with marine predators whose abundance in Glacier Bay has increased markedly in recent years (Humpback Whales Megaptera novaeangliae and Steller Sea Lions Eumetopias jubatus ).

Alaska

Status and distribution of the Kittlitz's murrelet Brachyramphus brevirostris in Kenai Fjords, Alaska

The Kittlitz's Murrelet Brachyramphus brevirostris is a candidate species for listing under the US Endangered Species Act because of its apparent declines within core population areas of coastal Alaska. During the summers of 2006-2008, we conducted surveys in marine waters adjacent to Kenai Fjords National Park, Alaska, to estimate the current population size of Kittlitz's and Marbled murrelets B. marmoratus and examine seasonal variability in distribution within coastal fjords. We also evaluated historical data to estimate trend. Based on an average of point estimates, we find the recent population (95% CI) of Kittlitz's Murrelet to be 716 (353-1080) individuals, that of Marbled Murrelet to be 6690 (5427-7953) individuals, and all Brachyramphus murrelets combined to number 8186 (6978-9393) birds. Within-season density estimates showed Kittlitz's Murrelets generally increased between June and July, but dispersed rapidly by August, while Marbled Murrelets generally increased throughout the summer. Trends in Kittlitz's and Marbled murrelet populations were difficult to assess with confidence. Methods for counting or sampling murrelets varied in early decades of study, while in later years there is uncertainty due to highly variable counts among years, which may be due in part to timing of surveys relative to the spring bloom in coastal waters of the Gulf of Alaska.

Marine Ornithology: Journal of Seabird Research an

Energy cost of vessel disturbance to Kittlitz's Murrelets Brachyramphus brevirostris

We evaluated the energy cost of vessel disturbance for individual Kittlitz’s Murrelets Brachyramphus brevirostris in Glacier Bay National Park and Preserve in Alaska, USA. We used Monte Carlo simulations to model the daily energy expense associated with flight from vessels by both breeding and non-breeding birds and evaluated risk based on both the magnitude of costs incurred and the degree to which the costs may be chronic. We used two scenarios of vessel disturbance for average- and peak-vessel traffic. Because they are more likely to fly away from vessels, non-breeding birds had a greater increase in energy expenditure when disturbed (up to 30% increase under the average scenario and >50% increase under the peak scenario) than breeders (up to 10% and 30% increases under the average and peak scenarios, respectively). Likewise, non-breeding birds were more likely to experience chronic increases in energy expense (i.e. a greater percentage of days with an increase in energy expenditure) than breeding birds. Our modeling results indicated that breeding and non-breeding birds were both susceptible to fitness consequences (e.g. reduced reproductive success and survival) resulting from the energy cost.

Alaska

Evaluation of capture techniques for long-billed curlews wintering in Texas

Texas coast harbors the largest, eastern-most populations of Long-billed Curlews (Numenius americanus) in North America; however, very little is known about their migration and wintering ecology. Curlews are readily captured on their breeding grounds, but experience with capturing the species during the non-breeding season is extremely limited. We assessed the efficacy of 6 capture techniques for Long-billed Curlews in winter: 1) modified noose ropes, 2) remotely controlled bow net, 3) Coda Netgun, 4) Super Talon net gun, 5) Hawkseye whoosh net, and 6) cast net. The Coda Netgun had the highest rate of captures per unit of effort (CPUE = 0.31; 4 curlew captures/13 d of trapping effort), followed by bow net (CPUE = 0.17; 1 capture/6 d of effort), whoosh net (CPUE = 0.14; 1 capturel7 d of effort), and noose ropes (CPUE = 0.07; 1 capturel15 d of effort). No curlews were captured using the Super Talon net gun or a cast net (3 d and 1 d of effort, respectively). Multiple capture techniques should be readily available for maximum flexibility in matching capture methods with neophobic curlews that often unpredictably change referred feeding locations among extremely different habitat types.

Texas

Effect of delayed reporting of band recoveries on survival estimates

Brownie et al. (U.S. Fish and Wildl. Serv., Resource Publ. 131, 1978) presented 14 models based on an array of explicit assumptions for the study of survival in avian populations. These methods are replacing the life table methods previously used to estimate survival rates (e.g., Burnham and Anderson, J. Wildl. Manage. , 43: 356-366, 1979). The new methods allow survival or recovery rates, or both, to be constant, time-specific, or time- and age-specific. In studies to estimate survival rates for birds the data are often from recoveries of birds shot or found dead during the hunting season and reported to the Bird Banding Laboratory by sportsmen, conservation agency employees, or the general public. This note examines the bias in estimating annual survival due to a proportion of the recoveries being incorrectly reported a year late. Specifically, a few recoveries each year of, for example, adult male American Widgeon ( Anas americana ) banded in California are reported as being recovered in year i + 1 when in fact they were actually recovered the previous year i. Delayed reporting might typically be caused by people finding a band in their health clothing in the fall of the year and, being embarrassed about their failure to report the band when it was taken, report it a year late not mentioning the actual year of recovery. Heuristically, delayed reporting should bias estimated annual survival rates upwards because it appears from the data that the birds corresponding to the "delayed" recoveries actually lived an additional year.

Journal of Field Ornithology