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At least 541 records · Page 30Linked to original sources

Biogeographic comparison of Lophelia -associated bacterial communities in the Western Atlantic reveals conserved core microbiome

Over the last decade, publications on deep-sea corals have tripled. Most attention has been paid to Lophelia pertusa , a globally distributed scleractinian coral that creates critical three-dimensional habitat in the deep ocean. The bacterial community associated with L. pertusa has been previously described by a number of studies at sites in the Mediterranean Sea, Norwegian fjords, off Great Britain, and in the Gulf of Mexico (GOM). However, use of different methodologies prevents direct comparisons in most cases. Our objectives were to address intra-regional variation and to identify any conserved bacterial core community. We collected samples from three distinct colonies of L. pertusa at each of four locations within the western Atlantic: three sites within the GOM and one off the east coast of the United States. Amplicon libraries of 16S rRNA genes were generated using primers targeting the V4–V5 hypervariable region and 454 pyrosequencing. The dominant phylum was Proteobacteria (75–96%). At the family level, 80–95% of each sample was comprised of five groups: Pirellulaceae, Pseudonocardiaceae, Rhodobacteraceae, Sphingomonadaceae, and unclassified Oceanospirillales. Principal coordinate analysis based on weighted UniFrac distances showed a clear distinction between the GOM and Atlantic samples. Interestingly, the replicate samples from each location did not always cluster together, indicating there is not a strong site-specific influence. The core bacterial community, conserved in 100% of the samples, was dominated by the operational taxonomic units of genera Novosphingobium and Pseudonocardia , both known degraders of aromatic hydrocarbons. The sequence of another core member, Propionibacterium , was also found in prior studies of L. pertusa from Norway and Great Britain, suggesting a role as a conserved symbiont. By examining more than 40,000 sequences per sample, we found that GOM samples were dominated by the identified conserved core sequences, whereas open Atlantic samples had a much higher proportion of locally consistent bacteria. Further, predictive functional profiling highlights the potential for the L. pertusa microbiome to contribute to chemoautotrophy, nutrient cycling, and antibiotic production.

Florida↗

Where lava meets the sea; Kilauea Volcano, Hawaii

Active volcanoes on the island of Hawai'i provide scientists with exceptional opportunities to observe volcanic phenomena at close range. Such an opportunity occurred on November 24, 1992, when geologists from the Hawaiian Volcano Observatory (HVO) witnessed spectacular explosive interactions between lava and seawater on the southeast coast of the island. As seawater invaded submarine conduits transporting milten lava, large steam explosions produced glowing fountains of lava that rose as high as 100m into the air and built a 7.5-m-high mound of volcanic ejecta called a littoral cone (see cover paragraphs). Seaside explosions of the type and magnitude of the event on November 24, 1992, are infrequent. the observation of this event represents a rare opportunity to enhance our understanding of the birth of littoral cones and the nature of explosive activity when lava enters the ocean.

Hawaii↗

Submarine ground-water discharge and fate along the coast of Kaloko-Honokohau National Historical Park, Island of Hawai'i: Part 2, spatial and temporal variations in salinity, radium-isotope activity, and nutrient concentrations in coastal waters, December 2003 - April 2006

The aquatic resources of Kaloko-Honokohau National Historical Park, including rocky shoreline, fishponds, and anchialine pools, provide habitat to numerous plant and animal species and offer recreational opportunities to local residents and tourists. A considerable amount of submarine groundwater discharge was known to occur in the park, and this discharge was suspected to influence the park's water quality. Thus, the goal of this study was to characterize spatial and temporal variations in the quality and quantity of groundwater discharge in the park. Samples were collected in December 2003, November 2005, and April 2006 from the coastal ocean, beach pits, three park observation wells, anchialine pools, fishponds, and Honokohau Harbor. The activities of two Ra isotopes commonly used as natural ground-water tracers (223Ra and 224Ra), salinity, and nutrient concentrations were measured. Fresh ground water composed a significant proportion (8-47 volume percent) of coastal-ocean water. This percentage varied widely between study sites, indicating significant spatial variation in submarine groundwater discharge at small (meter to kilometer) scales. Nitrate + nitrite, phosphate, and silica concentrations were significantly higher in nearshore coastal-ocean samples relative to samples collected 1 km or more offshore, and linear regression showed that most of this difference was due to fresh ground-water discharge. High-Ra-isotope-activity, higher-salinity springs were a secondary source of nutrients, particularly phosphate, at Honokohau Harbor and Aiopio Fishtrap. Salinity, Ra-isotope activity, and nutrient concentrations appeared to vary in response to the daily tidal cycle, although little seasonal variation was observed, indicating that submarine ground-water discharge may buffer the park's water quality against the severe seasonal changes that would occur in a system where freshwater inputs were dominated by rivers and runoff. Ra-isotope-activity ratios indicated that the residence time of water in the coastal ocean at the study sites was less than 1.6 days. We calculated water and nutrient fluxes into the coastal ocean at each study site. This study provides a baseline description of submarine ground-water discharge in Kaloko-Honokohau National Historical Park and its effect on the park's aquatic resources. We hope that it will allow park managers to better assess potential future changes in ground-water quality and quantity and conserve the park's valuable resources.

Hawaii↗

California State Waters map series — Offshore of Scott Creek, California

Introduction In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of high-resolution bathymetry, marine benthic habitats, and geology within the 3-nautical-mile limit of California’s State Waters. The CSMP approach is to create highly detailed seafloor maps through collection, integration, interpretation, and visualization of swath sonar data, acoustic backscatter, seafloor video, seafloor photography, high-resolution seismic-reflection profiles, and bottom-sediment sampling data. The map products display seafloor morphology and character, identify potential marine benthic habitats, and illustrate both the surficial seafloor geology and shallow subsurface geology. The Offshore of Scott Creek map area is located in central California, on the Pacific Coast about 65 km south of San Francisco and 12 km northwest of Santa Cruz. The onshore part of the map area is sparsely populated; the only cultural center is Davenport, a small community with a population of less than 500. The hilly coastal area is virtually undeveloped, and a large percentage of coastal land is incorporated in open-space trusts. Agricultural land is almost entirely limited to coastal areas between the shoreline and the northwest-trending Santa Cruz Mountains, on Pleistocene alluvial fan deposits and the lowest emergent marine terrace. The Santa Cruz Mountains are part of the northwest-trending Coast Ranges that run roughly parallel to the San Andreas Fault Zone. The map area is cut by the San Gregorio Fault Zone, and it lies a few kilometers southwest of the San Andreas Fault Zone. Regional folding and uplift along the coast has been attributed to a westward bend in the San Andreas Fault Zone and also to right-lateral movement along the San Gregorio Fault Zone. The irregular coastal geomorphology of this area, which consists of low, rocky cliffs and sparse, small pocket beaches backed by low, terraced hills, is partly attributable to this ongoing deformation. The shelf in the map area is underlain by variable amounts (0 to 25 m) of upper Quaternary shelf, nearshore, and fluvial sediments deposited as sea level fluctuated in the late Pleistocene. The northernmost part of the map area is characterized by the presence of uplifted bedrock that has been linked to a local transpressional zone in the San Gregorio Fault Zone. This uplift, coupled with high wave energy, has resulted in little or no sediment cover in this area where exposures of bedrock are present at water depths of as much as 45 m. The thickest deposits of sediment lie offshore of both Davenport and the mouth of Waddell Creek. Coastal sediment transport in the map area is characterized by north-to-south littoral transport of sediment that is derived mainly from streams in the Santa Cruz Mountains and also from local coastal erosion. Shoreline-change studies indicate long-term erosion; within the region between San Francisco and Davenport, the highest long- and short-term coastal-erosion rates occur north of the map area, just north of Point Año Nuevo. During the last approximately 300 years, as much as 18 million cubic yards (14 million cubic meters) of sand-sized sediment has been eroded from the area between Año Nuevo Island and Point Año Nuevo and transported south. Once widened by this pulse of eroded sediment, beaches in the map area are now narrowing as the tail end of this mass of sand progresses farther south. The Offshore of Scott Creek map area lies within the cold-temperate biogeographic zone that is called either the “Oregonian province” or the “northern California ecoregion.” This biogeographic province is maintained by the long-term stability of the southward-flowing California Current, the eastern limb of the North Pacific subtropical gyre that flows from southern British Columbia to Baja California. At its midpoint off central California, the California Current transports subarctic surface (0–500 m deep) waters southward, about 150 to 1,300 km from shore. Seasonal northwesterly winds that are, in part, responsible for the California Current, generate coastal upwelling. The south end of the Oregonian province is at Point Conception (about 320 km south of the map area), although its associated phylogeographic group of marine fauna may extend beyond to the area offshore of Los Angeles in southern California. The ocean off of central California has experienced a warming over the last 50 years that is driving an ecosystem shift away from the productive subarctic regime towards a depopulated subtropical environment. Seafloor habitats in the Offshore of Scott Creek map area, which lie within the Shelf (continental shelf) megahabitat, range from significant rocky outcrops that support kelp-forest communities nearshore to rocky-reef communities in deeper water. Biological productivity resulting from coastal upwelling supports populations of Sooty Shearwater, Western Gull, Common Murre, Cassin’s Auklet, and many other less populous bird species. In addition, an observable recovery of Humpback and Blue Whales has occurred in the area; both species are dependent on coastal upwelling to provide nutrients. The large extent of exposed inner shelf bedrock supports large forests of “bull kelp,” which is well adapted for high-wave-energy environments. The kelp beds are the northernmost known habitat for the population of southern sea otters. Common fish species found in the kelp beds and rocky reefs include lingcod and various species of rockfish and greenling.

California↗

Transgressive systems tract development and incised-valley fills within a quaternary estuary-shelf system: Virginia inner shelf, USA

High-frequency Quaternary glacioeustasy resulted in the incision of six moderate- to high-relief fluvial erosion surfaces beneath the Virginia inner shelf and coastal zone along the updip edges of the Atlantic continental margin. Fluvial valleys up to 5 km wide, with up to 37 m of relief and thalweg depths of up to 72 m below modern mean sea level, cut through underlying Pleistocene and Mio-Pliocene strata in response to drops in baselevel on the order of 100 m. Fluvially incised valleys were significantly modified during subsequent marine transgressions as fluvial drainage basins evolved into estuarine embayments (ancestral generations of the Chesapeake Bay). Complex incised-valley fill successions are bounded by, or contain, up to four stacked erosional surfaces (basal fluvial erosion surface, bay ravinement, tidal ravinement, and ebb-flood channel-base diastem) in vertical succession. These surfaces, combined with the transgressive oceanic ravinement that generally caps incised-valley fills, control the lateral and vertical development of intervening seismic facies (depositional systems). Transgressive stratigraphy characterizes the Quaternary section beneath the Virginia inner shelf where six depositional sequences (Sequences I-VI) are identified. Depositional sequences consist primarily of estuarine depositional systems (subjacent to the transgressive oceanic ravinement) and shoreface-shelf depositional systems; highstand systems tract coastal systems are thinly developed. The Quaternary section can be broadly subdivided into two parts. The upper part contains sequences consisting predominantly of inner shelf facies, whereas sequences in the lower part of the section consist predominantly of estuarine facies. Three styles of sequence preservation are identified. Style 1, represented by Sequences VI and V, is characterized by large estuarine systems (ancestral generations of the Chesapeake Bay) that are up to 40 m thick, have hemicylindrical wedge geometries, and occur within large, coast-oblique trending depressions (paleo-estuaries). Style 1 is dominated by fluvial through estuary-mouth depositional systems (Seismic Facies 1-4). Style 2 sequence preservation, represented by Sequences III and II, is dominantly an inner shelf and shoreface succession with a seaward-thickening tabular wedge geometry that does not exceed 15 m in thickness. These shoreface and inner shelf depositional systems of the upper transgressive systems tract (Seismic Facies 9) and highstand systems tract (Seismic Facies 7 and 11) are not associated with paleo-estuaries. Style 3 sequence preservation is represented by Sequence 1, the Holocene Sequence. It consists of lower transgressive systems tract fluvial-estuarine, lagoonal, and tidal-inlet fill deposits (Seismic Facies 1-6, and 8) overlain by upper transgressive systems tract shelf and shoreface sands (Seismic Facies 9). Style 3 has a crenulated wedge geometry, and is thickest beneath and seaward of the modern Chesapeake Bay mouth. It thins northward and landward onto Late Pleistocene interfluvial highs on the basinward side of the southern Delmarva Peninsula.

Marine Geology↗

Seabed photographs, sediment texture analyses, and sun-illuminated sea floor topography in the Stellwagen Bank National Marine Sanctuary region off Boston, Massachusetts

The U.S. Geological Survey, in collaboration with National Oceanic and Atmospheric Administration's National Marine Sanctuary Program, conducted seabed mapping and related research in the Stellwagen Bank National Marine Sanctuary region from 1993 to 2004. The mapped area is approximately 3,700 km (1,100 nmi) in size and was subdivided into 18 quadrangles. An extensive series of sea-floor maps of the region based on multibeam sonar surveys has been published as paper maps and online in digital format (PDF, EPS, PS). In addition, 2,628 seabed-sediment samples were collected and analyzed and are in the usSEABED: Atlantic Coast Offshore Surficial Sediment Data Release. This report presents for viewing and downloading the more than 10,600 still seabed photographs that were acquired during the project. The digital images are provided in thumbnail, medium (1536 x 1024 pixels), and high (3071 x 2048) resolution. The images can be viewed by quadrangle on the U.S. Geological Survey Woods Hole Coastal and Marine Science Center's photograph database. Photograph metadata are embedded in each image in Exchangeable Image File Format and also provided in spreadsheet format. Published digital topographic maps and descriptive text for seabed features are included here for downloading and serve as context for the photographs. An interactive topographic map for each quadrangle shows locations of photograph stations, and each location is linked to the photograph database. This map also shows stations where seabed sediment was collected for texture analysis; the results of grain-size analysis and associated metadata are presented in spreadsheet format.

Data Series↗

Pliocene shallow water paleoceanography of the North Atlantic ocean based on marine ostracodes

Middle Pliocene marine ostracodes from coastal and shelf deposits of North and Central America and Iceland were studied to reconstruct paleotemperatures of shelf waters bordering portions of the Western Boundary Current System (including the Gulf Loop Current, Florida Current, Gulf Stream and North Atlantic Drift). Factor analytic transfer functions provided Pliocene August and February bottom-water temperatures of eight regions from the tropics to the subfrigid. The results indicate: (1) meridional temperature gradients in the western North Atlantic were less steep during the Pliocene than either today or during Late Pleistocene Isotope Stage 5e; (2) tropical and subtropical shelf waters during the Middle Pliocene were as warm as, or slightly cooler than today; (3) slightly cooler water was on the outer shelf off the southeastern and mid-Atlantic coast of the U.S., possibly due to summer upwelling of Gulf Stream water; (4) the shelf north of Cape Hatteras, North Carolina may have been influenced by warm water incursions from the western edge of the Gulf Stream, especially in summer; (5) the northeast branch of the North Atlantic Drift brought warm water to northern Iceland between 4 and 3 Ma; evidence from the Iceland record indicates that cold East Greenland Current water did not affect coastal Iceland between 4 and 3 Ma; (6) Middle Pliocene North Atlantic circulation may have been intensified, transporting more heat from the tropics to the Arctic than it does today.

Quaternary Science Reviews↗

Constraints from GPS measurements on plate coupling within the Makran subduction zone and tsunami scenarios in the western Indian Ocean

Plate-coupling estimates and previous seismicity indicate that portions of the Makran megathrust of southern Pakistan and Iran are partially coupled and have the potential to produce future magnitude 7+ earthquakes. However, the GPS observations needed to constrain coupling models are sparse and lead to an incomplete understanding of regional earthquake and tsunami hazard. In this study, we assess GPS velocities for plate coupling of the Makran subduction zone with specific attention to model resolution and the accretionary prism rheology. We use finite element model-derived Green's functions to invert for the interseismic slip deficit under both elastic and viscoelastic Earth assumptions. We use the model resolution matrix to characterize plate-coupling scenarios that are consistent with the limited spatial resolution afforded by GPS observations. We then forward model the corresponding tsunami responses at major coastal cities within the western Indian Ocean basin. Our plate-coupling results show potential segmentation of the megathrust with varying coupling from west to east, but do not rule out a scenario where the entire length of the megathrust could rupture in a single earthquake. The full subduction zone rupture scenarios suggest that the Makran may be able to produce earthquakes up to M w 9.2. The corresponding tsunami model from the largest earthquake event ( M w 9.2) estimates maximum wave heights reaching 2–5 m at major port cities in the northern Arabian Sea region. Cities on the west coast of India are less affected (1–2 m). Coastlines bounding eastern Africa, and the Strait of Hormuz, are the least affected (<1 m).

Geophysical Journal International↗

Terrestrial LIDAR investigation of the December 2003 and January 2007 activations of the Northridge Bluff landslide, Daly City, California

On December 20, 2003 and again on January 1, 2007, landslides occurred along the coastal bluff that forms the west boundary of Daly City, California sending debris as far as 290 meters downhill and 90 meters into the ocean. This area is known for large landslide events where 150-meter tall coastal bluffs extend southward along the west boundary of San Francisco and San Mateo Counties (Fig. 1). The 2003 and 2007 landslide events occurred west of Northridge Drive in Daly City and just south of Avalon Canyon, which bisects the bluffs in this area (Fig. 2). Residential development, utility lines and roads occupy the land immediately east of this location. As part of a comprehensive project to investigate the failure mechanisms of coastal bluff landslides in weakly lithified sediments along the west coast of the United States, members of the U.S. Geologic Survey (USGS) Coastal and Marine Geology (CMG) Program performed reconnaissance mapping of these landslide events including collection of high-resolution topographic data using CMG's terrestrial LIDAR laser scanning system. This report provides a brief background on each landslide event and presents topographic datasets collected following each event. Downloadable contour data, images, and FGDC-compliant metadata of the surfaces generated from the LIDAR data are also provided. LIDAR data collection and processing techniques used to generate the datasets are outlined. Geometric and volumetric measurements are also presented along with high-resolution cross-sections through various areas of the slide masses and discussion concerning the slides present (2007) configuration is provided.

California↗

California State Waters Map Series — Offshore of Half Moon Bay, California

In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of high-resolution bathymetry, marine benthic habitats, and geology within the 3-nautical-mile limit of California’s State Waters. The CSMP approach is to create highly detailed seafloor maps through collection, integration, interpretation, and visualization of swath sonar data, acoustic backscatter, seafloor video, seafloor photography, high-resolution seismic-reflection profiles, and bottom-sediment sampling data. The map products display seafloor morphology and character, identify potential marine benthic habitats, and illustrate both the surficial seafloor geology and shallow (to about 100 m) subsurface geology. The Offshore of Half Moon Bay map area is located in northern California, on the Pacific coast of the San Francisco Peninsula about 40 kilometers south of the Golden Gate. The city of Half Moon Bay, which is situated on the east side of the Half Moon Bay embayment, is the nearest significant onshore cultural center in the map area, with a population of about 11,000. The Pillar Point Harbor at the north edge of Half Moon Bay offers a protected landing for boats and provides other marine infrastructure. The map area lies offshore of the Santa Cruz Mountains, part of the northwest-trending Coast Ranges that run roughly parallel to the San Andreas Fault Zone. The Santa Cruz Mountains lie between the San Andreas Fault Zone and the San Gregorio Fault system. The flat coastal area, which is the most recent of numerous marine terraces, was formed by wave erosion about 105 thousand years ago. The higher elevation of this same terrace west of the Half Moon Bay Airport is caused by uplift on the Seal Cove Fault, a splay of the San Gregorio Fault Zone. Although originally incised into the rising terrain horizontally, the ancient terrace surface has been gently folded into a northwest-plunging syncline by compression related to right-lateral strike-slip movement along the San Gregorio Fault Zone. The lowest elevation coincides with the deepest part of Half Moon Bay; the terrace surface rises both to the north and to the south. Uplift in this map area has resulted in relatively shallow water depths within California’s State Waters and, thus, little accommodation space for sediment accumulation. Sediment is observed in the shelter of Half Moon Bay and on the outer half of the California’s State Waters shelf. Sediment in the area is mobile, often forming dunes and sand waves. A westward bend in the San Andreas Fault Zone, southeast of the map area, coupled with right-lateral movement along the Seal Cove Fault, which comes ashore in Pillar Point Harbor, has resulted in the folding and uplifting of sedimentary rocks of the Purisima Formation in the offshore. Differential erosion of these folded and faulted layers of the Purisima Formation has exposed the parallel curved-rock ridges that are visible on the seafloor from the headland at Pillar Point. During the winter, strong North Pacific storms generate large, long-period waves that shoal and break over this bedrock reef at the world-famous surfing location known as Mavericks. The Offshore of Half Moon Bay map area lies within the cold-temperate biogeographic zone that is called either the “Oregonian province” or the “northern California ecoregion.” This biogeographic province is maintained by the long-term stability of the southward-flowing California Current, an eastern limb of the North Pacific subtropical gyre that flows from Oregon to Baja California. At its midpoint off central California, the California Current transports subarctic surface (0–500 m deep) waters southward, about 150 to 1,300 km from shore. Seasonal northwesterly winds that are, in part, responsible for the California Current, generate coastal upwelling. The south end of the Oregonian province is at Point Conception (about 365 km south of the map area), although its associated phylogeographic group of marine fauna may extend beyond to the area offshore of Los Angeles in southern California. The ocean off central California has experienced a warming over the last 50 years that is driving an ecosystem shift away from the productive subarctic regime towards a depopulated subtropical environment. Seafloor habitats in the Offshore of Half Moon Bay map area, which lies within the Shelf (continental shelf) megahabitat, range from significant rocky outcrops that support kelp-forest communities nearshore to rocky-reef communities in deep water. Biological productivity resulting from coastal upwelling supports populations of sea birds such as Sooty Shearwater, Western Gull, Common Murre, Cassin’s Auklet, and many other less populous bird species. In addition, an observable recovery of Humpback and Blue Whales has occurred in the area; both species are dependent on coastal upwelling to provide nutrients. The large extent of exposed inner shelf bedrock supports large forests of “bull kelp,” which is well adapted for high wave-energy environments. Common fish species found in the kelp beds and rocky reefs include lingcod and various species of rockfish and greenling.

California↗

California State Waters Map Series — Offshore of San Gregorio, California

In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of high-resolution bathymetry, marine benthic habitats, and geology within the 3-nautical-mile limit of California's State Waters. The CSMP approach is to create highly detailed seafloor maps through collection, integration, interpretation, and visualization of swath sonar data, acoustic backscatter, seafloor video, seafloor photography, high-resolution seismic-reflection profiles, and bottom-sediment sampling data. The map products display seafloor morphology and character, identify potential marine benthic habitats, and illustrate both the surficial seafloor geology and shallow (to about 100 m) subsurface geology. The Offshore of San Gregorio map area is located in northern California, on the Pacific coast of the San Francisco Peninsula about 50 kilometers south of the Golden Gate. The map area lies offshore of the Santa Cruz Mountains, part of the northwest-trending Coast Ranges that run roughly parallel to the San Andreas Fault Zone. The Santa Cruz Mountains lie between the San Andreas Fault Zone and the San Gregorio Fault system. The nearest significant onshore cultural centers in the map area are San Gregorio and Pescadero, both unincorporated communities with populations well under 1,000. Both communities are situated inland of state beaches that share their names. No harbor facilities are within the Offshore of San Gregorio map area. The hilly coastal area is virtually undeveloped grazing land for sheep and cattle. The coastal geomorphology is controlled by late Pleistocene and Holocene slip in the San Gregorio Fault system. A westward bend in the San Andreas Fault Zone, southeast of the map area, coupled with right-lateral movement along the San Gregorio Fault system have caused regional folding and uplift. The coastal area consists of high coastal bluffs and vertical sea cliffs. Coastal promontories in the northern and southern parts of the map area are the result of right-lateral motion on strands of the San Gregorio Fault system. In the south, headlands near Pescadero Point have been uplifted by motion along the west strand of the San Gregorio Fault (also called the Frijoles Fault), which separates rocks of the Pigeon Point Formation south of the fault from rocks of the Purisima Formation north of the fault. The regional uplift in this map area has caused relatively shallow water depths within California's State Waters and, thus, little accommodation space for sediment accumulation. Sediment is observed offshore in the central part of the map area, in the shelter of the headlands north of the east strand of the San Gregorio Fault (also called the Coastways Fault) around Miramontes Point (about 5 km north of the map area) and also on the outer half of the California's State Waters shelf in the south where depths exceed 40 m. Sediment in the outer shelf of California's State Waters is rippled, indicating some mobility. The Offshore of San Gregorio map area lies within the cold-temperate biogeographic zone that is called either the "Oregonian province" or the "northern California ecoregion." This biogeographic province is maintained by the long-term stability of the southward-flowing California Current, an eastern limb of the North Pacific subtropical gyre that flows from Oregon to Baja California. At its midpoint off central California, the California Current transports subarctic surface (0–500 m deep) waters southward, about 150 to 1,300 km from shore. Seasonal northwesterly winds that are, in part, responsible for the California Current, generate coastal upwelling. The south end of the Oregonian province is at Point Conception (about 350 km south of the map area), although its associated phylogeographic group of marine fauna may extend beyond to the area offshore of Los Angeles in southern California. The ocean off of central California has experienced a warming over the last 50 years that is driving an ecosystem shift away from the productive subarctic regime towards a depopulated subtropical environment. Seafloor habitats in the Offshore of San Gregorio map area, which lies within the Shelf (continental shelf) megahabitat, range from significant rocky outcrops that support kelp-forest communities nearshore to rocky-reef communities in deep water. Biological productivity resulting from coastal upwelling supports diverse populations of sea birds such as Sooty Shearwater, Western Gull, Common Murre, Cassin's Auklet, and many other less populous bird species. In addition, an observable recovery of Humpback and Blue Whales has occurred in the area; both species are dependent on coastal upwelling to provide nutrients. The large extent of exposed inner shelf bedrock supports large forests of "bull kelp," which is well adapted for high wave-energy environments. Common fish species found in the kelp beds and rocky reefs include lingcod and various species of rockfish and greenling.

California↗

One shell of a problem: Cumulative threat analysis of male sea turtles indicates high anthropogenic threat for migratory individuals and Gulf of Mexico residents

Human use of oceans has dramatically increased in the 21st century. Sea turtles are vulnerable to anthropogenic stressors in the marine environment because of lengthy migrations between foraging and breeding sites, often along coastal migration corridors. Little is known about how movement and threat interact specifically for male sea turtles. To better understand male sea turtle movement and the threats they encounter, we satellite-tagged 40 adult male sea turtles of four different species. We calculated movement patterns using state-space modeling (SSM), and quantified threats in seven unique categories; shipping, fishing, light pollution, oil rigs, proximity to coast, marine protected area (MPA) status, and location within or outside of the U.S. Exclusive Economic Zone (EEZ). We found significantly higher threat severity in northern and southern latitudes for green turtles ( Chelonia mydas ) and Kemp’s ridleys ( Lepidochelys kempii ) in our study area. Those threats were pervasive, with only 35.9% of SSM points encountering no high threat exposure, of which 47% belong to just two individuals. Kemp’s ridleys were most exposed to high threats among tested species. Lastly, turtles within MPA boundaries face significantly lower threat exposure, indicating MPAs could be a useful conservation tool.

Remote Sensing↗

California State Waters map series — Offshore of Pigeon Point, California

Introduction In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of high-resolution bathymetry, marine benthic habitats, and geology within the 3-nautical-mile limit of California&rsquo;s State Waters. The CSMP approach is to create highly detailed seafloor maps through collection, integration, interpretation, and visualization of swath sonar data, acoustic backscatter, seafloor video, seafloor photography, high-resolution seismic-reflection profiles, and bottom-sediment sampling data. The map products display seafloor morphology and character, identify potential marine benthic habitats, and illustrate both the surficial seafloor geology and shallow subsurface geology. The Offshore of Pigeon Point map area is located in central California, on the Pacific Coast about 50 km south of San Francisco and 25 km northwest of Santa Cruz. The onshore part of the map area is sparsely populated. The nearest significant onshore cultural center is Pescadero, an unincorporated community with a population of well under 1,000. The hilly coastal area is virtually undeveloped, used primarily for agricultural or as grazing land for sheep and cattle. Agriculture is limited to the coastal uplifted Pleistocene marine terraces and upper Pleistocene alluvial fan deposits, which lie between the shoreline and the northwest-trending Santa Cruz Mountains. The map area is cut by the San Gregorio Fault Zone, and is located a few kilometers southwest of the San Andreas Fault Zone. Coastal uplift and folding in the map area has been attributed to a westward bend in the San Andreas Fault Zone and also to right-lateral movement along the San Gregorio Fault Zone. The irregular coastal geomorphology of this area, which consists of low, rocky cliffs and sparse, small pocket beaches backed by low, terraced hills, is partly attributable to this ongoing deformation. The shelf in the map area is underlain by variable amounts (0 to 20 m) of upper Quaternary nearshore and shelf sediments deposited as sea level fluctuated in the late Pleistocene. The southern part of the map is characterized by the presence of uplifted bedrock that has been linked to a local zone of transpression in the San Gregorio Fault Zone. This uplift, coupled with high wave energy, has resulted in little or no sediment cover in this area where exposures of bedrock are present at water depths of as much as 45 m. The thickest deposits of sediment are located in the northern part of the map area. Coastal sediment transport in the map area is characterized by north-to-south littoral transport of sediment that is derived mainly from streams in the Santa Cruz Mountains and also from local coastal erosion. Shoreline-change studies indicate long-term erosion; within the region between San Francisco and Davenport, the highest long- and short-term coastal-erosion rates occur in the map area, just north of Point A&ntilde;o Nuevo. During the last approximately 300 years, as much as 18 million cubic yards (14 million cubic meters) of sand-sized sediment has been eroded from the area between A&ntilde;o Nuevo Island and Point A&ntilde;o Nuevo and transported south. Once widened by this pulse of eroded sediment, beaches south of Point A&ntilde;o Nuevo are now narrowing as the tail end of this mass of sand progresses farther south. The Offshore of Pigeon Point map area lies within the cold-temperate biogeographic zone that is called either the &ldquo;Oregonian province&rdquo; or the &ldquo;northern California ecoregion.&rdquo; This biogeographic province is maintained by the long-term stability of the southward-flowing California Current, the eastern limb of the North Pacific subtropical gyre that flows from southern British Columbia to Baja California. At its midpoint off central California, the California Current transports subarctic surface (0&ndash;500 m deep) waters southward, about 150 to 1,300 km from shore. Seasonal northwesterly winds that are, in part, responsible for the California Current, generate coastal upwelling. The south end of the Oregonian province is at Point Conception (about 335 km south of the map area), although its associated phylogeographic group of marine fauna may extend beyond to the area offshore of Los Angeles in southern California. The ocean off of central California has experienced a warming over the last 50 years that is driving an ecosystem shift away from the productive subarctic regime towards a depopulated subtropical environment. Seafloor habitats in the Offshore of Pigeon Point map area lie within the Shelf (continental shelf) megahabitat. Significant rocky outcrops, which support kelp-forest communities in the nearshore and rocky-reef communities in deeper water, dominate the inner shelf waters. Biological productivity resulting from coastal upwelling supports populations of Sooty Shearwater, Western Gull, Common Murre, Cassin&rsquo;s Auklet, and many other less populous bird species. In addition, an observable recovery of Humpback and Blue Whales has occurred in the area; both species are dependent on coastal upwelling to provide nutrients. The large extent of exposed inner shelf bedrock supports large forests of &ldquo;bull kelp,&rdquo; which is well adapted for high-wave-energy environments. Common fish species found in the kelp beds and rocky reefs include lingcod and various species of rockfish and greenling.

California↗

Chemical variations across the Alaska-Aleutian Range batholith

A study of 79 chemical analyses of plutonic rocks in the northern part of the Alaska-Aleutian Range batholith shows that K 2 O and SiO 2 in Late Cretaceous and Tertiary rocks decrease toward the Pacific margin and that Al 2 O 3 and CaO increase. Plots for Fe 2 O 3 , FeO, MgO, and TiO 2 suggest a possible increase toward the Pacific margin; Na 2 O, H 2 O+, and MnO show no significant trends across the batholith. Oxide trends for groups of plutons in the western and eastern parts of the batholith in general are opposite that of the groups combined. For the Jurassic plutonic rocks, K 2 O may decrease toward the Pacific margin; other oxides show considerable scatter, and meaningful trends are not readily apparent. The oxide trends across the batholith are similar to trends across the central Sierra Nevada batholith of California, with the exception of SiO 2 and A1 2 O 3 , which show no significant changes. In the Coast Range batholith of British Columbia, potassium also increases away from the Pacific margin. The increase in K 2 O toward the continent in the Alaska-Aleutian Range batholith is similar to that found across Quaternary volcanic island arcs, where K 2 O content increases directly with increasing depth to inclined seismic zones. This increase suggests that generation of magma may have taken place along, or above, a paleoseismic zone. Geologic evidence supports such a model for the Jurassic plutonic rocks, which represent the roots of an early Mesozoic magmatic arc that probably formed above a descending oceanic plate. However, the hypothesis that magma for Late Cretaceous and Tertiary plutonic rocks was generated along seismic zones does not fit available geologic evidence, and an anatectic model cannot be ruled out.

Alaska↗

A mid-Permian chert event: Widespread deposition of biogenic siliceous sediments in coastal, island arc and oceanic basins

Radiolarian and conodont of Permian siliceous rocks from twenty-three areas in teh the circum-Pacific and Mediterranean regions reveal a widespread Permian Chert Event during the middle Leonardian to Wordian. Radiolarian- and (or) sponge spicule-rich siliceous sediments accumulated beneath high productivity zones in coastal, island arc and oceanic basins. Most of these deposits now crop out in fault-bounded accreted terranes. Biogenic siliceous sediments did not accumulate in terranes lying beneath infertile waters including the marine sequences in terranes of northern and central Alaska. The Permian Chert Event is coeval with major phosphorite deposition along the western margin of Pangea (Phosphoria Formation and related deposits). A well-known analogue for this event is middle Miocene deposition of biogenic siliceous sediments beneath high productivity zones in many parts of the Pacific and concurrent deposition of phosphatic as well as siliceous sediments in basins along the coast of California. Interrelated factors associated with both the Miocene and Permian depositional events include plate reorientations, small sea-level rises and cool polar waters.

western North America↗

Groundwater-derived nutrient and trace element transport to a nearshore Kona coral ecosystem: Experimental mixing model results

Study region The groundwater influenced coastal waters along the arid Kona coast of the Big Island, Hawai’i. Study focus A salinity-and phase partitioning-based mixing experiment was constructed using contrasting groundwater endmembers along the arid Konacoast of the Big Island, Hawai’i and local open seawater to better understand biogeochemical and physicochemical processes that influence the fate of submarine groundwater discharge (SGD)-derived nutrients and trace elements. New Hydrological Insights for the Region Treated wastewater effluent was the main source for nutrient enrichment downstream at the Honokōhau Harbor site. Conservative mixing for some constituents, such as nitrate + nitrite, illustrate the effectiveness of physical mixing to maintain oceanic concentrations in the colloid (0.02–0.45 μm) and truly dissolved (

Hawaii↗

Marine recreation and public health microbiology: Quest for the ideal indicator

Four-fifths of the population of the United States live in close proximity to the oceans or Great Lakes, and approximately 100 million Americans use the marine environment for recreation each year ( Thurman 1994 ). Consequently, contamination of lakes, rivers, and coastal waters raises significant public health issues. Among the leading sources of chemical and biological contamination of these waters and associated beaches are sewer systems, septic tanks, stormwater runoff, industrial wastes, wastewater injection wells, cesspits, animal wastes, commercial and private boat wastes, and human recreation. In 1997, 649 beach closings or advisories were caused by sewage spills and overflows ( NRDC 1998 ). In Florida alone, approximately 500 million gallons of sewage were released along the coast each year during the late 1980s ( Neshyba 1987 ). Thus one of the primary concerns in public health is the risk that humans using the marine environment for recreational activities will encounter microbial pathogens.

BioScience↗

Five-year external reviews of the eight Department of Interior Climate Science Centers: Southeast Climate Science Center

In 2008, the U.S. Congress authorized the establishment of the National Climate Change and Wildlife Science Center (NCCWSC) within the U.S. Department of Interior (DOI). Housed administratively within the U.S. Geological Survey (USGS), NCCWSC is part of the DOI’s ongoing mission to meet the challenges of climate change and its effects on wildlife and aquatic resources. From 2010 through 2012, NCCWSC established eight regional DOI Climate Science Centers (CSCs). Each of these regional CSCs operated with the mission to “synthesize and integrate climate change impact data and develop tools that the Department’s managers and partners can use when managing the Department’s land, water, fish and wildlife, and cultural heritage resources” (Salazar 2009). The model developed by NCCWSC for the regional CSCs employed a dual approach of a federal USGS-staffed component and a parallel host-university component established competitively through a 5-year cooperative agreement with NCCWSC. At the conclusion of this 5-year agreement, a review of each CSC was undertaken, with the Southeast Climate Science Center (SE CSC) review in February 2016. The SE CSC is hosted by North Carolina State University (NCSU) in Raleigh, North Carolina, and is physically housed within the NCSU Department of Applied Ecology along with the Center for Applied Aquatic Ecology, the North Carolina Cooperative Fish and Wildlife Research Unit (CFWRU), and the North Carolina Agromedicine Institute. The U.S. Department of Agriculture Southeast Regional Climate Hub is based at NCSU as is the National Oceanic and Atmospheric Administration (NOAA) Southeast Regional Climate Center, the North Carolina Institute for Climate Studies, the North Carolina Wildlife Resources Commission, the NOAA National Weather Service, the State Climate Office of North Carolina, and the U.S. Forest Service Eastern Forest Environmental Threat Assessment Center. This creates a strong core of organizations operating in close proximity focused on climate issues. The geographic area covered by the SE CSC represents all or part of 16 states and the Caribbean Islands and has overlapping boundaries with seven Landscape Conservation Cooperatives (LCCs): Appalachian LCC, Eastern Tallgrass Prairie and Big Rivers LCC, Gulf Coast Prairie LCC, Gulf Coastal Plains and Ozarks LCC, Peninsular Florida LCC, South Atlantic LCC, and Caribbean LCC. The SE CSC region also encompasses 134 U.S. Fish and Wildlife Service refuges and 89 National Park Service (NPS) units and is home to 11 federally recognized and 54 state recognized tribes.

Report↗