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USGS2004

Los Angeles and San Diego Margin High-Resolution Multibeam Bathymetry and Backscatter Data

Summary -- The U.S. Geological Survey in cooperation with the University of New Hampshire and the University of New Brunswick mapped the nearshore regions off Los Angeles and San Diego, California using multibeam echosounders. Multibeam bathymetry and co-registered, corrected acoustic backscatter were collected in water depths ranging from about 3 to 900 m offshore Los Angeles and in water depths ranging from about 17 to 1230 m offshore San Diego. Continuous, 16-m spatial resolution, GIS ready format data of the entire Los Angeles Margin and San Diego Margin are available online as separate USGS Open-File Reports. For ongoing research, the USGS has processed sub-regions within these datasets at finer resolutions. The resolution of each sub-region was determined by the density of soundings within the region. This Open-File Report contains the finer resolution multibeam bathymetry and acoustic backscatter data that the USGS, Western Region, Coastal and Marine Geology Team has processed into GIS ready formats as of April 2004. The data are available in ArcInfo GRID and XYZ formats. See the Los Angeles or San Diego maps for the sub-region locations. These datasets in their present form were not originally intended for publication. The bathymetry and backscatter have data-collection and processing artifacts. These data are being made public to fulfill a Freedom of Information Act request. Care must be taken not to confuse artifacts with real seafloor morphology and acoustic backscatter.

Open-File Report↗

USGS2007

Water velocity and suspended solids measurements by in-situ instruments in Upper Klamath Lake, Oregon

The U. S. Geological Survey conducted hydrodynamic measurements in Upper Klamath Lake during four summer seasons (approximately mid-June to mid-September) during 2003 to 2006. Measurements included water current profiles made by acoustic Doppler current profilers at a number of fixed locations in the lake during all four years as well as from a moving boat during 2005 and 2006. Measurements of size distribution of suspended material were made at four locations in the lake during 2004-2006. Raw (unfiltered) data are presented as time series of measurements. In addition, water-velocity data have been filtered to remove wind-induced variations with periods less than thirty hours from the measurements. Bar graphs of horizontal and vertical water speed and acoustic backscatter have been generated to discern diurnal variations, especially as they relate to wind patterns over the lake. Mean speeds of the horizontal currents in the lake range between about 3.5 to 15 cm/s with the higher speeds at the deep locations in the trench on the west side of the lake. Current directions generally conform to the lake’s bathymetry contours and the water circulation pattern is usually in a clockwise direction around the lake as established by the prevailing north to northwesterly surface winds in the region. Diurnal patterns in horizontal currents probably relate to diurnal wind patterns with minimum wind speeds near noon and maximum wind speeds near 2100. Diurnal variations in vertical velocities do not appear to be related to wind patterns; they do appear to be related to expected patterns of vertical migration of Aphanizomenon flos aquae , (AFA) the predominant species of blue-green algae in the lake. Similarly, diurnal variations in acoustic backscatter, especially near the lake’s surface, are probably related to the vertical migration of AFA.

Oregon↗

USGS2007

Bathymetry, substrate and circulation in Westcott Bay, San Juan Islands, Washington

Nearshore bathymetry, substrate type, and circulation patterns in Westcott Bay, San Juan Islands, Washington, were mapped using two acoustic sonar systems, video and direct sampling of seafloor sediments. The goal of the project was to characterize nearshore habitat and conditions influencing eelgrass ( Z. marina ) where extensive loss has occurred since 1995. A principal hypothesis for the loss of eelgrass is a recent decrease in light availability for eelgrass growth due to increase in turbidity associated with either an increase in fine sedimentation or biological productivity within the bay. To explore sources for this fine sediment and turbidity, a dual-frequency Biosonics sonar operating at 200 and 430 kHz was used to map seafloor depth, morphology and vegetation along 69 linear kilometers of the bay. The higher frequency 430 kHz system also provided information on particulate concentrations in the water column. A boat-mounted 600 kHz RDI Acoustic Doppler Current Profiler (ADCP) was used to map current velocity and direction and water column backscatter intensity along another 29 km, with select measurements made to characterize variations in circulation with tides. An underwater video camera was deployed to ground-truth acoustic data. Seventy one sediment samples were collected to quantify sediment grain size distributions across Westcott Bay. Sediment samples were analyzed for grain size at the Western Coastal and Marine Geology Team sediment laboratory in Menlo Park, Calif. These data reveal that the seafloor near the entrance to Westcott Bay is rocky with a complex morphology and covered with dense and diverse benthic vegetation. Current velocities were also measured to be highest at the entrance and along a deep channel extending 1 km into the bay. The substrate is increasingly comprised of finer sediments with distance into Westcott Bay where current velocities are lower. This report describes the data collected and preliminary findings of USGS Cruise B-6-07-PS conducted between May 31, 2007 and June 5, 2007.

Washington↗

USGS2010

Continuous tidal streamflow, water level, and specific conductance data for Union Creek and the Little Back, Middle, and Front Rivers, Savannah River Estuary, November 2008 to March 2009

In the Water Resource Development Act of 1999, the U.S. Congress authorized the deepening of the Savannah Harbor. Additional studies were then identified by the Georgia Ports Authority and other local and regional stakeholders to determine and fully describe the potential environmental effects of deepening the channel. One need that was identified was the validation of a three-dimensional hydrodynamic model developed to evaluate mitigation scenarios for a potential harbor deepening and the effects on the Savannah River estuary. The streamflow in the estuary is very complex due to reversing tidal flows, interconnections of streams and tidal creeks, and the daily flooding and draining of the marshes. The model was calibrated using very limited streamflow data and no continuous streamflow measurements. To better characterize the streamflow dynamics and mass transport of the estuary, two index-velocity sites were instrumented with continuous acoustic velocity, water level, and specific conductance sensors on the Little Back and Middle Rivers for the 5-month period of November 2008 through March 2009. During the same period, a third acoustic velocity meter was installed on the Front River just downstream from U.S. Geological Survey streamgaging station 02198920 (Savannah River at GA 25, at Port Wentworth, Georgia) where water level and specific conductance data were being collected. A fourth index-velocity site was instrumented with continuous acoustic velocity, water level, and specific conductance sensors on Union Creek for a 2-month period starting in November 2008. In addition to monitoring the tidal cycles, streamflow measurements were made at the four index-velocity sites to develop ratings to compute continuous discharge for each site. The maximum flood (incoming) and ebb (outgoing) tides measured on Little Back River were –4,570 and 7,990 cubic feet per second, respectively. On Middle River, the maximum flood and ebb tides measured were –9,630 and 13,600 cubic feet per second, respectively. On Front River, the maximum flood and ebb tides were –34,500 and 43,700 cubic feet per second, respectively; and on Union Creek, the maximum flood and ebb tides were –2,390 and 4,610 cubic feet per second, respectively. During the 5-month instrumentation deployment, computed tidal streamflows on Little Back River ranged from –7,820 to 9,600 cubic feet per second for the flood and ebb tides, respectively. On Middle River, the computed tidal streamflows ranged from –17,500 to 22,500 cubic feet per second for the flood and ebb tides, respectively. The computed tidal streamflows on Front River ranged from –78,900 to 87,200 cubic feet per second, and from –3,850 to 6,130 cubic feet per second on Union Creek for the flood and ebb tides, respectively. The streamgages on the Little Back, Middle, and Front Rivers have continued in operation following the initial 5-month deployment.

Georgia, South Carolina↗

USGS2012

A standard operating procedure for the surgical implantation of transmitters in juvenile salmonids

Biotelemetry is a useful tool to monitor the movements of animals and is widely applied in fisheries research. Radio or acoustic technology can be used, depending on the study design and the environmental conditions in the study area. A broad definition of telemetry also includes the use of Passive Integrated Transponder (PIT) tags, either separately or with a radio or acoustic transmitter. To use telemetry, fish must be equipped with a transmitter. Although there are several attachment procedures available, surgical implantation of transmitters in the abdominal cavity is recognized as the best technique for long-term telemetry studies in general (Stasko and Pincock, 1977; Winter, 1996; Jepsen, 2003), and specifically for juvenile salmonids, Oncorhynchus spp. (Adams and others, 1998a, 1998b; Martinelli and others, 1998; Hall and others, 2009). Studies that use telemetry assume that the processes by which the animals are captured, handled, and tagged, as well as the act of carrying the transmitter, will have minimal effect on their behavior and performance. This assumption, commonly stated as a lack of transmitter effects, must be valid if telemetry studies are to describe accurately the movements and behavior of an entire population of interest, rather than the subset of that population that carries transmitters. This document describes a standard operating procedure (SOP) for surgical implantation of radio or acoustic transmitters in juvenile salmonids. The procedures were developed from a broad base of published information, laboratory experiments, and practical experience in tagging thousands of fish for numerous studies of juvenile salmon movements near Columbia River and Snake River hydroelectric dams. Staff from the Western Fisheries Research Center's Columbia River Research Laboratory (CRRL) frequently have used telemetry studies to evaluate new structures or operations at hydroelectric dams in the Columbia River Basin, and these evaluations typically require large numbers of tagged fish. For example, a study conducted at the dams on the Columbia River and funded by the U.S. Army Corps of Engineers required tagging and monitoring of 40,000 juvenile salmon during a 3-month migration period (Counihan and others, 2006a, 2006b; Perry and others, 2006). To meet the demands of such a large study, the authors and CRRL staff refined the SOP to increase efficiency in the tagging process while maintaining high standards of fish care. The SOP has been used in laboratory and field settings for more than 15 years, and consistently has produced low mortality rates (<1 percent) and transmitter loss rates (<0.01 percent) in the 24-36 hours after tagging. In addition to describing the detailed surgical procedures required for transmitter implantation, this document provides guidance on fish collection, handling and holding, and the release of tagged fish. Although often overlooked, or at least underemphasized, these processes can have a large impact on the outcome of the tagging procedure. Stress associated with the individual steps in handling and tagging can be cumulative and lethal (Maule and others, 1988; Wedemeyer and others, 1990; Portz and others, 2006), so the goal is to provide the best possible fish care at every step in order to manage the overall effect on study fish.

Open-File Report↗

USGS2014

Drilling and geophysical logs of the tophole at an oil-and-gas well site, Central Venango County, Pennsylvania

In a study conducted by the U.S. Geological Survey, in cooperation with the Pennsylvania Department of Conservation and Natural Resources, Bureau of Topographic and Geologic Survey, drilling and geophysical logs were used to characterize the geohydrologic framework and the freshwater and saline-water zones penetrated by the tophole at an oil-and-gas well site in central Venango County, Pennsylvania. The geohydrologic setting of the well site is typical of the dissected Appalachian Plateau underlain by Pennsylvanian and Mississippian sandstone and shale. The drilling, gamma, and acoustic-televiewer logs collected from the 575-foot deep tophole define the penetrated Pennsylvanian and Mississippian stratigraphic units and their lithology. The caliper, video, and acoustic-televiewer logs delineate multiple bedding-related and high-angle fractures in the lower Pottsville Group and Shenango Formation from 22 to 249 feet below land surface. The caliper and acoustic-televiewer logs indicate a sparsity of fractures below 249 feet below land surface in the lowermost Shenango Formation, Cuyahoga Group, Corry Sandstone, “Drake Well” formation, and upper Riceville Formation. About half of the blown yield during drilling of the tophole was from fractures in the upper Shenango Formation between 80 and 167 feet below land surface and the other half from fractures in the lower Shenango between 190 and 249 feet below land surface. Following drilling, fractures above the water level at about 145 feet below land surface produced freshwater with a specific conductance of less than 150 microsiemens per centimeter at 25 degrees Celsius that cascaded down the hole. As indicated by the fluid resistivity and temperature logs, most of the downflow exited the hole at the water-bearing fractures at 249 feet below land surface. The downward flow in the tophole reflects the downward hydraulic gradient between the water-bearing fractures above the water level and those at 249 feet below land surface. Low conductivity and high resistivity values on the dual induction logs indicate freshwater above 285 feet below land surface in the Shenango sandstones, which is consistent with a specific conductance of blown yield of 400 microsiemens per centimeter at 25 degrees Celsius at 200 feet below land surface. High conductivity and low resistivity values on the induction logs indicate the presence of saline water below 450 feet in the Corry Sandstone. The highest specific conductance of the blown yield, 1,200 microsiemens per centimeter at 25 degrees Celsius, was measured at 480 feet below land surface following penetration of the Corry Sandstone. Collection and integrated analysis of drilling and geophysical logs provided an efficient and effective means for characterizing the geohydrologic framework and conditions penetrated by the tophole at the selected oil-and-gas well site. The logging methods and lessons learned at this well site could be applied at other oil-and-gas drilling sites to better characterize the shallow subsurface with the overall goal of protecting freshwater aquifers during hydrocarbon development.

Pennsylvania↗

USGS2016

Evaluation of the biological and hydraulic performance of the portable floating fish collector at Cougar Reservoir and Dam, Oregon, September 2015–January 2016

The biological and hydraulic performance of a portable floating fish collector (PFFC) located in the cul-de-sac of Cougar Dam and Reservoir, Oregon, was evaluated during 2015–16. The PFFC, first commissioned in May 2014, was modified during winter 2014–15 to address several deficiencies identified during operation and testing in 2014. These modifications included raising the water inflow structures to reduce the depth and volume of inflow to improve the internal hydraulic profiles, and moving the anchors so the PFFC could be positioned closer to the existing reservoir outlet, a water temperature control tower. The PFFC was positioned about 18 meters (m) upstream of the intake of the water temperature control tower and faced into the prevailing water current. Like several floating surface collectors operating in the Pacific Northwest at the time, the PFFC used pumps to draw water and fish over an inclined plane, past dewatering screens, and into a collection area. The portable and experimental nature of the PFFC required a smaller size, shallower entrance (about 2.5-m deep), and smaller inflow rate (72 cubic feet per second [ft 3 /s] inflow during the Low treatment, 122 ft 3 /s during the High treatment) than other collectors in the region. The collection of the target species, juvenile Chinook salmon ( Oncorhynchus tshawytscha ) , during 2015–16 was an order of magnitude larger than in 2014. Subyearling-age Chinook salmon comprised most of the catch (2,616 subyearling compared to 258 yearling) and was greatest during the spring during the High inflow treatment. Bycatch consisted predominantly of cyprinids and centrarchids. Trap mortality (fish found dead in the trap) of juvenile Chinook salmon, at 9.2 percent of the subyearlings and 5.0 percent of yearlings, was about 30 percent of the level in 2014. Fish mortality from handling the live catch was about 1 percent. Data from fish tagged with passive integrated transponder (PIT) tags and those with acoustic+PIT tags released near the head of the reservoir indicated the catch rates of the PFFC were low. Eight of the 1,497 PIT-tagged fish and 5 of the 534 acoustic+PIT-tagged fish were collected by the PFFC. Fish collection efficiencies—the number collected by the PFFC out of the number detected at the head of the forebay (FCE FB ) or in the cul-de-sac (FCE CDS ) —were 0.002 and 0.003 during the Low treatment and 0.008 and 0.009 during the High treatment. The low FCEs were attributed to the following factors: Few acoustic+PIT-tagged fish were detected within 10 m of the PFFC entrance, Most fish were detected between the stern of the PFFC and the entrance to the tower, Fish depths commonly were several times greater than the PFFC entrance depth, and Surface water temperatures were warm. The data suggest that the shallow entrance and low inflow rate reduced fish guidance near the PFFC entrance and the hydraulic characteristics resulting from the outflow plumes (and perhaps water entering the temperature control tower) attracted fish to that area. Catch of juvenile Chinook salmon likely would increase if the collector entrance were deepened, the inflow rate were increased, and measures were taken to constrain fish presence to the area upstream of the trap entrance.

Oregon↗

USGS2018

Effects of transmitter type, tagging method, body size, and temperature on behavior, physiology, and swimming performance of juvenile Chinook salmon (Oncorhynchus tshawytscha)

The objective of this study was to assess the impact of different tagging methods and transmitter types on juvenile salmonid behavior, mortality, physiology, and swimming performance over a range of water temperatures and fish sizes. In Chapter 1, two laboratory experiments were conducted to assess maximum burst-swimming speeds, the probability of gulping air, swimming angles, and the probability of resting on a screen in a swim tunnel. For the burst swim speed experiment, we identified a slightly reduced, but statistically significant difference in burst-swimming speeds for gastric- and surgical-tagged fish implanted with dummy radio and acoustic transmitters. For the swim tunnel experiment, surgical-tagged fish were one-half as likely to gulp air at the surface of the swim tunnel as untagged and gastric-tagged fish. We observed higher probabilities of fish gulping air at the surface for fish with tag ratios greater than 5 percent, suggesting that smaller fish required greater adjustment to their buoyancy than larger fish. We also observed that gastric-tagged fish had, on average, steeper swimming angles than untagged and surgical-tagged fish in the swim tunnel. In Chapter 2, we conducted a field-based laboratory experiment at John Day Dam to assess the sustained swimming performance (i.e., critical swimming speed or U crit ) of in-river migrating subyearling Chinook salmon that were surgically implanted with dummy radio and acoustic transmitters. Statistical tests indicated a significant reduction (about 8.3 centimeters per second [cm/s] or 1 body length per second) in sustained swimming performance for fish implanted with either radio or acoustic transmitters. We also found a significant reduction in U crit of -1.38 cm/s for every 1 degree Celsius (°C) increase in temperature. In Chapter 3, we assessed the effects of water temperature on the physiology, mortality, and swimming performance of juvenile Chinook salmon in laboratory and field experiments. Juvenile Chinook salmon generally showed elevated stress response, elevated mortality, and reduced swimming performance as water temperature increased. We concluded that the water temperature threshold for handling and tagging fish with minimal impacts seems to be near 23 °C. At 25 °C, we documented very high mortality and dramatically reduced swimming performance of tagged fish relative to controls. Telemetry studies conducted at 25 °C would not meet the critical assumption that the transmitter has minimal impacts on the study fish. In the Chapter 4, we evaluated the effects of antenna length and antenna material on the subsequent tag output power, reception, and detection of tagged fish. In a laboratory, we compared the relative signal strengths in water of 150-megahertz transmitters over a range of antenna lengths (from 6 to 30 cm) and materials (one weighing about one-half of the other). The peak relative signal strengths were at 20 and 22 cm, which are about 1 wavelength underwater at the test frequency. The peak relative signal strengths at these antenna lengths were about 50 percent greater than those of 30-cm antennas, a length commonly used in fisheries research.

Open-File Report↗

USGS2024

Adult green sturgeon (Acipenser medirostris) movements in the Sacramento–San Joaquin River Delta, California, December 2020–January 2023

The U.S. Army Corps of Engineers American River Watershed Common Features project (ACRF) seeks to reduce flood risk for the City of Sacramento, California, and surrounding areas. The project includes levee-remediation measures to address seepage, stability, erosion, and height concerns as well as the widening of the Sacramento Weir and Bypass. The project reach is in the lower extent of the Sacramento River migration corridor for the federally threatened southern Distinct Population Segment of North American green sturgeon ( Acipenser medirostris ). To establish baseline migratory behavior, we examined adult green sturgeon transit through the project area prior to construction. Biologists from the U.S. Army Corps of Engineers collected and tagged 55 adult green sturgeon with acoustic and passive integrated transponders, near Hamilton City, California, at river kilometer 332 of the Sacramento River each fall from 2020 to 2022. To evaluate fish movements, we deployed five acoustic detection sites at river kilometers 101, 90, 76, and 21 on the Sacramento River and in Tule Canal near the Sacramento Bypass at river kilometer 101 of the Sacramento River. The acoustic receivers detected nearly all tagged fish moving downstream through the ARCF study area during the same water year (October 1–September 30) in which they were tagged. Three fish released in October of 2020 arrived at the ARCF study area more than 362 days later in October 2021. The timing of tagged fish movements was associated with increases in river flow and not hour of day. Adult green sturgeon moved downstream from January to August when streamflows exceeded 15,000 cubic feet per second. During water year 2023 and the critically dry water year 2022, fish moved with the first peaks in flow occurring from mid-October to early January. Fish tagged in the critically dry water year 2021 entered the ARCF study area over an extended period from January to October, when flows remained around 10,000 cubic feet per second all year. Fish moved quickly between sites within the ARCF study area and generally spent less than 1 hour at each detection site.

California↗

USGS1985

Geophysical well log data for study of water flow in fractures near Mirror Lake, West Thornton, New Hampshire

Four closely spaced boreholes were drilled through approximately 20 meters of till into schist bedrock near Mirror Lake, West Thornton, New Hampshire. The site was selected for borehole geophysical research because it is included in a detailed groundwater study where the effects of flow in fractures on flow in overlying drift deposits is being studied. Three of the boreholes are approximately 100 meters in depth, and the fourth is approximately 230 meters in depth. All four boreholes were logged with caliper, acoustic, gamma, single-point-resistivity, and acoustic televiewer logs. Fracture sets dipping approximately 45 degrees to the east were detected in all four boreholes. Two sets of deeper fractures were detected near the bottom of the deepest borehole. Acoustic waveform logs were obtained in all boreholes using three different source frequencies, 34, 15, and 5 kilohertz, for future comparison with surface to borehole seismic data.

New Hampshire↗

USGS1997

Geophysical database of the east coast of the United States; southern Atlantic margin, stratigraphy and velocity in map grids

In 1990, the Naval Oceanographic Office and the U.S. Geological Survey agreed to develop a digital data base of stratigraphy and acoustic properties of sediments along the U.S. East Coast of the United States. The objective of this work was to utilize more than 25,000 km of publicly available multichannel seismic-reflection profiles (Sheridan et al., 1988) in order to assign acoustic properties to the continental margin postrift sediments in an internally consistent, geologically meaningful, regionally extensive, digital form. The acoustic properties of interest include thickness, depth, compressional- and shear-wave velocity, compressional- and shear-wave attenuation, density, and lithology. This data base subdivides the 0- to 14-km thick Jurassic and younger postrift deposits into 18 mappable horizons. The spatial scale of gridding is 5' latitude by 5 ' longitude, or about 9x8 km. This report describes the second part of developing the data base for the continental margin between Florida and Cape Hatteras: spatial gridding of the digital stratigraphic and velocity data, derivative calculations of density, shear-wave velocity, and attenuation, and construction of the final data base. The first report (Hutchinson et al., 1995) describes how the stratigraphy and velocity were digitized from the original profiles. Complementary reports that describe the data base for the area between Cape Hatteras and Georges Bank are given in Klitgord and Schneider (1994) and Klitgord et al. (1994).

Open-File Report↗

USGS2012

Methods for noninvasive bathymetric and velocity surveys for impoundment safety--A case study of Herrington Lake at Dix Dam near Burgin, Kentucky

The U.S. Geological Survey (USGS) created bathymetric-contour and water-velocity vector maps for portions of Lake Herrington within 600 feet of the face of Dix Dam near Burgin, Kentucky. The mapping was in support of a study of noninvasive acoustic technology for assessing structural integrity of dams, both as a routine inspection tool or as an emergency tool during hydrologic events, such as high water or flooding. In April 2010, scientists from the USGS used a boat-mounted transducer and echo sounder to obtain bathymetric data to characterize lakebed relief and sediment distribution under a closed-intake condition. Also in April 2010, an acoustic Doppler current profiler was employed to measure water velocity and flow direction in the lake to locate velocities moving toward the dam face and, possibly, dam leakage. The bathymetric survey showed the present condition of fill in the reservoir since the dam was completed, as well as provided an outline of the lake floor. The velocity survey indicated no discernible flow pattern or direction within the study area; only one transect had shown a difference from the others that was noticeable. The noninvasive acoustic bathymetric and velocity surveys used during the case study showed promise in locating potential dam or intake maintenance areas. Additional case studies throughout the Nation are needed to more clearly define whether the methods for noninvasive bathymetric and velocity surveys for dam safety will be successful in a variety of settings.

Kentucky↗

USGS2010

Bathymetric and Velocimetric Survey and Assessment of Habitat for Pallid Sturgeon on the Mississippi River in the Vicinity of the Proposed Interstate 70 Bridge at St. Louis, Missouri

A bathymetric and velocimetry survey was conducted on the Mississippi River in the vicinity of a proposed new bridge for Interstate 70 at St. Louis, Missouri. A multibeam echo sounder mapping system and an acoustic Doppler current profiler were used to obtain channel-bed elevations and vertically averaged and near-bed velocities for a 3,545-foot (1,080-meter) long reach of the Mississippi River approximately 1,935 feet (590 meters) wide from the Illinois to Missouri banks. Data from the 2009 survey were used to determine the conditions of the benthic habitat in the vicinity of the proposed Interstate 70 bridge. The channel-bed elevations ranged from approximately 346 feet (105.46 meters) to 370 feet (112.78 meters) above the North American Vertical Datum of 1988 in a majority of the channel except for the channel banks. Large dune features up to 12.5 feet (3.81 meters) high were present in the middle of the channel, and numerous smaller dunes and many ripples as smaller features were superimposed on the larger dunes. However, it is uncertain if the large dune features present in mid-channel are long-term features or an artifact of the seasonal flooding on the Mississippi River. A substantial scour depression was present on the right descending bank (Missouri side) near the downstream end of the study area, as well as other smaller scour holes near the instream barge mooring structures on the Missouri bank. The vertically averaged velocities acquired with the acoustic Doppler current profiler ranged from approximately 2 feet per second (0.61 meters per second) along the channel margins to approximately 7.0 feet per second (2.13 meters per second) in the main channel, with an average velocity of 5.5 feet per second (1.68 meters per second) in mid-channel. The orientation of the vertically averaged velocity vectors showed flow crossing from the Illinois bank to the Missouri bank from upstream to downstream in the study area, which was confirmed by the orientation of the large dune features in mid-channel and a shift in the channel thalweg from the Illinois bank to the Missouri bank. The near-bottom velocities acquired with the acoustic Doppler current profiler ranged from 0.3 to 7.0 feet per second (0.09 to 2.13 meters per second), and the effects of the large dune features were apparent in the more random scattering of the velocity vectors, the low velocities downstream from the dunes, and higher velocities near the crests of the dunes. Despite the considerable physical complexity of this site because of the arrangement of large sand dunes in the middle of the channel, existing studies do not document persistent use of these deep, fast, main-channel habitats by pallid sturgeon. Narrow channel-margin areas on both banks having relatively low velocity, high depth slope, and high velocity gradients are similar to adult migration habitats as documented on the Missouri River downstream from Kansas City, Missouri. Although the reach generally lacks features associated with sturgeon habitat selection on the Middle Mississippi River, the barge mooring areas on the right descending bank have topographic complexity and contain large woody debris and small patches of probable gravel-cobble substrate that may have positive habitat value for sturgeon or other species. Furthermore, telemetry studies have documented sturgeon migrating upstream and downstream through this reach as adults, and they probably drift downstream through this reach as free-embryo larvae. Successful upstream migration may depend on availability of areas with hydraulic complexity and relatively low velocities, as presently exist on the margins of the site. Additionally, complexity at the channel margin may provide areas where larvae settle out from drifting in the main current or may act to slow bulk drift rates. Construction of bridge piers close to the banks will likely alter hydraulics and sediment transport on the channel margins and may result in substanti

Scientific Investigations Report↗

USGS2016

Suspended-sediment concentrations, bedload, particle sizes, surrogate measurements, and annual sediment loads for selected sites in the lower Minnesota River Basin, water years 2011 through 2016

Accurate measurements of fluvial sediment are important for assessing stream ecological health, calculating flood levels, computing sediment budgets, and managing and protecting water resources. Sediment-enriched rivers in Minnesota are a concern among Federal, State, and local governments because turbidity and sediment-laden waters are the leading impairments and affect more than 6,000 miles of rivers in Minnesota. The suspended sediment in the lower Minnesota River is deleterious, contributing about 75 to 90 percent of the suspended sediment being deposited into Lake Pepin. The Saint Paul District of the U.S. Army Corps of Engineers and the Lower Minnesota River Watershed District collaborate to maintain a navigation channel on the lower 14.7 miles of the Minnesota River through scheduled dredging operations. The Minnesota Pollution Control Agency has adopted a sediment-reduction strategy to reduce sediment in the Minnesota River by 90 percent by 2040. The U.S. Geological Survey, in cooperation with the U.S. Army Corps of Engineers, the Minnesota Pollution Control Agency, and the Lower Minnesota River Watershed District, collected suspended-sediment, bedload, and particle-size samples at five sites in the lower Minnesota River Basin during water years 2011 through 2014 and surrogate measurements of acoustic backscatter at one of these sites on the lower Minnesota River during water years 2012 through 2016 to quantify sediment loads and improve understanding of sediment-transport relations. Annual sediment loads were computed for calendar years 2011 through 2014. Data collected from water years 2011 through 2014 indicated that two tributaries, Le Sueur River and High Island Creek, had the highest sediment yield and concentrations of suspended sediment. These tributaries also had greater stream gradients than the sites on the Minnesota River. Suspended fines were greater than suspended sand at all sites in the study area. The range of median particle sizes matched the range for stream gradients from greatest to smallest. Bedload ranged from 3 to 20 percent of the total load at the Le Sueur River, Minnesota River at Mankato, and High Island Creek and was less than 1 percent of the total load at the Minnesota River near Jordan and at Fort Snelling State Park. The reach of the Minnesota River between Mankato and Jordan is a major source of sediment, with the sediment yield at Jordan being two and a half times greater than at Mankato. Between Jordan and Fort Snelling, the sediment yield decreases substantially, which indicates that the Minnesota River in this reach is a sink for sediment. Surrogate measurements (acoustic backscatter) collected with suspended-sediment concentration data from water years 2012 through 2016 from the Minnesota River at Fort Snelling State Park indicated strong relations between the acoustic backscatter and suspended-sediment concentrations. These results point to the dynamic nature of sediment aggradation, degradation, and transport in the Minnesota River Basin. The analyses described in this report will improve the understanding of sediment-transport relations and sediment budgets in the Minnesota River Basin.

Minnesota↗

USGS2025

Fluvial sediment dynamics in the Shoshone River and tributaries around Willwood Dam, Park County, Wyoming

Sedimentation affects many of the aging reservoirs in the United States. Dams and water diversions from rivers have been central elements of infrastructure supporting agricultural irrigation in the arid and semiarid regions of the Western United States for more than a century. The Willwood Irrigation District diversion dam (hereafter referred to as “Willwood Dam”) in Park County, Wyoming, is approximately 12 miles northeast of Cody, Wyo.; has a structural height of 70 feet; and impounds the Shoshone River for diversion into the Willwood Canal. Willwood Dam is part of a larger irrigation scheme supported by water storage in the much larger Buffalo Bill Dam, which is approximately 20 miles upstream. In October 2016, renovation construction activities at Willwood Dam and the Willwood Canal caused an unplanned evacuation of nearly 96,000 cubic yards of fine sediment. The fine sediment release in 2016 raised concerns that ongoing sediment management at Willwood Dam could impose limits on the long-term health of the aquatic ecosystem and fish populations. The U.S. Geological Survey, in cooperation with Wyoming Department of Environmental Quality and Willwood Work Groups 2 and 3, initiated an investigation of the dynamics of sediment transport in the Shoshone River and selected tributaries between Buffalo Bill Dam and Willwood Dam. The goal of the study was to quantify sediment transport into and out of Willwood Dam on an annual, seasonal, and event basis to better understand the relative quantities of sediment coming from natural sources and human activities on the landscape. The study ran from March 2019 through October 2021 and used observations of streamflow, turbidity, and acoustic backscatter collected at streamgages upstream and downstream from Willwood Dam to quantify suspended-sediment loads into and out of the dam during irrigation and fallow seasons, precipitation-runoff events, and deliberate sediment releases. Each tributary’s relative contribution to the sediment load upstream from Willwood Dam was examined using discrete measurements of suspended-sediment concentration and bedload during irrigation and fallow seasons, precipitation events, and stable conditions. Analysis of daily precipitation and temperature data indicated that conditions in the study area during the 2019 agricultural year were wetter and colder than period of record normal, and drier and near normal temperatures for the 2020 and 2021 agricultural years. Not all sediment load records between 2019 and 2021 are complete because of rejected observations (outliers), instrument failures or fouling, and instrument removal for calibrations. Statistical modeling of suspended-sediment concentration using paired values of turbidity and acoustic backscatter produced four models that, after refinement, had coefficients of determination indicating that more than 84 percent of the variance was explained by either turbidity or acoustic backscatter. A system of rules was developed to select the model predictions based on the seasonal operations of Willwood Dam, assumptions about the grain sizes mobilized during these operations, and assumed accuracy of the models at the downstream streamgage (Shoshone River below Willwood Dam, near Ralston, Wyo. [streamgage 06284010]) under different operational conditions. The sediment budget between upstream and downstream estimates of loads was interpreted using the mean predicted values bound by their respective model prediction intervals. When mean predicted loads of one streamgage were contained in the prediction intervals of the other streamgage, and vice-versa, difference in the sediment budget were interpreted as “indeterminate.” Modeled sediment load balances demonstrated the depositional and erosional behaviors expected from the conceptual model of dam operations whereby sediment tends to accumulate during irrigation seasons when the dam is spilling over the top, and sediment tends to evacuate during the fallow seasons when it is flowing through the sluice gates at the base of the dam. The sediment load calculations using the rules-based model criteria indicated that between 14,200 and 380,000 tons of suspended sediment moved through the Shoshone River around Willwood Dam during the irrigation seasons of 2019, 2020, and 2021; 380,000 tons of suspended sediment were transported during the cool, wet year of 2019, and 14,200 tons of suspended sediment were transported in 2020, which was relatively dry. During fallow seasons 2019, 2020, and 2021, which had fewer complete records, between 1,140 and 106,000 tons of suspended sediment was estimated to have moved through the river. For all seasons except fallow season 2022, the models estimated that more sediment was released from the dam than entered the dam, but the modeled mean loads at each streamgage were nearly always within the prediction intervals of each other, making the sediment balance indeterminant. Examination of suspended-sediment loads during irrigation seasons indicated that between 65 and 85 percent of fine sediment was transported during annual high flows and storm events, with the remainder transported during steady, lower streamflows. Examination of suspended loads during fallow seasons indicated that deliberate sediment releases through Willwood Dam accounted for between 39 and 67 percent of the total sediment moved during the fallow seasons. Deliberate sediment releases from Willwood Dam had estimated net exports of between 1,360 and 22,400 tons. Between August 2017 and July 2023, suspended-sediment concentration and bedload sediment samples were collected from 9 tributaries to the Shoshone River during 137 sampling events, including stable and precipitation-runoff conditions. During irrigation season precipitation events, the mean total sediment yields ranged from 0.33 to 9.51 tons per day per square mile; during fallow season precipitation events, the mean total yields ranged from 0.04 to 0.95 ton per day per square mile. The mean total sediment yield per unit area across all samples at each tributary site ranged from 0.26 to 3.08 tons per day per square mile. Bedload was a minor fraction of the total load, constituting a mean of 4 percent across all samples; 3 and 6 percent for events and nonevents, respectively, during irrigation season; and 3 and 1 percent for events and nonevents, respectively, during the fallow season. With the exception of one tributary, Dry Creek, these mean yield values were within the range of watershed-scale background sediment yield values estimated from reservoir surveys and previous suspended-sediment studies. Imagery from irrigation seasons 2012, 2015, 2017, 2019, and 2022 was used to determine the planimetric backwater extent of the pool area in the Shoshone River behind Willwood Dam to identify any changes in sediment storage. Active river channel widths in the Shoshone River upstream from Willwood Dam were all similar between years except 2015, which was determined to be statistically different from all other years. Bathymetric data taken in the pool behind Willwood Dam during three different surveys between November 2017 and April 2022 indicated no statistically significant differences in bed elevations between the years. Results from the planimetric and bathymetric survey data provide multiple lines of evidence indicating that sediment did not accumulate behind the dam within the error of the methods used. Examination of how precipitation affects sediment transport in the Shoshone River upstream from Willwood Dam indicated that accumulated rainfall from the natural runoff events captured during the study period varied from a trace to as much as 4.26 inches, with associated predicted suspended-sediment loads varying from 112 to 232,000 tons of suspended sediment. The behavior of the sediment loads relative to accumulated precipitation did not appear to change depending on irrigation or fallow season. A model of suspended-sediment concentrations relative to the 2-day accumulated precipitation indicated that suspended-sediment concentrations in the Shoshone River upstream from Willwood Dam increased exponentially for accumulations of 0.3 inch or more; such storms accounted for 10 percent or less of precipitation events observed during the 1981 to 2018 period of record. The gaps in records, precision of the instrumentation, and large variation in grain sizes in suspended-sediment mixtures downstream from the dam made closing the sediment budgets for most seasons unattainable. The biggest recent change in sediment storage measured using the planimetric area of deposits behind Willwood Dam took place between 2015 and 2017. The main event between these two measurements was the installation of new Willwood Canal gates in October 2016, which resulted in the large unplanned sediment release. Because the sediment budgets were nearly always indeterminate and the planimetric and bathymetric data indicated little change in the bed and bank material, it is likely that the change in sediment storage behind the dam during the study period was small relative to the precision of the statistical models and other uncertainties. This body of evidence suggests that, averaged during the 3-year study period, no major changes in storage took place, and that the current operations may be keeping storage at near-equilibrium. This condition could have been initiated because the middle sluice gate has now been operational since 2014, and the sediment release in October 2016 evacuated a large amount of legacy sediment from storage. Although the uncertainties are large, sluicing events allow for controlled releases of sediment that contributed to the near equilibrium conditions observed over an annual basis during this study.

Wyoming↗

USGS2012

Design and maintenance of a network for collecting high-resolution suspended-sediment data at remote locations on rivers, with examples from the Colorado River

Management of sand and finer sediment in fluvial settings has become increasingly important for reasons ranging from endangered-species habitat to transport of sediment-associated contaminants. In all rivers, some fraction of the suspended load is transported as washload, and some as suspended bed material. Typically, the washload is composed of silt-and-clay-size sediment, and the suspended bed material is composed of sand-size sediment. In most rivers, as a result of changes in the upstream supply of silt and clay, large, systematic changes in the concentration of the washload occur over time, independent of changes in water discharge. Recent work has shown that large, systematic, discharge-independent changes in the concentration of the suspended bed material are also present in many rivers. In bedrock canyon rivers, such as the Colorado River in Grand Canyon National Park, changes in the upstream tributary supply of sand may cause large changes in the grain-size distribution of the bed sand, resulting in changes in both the concentration and grain-size distribution of the sand in suspension. Large discharge-independent changes in suspended-sand concentration coupled to discharge-independent changes in the grain-size distribution of the suspended sand are not unique to bedrock canyon rivers, but also occur in large alluvial rivers, such as the Mississippi River. These systematic changes in either suspended-silt-and-clay concentration or suspended-sand concentration may not be detectable by using conventional equal-discharge- or equal-width-increment measurements, which may be too infrequently collected relative to the time scale over which these changes in the sediment load are occurring. Furthermore, because large discharge-independent changes in both suspended-silt-and-clay and suspended-sand concentration are possible in many rivers, methods using water discharge as a proxy for suspended-sediment concentration (such as sediment rating curves) may not produce sufficiently accurate estimates of sediment loads. Finally, conventional suspended-sediment measurements are both labor and cost intensive and may not be possible at the resolution required to resolve discharge-independent changes in suspended-sediment concentration, especially in more remote locations. For these reasons, the U.S. Geological Survey has pursued the use of surrogate technologies (such as acoustic and laser diffraction) for providing higher-resolution measurements of suspended-sediment concentration and grain size than are possible by using conventional suspended-sediment measurements alone. These factors prompted the U.S. Geological Survey's Grand Canyon Monitoring and Research Center to design and construct a network to automatically measure suspended-sediment transport at 15-minute intervals by using acoustic and laser-diffraction surrogate technologies at remote locations along the Colorado River within Marble and Grand Canyons in Grand Canyon National Park. Because of the remoteness of the Colorado River in this reach, this network also included the design of a broadband satellite-telemetry system to communicate with the instruments deployed at each station in this network. Although the sediment-transport monitoring network described in this report was developed for the Colorado River in Grand Canyon National Park, the design of this network can easily be adapted for use on other rivers, no matter how remote. In the Colorado River case-study example described in this report, suspended-sediment concentration and grain size are measured at five remote stations. At each of these stations, surrogate measurements of suspended-sediment concentration and grain size are made at 15-minute intervals using an array of different single-frequency acoustic-Doppler side-looking profilers. Laser-diffraction instruments are also used at two of these stations to measure both suspended-sediment concentrations and grain-size distributions. Cross-section calibrations of these instruments have been constructed and verified by using either equal-discharge-increment (EDI) or equal-width-increment (EWI) measurements of the velocity-weighted suspended-sediment concentration and grain-size distribution. The suspended-silt-and-clay concentration parts of these calibration relations have also included information from EDI- or EWI-calibrated samples collected by automatic pump samplers. Three of the monitoring stations are equipped with two-way satellite broadband telemetry systems that operate once a day to remotely monitor and program the instruments and download data. Data from these stations are typically downloaded twice per month; data from stations without satellite-telemetry systems are downloaded during site visits, which occur every 2 months or semiannually, depending on the remoteness of the site. Upon downloading and processing, suspended-silt-and-clay concentration, suspended-sand concentration, and suspended-sand median grain size are posted on the World Wide Web. Satellite telemetry in combination with the high-resolution sediment surrogate measurements can generate near-real-time suspended-sediment-concentration and grain-size data (limited only by the time required to download the instruments and process the data). The approach for measuring suspended-sediment concentration and grain size using this monitoring network is more practical, and can be done at a much lower cost and with higher temporal resolution, than any other method.

Arizona;Nevada;Utah↗

USGS2001

Freshwater flow from estuarine creeks into northeastern Florida Bay

Water-level, water-velocity, salinity, and temperature data were collected from selected estuarine creeks to compute freshwater flow into northeastern Florida Bay. Calibrated equations for determining mean velocity from acoustic velocity were obtained by developing velocity relations based on direct acoustic measurements, acoustic line velocity, and water level. Three formulas were necessary to describe flow patterns for all monitoring sites, with R2 (coefficient of determination) values ranging from 0.957 to 0.995. Cross-sectional area calculations were limited to the main channel of the creeks and did not include potential areas of overbank flow. Techniques also were used to estimate discharge at noninstrumented sites by establishing discharge relations to nearby instrumented sites. Results of the relation between flows at instrumented and noninstrumented sites varied with R2 values ranging from 0.865 to 0.99. West Highway Creek was used to estimate noninstrumented sites in Long Sound, and Mud Creek was used to estimate East Creek in Little Madeira Bay. Mean monthly flows were used to describe flow patterns and to calculate net flow along the northeastern coastline. Data used in the study were collected from October 1995 through September 1999, which includes the El Nino event of 1998. During this period, about 80 percent of the freshwater flowing into the bay occurred during the wet season (May-October). The mean freshwater discharge for all five instrumented sites during the wet season from 1996 to 1999 is 106 cubic feet per second. The El Nino event caused a substantial increase (654 percent) in mean flows during the dry season (November-April) at the instrumented sites, ranging from 8.5 cubic feet per second in 1996-97 to 55.6 cubic feet per second in 1997-98. Three main flow signatures were identified when comparing flows at all monitoring stations. The most significant was the magnitude of discharges at Trout Creek, which carries about 50 percent of the total measured freshwater entering northeastern Florida Bay. The mean monthly wet-season (May-October) flow at Trout Creek is about 340 cubic feet per second, compared to 55 cubic feet per second at West Highway Creek, 52 cubic feet per second at Taylor River, 49 cubic feet per second at Mud Creek, and 33 cubic feet per second at McCormick Creek. The other two flow signatures are the decline of freshwater discharge at McCormick Creek at the start of the El Nino event, and the absence of net-negative flows at West Highway Creek. The observed flow distribution within the study area, suggests that the overall flow direction of freshwater in the Everglades wetlands in the lower part of Taylor Slough may have a strong eastward flow component as water approaches the coastline. Data analysis also indicates that Trout Creek could potentially be used as a long-term monitoring station to estimate total freshwater flow into northeastern Florida Bay, provided that the remaining questions regarding flow patterns at McCormick Creek and the creeks in Long Sound are answered and that no major changes in flow characteristics occur in the future.

Water-Resources Investigations Report↗

USGS2002

Evaluation of borehole geophysical logging, aquifer-isolation tests, distribution of contaminants, and water-level measurements at the North Penn Area 5 Superfund Site, Bucks and Montgomery Counties, Pennsylvania

Borehole geophysical logging and aquifer-isolation (packer) tests were conducted at the North Penn Area 5 Superfund site in Bucks and Montgomery Counties, Pa. Caliper, naturalgamma, single-point-resistance, fluid-temperature, fluid-resistivity, heatpulse-flowmeter, and digital acoustic-televiewer logs and borehole television surveys were collected in 32 new and previously drilled wells that ranged in depth from 68 to 302 feet. Vertical borehole-fluid movement direction and rate were measured with a high-resolution heatpulse flowmeter under nonpumping conditions. The suite of logs was used to locate water-bearing fractures, determine zones of vertical borehole-fluid movement, select depths to set packers, and locate appropriate screen intervals for reconstructing new wells as monitoring wells. Aquifer-isolation tests were conducted in four wells to sample discrete intervals and to determine specific capacities of discrete water-bearing zones. Specific capacities of isolated zones during packer testing ranged from 0.12 to 15.30 gallons per minute per foot. Most fractures identified by borehole geophysical methods as water-producing or water-receiving zones produced water when isolated and pumped. The acoustic-televiewer logs define two basic fracture sets, bedding-plane partings with a mean strike of N. 62° E. and a mean dip of 27° NW., and high-angle fractures with a mean strike of N. 58° E. and a mean dip of 72° SE. Correlation of heatpulse-flowmeter data and acoustic-televiewer logs showed 83 percent of identified water-bearing fractures were high-angle fractures.

Pennsylvania↗