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Earth Resources Observation and Science Center hosting services

The Earth Resources Observation and Science (EROS) Center has a long history of leveraging technology in support of Earth science and business applications including data management, processing, and virtualization and complex solutions to visualize and distribute data. It is the aim of EROS to offer operational excellence and service as a key component to the Federal Cloud-Smart directives and Department of the Interior data center consolidation goals. The EROS Center offers space, network, security, and environmental controls and information technology service management. Included with leveraging technology, the EROS Center has industry-leading staff to assist with supporting Earth science and business applications.

Fact Sheet↗

Calibrating geosynchronous and polar orbiting satellites: Sharing best practices

Earth remote sensing optical satellite systems are often divided into two categories—geosynchronous and sun-synchronous. Geosynchronous systems essentially rotate with the Earth and continuously observe the same region of the Earth. Sun-synchronous systems are generally in a polar orbit and view differing regions of the Earth at the same local time. Although similar in instrument design, there are enough differences in these two types of missions that often the calibration of the instruments can be substantially different. Thus, respective calibration teams develop independent methods and do not interact regularly or often. Yet, there are numerous areas of overlap and much to learn from one another. To address this issue, a panel of experts from both types of systems was convened to discover common areas of concern, areas where improvements can be made, and recommendations for the future. As a result of the panelist’s efforts, a set of eight recommendations were developed. Those that are related to improvements of current technologies include maintaining sun-synchronous orbits (not allowing orbital decay), standardization of spectral bandpasses, and expanded use of well-developed calibration techniques such as deep convective clouds, pseudo invariant calibration sites, and lunar methodologies. New techniques for expanded calibration capability include using geosynchronous instruments as transfer radiometers, continued development of ground-based prelaunch calibration technologies, expansion of RadCalNet, and development of space-based calibration radiometer systems.

Remote Sensing↗

U.S. Geological Survey Colorado River Basin Actionable and Strategic Integrated Science and Technology (ASIST)—Information Management Technology Plan

Introduction More than 840 publications, 575 data releases, and 330 project web pages from the U.S. Geological Survey (USGS) pertain to the Colorado River Basin. Limited interconnections between Colorado River Basin publications, data, and web pages restrict the ability to synthesize and interpret scientific resources. Currently, these pieces are spread across multiple isolated locations, internal systems, data repositories, and local offices. The increasing size, complexity, and diversity of Colorado River Basin data creates additional need for integration. These different data types—including discrete, continuous, aerial, remote sensing, geophysical, geospatial, and other types in varied formats—are collected over numerous time and space scales and require data-intensive science and technology to integrate. Information management technology (IMT) resources are enterprise capabilities that the USGS workforce can leverage at multiple scales with consistent interoperable solutions to better facilitate integrated science. The USGS 21st Century Science Strategy directs the USGS to establish enterprise IMT capabilities that support integrated work through interoperable software and database solutions at multiple scales. This Information Management Technology Plan identifies nine steps to leverage new and existing technologies, data, models, and scientific knowledge to support integrated science projects conducted across the Colorado River Basin. These steps are transferable to integrated-science studies in other locations.

Arizona, Colorado, Nevada, New Mexico, Utah, Wyomi↗

Book review: Spatial capture-recapture

Understanding how animals use space is a vital aspect of conservation planning and wildlife management. Technological developments (e.g., increased computer power and desktop geographic information system [GIS] applications) are bringing the ability to analyze spatial data sets to the individual biologist. Therefore, it is not surprising that methodologies have been developed to incorporate space into capture-recapture models, which are some of the most fundamental models in the field of wildlife ecology. Spatial Capture-Recapture (hereafter SCR) is a timely and informative contribution that summarizes the history and motivation behind SCR models, in addition to providing details of the methodological framework that allows the reader to develop and customize SCR models to address their own ecological questions. Review info: Spatial Capture-Recapture. By J. Andrew Royle, Richard B. Chandler, Rahel Sollmann, and Beth Gardner, 2014. ISBN: 978-0124059399, 577 pp.

Journal of Wildlife Management↗

Explore the virtual side of earth science

Scientists have always struggled to find an appropriate technology that could represent three-dimensional (3-D) data, facilitate dynamic analysis, and encourage on-the-fly interactivity. In the recent past, scientific visualization has increased the scientist's ability to visualize information, but it has not provided the interactive environment necessary for rapidly changing the model or for viewing the model in ways not predetermined by the visualization specialist. Virtual Reality Modeling Language (VRML 2.0) is a new environment for visualizing 3-D information spaces and is accessible through the Internet with current browser technologies. Researchers from the U.S. Geological Survey (USGS) are using VRML as a scientific visualization tool to help convey complex scientific concepts to various audiences. Kevin W. Laurent, computer scientist, and Maura J. Hogan, technical information specialist, have created a collection of VRML models available through the Internet at Virtual Earth Science (virtual.er.usgs.gov).

Fact Sheet↗

Porosity and pore size distribution in a sedimentary rock: Implications for the distribution of chlorinated solvents

Characterizing properties of the rock matrix that control retention and release of chlorinated solvents is essential in evaluating the extent of contamination and the application of remediation technologies in fractured rock. Core samples from seven closely spaced boreholes in a mudstone subject to trichloroethene (TCE) contamination were analyzed using Mercury Intrusion Porosimetry to investigate porosity and pore size distribution as a function of mudstone characteristics, and depth and lateral extent in the aquifer; organic carbon content was also evaluated to identify the potential for adsorption. Porosity and retardation factor varied over two orders of magnitude, with the largest porosities and largest retardation factors associated with carbon-rich mudstone layers. Larger porosities were also measured in the shallow rock that has been subject to enhanced groundwater flow. Porosity also varied over more than an order of magnitude in spatially continuous mudstone layers. The analyses of the rock cores indicated that the largest pore diameters may be accessible to entry of the nonaqueous form of TCE. Although the porosity associated with the largest pore diameters is small (~ 0.1%), that volume of TCE can significantly affect the total TCE that is retained in the rock matrix. The dimensions of the largest pore diameters may also be accessible to microbes responsible for reductive dechlorination; however, the small percentage of the pore space that can accommodate microbes may limit the extent of reductive dechlorination in the rock matrix.

Journal of Contaminant Hydrology↗

System characterization report on the German Aerospace Center (DLR) Earth Sensing Imaging Spectrometer (DESIS)

Executive Summary This report addresses system characterization of the German Aerospace Center (DLR) Earth Sensing Imaging Spectrometer (DESIS) and is part of a series of system characterization reports produced and delivered by the U.S. Geological Survey Earth Resources Observation and Science Cal/Val Center of Excellence. These reports present the methodology and procedures for characterization and the technical and operational information about the specific sensing system being evaluated. These reports also provide a description of data measurements, data retention practices, and data analysis results and provide system characterization conclusions. In partnership with Teledyne Brown Engineering, DLR built the DESIS hyperspectral instrument, which Teledyne Brown Engineering then integrated onto its International Space Station-based imaging platform, the Multi-User System for Earth Sensing. DLR developed the processing software and, together with Innovative Imaging and Research, completes the validation and calibration of the data products. DESIS was launched in 2018, and the data are used for scientific research in atmospheric physics and Earth sciences. The DESIS sensor contributes to the scientific and commercial utilization of the International Space Station and helps to further hyperspectral remote sensing technologies for future satellites. More information on DLR satellites and sensors is included within the “2020 Joint Agency Commercial Imagery Evaluation—Remote Sensing Satellite Compendium” and at https://www.dlr.de/DE/Home/home_node.html . The Earth Resources Observation and Science Cal/Val Center of Excellence system characterization team completed data analyses to characterize the geometric (interior and exterior), radiometric, and spatial performances. Results of these analyses indicate that DESIS has an interior geometric performance of less than a 3.30-meter (less than 0.11 pixel) root mean square error in band-to-band registration, an exterior geometric performance in the range of a 2.40- (0.08 pixel) to 17.40-meter (0.58 pixel) offset in comparison to the Landsat 8 Operational Land Imager, a radiometric performance in the range of −0.013 to 1.011 (offset and slope), and a spatial performance for band 130 of 1.5 pixels at full width at half maximum, with a modulation transfer function at a Nyquist frequency of 0.167.

Open-File Report↗

Accounting for location uncertainty in azimuthaltelemetry data improves ecological inference

Background Characterizing animal space use is critical for understanding ecological relationships. Animal telemetry technology has revolutionized the fields of ecology and conservation biology by providing high quality spatial data on animal movement. Radio-telemetry with very high frequency (VHF) radio signals continues to be a useful technology because of its low cost, miniaturization, and low battery requirements. Despite a number of statistical developments synthetically integrating animal location estimation and uncertainty with spatial process models using satellite telemetry data, we are unaware of similar developments for azimuthal telemetry data. As such, there are few statistical options to handle these unique data and no synthetic framework for modeling animal location uncertainty and accounting for it in ecological models. We developed a hierarchical modeling framework to provide robust animal location estimates from one or more intersecting or non-intersecting azimuths. We used our azimuthal telemetry model (ATM) to account for azimuthal uncertainty with covariates and propagate location uncertainty into spatial ecological models. We evaluate the ATM with commonly used estimators (Lenth (1981) maximum likelihood and M-Estimators) using simulation. We also provide illustrative empirical examples, demonstrating the impact of ignoring location uncertainty within home range and resource selection analyses. We further use simulation to better understand the relationship among location uncertainty, spatial covariate autocorrelation, and resource selection inference. Results We found the ATM to have good performance in estimating locations and the only model that has appropriate measures of coverage. Ignoring animal location uncertainty when estimating resource selection or home ranges can have pernicious effects on ecological inference. Home range estimates can be overly confident and conservative when ignoring location uncertainty and resource selection coefficients can lead to incorrect inference and over confidence in the magnitude of selection. Furthermore, our simulation study clarified that incorporating location uncertainty helps reduce bias in resource selection coefficients across all levels of covariate spatial autocorrelation. Conclusion The ATM can accommodate one or more azimuths when estimating animal locations, regardless of how they intersect; this ensures that all data collected are used for ecological inference. Our findings and model development have important implications for interpreting historical analyses using this type of data and the future design of radio-telemetry studies.

Movement Ecology↗

Mars cartography: the 1:5,000,000 map series

This catalog illustrates the 1:5,000,000 series of Mars base maps being compiled as part of the Mariner 9 scientific data reduction effort. This effort is sponsored by four different Centers within the National Aeronautics and Space Administration: 1) The Jet Propulsion Laboratory, California Institute of Technology, 2) The Langley Research Center, 3) NASA Headquarters, and 4) The Planetology Programs Office at NASA Headquarters. The catalog will be updated periodically as new materials become available, and will eventually be expanded to include cartographic products at scales of 1:1, 000, 000 and 1:250,000. Detailed discussions of the many aspects of Mars cartography are given in papers listed in the bibliography. Only brief notes are given here to aid the reader's understanding of existing products. Data returned by Mariner 9 spacecraft permit detailed mapping of landforms with dimensions as small as 1 to 3 km over the entire surface of Mars. A few special areas can be mapped to show landforms with dimensions as small as 100 m. Prior to the use of spacecraft television, telescopic views of the planet resolved only light and dark markings having dimensions greater than 100 km. Topographic features as such have not been identified telescopically. It was not until the flights of Mariners 4, 6, and 7 that Martian surface topography was revealed. High resolution pictures taken by these spacecraft covered only 20% of theplanet. By chance, the areas photographed by these spacecraftconsisted mostly of cratered terrain and no data were obtained thatsuggested the presence of the spectacular volcanoes and canyonsrevealed by the first time by Mariner 9. Mariner 9 covered at least 70% of the surface of Mars with pictures resolving features 1 to 2 km in size and the remainder with pictures resolving features about 3 km in size. These pictures, therefore, are now the definitive sources of data for the cartography of Mars and, because of their completeness, are not likely to be surpassed in this decade or perhaps this century.

Open-File Report↗

The cartographic and scientific application of ERTS-1 imagery in polar regions

The first Earth Resources Technology Satellite (ERTS-1), launched by the National Aeronautics and Space Administration in. July 1972, is providing valuable data for investigations of the most inaccessible and hostile regions of the Earth the Arctic and Antarctic. ERTS images and map products derived from them offer a whole new dimension in source material for multidiscipline investigations in the earth sciences. For the first time scientists can view synoptic, repetitive scenes of the polar regions in four spectral bands. Ongoing experiments funded by NASA and conducted in the U.S. Geological Survey have demonstrated the feasibility of revising coastlines on maps of Antarctica, detected gross changes in the northern limits of the three largest ice shelves in the world, and led to the discovery of uncharted mountain ranges.

Journal of Research of the U.S. Geological Survey↗

Hydrogeologic aspects of structural deformation in the northern Gulf of Mexico Basin

The first Earth Resources Technology Satellite (ERTS-1), launched by the National Aeronautics and Space Administration in.July 1972, is providing valuable data for investigations of the most inaccessible and hostile regions of the Earth the Arctic and Antarctic. ERTS images and map products derived from them offer a whole new dimension in source material for multidiscipline investigations in the earth sciences. For the first time scientists can view synoptic, repetitive scenes of the polar regions in four spectral bands. Ongoing experiments funded by NASA and conducted in the U.S. Geological Survey have demonstrated the feasibility of revising coastlines on maps of Antarctica, detected gross changes in the northern limits of the three largest ice shelves in the world, and led to the discovery of uncharted mountain ranges.

Louisiana, Texas↗

Weathering a Perfect Storm from Space

Extreme space-weather events — intense solar and geomagnetic storms — have occurred in the past: most recently in 1859, 1921 and 1989. So scientists expect that, sooner or later, another extremely intense spaceweather event will strike Earth again. Such storms have the potential to cause widespread interference with and damage to technological systems. A National Academy of Sciences study projects that an extreme space-weather event could end up costing the American economy more than $1 trillion. The question now is whether or not we will take the actions needed to avoid such expensive consequences. Let’s assume that we do. Below is an imagined scenario of how, sometime in the future, an extreme space-weather event might play out.

Earth Magazine↗

EROS: A space program for Earth resources

The EROS Program, administered by the U. S. Geological Survey, works with representatives of departmental bureaus and offices to coordinate research and application of remote-sensing technology to the day to-day operations of the department. Most of the research and applications have been made possible by the experimental data acquisition systems of the National Aeronautics and Space Administration (NASA). In particular, the EROS Program uses data from the Earth Resources Technology Satellite (ERTS), from the Earth Resources Experiment Package (EREP) of Skylab, and from NASA's Aircraft Program.

General Information Product↗

Acoustic space occupancy: Combining ecoacoustics and lidar to model biodiversity variation and detection bias across heterogeneous landscapes

There is global interest in quantifying changing biodiversity in human-modified landscapes. Ecoacoustics may offer a promising pathway for supporting multi-taxa monitoring, but its scalability has been hampered by the sonic complexity of biodiverse ecosystems and the imperfect detectability of animal-generated sounds. The acoustic signature of a habitat, or soundscape, contains information about multiple taxa and may circumvent species identification, but robust statistical technology for characterizing community-level attributes is lacking. Here, we present the Acoustic Space Occupancy Model, a flexible hierarchical framework designed to account for detection artifacts from acoustic surveys in order to model biologically relevant variation in acoustic space use among community assemblages. We illustrate its utility in a biologically and structurally diverse Amazon frontier forest landscape, a valuable test case for modeling biodiversity variation and acoustic attenuation from vegetation density. We use complementary airborne lidar data to capture aspects of 3D forest structure hypothesized to influence community composition and acoustic signal detection. Our novel analytic framework permitted us to model both the assembly and detectability of soundscapes using lidar-derived estimates of forest structure. Our empirical predictions were consistent with physical models of frequency-dependent attenuation, and we estimated that the probability of observing animal activity in the frequency channel most vulnerable to acoustic attenuation varied by over 60%, depending on vegetation density. There were also large differences in the biotic use of acoustic space predicted for intact and degraded forest habitats, with notable differences in the soundscape channels predominantly occupied by insects . This study advances the utility of ecoacoustics by providing a robust modeling framework for addressing detection bias from remote audio surveys while preserving the rich dimensionality of soundscape data, which may be critical for inferring biological patterns pertinent to multiple taxonomic groups in the tropics. Our methodology paves the way for greater integration of remotely sensed observations with high-throughput biodiversity data to help bring routine, multi-taxa monitoring to scale in dynamic and diverse landscapes.

Mato Grosso↗

Volcano geodesy: Challenges and opportunities for the 21st century

Intrusions of magma beneath volcanoes deform the surrounding rock and, if the intrusion is large enough, the overlying ground surface. Numerical models generally agree that, for most eruptions, subsurface volume changes are sufficient to produce measurable deformation at the surface. Studying this deformation can help to determine the location, volume, and shape of a subsurface magma body and thus to anticipate the onset and course of an eruption. This approach has been successfully applied at many restless volcanoes, especially basaltic shields and silicic calderas, using various geodetic techniques and sensors. However, its success at many intermediate-composition strato-volcanoes has been limited by generally long repose intervals, steep terrain, and structural influences that complicate the history and shape of surface deformation. These factors have made it difficult to adequately characterize deformation in space and time at many of the world's dangerous volcanoes. Recent technological advances promise to make this task easier by enabling the acquisition of geodetic data of high spatial and temporal resolution from Earth-orbiting satellites. Synthetic aperture radar interferometry (InSAR) can image ground deformation over large areas at metre-scale resolution over time-scales of a month to a few years. Global Positioning System (GPS) stations can provide continuous information on three-dimensional ground displacements at a network of key sites -information that is especially important during volcanic crises. By using InSAR to determine the shape of the displacement field and GPS to monitor temporal changes at key sites, scientists have a much better chance to capture geodetic signals that have so far been elusive at many volcanoes. This approach has the potential to provide longer-term warnings of impending volcanic activity than is possible with other monitoring techniques.

Philosophical Transactions of the Royal Society A:↗

Landsat Data Continuity Mission (LDCM) space to ground mission data architecture

The Landsat Data Continuity Mission (LDCM) is a scientific endeavor to extend the longest continuous multi-spectral imaging record of Earth's land surface. The observatory consists of a spacecraft bus integrated with two imaging instruments; the Operational Land Imager (OLI), built by Ball Aerospace & Technologies Corporation in Boulder, Colorado, and the Thermal Infrared Sensor (TIRS), an in-house instrument built at the Goddard Space Flight Center (GSFC). Both instruments are integrated aboard a fine-pointing, fully redundant, spacecraft bus built by Orbital Sciences Corporation, Gilbert, Arizona. The mission is scheduled for launch in January 2013. This paper will describe the innovative end-to-end approach for efficiently managing high volumes of simultaneous realtime and playback of image and ancillary data from the instruments to the reception at the United States Geological Survey's (USGS) Landsat Ground Network (LGN) and International Cooperator (IC) ground stations. The core enabling capability lies within the spacecraft Command and Data Handling (C&DH) system and Radio Frequency (RF) communications system implementation. Each of these systems uniquely contribute to the efficient processing of high speed image data (up to 265Mbps) from each instrument, and provide virtually error free data delivery to the ground. Onboard methods include a combination of lossless data compression, Consultative Committee for Space Data Systems (CCSDS) data formatting, a file-based/managed Solid State Recorder (SSR), and Low Density Parity Check (LDPC) forward error correction. The 440 Mbps wideband X-Band downlink uses Class 1 CCSDS File Delivery Protocol (CFDP), and an earth coverage antenna to deliver an average of 400 scenes per day to a combination of LGN and IC ground stations. This paper will also describe the integrated capabilities and processes at the LGN ground stations for data reception using adaptive filtering, and the mission operations approach fro- the LDCM Mission Operations Center (MOC) to perform the CFDP accounting, file retransmissions, and management of the autonomous features of the SSR.

Conference Paper↗

Honolulu Magnetic Observatory

Tucked in a grove of thorny mesquite trees, on an ancient coral reef on the south side of the Hawaiian island of Oahu, west of Pearl Harbor, a small unmanned observatory quietly records the Earth’s time-varying magnetic field. The Honolulu Magnetic Observatory is 1 of 14 that the U.S. Geological Survey Geomag­netism Program operates at various locations across the United States and its territories. Data from these observatories, Honolulu, and those operated by institutions in foreign countries, record a variety of magnetic signals related to a wide diversity of physical phenomena in the Earth’s interior and its surrounding outer-space environment. USGS magnetic observatory operations are an integral part of a U.S. National Space Weather Strategy for monitoring and assessing natural hazards that potentially threaten important technological systems.

Hawaii↗

Museum metabarcoding: a novel method revealing gut helminth communities of small mammals across space and time

Natural history collections spanning multiple decades provide fundamental historical baselines to measure and understand changing biodiversity. New technologies such as next generation DNA sequencing (NGS) have considerably increased the potential of museum specimens to address significant questions regarding the impact of environmental changes on host and parasite/pathogen dynamics. We developed a new technique to identify intestinal helminth parasites and applied it to shrews (Eulipotyphla: Soricidae) because they are ubiquitous, occupy diverse habitats, and host a diverse and abundant parasite fauna. Notably, we included museum specimens preserved in various ways to explore the efficacy of using metabarcoding analyses that may enable identification of helminth symbiont communities from historical archives. We successfully sequenced the parasite communities (using 12S mtDNA, 16S mtDNA, 28S rDNA) of 23 whole gastrointestinal (GI) tracts. All GI tracts were obtained from the Museum of Southwestern Biology (MSB), USA, and from recent field collections, varying both in time since fixation (ranging from 4 months to 16 years) and preservation method (70% or 95% ethanol stored at room temperature, or flash frozen in liquid nitrogen and stored at -80°C). Our proof of concept demonstrates the feasibility of applying NGS techniques to authoritatively identify the parasite/pathogen communities within whole GI tracts from museum specimens of varying age and fixation, and the value of future preservation of host-associated whole GI tracts in public research archives. This powerful approach facilitates future comparative examinations of the distributions and interactions among multiple associated groups of organisms through time and space.

International Journal for Parasitology↗