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Pollution of Illinois and Mississippi Rivers by Chicago sewage, a digest of the testimony taken in the case of the State of Missouri v. the State of Illinois and the Sanitary District of Chicago

The testimony taken in the suit of the State of Missouri against the State of Illinois and the sanitary district of Chicago comprises the best symposium on river pollution, its biological and chemical aspects, and its general and special sanitary significance that has ever been assembled. The contentions of both parties to the suit' are supported by the most eminently qualified men in the United States. The evidence presented and the discussions recorded are therefore of unique importance. The final record of testimony occupies 8,000 printed pages, much of which is irrelevant. This digest of testimony is the result of an attempt to recover the valuable material and present it in concise form. A consistent endeavor has been made by the reviewer to eliminate all personal opinions with reference to the issue and to make an impartial presentation of so much of the testimony as in his opinion appears to be relevant and of scientific importance. It will be well to remember in this connection that any digest of so large a volume of testimony must be the result of a final exercise of personal opinion by the reviewer as to those parts which may best be excluded. Naturally opinions will differ on this point; therefore it will be strange if many of those familiar with the case do not find that certain portions of testimony which they consider most important are passed over in this digest without reference. Controversies between counsel, objections to the admission of testimony, legal technicalities and quibbles, badgering cross-examination, and in general all the testimony introduced for purposes of mere corroboration have been disregarded. The object has been to present a faithful statement of the scientific phases of the testimony to the exclusion, if need be, of the legal aspect of the case.

Illinois, Missouri

Techniques to improve ecological interpretability of black box machine learning models

Statistical modeling of ecological data is often faced with a large number of variables as well as possible nonlinear relationships and higher-order interaction effects. Gradient boosted trees (GBT) have been successful in addressing these issues and have shown a good predictive performance in modeling nonlinear relationships, in particular in classification settings with a categorical response variable. They also tend to be robust against outliers. However, their black-box nature makes it difficult to interpret these models. We introduce several recently developed statistical tools to the environmental research community in order to advance interpretation of these black-box models. To analyze the properties of the tools, we applied gradient boosted trees to investigate biological health of streams within the contiguous USA, as measured by a benthic macroinvertebrate biotic index. Based on these data and a simulation study, we demonstrate the advantages and limitations of partial dependence plots (PDP), individual conditional expectation (ICE) curves and accumulated local effects (ALE) in their ability to identify covariate–response relationships. Additionally, interaction effects were quantified according to interaction strength (IAS) and Friedman’s H 2 "> H 2 statistic. Interpretable machine learning techniques are useful tools to open the black-box of gradient boosted trees in the environmental sciences. This finding is supported by our case study on the effect of impervious surface on the benthic condition, which agrees with previous results in the literature. Overall, the most important variables were ecoregion, bed stability, watershed area, riparian vegetation and catchment slope. These variables were also present in most identified interaction effects. In conclusion, graphical tools (PDP, ICE, ALE) enable visualization and easier interpretation of GBT but should be supported by analytical statistical measures. Future methodological research is needed to investigate the properties of interaction tests. Supplementary materials accompanying this paper appear on-line.

Journal of Agricultural, Biological, and Environme

Evaluation and application of regional turbidity-sediment regression models in Virginia

Conventional thinking has long held that turbidity-sediment surrogate-regression equations are site specific and that regression equations developed at a single monitoring station should not be applied to another station; however, few studies have evaluated this issue in a rigorous manner. If robust regional turbidity-sediment models can be developed successfully, their applications could greatly expand the usage of these methods. Suspended sediment load estimation could occur as soon as flow and turbidity monitoring commence at a site, suspended sediment sampling frequencies for various projects potentially could be reduced, and special-project applications (sediment monitoring following dam removal, for example) could be significantly enhanced. The objective of this effort was to investigate the turbidity-suspended sediment concentration (SSC) relations at all available USGS monitoring sites within Virginia to determine whether meaningful turbidity-sediment regression models can be developed by combining the data from multiple monitoring stations into a single model, known as a “regional” model. Following the development of the regional model, additional objectives included a comparison of predicted SSCs between the regional model and commonly used site-specific models, as well as an evaluation of why specific monitoring stations did not fit the regional model.

Virginia

The effects of management practices on grassland birds — An introduction to North American grasslands and the practices used to manage grasslands and grassland birds

The Great Plains of North America is defined as the land mass that encompasses the entire central portion of the North American continent that, at the time of European settlement, was an unbroken expanse of primarily herbaceous vegetation. The Great Plains extend from central Saskatchewan and Alberta to central Mexico and from Indiana to the Rocky Mountains. The expanses of herbaceous vegetation are often referred to as native prairie or native grasslands. Native grasslands share the characteristics of a general uniformity in vegetation structure, dominance by grasses and forbs, a near absence of trees and shrubs, annual precipitation ranging from 25 to 100 centimeters, extreme intra-annual fluctuations in temperature and precipitation, and a flat to rolling topography over which fires can spread. To the west of the Great Plains lie the sagebrush communities of the Great Basin, which extend from British Columbia and Saskatchewan to northern Arizona and New Mexico and from the eastern slopes of the Sierra Nevada and Cascade mountain ranges to western South Dakota. Sagebrush communities share similar characteristics to native grasslands, but their location east of the Rocky Mountains creates a more moderating influence from prevailing westerly winds that affect timing of peak precipitation and growth form of dominant vegetation. Native grasslands and sagebrush communities harbor a diverse array of grassland, wetland, and woodland plant and animal communities that are uniquely adapted to the natural forces of the Great Plains and Great Basin, namely the interactive forces of climate, fire, and grazing. The arrival of European settlers to North America brought profound change to native grassland and sagebrush communities, including the establishment of permanent towns and cities, the proliferation of cropland-based agricultural systems, and the suppression of wildfires. The near extirpation of bison by the 1860s paved the way for dramatic changes in the dominant grazers and a shift in the disturbance patterns that historically influenced vegetation structure. The greatest threat to native grasslands and sagebrush communities in modern times is their loss due to conversion to rowcrop agriculture and to urbanization. Concomitant with habitat loss is a precipitous decline in populations of bird species that evolved with, and are uniquely adapted to, the native grassland and sagebrush habitats. Avian population trends are linked strongly to agricultural land use. Besides outright loss of suitable breeding habitat, agricultural practices affect birds through factors such as pesticide exposure, habitat fragmentation, shifts in predator community composition, and occurrence of brood parasites. Bird populations face other stressors, such as loss of habitat to and behavioral avoidance of urbanized areas, roads, and infrastructure associated with energy production. Despite the many anthropogenic changes to North American grassland and sagebrush communities, some bird species are adaptable and opportunistic in their habitat selection and now utilize one or more human-created habitats. Human-created habitats include pastures, hayfields, agricultural terraces, crop buffer strips, field borders, grassed waterways, fencerows, road rights-of-way, airports, reclaimed coal mines, and planted wildlife cover. Fields of seeded grasslands enrolled in Federal long-term set-aside programs, such as the Conservation Reserve Program in the United States and the Permanent Cover Program in Canada, provide important nesting habitat for grassland bird species. The array of habitats used by birds makes habitat and avian management a complex undertaking, and the scale (for example, local, regional, international) at which management actions can be implemented are such that a universal approach to managing grasslands for the conservation of the entire suite of bird species does not exist. Experienced land managers recognize that it is impossible to manage for all bird species simultaneously, and thus, prioritization is necessary towards those habitats or bird species that the manager or management agency ranks highest for a specific region or management unit. The primary tools available for management are burning, grazing, mowing, herbicide application, and idling, but before choosing a particular practice, a manager will want to consider issues of seasonality, intensity, and frequency. Despite the thousands of studies that are cited in this compendium, much remains unknown about the effects of management practices on bird species. The series of species accounts in this compendium review the current state of knowledge regarding management of grassland and sagebrush bird species and summarize information on the effects of management practices on individual species. The accounts do not give definitive statements on the effects of management practices for any particular species, primarily because there are very few replicated studies in which identical management practices have been applied in the same geographical area with consistent results, which are elements necessary to provide concrete recommendations for the management of a particular species in a particular area. Documentation of the effects of management treatments on individual species through statistically sound methods that incorporate multiple years and locations will further scientists’ and land managers’ knowledge far more than 1–2-year studies that are limited in scope as well as time, but studies of that scope and breadth are rare.

Professional Paper

Perspectives on bay-delta science and policy

The State of Bay–Delta Science 2008 highlighted seven emerging perspectives on science and management of the Delta. These perspectives had important effects on policy and legislation concerning management of the Delta ecosystem and water exports. From the collection of papers that make up the State of Bay–Delta Science 2016, we derive another seven perspectives that augment those published in 2008. The new perspectives address nutrient and contaminant concentrations in Delta waters, the failure of the Delta food web to support native species, the role of multiple stressors in driving species toward extinction, and the emerging importance of extreme events in driving change in the ecosystem and the water supply. The scientific advances that underpin these new perspectives were made possible by new measurement and analytic tools. We briefly discuss some of these, including miniaturized acoustic fish tags, sensors for monitoring of water quality, analytic techniques for disaggregating complex contaminant mixtures, remote sensing to assess levee vulnerability, and multidimensional hydrodynamic modeling. Despite these new tools and scientific insights, species conservation objectives for the Delta are not being met. We believe that this lack of progress stems in part from the fact that science and policy do not incorporate sufficiently long-term perspectives. Looking forward half a century was central to the Delta Visioning process, but science and policy have not embraced this conceptual breadth. We are also concerned that protection and enhancement of the unique cultural, recreational, natural resource, and agricultural values of the Delta as an evolving place, as required by the Delta Reform Act, has received no critical study and analysis. Adopting wider and longer science and policy perspectives immediately encourages recognition of the need for evaluation, analysis, and public discourse on novel conservation approaches. These longer and wider perspectives also encourage more attention to the opportunities provided by heavily invaded ecosystems. It is past time to turn scientific and policy attention to these issues.

California

Recreation, values and stewardship: Rethinking why people engage in environmental behaviors in parks and protected areas

Successfully promoting and encouraging the adoption of environmental stewardship behavior is an important responsibility for public land management agencies. Although people increasingly report high levels of concern about environmental issues, widespread patterns of stewardship behavior have not followed suit (Moore 2002). One concept that can be applied in social science research to explain behavior change is that of values. More specifically, held and assigned values lie at the heart of understanding why people around the world continue to live in unsustainable ways that impact parks and protected areas. A held value is an individual psychological orientation defined by Rokeach as “an enduring belief that a specific mode of conduct or endstate of existence is personally and socially preferable” (1973, 550). Held values are at the core of human cognition, and as such, influence attitudes and behavior. Assigned values on the other hand, according to Brown (1984), are the perceived qualities of an environment that are based on and deduced from held values. In other words, assigned values are considered the material and nonmaterial benefits that people believe they obtain from ecosystems. Held and assigned values predict stewardship behaviors (Figure 1). During the 2013 George Wright Society Conference on Parks, Protected Areas, and Cultural Sites, we organized a session to improve our understanding of why individuals and groups choose to engage in stewardship behaviors that benefit the environment. We used held and assigned values as vehicles to explore what people cared about in diverse landscapes, review select case studies from across the globe, and question how best to incorporate visitor perspectives into protected area management decisions and policymaking. In addition to sharing project results, we also discussed the importance of accounting for multiple and often competing value perspectives, potential ways to integrate disciplinary perspectives on valuing nature, and future directions for social science research and practice. In this paper, we present the results from our session to provide fodder for further contemplation about the timely question of how park and protected area managers can foster values that lead to environmental protection.

Book chapter

Automating calibration, sensitivity and uncertainty analysis of complex models using the R package Flexible Modeling Environment (FME): SWAT as an example

Parameter optimization and uncertainty issues are a great challenge for the application of large environmental models like the Soil and Water Assessment Tool (SWAT), which is a physically-based hydrological model for simulating water and nutrient cycles at the watershed scale. In this study, we present a comprehensive modeling environment for SWAT, including automated calibration, and sensitivity and uncertainty analysis capabilities through integration with the R package Flexible Modeling Environment (FME). To address challenges (e.g., calling the model in R and transferring variables between Fortran and R) in developing such a two-language coupling framework, 1) we converted the Fortran-based SWAT model to an R function (R-SWAT) using the RFortran platform, and alternatively 2) we compiled SWAT as a Dynamic Link Library (DLL). We then wrapped SWAT (via R-SWAT) with FME to perform complex applications including parameter identifiability, inverse modeling, and sensitivity and uncertainty analysis in the R environment. The final R-SWAT-FME framework has the following key functionalities: automatic initialization of R, running Fortran-based SWAT and R commands in parallel, transferring parameters and model output between SWAT and R, and inverse modeling with visualization. To examine this framework and demonstrate how it works, a case study simulating streamflow in the Cedar River Basin in Iowa in the United Sates was used, and we compared it with the built-in auto-calibration tool of SWAT in parameter optimization. Results indicate that both methods performed well and similarly in searching a set of optimal parameters. Nonetheless, the R-SWAT-FME is more attractive due to its instant visualization, and potential to take advantage of other R packages (e.g., inverse modeling and statistical graphics). The methods presented in the paper are readily adaptable to other model applications that require capability for automated calibration, and sensitivity and uncertainty analysis.

Environmental Modelling and Software

Detection and measurement of land subsidence and uplift using interferometric synthetic aperture radar, San Diego, California, USA, 2016–2018

Land subsidence associated with groundwater-level declines is stipulated as an “undesirable effect” in California’s Sustainable Groundwater Management Act (SGMA), and has been identified as a potential issue in San Diego, California, USA. The United States Geological Survey (USGS), the Sweetwater Authority, and the City of San Diego, undertook a cooperative study to better understand the hydromechanical response of the coastal aquifer system using Interferometric Synthetic Aperture Radar (InSAR) techniques. Three periods of interest were analyzed for this study that correspond to the periods before and after two substantial changes were made to the location and volume of pumpage: (1) April–August 2016 when groundwater levels and land surface elevation were relatively stable during normal pumping, (2) September 2016–May 2017 when groundwater levels recovered and the land surface uplifted during a period of substantially reduced pumping, (3) June 2017–October 2018 when groundwater levels declined and land subsidence occurred when pumpage resumed and expanded to new wells. Spatial and temporal characterization of the hydromechanical response to changes in pumpage is important for managing land subsidence. Further study using InSAR techniques, especially when combined with ground-based geodetic and monitoring-well networks, will provide water managers information to help effectively manage groundwater resources as stipulated in the SGMA.

California

Experimental and field observations of breach dynamics accompanying erosion of Marmot Cofferdam, Sandy River, Oregon

A key issue faced in dam removal is the rate and timing of remobilization and discharge of stored reservoir sediments following the removal. Different removal strategies can result in different trajectories of upstream sediment transport and knickpoint migration. We examine this issue of for the Marmot Dam removal in Sandy River, Oregon, USA using both physical experiments and field studies accompanying removal of the dam in October 2007. The physical experiment was designed to provide insights on how and if the position of a cofferdam notch will affect how reservoir sediments are remobilized, with the goal of minimizing the volume of sediment stranded in terraces. Data and observations indicate that at lower failure discharges, notch position impacts the location of cofferdam failure as well as the location of the first major knickpoint and its trajectory. In particular, notch positions that force the river to migrate laterally in order to adjust to natural valley orientation and morphology were most effective in removing larger volumes of sediment and reducing terrace heights. Actual cofferdam notching to maximize erosion produced extremely rapid and significant erosion of reservoir sediments. Comparison of model results with field observations suggests that the physical experiments provided solid predictions of rates of erosion and overall knickpoint trajectory.

Conference Paper

Groundwater availability of the Central Valley Aquifer, California

California's Central Valley covers about 20,000 square miles and is one of the most productive agricultural regions in the world. More than 250 different crops are grown in the Central Valley with an estimated value of $17 billion per year. This irrigated agriculture relies heavily on surface-water diversions and groundwater pumpage. Approximately one-sixth of the Nation's irrigated land is in the Central Valley, and about one-fifth of the Nation's groundwater demand is supplied from its aquifers. The Central Valley also is rapidly becoming an important area for California's expanding urban population. Since 1980, the population of the Central Valley has nearly doubled from 2 million to 3.8 million people. The Census Bureau projects that the Central Valley's population will increase to 6 million people by 2020. This surge in population has increased the competition for water resources within the Central Valley and statewide, which likely will be exacerbated by anticipated reductions in deliveries of Colorado River water to southern California. In response to this competition for water, a number of water-related issues have gained prominence: conservation of agricultural land, conjunctive use, artificial recharge, hydrologic implications of land-use change, and effects of climate variability. To provide information to stakeholders addressing these issues, the USGS Groundwater Resources Program made a detailed assessment of groundwater availability of the Central Valley aquifer system, that includes: (1) the present status of groundwater resources; (2) how these resources have changed over time; and (3) tools to assess system responses to stresses from future human uses and climate variability and change. This effort builds on previous investigations, such as the USGS Central Valley Regional Aquifer System and Analysis (CV-RASA) project and several other groundwater studies in the Valley completed by Federal, State and local agencies at differing scales. The principal product of this new assessment is a tool referred to as the Central Valley Hydrologic Model (CVHM) that accounts for integrated, variable water supply and demand, and simulates surface-water and groundwater-flow across the entire Central Valley system. The development of the CVHM comprised four major elements: (1) a comprehensive Geographic Information System (GIS) to compile, analyze and visualize data; (2) a texture model to characterize the aquifer system;(3) estimates of water-budget components by numerically modeling the hydrologic system with the Farm Process (FMP); and (4) simulations to assess and quantify hydrologic conditions.

Professional Paper

Conservation genetics of Lake Superior brook trout: Issues, questions, and directions

Parallel efforts by several genetic research groups have tackled common themes relating to management concerns about and recent rehabilitation opportunities for coaster brook trout Salvelinus fontinalis in Lake Superior. The questions that have been addressed include the evolutionary and genetic status of coaster brook trout, the degree of relatedness among coaster populations and their relationship to riverine tributary brook trout populations, and the role and effectiveness of stocking in maintaining and restoring coasters to Lake Superior. Congruent genetic results indicate that coasters are an ecotype (life history variant) rather than an evolutionarily significant unit or genetically distinct strain. Regional structure exists among brook trout stocks, coasters being produced from local populations. Introgression of hatchery genes into wild populations appears to vary regionally and may relate to local population size, habitat integrity, and anthropogenic pressures. Tracking the genetic diversity and integrity associated with captive breeding programs is helping to ensure that the fish used for stocking are representative of their source populations and appropriate for rehabilitation efforts. Comparative analysis of shared samples among collaborating laboratories is enabling standardization of genotype scoring and interpretation as well as the development of a common toolkit for assessing genetic structure and diversity. Incorporation of genetic data into rehabilitation projects will facilitate monitoring efforts and subsequent adaptive management. Together, these multifaceted efforts provide comprehensive insights into the biology of coaster brook trout and enhance restoration options. ?? Copyright by the American Fisheries Society 2008.

Conference Paper

Modelling carbon responses of tundra ecosystems to historical and projected climate: A comparison of a plot- and a global-scale ecosystem model to identify process-based uncertainties

We are developing a process-based modelling approach to investigate how carbon (C) storage of tundra across the entire Arctic will respond to projected climate change. To implement the approach, the processes that are least understood, and thus have the most uncertainty, need to be identified and studied. In this paper, we identified a key uncertainty by comparing the responses of C storage in tussock tundra at one site between the simulations of two models - one a global-scale ecosystem model (Terrestrial Ecosystem Model, TEM) and one a plot-scale ecosystem model (General Ecosystem Model, GEM). The simulations spanned the historical period (1921-94) and the projected period (1995-2100). In the historical period, the model simulations of net primary production (NPP) differed in their sensitivity to variability in climate. However, the long-term changes in C storage were similar in both simulations, because the dynamics of heterotrophic respiration (RH) were similar in both models. In contrast, the responses of C storage in the two model simulations diverged during the projected period. In the GEM simulation for this period, increases in RH tracked increases in NPP, whereas in the TEM simulation increases in RH lagged increases in NPP. We were able to make the long-term C dynamics of the two simulations agree by parameterizing TEM to the fast soil C pools of GEM. We concluded that the differences between the long-term C dynamics of the two simulations lay in modelling the role of the recalcitrant soil C. These differences, which reflect an incomplete understanding of soil processes, lead to quite different projections of the response of pan-Arctic C storage to global change. For example, the reference parameterization of TEM resulted in an estimate of cumulative C storage of 2032 g C m-2 for moist tundra north of 50??N, which was substantially higher than the 463 g C m-2 estimated for a parameterization of fast soil C dynamics. This uncertainty in the depiction of the role of recalcitrant soil C in long-term ecosystem C dynamics resulted from our incomplete understanding of controls over C and N transformations in Arctic soils. Mechanistic studies of these issues are needed to improve our ability to model the response of Arctic ecosystems to global change.

Global Change Biology

Potential effects of gas hydrate on human welfare

For almost 30 years, serious interest has been directed toward natural gas hydrate, a crystalline solid composed of water and methane, as a potential (i) energy resource, (ii) factor in global climate change, and (iii) sub-marine geohazard. Although each of these issues can affect human welfare, only (iii) is considered to be of immediate importance. Assessments of gas hydrate as an energy resource have often been overly optimistic, based in part on its very high methane content and on its worldwide occurrence in continental margins. Although these attributes are attractive, geologic settings, reservoir properties, and phase-equilibria considerations diminish the energy resource potential of natural gas hydrate. The possible role of gas hydrate in global climate change has been often overstated. Although methane is a 'greenhouse' gas in the atmosphere, much methane from dissociated gas hydrate may never reach the atmosphere, but rather may be converted to carbon dioxide and sequestered by the hydrosphere/biosphere before reaching the atmosphere. Thus, methane from gas hydrate may have little opportunity to affect global climate change. However, submarine geohazards (such as sediment instabilities and slope failures on local and regional scales, leading to debris flows, slumps, slides, and possible tsunamis) caused by gas-hydrate dissociation are of immediate and increasing importance as humankind moves to exploit seabed resources in ever-deepening waters of coastal oceans. The vulnerability of gas hydrate to temperature and sea level changes enhances the instability of deep-water oceanic sediments, and thus human activities and installations in this setting can be affected.

Conference Paper

North American migratory bird management issues

As human population and industry have grown in North America, land-use practices have greatly altered the landscape. As a result of this changed landscape, several migratory bird populations have declined in recent years. For waterbirds, there have been several milestones: the 1986 North American Waterfowl Management Plan (NAWMP) and the 1989 North American Wetlands Conservation Act. As a result, the United States and Canada have established 12 habitat and 2 species joint ventures. The primary emphasis of waterfowl management in Canada-U.S. has been land purchase and lease, wetland restoration, and coordination of harvest rates. Because of its different biological and cultural context, Mexico has established other conservation priorities. Mexico has had a long-standing concern to conserve its biodiversity and, in addition, conservation of Mexican resources goes hand in hand with human community development. Unlike Canada-U.S., wetland conservation projects in'Mexico include information gathering, environmental education, and management planning for its 32 priority wetlands. For migratory landbirds' scientists attribute declines in several migrant populations to forest fragmentation on the breeding grounds, deforestation on the wintering grounds, pesticide poisoning, or the cumulative effects of habitat changes. In 1990, the Neotropical Migratory Bird Conservation Program, commonly known as Partners in Flight-Aves de las Americas-was initiated. The next step that is being proposed is the formation of a habitat conservation plan for landbirds modeled after the NAWMP. Management of migratory birds requires a strong international approach in order to coordinate actions for the benefit of migratory birds, their habitats, and the uses they provide.

Wildlife Society Annual Conference

Importance of the Mississippi River Basin for investigating agricultural–chemical contamination of the hydrologic cycle

This special issue is devoted to recent and ongoing research relating to the fate and transport of agricultural chemicals in the Mississippi River Basin by the US Geological Survey Toxic Substances Hydrology (Toxics) Program. The Mississippi River Basin drains approximately 3 200 000 km 2 representing 41% of the United States. This is the largest river in the United States and the third largest in the world. The Mississippi River discharges an average of 19 920 m 3 /s of water into the Gulf of Mexico. The river is an extensively used resource, supplying drinking water to 70 cities in the United States. The Mississippi River Basin has undergone dramatic land use and cultural changes over the last 150 years. Approximately 70 million people now live within the basin, representing approximately 27% of the nation's population. This basin has also become one of the most productive agricultural regions in the world in terms of both crops and livestock grown. Approximately 65% of the nation's harvested cropland is grown in this basin, with more than 100 000 metric tons (t) of pesticides and approximately 6 500 000 t of commercial nitrogen fertilizers applied to cropland within the basin annually. The drainage of more than 20 000 000 ha within the basin has been enhanced by means of tile lines and ditches to lower the water table to make the cropland more productive. While removing the water from the soil as intended, this practice also leads to more rapid transport of contaminants to the river, and ultimately the Gulf of Mexico. Furthermore, the extensive chemical use in the Mississippi River Basin has led to the transport of pesticides and nitrate into the region’s streams, aquifers, and atmosphere. An estimated 1 000 000 t of nitrate-N is transported from the Mississippi River Basin into the Gulf of Mexico annually. The peak annual load of herbicides to the Gulf of Mexico has been documented at 1920 t. The fundamental goal of the papers presented in this volume is to provide a scientific basis for decisions necessary to promote sound and efficient agricultural practices and protect the quality of the nation's water resources.

Science of the Total Environment

'Forensic' geochemical approaches to constrain the source of Au-Ag in low-sulfidation epithermal ores

In order to better constrain genetic processes involved in forming mineral deposits (and ultimately exploration models), it helps to know from where the metals of interest are derived. How the metals arrived at their point of deposition, and why they were deposited there, are separate issues. We are using three different techniques in an attempt to better understand these processes for epithermal ores. All have some ambiguity inherent to them, but we think that based on our preliminary investigations, together they point to a new understanding of how some epithermal ores in the northern Great Basin form. These techniques include: 1) plotting the relative abundances of Au, Ag, Pb, As, Sb, Se, Te of the ores; 2) Pb-isotope abundances in Au-Ag minerals; and 3) Re-Os isotope analyses of Au-Ag minerals in the ores. Results to date suggest: 1) the “epithermal suite” geochemical association is likely related to the similar volatility of these metal(loid)s, and thus we conclude they are derived from the mantle as opposed to representing a shallow origin; and 2) Preliminary Pb and Re-Os isotopic analyses of Au-Ag minerals indicate that they are derived from the mafic that were part of the bimodal volcanic suite associated with the initial emergence of the Yellowstone Hotspot (YHS) in the northern Great Basin at about 16-15 Ma. Epithermal ore formation associated with the YHS which may suggest the source region of the mantle was rapidly depleted.

California, Colorado, Idaho, Nevada, Oregon, Utah,

Prominent emerging diseases within the United States

This manuscript reviews disease syndromes that have become significant aquatic animal health issues within the United States since 2003. The emergence of Viral Hemorrhagic Septicemia (VHS) disease among wild fish in the Great Lakes is probably the most problematic and political issue. The emergence of this pathogen resulted in the issuance of a 2006 VHSV Federal order that placed restrictions on the movement of certain species of fish in the eight states that border the Great Lakes (New York, Pennsylvania, Ohio, Indiana, Illinois, Michigan, and Wisconsin and Minnesota) as well as the movement of live fish into the United States from the Ontario and Quebec Provinces, Canada. Spring Viremia of Carp (SVC) was identified for the first times in the United States during 2002. It was diagnosed as the source of mortality among koi at a private facility in North Carolina as well as from feral carp in Cedar Lake (WI). In 2004, Koi Herpesvirus (KHV) killed 8,000 adult common carp (Cyprinus carpio) in the Chadakoin River (NY); it reoccurred the next year within Chautauqua Lake (NY), killing an estimated 25,000 carp (20–30 lbs. apiece). During the summers of 2007 and 2008, KHV epizootics also occurred among carp in Ontario (Canada). Finally, outbreaks of epizootic shell disease in American lobster (Homarus americanus) have generated concern along the southern New England coast and eastern Long Island Sound. The prevalence and severity of shell disease have increased within inshore areas of southern New England and resulted in significant decreases in lobster catches and marketability.

Conference Paper

A weighted least-squares approach to temporal NDVI smoothing

Satellite imagery provides a unique vantage point for observing seasonal dynamics of the landscape that have implications for global change issues. An objective evaluation of surface conditions may be performed using the normalized difference vegetation index (NDVI) derived from National Oceanic and Atmospheric Administration advanced very high resolution radiometer data. NDVI data are typically very noisy, affected by a number of phenomena including cloud contamination, atmospheric perturbations, and variable illumination and viewing geometry, each of which usually reduces the NDVI. This work describes a weighted least-squares linear regression approach to temporal NDVI smoothing to more efficiently reduce contamination in the NDVI signal. This approach uses a moving window operating on temporal NDVI to calculate a regression line. The window is moved one period at a time, resulting in a family of regression lines associated with each point; this family of lines is then averaged at each point and interpolated between points to provide a continuous temporal NDVI signal. Also, since the factors that cause contamination usually serve to reduce NDVI values, the system applies a weighting factor that favors peak points over sloping or valley points. A final operation assures that all peak NDVI values are retained. The resulting relationship between the smoothed curve and the original data is statistically based. The smoothed data may be used to improve applications involving time-series NDVI data, such as land cover classification, seasonal vegetation characterization, and vegetation monitoring

Conference Paper