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At least 541 records · Page 30Linked to original sources
USGS2021

Augmentation of natural prey reduces cattle predation by puma (Puma concolor) and jaguar (Panthera onca) on a ranch in Sonora, Mexico

Retaliatory killing of large carnivores due to livestock predation is one of the major threats for the conservation of many declining populations of predators. According to empirical observations, there is a higher incidence of livestock predation when native prey abundance is low. In this study, we applied a treatment consisting of augmentation of prey abundance by translocation of peccaries ( Pecari tajacu ) and placement of four feed stations for white-tailed deer ( Odocoileus virginianus ) on a cattle ranch in Sonora, Mexico, with verified calf predation by puma ( Puma concolor ) and jaguar ( Panthera onca ). We quantified and compared consumed prey over two periods—phase I (8 months before the augmentation of prey) and phase II (8 months after the augmentation of prey)—through investigation of kill sites from Global Positioning System–collared jaguar and puma, prey identification from analyzed scat using molecular DNA techniques, and opportunistic discoveries of recently killed animal remains by either predator. We calculated the relative abundance of species (17 mammals [one species with two distinct age classes] and 1 bird species) through camera traps and for the most relevant prey species for this study (deer, calf, and peccary), we also estimated prey use by the predator, based on their availability during each period (prey preference). In the prey composition analyses of scat, we observed a significant reduction in the consumption of bovids and a significant increase in the consumption of peccaries during phase II. In the analyses of prey use, during phase I, predators consumed peccaries and calves at a higher proportion in relation to their availability. During phase II, consumption of calves declined from being preferred, to being consumed at the same proportion as their availability. Application of these results can contribute to the decrease of livestock predation and therefore conservation of pumas and jaguars.

Sonora↗
USGS2015

Linking resource selection and mortality modeling for population estimation of mountain lions in Montana

To be most effective, the scale of wildlife management practices should match the range of a particular species’ movements. For this reason, combined with our inability to rigorously or regularly census mountain lion populations, several authors have suggested that mountain lions be managed in a source-sink or metapopulation framework. We used a combination of resource selection functions, mortality estimation, and dispersal modeling to estimate cougar population levels in Montana statewide and potential population level effects of planned harvest levels. Between 1980 and 2012, 236 independent mountain lions were collared and monitored for research in Montana. From these data we used 18,695 GPS locations collected during winter from 85 animals to develop a resource selection function (RSF), and 11,726 VHF and GPS locations from 142 animals along with the locations of 6343 mountain lions harvested from 1988–2011 to validate the RSF model. Our RSF model validated well in all portions of the State, although it appeared to perform better in Montana Fish, Wildlife and Parks (MFWP) Regions 1, 2, 4 and 6, than in Regions 3, 5, and 7. Our mean RSF based population estimate for the total population (kittens, juveniles, and adults) of mountain lions in Montana in 2005 was 3926, with almost 25% of the entire population in MFWP Region 1. Estimates based on a high and low reference population estimates produce a possible range of 2784 to 5156 mountain lions statewide. Based on a range of possible survival rates we estimated the mountain lion population in Montana to be stable to slightly increasing between 2005 and 2010 with lambda ranging from 0.999 (SD = 0.05) to 1.02 (SD = 0.03). We believe these population growth rates to be a conservative estimate of true population growth. Our model suggests that proposed changes to female harvest quotas for 2013–2015 will result in an annual statewide population decline of 3% and shows that, due to reduced dispersal, changes to harvest in one management unit may affect population growth in neighboring units where smaller or even no changes were made. Uncertainty regarding dispersal levels and initial population density may have a significant effect on predictions at a management unit scale (i.e. 2000 km 2 ), while at a regional scale (i.e. 50,000 km 2 ) large differences in initial population density result in relatively small changes in population growth rate, and uncertainty about dispersal may not be as influential. Doubling the presumed initial density from a low estimation of 2.19 total animals per 100 km 2 resulted in a difference in annual population growth rate of only 2.6% statewide when compared to high density of 4.04 total animals per 100 km 2 (low initial population estimate λ = 0.99, while high initial population estimate λ = 1.03). We suggest modeling tools such as this may be useful in harvest planning at a regional and statewide level.

Ecological Modelling↗
USGS2013

Fort Collins Science Center Ecosystem Dynamics branch--interdisciplinary research for addressing complex natural resource issues across landscapes and time

The Ecosystem Dynamics Branch of the Fort Collins Science Center offers an interdisciplinary team of talented and creative scientists with expertise in biology, botany, ecology, geology, biogeochemistry, physical sciences, geographic information systems, and remote-sensing, for tackling complex questions about natural resources. As demand for natural resources increases, the issues facing natural resource managers, planners, policy makers, industry, and private landowners are increasing in spatial and temporal scope, often involving entire regions, multiple jurisdictions, and long timeframes. Needs for addressing these issues include (1) a better understanding of biotic and abiotic ecosystem components and their complex interactions; (2) the ability to easily monitor, assess, and visualize the spatially complex movements of animals, plants, water, and elements across highly variable landscapes; and (3) the techniques for accurately predicting both immediate and long-term responses of system components to natural and human-caused change. The overall objectives of our research are to provide the knowledge, tools, and techniques needed by the U.S. Department of the Interior, state agencies, and other stakeholders in their endeavors to meet the demand for natural resources while conserving biodiversity and ecosystem services. Ecosystem Dynamics scientists use field and laboratory research, data assimilation, and ecological modeling to understand ecosystem patterns, trends, and mechanistic processes. This information is used to predict the outcomes of changes imposed on species, habitats, landscapes, and climate across spatiotemporal scales. The products we develop include conceptual models to illustrate system structure and processes; regional baseline and integrated assessments; predictive spatial and mathematical models; literature syntheses; and frameworks or protocols for improved ecosystem monitoring, adaptive management, and program evaluation. The descriptions in this fact sheet provide snapshots of our three research emphases, followed by descriptions of select current projects.

Fact Sheet↗
USGS2019

Effects of short-term, outdoor head-starting on growth and survival in the mojave desert tortoise (gopherus agassizii)

The combination of life-history traits that makes some turtle species vulnerable to population declines also limits their ability to recover even after threats have been addressed. Because juvenile turtle survival is typically lower than adult survival, head-starting, the process of rearing juveniles through one of their most vulnerable periods, may be a useful recovery tool. We evaluated short-term, outdoor head-starting in Mojave Desert Tortoises ( Gopherus agassizii ) by comparing growth and survival among three treatments: (1) juveniles reared in outdoor predator-resistant enclosures and receiving low (LOW) or (2) high levels of rain supplementation (HIGH); and (3) free-ranging animals released 0-18 mo after hatching (FIELD). Juveniles from the HIGH treatment had higher annual growth (12.7 mm midline carapace length [MCL] per year) than juveniles from the LOW or FIELD treatments (10.7 mm). Annual growth also varied among years, presumably due to variation in rainfall. Annual survival was high (0.94 ± 0.01) for both LOW and HIGH treatments; MCL at hatching had a weak positive effect on survival probability (effect size: 0.42 ± 0.35). Annual survival of FIELD animals averaged 0.48 ± 0.09. There was no effect of size at release (40.8-61.5 mm MCL) on post-release survival of FIELD animals, suggesting that the greatest benefit of short-term outdoor head-starting is increasing survival during the head-start period. Although releasing at larger sizes (100 mm MCL) has been recommended, slow growth in tortoises would require extended outdoor head-starting periods. Indoor rearing, which has been successfully implemented with other turtle species, may increase growth rates of juvenile Desert Tortoises and warrants future study as a conservation technique.

Herpetological Conservation and Biology↗
USGS2026

Ecology of reintroduced Rocky Mountain bighorn sheep in Dinosaur National Monument

Translocations have been widely used to restore and conserve bighorn sheep ( Ovis canadensis ) populations in North America. Some translocations have been successful, but many populations remain small and genetically isolated. Population structure can influence the viability and long-term success of reintroductions. Social ungulates often function as interconnected subpopulations (metapopulations); however, few studies evaluate subpopulation sizes, connectivity, and genetic diversity within metapopulations. To address this gap, we conducted a comprehensive study of a reintroduced Rocky Mountain bighorn sheep ( Ovis canadensis canadensis ) population in Dinosaur National Monument in Colorado and Utah, USA, between 2006–2020. We analyzed global positioning system (GPS) radio-collar data, genetic samples, and results of health testing to evaluate abundance, distribution, genetic structure and diversity, habitat use, movement and connectivity, and presence of or exposure to respiratory pathogens. We integrated these analyses to evaluate the outcomes of a reintroduction effort that began in 1952, over 70 years ago, and to inform management decisions in Dinosaur National Monument. We also provide a framework for evaluating metapopulation processes, including a non-invasive approach that links genetic structure with Bayesian spatial capture-recapture analyses to estimate subpopulation sizes. Despite models indicating continuous suitable habitat, we found a spatially structured population with at least 4 subpopulations with constrained connectivity. Evidence from step selection and density analyses suggested that movement among subpopulations may be limited by semi-permeable barriers including rivers and human disturbance, which could contribute to maintenance of spatial structure over time. In 2006, antibody to Mycoplasma ovipneumoniae was detected in all geographically and genetically distinct subpopulations. Widespread clinical signs of disease and a confirmed exposure to M. ovipneumoniae in 2019 indicate a long-term disease challenge. Proximity to domestic sheep creates repeated opportunities for introduction of new M. ovipneumoniae strains. We estimated abundance in 2019 at 109 (95% CrI = 87–133), composed of subpopulations ranging from 18–39 animals (95% CrIs from 11–50). Genetic diversity was relatively high compared to other reintroduced and native Rocky Mountain bighorn sheep populations, which is likely a consequence of multiple translocations from different sources. Three of 4 subpopulation centers generally aligned with the locations of original translocation release sites. Persistence in the presence of pathogens may be facilitated by metapopulation structure and moderately high genetic diversity. Conversely, metapopulation structure can also facilitate pathogen persistence. Our approach offers a path to advance understanding of the population ecology of reintroduced bighorn sheep and can inform effective conservation and management of their populations.

Colorado, Wyoming↗
USGS2001

Coastal sage scrub case study

In ecological applications of large-scale spatial data to management decisions concerning land planning and conservation, errors and biases may creep into the analysis and decision making at several steps (see Chaps. 1, 2, and 3), including: • Uncertainty in positions of spatial locations of relevant ecological and physiographic features of the landscape. • Uncertainty of the type and attributes of land cover at a particular location. • Uncertainty in how different land covers at a position in space and the geometric arrangement of land covers nearby might influence an animal species occurrence or distribution, or the magnitude of some ecological process. • Uncertainty about the relative importance of each spatial location to the overall success or persistence of a population or ecological process. • Uncertainty about how to weight each species or ecological process in determining the overall biodiversity and functioning of ecosystems, local and national resource priorities, and consistency with legislative mandates. We would like to be able to quantify the errors at each step, identify biases, and pass these along to the next analysis step so that our degree of uncertainty regarding potential outcomes is evident at each level (e.g., Stoms et al. 1992).

Book chapter↗
USGS1993

Snaring to control feral pigs sus scrofa in a remote Hawaiian rain forest

Feral pig Sus scrofa control in Kipahulu Valley, a remote rain forest in Haleakala National Park, Maui, Hawaiian Islands, has been achieved with snares over a 45-month period. Initial pig densities in fenced management units of 6·2 km 2 and 7·8 km 2 were estimated at 6 animals/km 2 and 14·3 animals/km 2 for the two units, based on population reconstruction from animals killed and aged. During the 45 months of the study, 1978 snares were set, and 1·6 million snare nights were logged. Snare density reached 96/km 2 and 200/km 2 for the two management units by the end of the study. A mean effort of 43 worker hours/pig was used to remove 53 pigs from the upper management unit, and a mean of 7 worker hours/pig to remove 175 animals from the more densely populated lower unit. Pig activity monitoring along transects provided a good measure of control effectiveness until densities of about 1 pig/km 2 were achieved, after which transects became less useful than scouting for determining pig activity.

Hawai'i↗
USGS2026

Space between houses influences movement and habitat selection of ungulates: Width as a novel metric of development

Wildlife often lose access to habitat due to housing development. The magnitude of indirect habitat loss can be conditional on the configuration of individual houses, but commonly used metrics (i.e. density or distance) can overlook the configuration of development. We introduce a novel framework to index the configuration of development based on the width of space between houses and associated structures. We use resource selection functions to assess the degree that GPS-collared elk ( Cervus canadensis ), mule deer ( Odocoileus hemionus ), pronghorn and moose ( Alces alces ) on winter range and on migration routes use space between houses within northwest Wyoming, USA, near the towns of Cody and Jackson. Further, to help inform regulations aiming to promote wildlife movement across a gradient of land uses, we differentiated between individuals residing in primarily rural and exurban areas. Rural populations of elk, mule deer, pronghorn and moose avoided spaces narrower than 2 km and never used spaces narrower than 50 m between houses, whereas exurban populations of elk, mule deer and moose selected for spaces narrower than 2 km but avoided spaces narrower than 50 m. We identified cutoffs in rural and exurban areas where space may become too narrow for most animals to use. Through this metric, managers and policy makers can inform the necessary width to maintain wildlife movement through corridors. Our width metric can be applied to other systems and our workflow is publicly available ( https://wildlifemovetools.org/width-calculator ) so users can estimate the width of space between structures in their focal areas. Synthesis and applications . In rural areas, maintaining spaces between houses >500 m will likely facilitate ungulate movement. To fully conserve functional habitat, such as unimpeded habitat use along migration corridors, maintaining spaces approximately >2.5 km between houses will likely be necessary.

Wyoming↗
USGS2010

An analysis of the risk of introduction of additional strains of the rust puccinia psidii Winter ('Ohi'a Rust) to Hawai'i

In April 2005, the rust fungus Puccinia psidii (most widely known as guava rust or eucalyptus rust) was found in Hawai'i. This was the first time this rust had been found outside the Neotropics (broadly-defined, including subtropical Florida, where the rust first established in the 1970s). First detected on a nursery-grown 'ohi'a plant, it became known as ''ohi'a rust'in Hawai'i. The rust spread rapidly and by August 2005 had been found throughout the main Hawaiian Islands. The rust probably reached Hawai'i via the live plant trade or via the foliage trade. In Hawai'i, the rust has infected three native plant species and at least eight non-native species. Effects have been substantial on the endangered endemic plant Eugenia koolauensis and the introduced rose apple, Syzygium jambos. Billions of yellow, asexual urediniospores are produced on rose apple, but a complete life cycle (involving sexual reproduction) has not yet been observed. The rust is autoecious (no alternate host known) on Myrtaceae. The strain introduced into Hawai'i is found sparingly on 'ohi'a (Metrosideros polymorpha), the dominant tree of Hawai'i's forests, with sporadic damage detected to date. The introduction of a rust strain that causes widespread damage to 'ohi'a would be catastrophic for Hawai'i's native biodiversity. Most imports of material potentially contaminated with rust are shipped to Hawai'i from Florida and California (from which P. psidii was reported in late 2005 by Mellano, 2006). Florida is known to have multiple strains. The identity of the strain or strains in California is unclear, but one of them is known to infect myrtle, Myrtus communis, a species commonly imported into Hawai'i. It is important to ecosystem conservation and commercial forestry that additional rust strains or genotypes be prevented from establishing in Hawai'i. The purpose of this analysis of risk is to evaluate the need for an interim rule by the Hawai'i Department of Agriculture to regulate plant material of Myrtaceae arriving from the continental United States and to clarify consequences of such a rule, especially implications for possible eventual action by the U.S. Department of Agriculture, Animal and Plant Health Inspection Service, to assist in protection of Hawai'i's native and non-native Myrtaceae from plant pests.

Open-File Report↗
USGS2002

Threats to desert tortoise populations: a critical review of the literature

Decision in resource management are generally based on a combination of sociopolitical, economic, and environmental factors, and may be biased by personal values. These three components often contradict each other resulting in controversy. Controversies can usually be reduced when solid scientific evidence is used to support or refute a decision. However, it is important to recognize that data often do little to alter antagonists' positions when differences in values are the bases if the dispute. But, supporting data can make the decision more defensible, both legally and ethically, especially if the data supporting all opposing viewpoints are included in the decision-making process. Resource management decisions must be made using the best scientific information currently available. However, scientific data vary in two important measures of quality: reliability and validity. The reliability of the data is a measure of the degree to which the observations or conclusion can be repeated. Validity of the data is a measure of the degree to which the observation or conclusion reflects what actually occurs in nature. How the data are collected strongly affects the reliability of validity of ecological conclusions that can be made. Research data potentially relevant to management come from different sources, and the source often provides clues to the reliability and, to a certain extent, validity of data. Understanding the quality of data being used to make management decisions helps to separate the philosophical or value-based aspects of arguments from the objective ones, thus helping to clarify the decisions and judgments that need to be made. The West Mojave Plan is a multispecies, bioregional plan for the management of natural resources within a 9.4 million-acre area of the Mojave Desert in California. The plan addresses the legal requirements for the recovery of the desert tortoise ( Gopherus agazzizii ), a threatened species, but also covers an additional approximately 80 species of plants and animals assigned special status by the Bureau of Land Management, U. S. Fish and Wildlife Service, and California Department of Fish and Game. Within the planning area, 28 separate jurisdictions (counties, cities, towns, military installations, etc.) seek programmatic prescriptions that will facilitate streamlined environmental review, result in expedited authorization for development projects, and protect listed and unlisted species into the foreseeable future to avoid or minimize conflicts between proposed development and species' conservation and recovery. All of the scientific data available concerning the biology and management of these approximately 80 species and their habitats must be evaluated to develop a scientifically credible plan. This document provides an overview and evaluation of the knowledge of the major threats to the persistence and recovery of desert tortoise populations. I was specifically asked to evaluate the scientific veracity of the data and reports available. I summarize the data presently available with particular focus on the West Mojave Desert, evaluate the scientific integrity of the data. and identify major gaps in the available knowledge. I do not attempt to provide in-depth details on each study or threat; for more details I encourage the reader to consult the individual papers or reports city throughout this report (many of which are available at most university libraries and at the West Mojave Plan office in Riverside, California). I also do not attempt to characterize or evaluate the past or present management actions, except where they have direct bearing on evaluation of threats, nor do I attempt, for the most part, to acquire, generate, or evaluate new or existing, but uninterpreted data.

California↗
USGS2023

Disinfection protocols for herpetofaunal pathogens

The spread of disease-causing pathogens is a major threat to amphibians and reptiles worldwide (Converse and Greene 2005; Picco et al. 2007; Picco and Collins 2008; St-Amour et al. 2008; O’Hanlon et al. 2018; Scheele et al. 2019). The World Organisation for Animal Health’s global list of notifiable animal diseases includes herpetofaunal diseases caused by infection with Ranavirus spp. (RV) and two chytrid fungi, Batrachochytrium dendrobatidis (Bd) and B. salamandrivorans (Bsal; WOAH 2023). Scientists began testing the efficacy of disinfection protocols even before human-assisted transmission of these pathogens was documented (Johnson et al. 2003; Johnson and Speare 2003; Brem et al. 2007; Bryan et al. 2009), and now guidance exists to determine the appropriate biosecurity measures as personal gear moves between habitats, construction equipment moves between project areas, and investigators handle multiple animals within a population (Phillot et al. 2010; Gray et al. 2017, 2018; Julian et al. 2020; Olson et al. 2021). People who are engaged in educational, recreational, commercial, or professional activities in wetlands and aquatic habitats play an important role in helping prevent the spread of pathogens and should know how and when to employ appropriate disinfecting procedures. In particular, working groups and regional chapters of Partners in Amphibian and Reptile Conservation (PARC) have developed a variety of educational materials on biosecurity and disinfection for a wide audience (e.g., PARC 2023). Herein, we provide the instructions for the disinfection of field equipment that were recently revised by the Emerging Disease Working Group of Northeast PARC (NEPARC 2022). The impetus for revision was to inform field personnel of the use of a stronger bleach concentration (ca. 10× stronger) that is needed for effectiveness against Bsal (Van Rooij et al. 2017). This is important for regions where Bsal is currently known to occur (e.g., central Europe) as well as regions where it is presumed absent but could arrive at any time (e.g., North America)

Herpetological Review↗
USGS2025

Automated methods for processing camera trap video data for distance sampling

Context Population monitoring is an essential need for tracking biodiversity and judging efficacy of conservation management actions, both globally and in the Pacific. However, population monitoring efforts are often temporally inconsistent and limited to small scales. Motion-activated cameras (‘camera traps’) offer a way to cost-effectively monitor populations, but they also generate large amounts of data that are time intensive to process. Aims To develop an automated pipeline for processing videos of ungulates (Philippine deer, Rusa marianna ; and pigs, Sus scrofa ) on Andersen Air Force Base in Guam. Methods We processed camera videos with a machine learning model for object detection and classification. To estimate density using distance sampling methods, we used a separate machine learning model to estimate the distance of target animals from the camera. We compared density estimates generated using manual versus automated methods and assessed accuracy and processing time saved. Key results The object detection and classification model achieved an overall accuracy >80% and F1 score ≥0.9 and saved 36.9 h of processing time. The automated distance estimation was fairly accurate, with a 1.1 m (±1.4 m) difference from manual distance estimates, and saved 16.8 h of processing time. Density estimates did not differ substantially between manual and automated distance estimation. Conclusions Machine learning models accurately processed camera videos, allowing efficient estimates of density from camera data. Implications Further adoption of motion-activated cameras coupled with automated processing could lead to continuous, large-scale monitoring of populations, helping to understand and address changes in biodiversity.

Guam↗
USGS2016

Cryptic invasion of Northern Leopard Frogs ( Rana pipiens ) across phylogeographic boundaries and a dilemma for conservation of a declining amphibian

Anthropogenic introduction of species is a major contributor to loss of biodiversity. Translocations within the range of a species are less frequently recognized, but have the potential for negative effects as well. Genetic mixing may lead to loss of local adaptations or further decline through outbreeding depression. These cryptic invasions may be quite difficult to recognize, but genetic tools can be used to recognize and monitor such intraspecific introductions. Conversely, translocations within species can be an important conservation tool to reduce inbreeding depression and replace lost genetic diversity. Thus, cryptic invasions can be either an aid or a hindrance to conservation efforts. We tested for the presence of non-native genotypes and assessed the extent and nature of introgression in populations of Northern Leopard Frog ( Rana pipiens ) in the southwestern US, where populations have declined to a few remnant populations. The most abundant and diverse complex of populations in the region contained a mitochondrial haplotype that was not native to the western US, probably resulting from the introduction of released pets, laboratory animals, or release during fish stocking. These non-native haplotypes were well integrated into a large complex of ponds and lakes, contributing to high genetic diversity in this area. Logistically, the geographic extent of non-native genetic influence within this population precludes eliminating or controlling the non-native component of this population. We recommend assessing the progress and fate of the introgression over time—along with population fitness parameters—to determine whether this introduction is beneficial or detrimental to population persistence. Meanwhile, translocations from nearby locations with similar environmental conditions have the best prospects for avoiding problems with outbreeding depression in other declining populations and will also most effectively preserve regional genetic diversity.

Biological Invasions↗
USGS2023

Survival, healing, and swim performance of juvenile migratory sea lamprey (Petromyzon marinus) implanted with a new acoustic microtransmitter designed for small eel-like fishes

Background Little is known about the transformer stage of the parasitic lampreys, a brief but critical period that encompasses juvenile out-migration from rivers to lakes or oceans to begin parasitic feeding. Information about this life stage could have significant conservation implications for both imperiled and invasive lampreys. We investigated tag retention, survival, wound healing, and swim performance of newly transformed sea lamprey ( Petromyzon marinus ) implanted with a new micro-acoustic transmitter, the eel–lamprey acoustic transmitter (ELAT), in a controlled laboratory environment. Results The 61-day survival of our tagged subjects was 71%, within the range reported in similar studies of juvenile lampreys. However, survival was significantly lower in the tagged animals (vs control), with no effect statistically attributable to measures of animal length, mass, condition, or population of origin (Great Lakes vs. Atlantic drainage). Mortality in tagged fish was concentrated in the first four days post-surgery, suggesting injury from the surgical process. An unusually long recovery time from anesthesia may have contributed to the increased mortality. In a simple burst swim assay, tagged animals swam significantly slower (− 22.5%) than untagged animals, but were not significantly different in endurance swim tests. A composite wound healing score at day four was a significant predictor of maximum burst swim speed at day 20, and wound condition was related to animal mass, but not length, at the time of tagging. Conclusions Impairments to survival and swim performance of juvenile sea lamprey implanted with the ELAT transmitter were within currently reported ranges for telemetry studies with small, difficult to observe fishes. Our results could be improved with more refined anesthesia and surgical techniques. The ability to track migratory movements of imperiled and pest populations of parasitic lampreys will improve our ability to estimate vital rates that underlie recruitment to the adult population (growth, survival) and to investigate the environmental factors that regulate the timing and rates of movement, in wild populations.

Atlantic Ocean, Connecticut River, Laurentian Grea↗
USGS2023

Integrated science strategy for assessing and monitoring water availability and migratory birds for terminal lakes across the Great Basin, United States

Executive Summary In 2022, the U.S. Geological Survey (USGS) established the Saline Lake Ecosystems Integrated Water Availability Assessment (IWAAs) to monitor and assess the hydrology of terminal lakes in the Great Basin and the migratory birds and other wildlife dependent on those habitats. Scientists from across the USGS (with specialties in water quantity, water quality, limnology, avian biology, data science, landscape ecology, and science communication) formed the Saline Lake Ecosystems IWAAs Team. The team has developed this regional strategic science plan to guide data collection and assessment activities at terminal lakes in the Great Basin. The U.S. Congress requested the USGS to establish the Saline Lake Ecosystems IWAAs in response to historically low water levels at terminal lakes and associated wetlands across the Great Basin. Not all Great Basin terminal lakes have high salinity; however, all terminal lakes occur in endorheic, closed, basins with no surface-water outflow. Low lake levels across the Great Basin are the result of increased water use for agriculture and municipalities, drought conditions, and a warming climate. Great Basin terminal lake water extents have decreased by as much as 90 percent over the last 150 years, and terminal lake wetlands have decreased in area by as much as 47 percent since 1984. Lake elevations and wetland areas are primarily supported by freshwater inputs from snowmelt feeding upgradient rivers, streams, and springs. These freshwater inputs have been severely reduced because of continued and increased surface-water diversions and surface-water capture through groundwater pumping for agriculture, mining, and public supply as well as unprecedented drought conditions and warming temperatures related to climate change. Water quality, specifically salinity, is highly variable for terminal lakes of the Great Basin, and this variability is a result of the balance between freshwater inflow and evaporation. Variability of salinity at each of the terminal lakes can be affected by lake morphology, hydrogeologic features of the basin, annual variability in weather patterns, and changes in upgradient water use. Hypersaline terminal lakes provide abundant food resources such as brine shrimp and brine flies that support nesting and migrating birds. The density and composition of invertebrates are closely tied to lake salinity. Increased salinity can exceed the tolerance of invertebrates, severely limiting their biomass. In contrast, decreased salinity can lead to altered invertebrate community composition, reducing the abundance of optimal avian prey resources. Great Basin terminal lake ecosystems, including open-water and adjacent aquatic and terrestrial environments, provide resources necessary to sustain many animal populations throughout the year. Although a variety of taxa use terminal lakes, these ecosystems are of acute importance for the millions of migratory waterbirds (for example, shorebirds, wading birds, and waterfowl) dependent on the network of terminal lakes and their associated wetlands. Migratory birds transiting the Pacific and Central Flyways use Great Basin terminal lake ecosystems throughout the year to feed, nest, and transit between wintering and breeding ranges. As such, successful conservation of birds and their habitats requires coordinated management of water and habitats across the Great Basin network of terminal lakes and wetlands. The linkages between water availability and ecosystem vulnerability of terminal lakes in the Great Basin are not well understood. The vulnerability of terminal lakes is related to the factors driving change and adaptive capacity of the lake ecosystem. Saline lake ecosystems are vulnerable when changes in water quantity affect ecosystem function. Water quantity affects salinity, which affects food webs and habitat; these linkages can be investigated with water-quality and food web monitoring. Water quantity also affects inundated habitat, which can be quantified through remote sensing. It is necessary to quantify hydroclimatic and water use controls on water availability to terminal lakes to assess the response of the ecosystems. Remotely sensed data can provide a broad-scale and long-term synoptic view of terminal lake hydrologic characteristics, but ground observations are required to interpret changes in water quality and ecological functions. Some terminal lake basins have ongoing monitoring and modeling efforts within the Great Basin (for example, Great Salt Lake, Carson River Basin), yet most monitoring locations are hydrologically upgradient and too far away from lake inflows to provide an accurate assessment of hydrological trends for the lake ecosystems. Other terminal lakes have no long-term hydrological monitoring in their respective watersheds (for example, Lake Abert). Ecological data collection in the Great Basin is also insufficient to understand how many birds exist on the landscape, how birds use the mosaic of terminal-lake habitats as an interconnected system, and how Great Basin terminal lakes are linked to the larger continental system of the Pacific and Central Flyways. Across agencies and organizations, tracking bird movement, abundance, and diversity is inconsistent, with some lakes having once- or twice-a-year bird survey efforts and a few locations having more intensive ecological data-gathering efforts (for example, Great Salt Lake, Lake Abert). Bridging hydrological and ecological information gaps will improve understanding of the trends in water supply and water quality, habitat availability and usage, and impacts on vulnerable waterbird species, all of which would be used by managers in coordinated conservation of this unique network of terminal-lake habitats. The terminal lakes of the Great Basin are part of the Basin and Range physiographic province that extends from the Colorado Plateau on the east to the Sierra Nevada on the west, and from the Snake River Plain on the north to the Garlock fault and the Mojave block on the south. The Great Basin is larger than 650,000 square kilometers and encompasses most of the State of Nevada but also extends to western Utah, eastern California, southeastern Idaho, southwestern Wyoming, and southeastern Oregon. The climate is arid to semiarid with a hydrologic regime that is snowmelt dominated, providing as much as 75 percent of total annual runoff for the region. Terminal lakes of the Great Basin occupy the lowest areas of closed (endorheic) drainage basins, such that lake levels and water quality respond rapidly to surface-water inflow. Terminal lakes provide local and regional economic value to the States in the Great Basin, including mineral extraction, aquaculture, public works, and recreational uses. As an example, assessments of Great Salt Lake’s ecological health and economic impact find hemispheric importance for the former and regional importance for the latter. Great Salt Lake creates about 7,000 jobs and $2 billion of economic output per year, most of which would be lost with further declines in lake level. The objectives of this Science Strategy are threefold: (1) to identify how changing water availability affects the quality, diversity, and abundance of habitats supporting continental waterbird populations; (2) to highlight the scientific monitoring and assessment needs of Great Basin terminal lakes; and (3) to support coordinated management and conservation actions to benefit those ecosystems, migratory birds, and other wildlife. There are long-term hydrological, ecological, and societal challenges associated with terminal lakes ecosystems in the Great Basin. This Science Strategy benefits partners by providing a conceptual model, nested at different spatial extents, that identifies key scientific information needs to inform coordinated implementation of management and conservation plans within and among hydrologic basins to address these complex challenges.

California, Idaho, Nevada, Oregon, Utah, Wyoming↗
USGS2017

Divergent migration within lake sturgeon (Acipenser fulvescens) populations: Multiple distinct patterns exist across an unrestricted migration corridor

Population structure, distribution, abundance, and dispersal arguably underpin the entire field of animal ecology, with consequences for regional species persistence, and provision of ecosystem services. Divergent migration behaviours among individuals or among populations is an important aspect of the ecology of highly-mobile animals, allowing populations to exploit spatially- or temporally-distributed food and space resources. This study investigated the spatial ecology of lake sturgeon ( Acipenser fulvescens ) within the barrier free Huron-Erie Corridor (HEC), which connects Lake Huron and Lake Erie of the North American Laurentian Great Lakes. Over six years (2011 – 2016), movements of 268 lake sturgeon in the HEC were continuously monitored across the Great Lakes using acoustic telemetry (10 yr battery life acoustic transmitters). Five distinct migration behaviours were identified with hierarchical cluster analysis, based on the phenology and duration of river and lake use. Lake sturgeon in the HEC were found to contain a high level of intraspecific divergent migration, including partial migration with the existence of residents. Specific behaviours included year-round river residency and multiple lake-migrant behaviours that involved movements between lakes and rivers. Over 85% of individuals were assign to migration behaviours as movements were consistently repeated over the study, which suggested migration behaviours were consistent and persistent in lake sturgeon. Differential use of specific rivers or lakes by acoustic-tagged lake sturgeon further subdivided individuals into 14 “contingents” (spatiotemporally segregated subgroups). Contingents associated with one river (Detroit or St. Clair) were rarely detected in the other river, which confirmed that lake sturgeon in the Detroit and St. Clair represent two semi-independent populations that could require separate management consideration for their conservation. The distribution of migration behaviours did not vary between populations, sexes, body size, or among release locations, which indicated that intrapopulation variability in migratory behaviour is a general feature of the spatial ecology of lake sturgeon in un-fragmented landscapes.

Michigan, Ontario↗
USGS2009

The reintroduction of the Andean condor into Colombia, South America: 1989-1991

From 1989 to 1991,22 captive-reared Andean condors Vultur gryphus were released into three protected areas in the Andes of Colombia, South America. The goals of this reintroduction programme were to re-establish populations of these birds in protected habitat where the species had been extirpated, and to train local biologists in the conservation techniques necessary to recover their native condor. All birds were hatched, reared and released according to the protocols established by the US Fish and Wildlife Service and the California Department of Fish and Game for the California condor Gymnogyps californianus. At the time of release, the birds ranged in age from 11 to 26 months. Each bird was fitted with individually numbered wing tags and wing-mounted radio transmitters. Of the 22 released animals, 19 currently survive – a substantial increase to the wild population in Colombia, which had been estimated by Colombian biologists to number only 20 individuals.

Oryx↗
USGS2019

Reserve design to optimize functional connectivity and animal density

Ecological distance-based spatial capture–recapture models (SCR) are a promising approach for simultaneously estimating animal density and connectivity, both of which affect spatial population processes and ultimately species persistence. We explored how SCR models can be integrated into reserve-design frameworks that explicitly acknowledge both the spatial distribution of individuals and their space use resulting from landscape structure. We formulated the design of wildlife reserves as a budget-constrained optimization problem and conducted a simulation to explore 3 different SCR-informed optimization objectives that prioritized different conservation goals by maximizing the number of protected individuals, reserve connectivity, and density-weighted connectivity. We also studied the effect on our 3 objectives of enforcing that the space-use requirements of individuals be met by the reserve for individuals to be considered conserved (referred to as home-range constraints). Maximizing local population density resulted in fragmented reserves that would likely not aid long-term population persistence, and maximizing the connectivity objective yielded reserves that protected the fewest individuals. However, maximizing density-weighted connectivity or preemptively imposing home-range constraints on reserve design yielded reserves of largely spatially compact sets of parcels covering high-density areas in the landscape with high functional connectivity between them. Our results quantify the extent to which reserve design is constrained by individual home-range requirements and highlight that accounting for individual space use in the objective and constraints can help in the design of reserves that balance abundance and connectivity in a biologically relevant manner.

Conservation Biology↗