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USGS2012

Relations between retired agricultural land, water quality, and aquatic-community health, Minnesota River Basin

The relative importance of agricultural land retirement on water quality and aquatic-community health was investigated in the Minnesota River Basin. Eighty-two sites, with drainage areas ranging from 4.3 to 2200 km 2 , were examined for nutrient concentrations, measures of aquatic-community health (e.g., fish index of biotic integrity [IBI] scores), and environmental factors (e.g., drainage area and amount of agricultural land retirement). The relation of proximity of agricultural land retirement to the stream was determined by calculating the land retirement percent in various riparian zones. Spearman's rho results indicated that IBI score was not correlated to the percentage of agricultural land retirement at the basin scale ( p = 0.070); however, IBI score was correlated to retired land percentage in the 50- to 400-m riparian zones surrounding the streams ( p < 0.05), indicating that riparian agricultural land retirement may have more influence on aquatic-community health than does agricultural land retirement in upland areas. Multivariate analysis of covariance and analysis of covariance models indicated that other environmental factors (such as drainage area and lacustrine and palustrine features) commonly were correlated to aquatic-community health measures, as were in-stream factors (standard deviation of water depth and substrate type). These results indicate that although agricultural land retirement is significantly related to fish communities as measured by the IBI scores, a combination of basin, riparian, and in-stream factors act together to influence IBI scores.

Minnesota↗

USGS1985

Trends and effects of organochlorine residues on Oregon and Nevada wading birds, 1979-83

The incidence of DDT (parent compound) declined significantly in the eggs of Black-crowned Night-Herons (Nycticorax nycticorax), White-faced Ibis (Plegadis chihi), and Black-necked Stilts (Himantopus mexicanus), and showed a downward trend in Snowy Egrets (Egretta thula). Mean DDE residues (breakdown product of DDT) in eggs declined significantly in Black-crowned Night-Herons and showed a downward trend in Black-necked Stilts and Snowy Egrets; however, no trend was apparent for White-faced Ibis. Some night-herons, egrets, and ibis laid thin-shelled eggs that cracked; eggshell thickness was negatively correlated with DDE residues in the egg contents. Ibis were the most sensitive species to DDE- induced shell thinning. Generally, reduced reproductive success for ibis started at lower DDE egg residues (3 ppm) than for either Snowy Egrets (5 ppm) or night-herons (8 ppm). Egg residue profiles, band recoveries, biotelemetry studies, and residues in fish and other prey items implicate the southwestern United States (a wintering area) as an important source of DDT-DDE that caused the most serious reproductive problem encountered during the study (in night-herons nesting at Ruby Lake, Nevada). Available evidence indicates that the three other species, together with night- herons from Oregon and Idaho, winter in Latin America.

Idaho, Nevada, Oregon↗

USGS2005

Streamflow, water-quality, and biological data for three tributaries to Lake Houston near Houston, Texas, 2002-04

During 2002-04 the U.S. Geological Survey, in cooperation with the Houston-Galveston Area Council and the Texas Commission on Environmental Quality, conducted a systematic monitoring study on Lake Creek, Peach Creek, and Caney Creek near Houston, Texas, to assess the current water-quality and biological conditions in the three tributaries to Lake Houston. Streamflow and water-quality data (chloride and sulfate, nutrients, biochemical oxygen demand, phytoplankton, indicator bacteria, pesticides, and suspended sediment) were collected at 11 sites, and fish and benthic-macroinvertebrate data were collected at eight of the 11 sites. Graphical comparisons of concentration data for eight water-quality constituents by watershed indicate relatively large differences in concentration distribution among all three watersheds for nitrite plus nitrate nitrogen (medians: Lake, 0.20; Peach, 0.14; and Caney, 0.32 mg/L). Graphical comparisons of these data by season show consistency in distribution of constituent concentrations. The distributions of chlorophyll-a in summer and E. coli bacteria in winter each contain a few relatively large concentrations. Fifty-six species of fish from 15 major families were collected during the study. For all sites except one on Lake Creek, the majority of fish collected were sunfish; minnows dominated at the one Lake Creek site. Invertivores (mostly sunfish and minnows) made up more than 65 percent of the trophic structure, omnivores were the next largest percentage, and piscivores the smallest percentage. Ecoregion-specific index of biotic integrity (ECO-IBI) scores (averages of samples) for three of four upstream Lake Creek sites indicate intermediate aquatic life use, and the most downstream site, high aquatic life use. ECO-IBI scores for the Peach Creek and Caney Creek sites indicate high aquatic life use. The maximum number of aquatic-insect taxa (51) were collected at a site on Peach Creek near Cleveland, and the minimum number of aquatic-insect taxa (17) were collected at site on Caney Creek near New Caney. The benthic-macroinvertebrate index of biotic integrity (B-IBI) scores (averages of samples) for the three upstream Lake Creek sites indicate intermediate aquatic life use, and the B-IBI score for the most downstream site indicates high aquatic life use. B-IBI scores for the Peach Creek sites, in downstream order, are exceptional and high; and scores for the Caney Creek sites, in downstream order, are high and intermediate.

Texas↗

USGS1996

Detailed study of water quality, bottom sediment, and biota associated with irrigation drainage in the Klamath Basin, California and Oregon, 1990-92

The effect of irrigation drainage on the water quality and wildlife of the Klamath Basin in California and Oregon was evaluated during 1990-92 as part of the National Irrigation Water Quality Program of the U.S. Department of the Interior. The study focused on land serviced by the Bureau of Reclamation Klamath Project, which supplies irrigation water to agricultural land in the Klamath Basin and the Lost River Basin. The Tule Lake and Lower Klamath National Wildlife Refuges, managed by the U.S. Fish and Wildlife Service, are in the study area. These refuges provide critical resting and breeding habitat for waterfowl on the Pacific flyway and are dependent on irrigation drainwater from upstream agriculture for most of their water supply. Water-quality characteristics throughout the study area were typical of highly eutrophic systems during the summer months of 1991 and 1992. Dissolved-oxygen concentrations and pH tended to fluctuate each day in response to diurnal patterns of photosynthesis, and frequently exceeded criteria for protection of aquatic organisms. Nitrogen and phosphorus concentrations were generally at or above threshold levels characteristic of eutrophic lakes and streams. At most sites the bulk of dissolved nitrogen was organically bound. Elevated ammonia concentrations were common in the study area, especially downstream of drain inputs. High pH of water increased the toxicity of ammonia, and concentrations exceeded criteria at sites upstream and downstream of irrigated land. Concentrations of ammonia in samples from small drains on the Tule Lake refuge leaseland were higher than those measured in the larger, integrating drains at primary monitoring sites. The mean ammonia concentration in leaseland drains [1.21 milligrams per liter (mg/L)] was significantly higher than the mean concentration in canals delivering water to the leaseland fields (0.065 mg/L) and higher than concentrations reported to be lethal to Daphnia magna (median lethal concentration of 0.66 mg/L). Dissolved-oxygen concentrations also were lower, and Daphnia survivability measured during in situ bioassays was correspondingly lower in the leaseland drains than in water delivery canals. In static laboratory bioassays, water samples collected at the primary monitoring sites caused toxicity in up to 78 percent of Lemna minor tests, in up to 49 percent of Xenopus laevis tests, in 17 percent and 8 percent of Hyalella azteca and Pimephales promelas tests, respectively, and 0 percent in Daphnia magna tests. In situ exposure at the sites caused mortality in more than 83 percent of Pimephales tests and in more than 41 percent of Daphnia and Hyalella tests. Much of the observed toxicity appears to have been caused by low dissolved oxygen, high pH, and ammonia. Although water in the study area was toxic to a variety of organisms, no statistically significant differences in the degree of toxicity between sites were observed above or below irrigated agricultural land in any of the bioassays. Pesticides were frequently detected in water samples collected at the monitoring sites during the 1991 and 1992 irrigation seasons. Among the most frequently detected compounds were the herbicides simazine, metribuzin, EPTC, and metolachlor and the insecticide terbufos. All the insecticides detected were at concentrations substantially below acute toxicity values reported for aquatic organisms. The herbicide acrolein has been used extensively in the basin to manage aquatic plant growth in irrigation canals and drains. The concentration of acrolein was monitored in a canal near Tule Lake after an application in order to evaluate the potential for the pesticide to be transported to refuge waters. Although acrolein concentrations were toxic to fish in the channels adjacent to Tule Lake, very little of the canal water entered the refuge during the monitoring period. Organochlorine pesticide concentrations in 25 surficial sediment samples collected in 1990 were below baseline levels commonly found in soils and sediment. Seventeen sediment samples were analyzed for chlorophenoxy acid herbicides and two samples were analyzed for organophosphorus and carbamate insecticides in 1992. No pesticides were detected in any of these samples. Residues of the trace elements selenium, mercury, and arsenic in algae, invertebrates, fish, and avian eggs revealed no bioaccumulation problems. Concentrations of organochlorine compounds, especially of p,p' DDE, were associated with a mean 11-percent eggshell thinning in white-faced ibis. However, ibis populations appear to be increasing, and some eggs of ibis were relatively low in DDE concentration. DDE concentrations in eggs of western grebes were not as high as in the eggs of ibis. Concentrations and types of organochlorine compounds detected in grebe and ibis eggs were highly variable, indicating that the birds were exposed to these compounds outside the basin. Fish and invertebrates inhabiting drainwater were representative of pollution-tolerant species assemblages. The aquatic communities retained little of their historic ecological structure. Extensive hydrologic modifications and hypereutrophic conditions in Klamath Basin waterways have degraded the quality of aquatic habitat and altered aquatic communities.

California, Oregon↗

USGS1979

Organochlorine residues in six species of estuarine birds, South Carolina, 1971-75

In South Carolina between 1971 and 1975, authors evaluated the occurrence of organochlorine residues in the laughing gull (Larus atricilla), white ibis (Eudocimus albus), glossy ibis (Plegadis falcinellus), American oystercatcher (Haematopus palliatus), willet (Catoptrophorus semipalmatus), and ruddy turnstone (Arenaria interpres). Tissues of birds found dead and eggs were analyzed, eggshell thicknesses were measured, and incidental observations were made of reproductive success and population status. Eggshell thickness of the white bis, American oystercatcher, and laughing gull were not significantly different (P less than 0.05) from the pre-1947 norms. DDE and polychlorinated biphenyls (PCBs) were found most frequently and at the highest concentration in eggs. DDE residues declined significantly in oystercatcher eggs, and declined slightly in laughing gull eggs; no change was noted in white ibis eggs. No consistent trends were found for dieldrin and PCBs. Authors found no obvious problems with reproductive success of any species. Populations of the five species breeding in South Carolina appear stable. The white ibis and laughing gull in South Carolina have experienced population explosions over the past 50 years; the glossy ibis has increased substantially since the first documented breeding records in 1947.

Pesticides Monitoring Journal↗

USGS2005

Historical and current perspectives on fish assemblages of the Snake River, Idaho and Wyoming

The Snake River is the tenth longest river in the United States, extending 1,667 km from its origin in Yellowstone National Park in western Wyoming to its union with the Columbia River at Pasco, Washington. Historically, the main-stem Snake River upstream from the Hells Canyon Complex supported at least 26 native fish species, including anadromous stocks of Chinook salmon Oncorhynchus tshawytscha, steelhead O. mykiss, Pacific lamprey Lampetra tridentata, and white sturgeon Acipenser transmontanus. Of these anadromous species, only the white sturgeon remains in the Snake River between the Hells Canyon Complex and Shoshone Falls. Today, much of the Snake River has been transformed into a river with numerous impoundments and flow diversions, increased pollutant loads, and elevated water temperatures. Current (1993-2002) fish assemblage collections from 15 sites along the Snake River and Henrys Fork contained 35 fish species, including 16 alien species. Many of these alien species such as catfish (Ictaluridae), carp (Cyprinidae), and sunfish (Centrarchidae) are adapted for warmwater impounded habitats. Currently, the Snake River supports 19 native species. An index of biotic integrity (IBI), developed to evaluate large rivers in the Northwest, was used to evaluate recent (1993-2002) fish collections from the Snake River and Henrys Fork in southern Idaho and western Wyoming. Index of biotic integrity site scores and component metrics revealed a decline in biotic integrity from upstream to downstream in both the Snake River and Henrys Fork. Two distinct groups of sites were evident that correspond to a range of IBI scores-an upper Snake River and Henrys Fork group with relatively high biotic integrity (mean IBI scores of 46-84) and a lower Snake River group with low biotic integrity (mean IBI scores of 10-29). Sites located in the lower Snake River exhibited fish assemblages that reflect poor-quality habitat where coldwater and sensitive species are rare or absent, and where tolerant, less desirable species predominate. Increases in percentages of agricultural land, total number of diversions, and number of constructed channels were strongly associated with these decreasing IBI scores.

American Fisheries Society Symposium↗

USGS2000

Evaluating temporal changes in stream condition in three New Jersey rive basins by using an index of biotic integrity

An index of biotic integrity (!B!) modified for New Jersey streams was used to compare changes in stream condition from the 1970s to the 1990s in Delaware, Passaic, and Raritan River Basins. Stream condition was assessed at 88 sampling locations. Mean IBI scores for all basins increased from the 1970s to the 1990s, but the stream-condition category improved (from fair to good) only for the Delaware River Basin. The number of benthic insectivores and the proportion of insectivorous cyprinds increased in all three basins; however, the number of white suckers decreased significantly only in the Delaware River Basin. Results of linear-regression analysis indicate a significant correlation between the percentage of altered land in the basin and change in IBI score (1970s to 1990s) for Delaware River sites. Results of analysis of variance of the rank-transformed IBI scores for the 1970s and 1990s indicate that the three basins was equal in the 1970s. Results of a multiple-comparison test demonstrated that the 1990s IBI values for the Delaware River Basin differed significantly from those for the Passaic and Raritan River Basins. Many factors, such as the imposition of the more stringent standards on water-water and industrial discharges during the 1980s and changes in land-use practices, likely contributed to the change in the Delaware River Basin. A general increase in IBI values for the Passaic, Raritan, and Delaware River Basins over the past 25 years appears to reflect overall improvements in water quality.

New Jersey↗

USGS2006

Effects of contaminants on reproductive success of aquatic birds nesting at Edwards Air Force Base, California

Contamination by organochlorine pesticides (OCs), polychlorinated biphenyls, metals, and trace elements at Edwards Air Force Base (EAFB), located in the Mojave Desert, could adversely affect nesting aquatic birds, especially at the sewage lagoons that comprise Piute Ponds. Estimates of avian reproduction, in conjunction with analyses of eggs and avian foods for contaminant residues, may indicate the potential for negative effects on avian populations. From 1996 to 1999, we conducted studies at the Piute Ponds area of EAFB to evaluate the impacts of contaminants on nesting birds. Avian reproduction was evaluated in 1999. Eggs were collected for chemical analyses in 1996 and 1999, and African clawed frogs (Xenopus laevis), a likely food source, were collected for chemical analyses in 1998. Avian species occupying the higher trophic levels-black-crowned night-heron (Nycticorax nycticorax), white-faced ibis (Plegadis chihi), and American avocet (Recurvirostra americana)-generally bioaccumulated higher concentrations of contaminants in their eggs. Reproductive success and egg hatchability of night-herons and white-faced ibises in the Piute Ponds were similar to results observed at other western colonies. Deformities were observed in only one embryo in this study, but concentrations of contaminants evaluated in this ibis embryo were considered insufficient to have caused the deformities. Because clawed frogs, a primary prey item for night-herons at Piute Ponds, had no detectable levels of any OCs, it is likely that OCs found in night-heron eggs were acquired from the wintering grounds rather than from EAFB. The presence of isomers of dichlorodiphenyltrichloroethane (DDT) in ibis eggs indicated recent exposure, but invertebrates used for food by ibises were not sampled at Piute Ponds, and conclusions about the source of OCs in ibis eggs could not be made. Concentrations of contaminants in random and failed eggs of individual species were not different, and we concluded that contaminants did not cause the observed egg failures. ?? 2006 Springer Science+Business Media, Inc.

Archives of Environmental Contamination and Toxico↗

USGS2008

Grazed riparian management and stream channel response in southeastern Minnesota (USA) streams

The U.S. Department of Agriculture-Natural Resources Conservation Service has recommended domestic cattle grazing exclusion from riparian corridors for decades. This recommendation was based on a belief that domestic cattle grazing would typically destroy stream bank vegetation and in-channel habitat. Continuous grazing (CG) has caused adverse environmental damage, but along cohesive-sediment stream banks of disturbed catchments in southeastern Minnesota, short-duration grazing (SDG), a rotational grazing system, may offer a better riparian management practice than CG. Over 30 physical and biological metrics were gathered at 26 sites to evaluate differences between SDG, CG, and nongrazed sites (NG). Ordinations produced with nonmetric multidimensional scaling (NMS) indicated a gradient with a benthic macroinvertebrate index of biotic integrity (IBI) and riparian site management; low IBI scores associated with CG sites and higher IBI scores associated with NG sites. Nongrazed sites were associated with reduced soil compaction and higher bank stability, as measured by the Pfankuch stability index; whereas CG sites were associated with increased soil compaction and lower bank stability, SDG sites were intermediate. Bedrock geology influenced NMS results: sites with carbonate derived cobble were associated with more stable channels and higher IBI scores. Though current riparian grazing practices in southeastern Minnesota present pollution problems, short duration grazing could reduce sediment pollution if managed in an environmentally sustainable fashion that considers stream channel response. ?? 2008 Springer Science+Business Media, LLC.

Environmental Management↗

USGS2013

Landscape factors and hydrology influence mercury concentrations in wading birds breeding in the Florida Everglades, USA

The hydrology of wetland ecosystems is a key driver of both mercury (Hg) methylation and waterbird foraging ecology, and hence may play a fundamental role in waterbird exposure and risk to Hg contamination. However, few studies have investigated hydrological factors that influence waterbird Hg exposure. We examined how several landscape-level hydrological variables influenced Hg concentrations in great egret and white ibis adults and chicks in the Florida Everglades. The great egret is a visual “exploiter” species that tolerates lower prey densities and is less sensitive to hydrological conditions than is the white ibis, which is a tactile “searcher” species that pursues higher prey densities in shallow water. Mercury concentrations in adult great egrets were most influenced by the spatial region that they occupied in the Everglades (higher in the southern region); whereas the number of days a site was dry during the previous dry season was the most important factor influencing Hg concentrations in adult ibis (Hg concentrations increased with the number of days dry). In contrast, Hg concentrations in egret chicks were most influenced by calendar date (increasing with date), whereas Hg concentrations in ibis chicks were most influenced by chick age, region, and water recession rate (Hg concentrations decreased with age, were higher in the southern regions, and increased with positive water recession rates). Our results indicate that both recent (preceding two weeks) hydrological conditions, and those of the prior year, influence Hg concentrations in wading birds. Further, these results suggest that Hg exposure in wading birds is driven by complex relationships between wading bird behavior and life stage, landscape hydrologic patterns, and biogeochemical processes.

Florida↗

USGS2002

Development of a stream habitat index for the Northern Lakes and Forest Ecoregions

Physical habitat was quantified in 105 randomly selected streams across the Northern Lakes and Forests Ecoregion during 1998 and 1999 to develop a stream habitat index for the region. Physical habitat measures (106) were classified into four groups: substrate, instream cover, riparian zone–land use, and geomorphology–hydrology. Variable reduction procedures yielded seven variables: sinuosity, percent of substrate gravel or larger, percent substrate as detritus or muck, percent of bank with forested cover, amount of bank erosion, number of large logs per 100 m, and mean length of pools. Streams were separated by a gradient value of 3 m/km (low N = 70; high N = 35) and assigned to model and test data sets. For low-gradient streams in the model data set, the seven habitat variables explained 47% of the variation in index of biotic integrity (IBI) scores. To produce the habitat index, the coefficients in the regression were used to weight each of the seven variables. For low-gradient streams in the test data set, the habitat index explained 20% of the variation in IBI scores. A habitat index could not be developed for high-gradient sites, probably due to the low number of sites. Comparison of habitat to IBI scores provides resource managers with a method to evaluate the contribution of habitat quality to the IBI score.

Michigan, Minnesota, Wisconsin↗

USGS2000

The relation of fish community composition to riparian cover and runoff potential in the Minnesota River basin, Minnesota and Iowa, 1997

The relation of fish community composition to riparian cover and runoff potential was investigated in 20 streams in the Minnesota River Basin during the summer of 1997 as part of the U.S. Geological Survey’s National Water-Quality Assessment (NAWQA) Program (fig.1). Analysis of variance statistics indicated significant differences in the composition of the fish community due to both riparian cover (wooded or open) and runoff potential (high or low). An Index of Biotic Integrity (IBI), species richness, and diversity were used to measure the community response and health. Fish communities in streams with significant wooded riparian cover had higher IBI scores, species richness, and diversity than streams with little wooded riparian cover. Streams with low runoff potential had higher IBI scores and species richness than streams with high runoff potential. IBI scores and species richness responded independently to riparian cover and runoff potential. Although both factors were important, riparian cover influenced fish community composition more than runoff potential in these streams, indicating that local factors (close to the stream) dominate landscape or basin-wide factors (Stauffer and others, 2000).

Iowa, Minnesota↗

USGS2016

Comparison of benthos and plankton for selected areas of concern and non-areas of concern in western Lake Michigan Rivers and Harbors in 2012

Recent data are lacking to assess whether impairments still exist at four of Wisconsin’s largest Lake Michigan harbors that were designated as Areas of Concern (AOCs) in the late 1980s due to sediment contamination and multiple Beneficial Use Impairments (BUIs), such as those affecting benthos (macroinvertebrates) and plankton (zooplankton and phytoplankton) communities. During three seasonal sampling events (“seasons”) in May through August 2012, the U.S. Geological Survey collected sediment benthos and water plankton at the four AOCs as well as six less-degraded non-AOCs along the western Lake Michigan shoreline to assess whether AOC communities were degraded in comparison to non-AOC communities. The four AOCs are the Lower Menominee River, the Lower Green Bay and Fox River, the Sheboygan River, and the Milwaukee Estuary. Due to their size and complexity, multiple locations or “subsites” were sampled within the Lower Green Bay and Fox River AOC (Lower Green Bay, the Fox River near Allouez, and the Fox River near De Pere) and within the Milwaukee Estuary AOC (the Milwaukee River, the Menomonee River, and the Milwaukee Harbor) and single locations were sampled at the other AOCs and non-AOCs. The six non-AOCs are the Escanaba River in Michigan, and the Oconto River, Ahnapee River, Kewaunee River, Manitowoc River, and Root River in Wisconsin. Benthos samples were collected by using Hester-Dendy artificial substrates deployed for 30 days and by using a dredge sampler; zooplankton were collected by net and phytoplankton by whole-water sampler. Except for the Lower Green Bay and Milwaukee Harbor locations, communities at each AOC were compared to all non-AOCs as a group and to paired non-AOCs using taxa relative abundances and metrics, including richness, diversity, and an Index of Biotic Integrity (IBI, for Hester-Dendy samples only). Benthos samples collected during one or more seasons were rated as degraded for at least one metric at all AOCs. In the Milwaukee Estuary, benthos richness was lower in the Milwaukee River subsite spring and summer samples and in the Menomonee River subsite spring sample relative to the paired non-AOCs. Benthos diversity and IBIs at the Menomonee River subsite and IBIs at the Milwaukee River subsite and Sheboygan River were significantly lower than at all non-AOCs as a group across all seasons and therefore were rated as degraded. In addition, IBIs at the Lower Menominee River were significantly lower than those at the paired non-AOCs during all seasons and were therefore rated degraded. Benthos at both Fox River subsites and the Milwaukee River subsite were significantly different from their paired non-AOCs during all three seasons, based on a comparison of the relative abundances of taxa using multivariate testing. Metrics for plankton at AOCs were not significantly lower than those at the paired or group non-AOCs during all seasons; however, zooplankton richness in spring at the Sheboygan River and in fall at the Menomonee River subsite was rated as degraded in comparison to paired non-AOCs. Also, zooplankton richness in fall at the Fox River near Allouez subsite and in spring at the Milwaukee River subsite was rated degraded overall because values were lower than at all non-AOCs as a group and lower than at the paired non-AOCs. Zooplankton diversity in fall at the Fox River near Allouez subsite and the Lower Menominee River was rated degraded in comparison to paired non-AOC comparison sites. Zooplankton communities at the Fox River near Allouez subsite were significantly different from the paired non-AOCs when multivariate comparisons were made without rotifers other than A. priodonta . Overall, benthos and zooplankton BUIs remained at the AOCs in 2012 but no AOCs with a phytoplankton BUI were rated degraded in comparison to non-AOCs. The use of a multiple ecological measures, structural and functional, and multiple statistical analyses, biological metrics and multivariate statistics, provided assessments that defined 2012 status of communities relative to less-impaired non-AOCs in the Great Lakes area.

Michigan↗

USGS2017

Evaluation of long-term trends in hydrologic and water-quality conditions, and estimation of water budgets through 2013, Chester County, Pennsylvania

An evaluation of trends in hydrologic and water quality conditions and estimation of water budgets through 2013 was done by the U.S. Geological Survey in cooperation with the Chester County Water Resources Authority. Long-term hydrologic, meteorologic, and biologic data collected in Chester County, Pennsylvania, which included streamflow, groundwater levels, surface-water quality, biotic integrity, precipitation, and air temperature were analyzed to determine possible trends or changes in hydrologic conditions. Statistically significant trends were determined by applying the Kendall rank correlation test; the magnitudes of the trends were determined using the Sen slope estimator. Water budgets for eight selected watersheds were updated and a new water budget was developed for the Marsh Creek watershed. An average water budget for Chester County was developed using the eight selected watersheds and the new Marsh Creek water budget. Annual and monthly mean streamflow, base flow, and runoff were analyzed for trends at 10 streamgages. The periods of record at the 10 streamgages ranged from 1961‒2013 to 1988‒2013. The only statistically significant trend for annual mean streamflow was for West Branch Brandywine Creek near Honey Brook, Pa. (01480300) where annual mean streamflow increased 1.6 cubic feet per second (ft 3 /s) per decade. The greatest increase in monthly mean streamflow was for Brandywine Creek at Chadds Ford, Pa. (01481000) for December; the increase was 47 ft 3 /s per decade. No statistically significant trends in annual mean base flow or runoff were determined for the 10 streamgages. The greatest increase in monthly mean base flow was for Brandywine Creek at Chadds Ford, Pa. (01481000) for December; the increase was 26 ft 3 /s per decade. The magnitude of peaks greater than a base streamflow was analyzed for trends for 12 streamgages. The period of record at the 12 stream gages ranged from 1912‒2012 to 2004–11. Fifty percent of the streamgages showed a small statistically significant increase in peaks greater than the base streamflow. The greatest increase was for Brandywine Creek at Chadds Ford, Pa. (01481000) during 1962‒2012; the increase was 1.8 ft 3 /s per decade. There were no statistically significant trends in the number of floods equal to or greater than the 2-year recurrence interval flood flow. Twenty‒one monitoring wells were evaluated for statistically significant trends in annual mean water level, minimum annual water level, maximum annual water level, and annual range in water-level fluctuations. For four wells, a small statistically significant increase in annual mean water level was determined that ranged from 0.16 to 0.7 feet per decade. There was poor or no correlation between annual mean groundwater levels and annual mean streamflow and base flow. No correlation was determined between annual mean groundwater level and annual precipitation. Despite rapid population growth and land-use change since 1950, there appears to have been little or no detrimental effects on groundwater levels in 21 monitoring wells. Long-term precipitation and temperature data were available from the West Chester (1893‒2013) and Phoenixville, Pa. (1915‒2013) National Oceanic and Atmospheric Administration (NOAA) weather stations. No statistically significant trends in annual mean precipitation or annual mean temperature were determined for either station. Both weather stations had a significant decrease in the number of days per year with precipitation greater than or equal to 0.1 inch. Annual mean minimum and maximum temperatures from the NOAA Southeastern Piedmont Climate Division increased 0.2 degrees Fahrenheit (F) per decade between 1896 and 2014. The number of days with a maximum temperature equal to or greater than 90 degrees F increased at West Chester and decreased at Phoenixville. No statistically significant trend was determined for annual snowfall amounts. Data from 1974 to 2013 for three stream water-quality monitors in the Brandywine Creek watershed were evaluated. The monitors are on the West Branch Brandywine Creek at Modena, Pa. (01480617), East Branch Brandywine Creek below Downingtown, Pa. (01480870), and Brandywine Creek at Chadds Ford, Pa. (01481000). Statistically significant upward trends were determined for annual mean specific conductance at all three stations, indicating the total dissolved solids load has been increasing. If the current trend continues, the annual mean specific conductance could almost double from 1974 to 2050. The increase in specific conductance likely is due to increases in chloride concentrations, which have been increasing steadily over time at all three stations. No correlation was found between monthly mean specific conductance and monthly mean streamflow or base flow. Statistically significant upward trends in pH were determined for all three stations. Statistically significant upward trends in stream temperature were determined for East Branch Brandywine Creek below Downingtown, Pa. (01480870) and Brandywine Creek at Chadds Ford, Pa. (01481000). The stream water-quality data indicate substantial increases in the minimum daily dissolved oxygen concentrations in the Brandywine Creek over time. The Chester County Index of Biotic Integrity (CC-IBI) determined for 1998‒2013 was evaluated for the five biological sampling sites collocated with streamgages. CC-IBI scores are based on a 0‒100 scale with higher scores indicating better stream quality. Statistically significant upward trends in the CC-IBI were determined for West Branch Brandywine Creek at Modena, Pa. (01480617) and East Branch Brandywine Creek below Downingtown, Pa. (01480870). No correlation was found between the CC-IBI and streamflow, precipitation, or stream specific conductance, pH, temperature, or dissolved oxygen concentration. A Chester County average water budget was developed using the nine estimated watershed water budgets. Average precipitation was 48.4 inches, and average streamflow was 21.4 inches. Average runoff and base flow were 8.3 and 13.1 inches, respectively, and average evapotranspiration and estimation of errors was 27.2 inches."

Pennsylvania↗

USGS2005

Bioassessment of fish communities of the upper Delaware River

We assessed the biotic integrity of the middle-to-upper Delaware River. We sampled fish and assembled water quality data for eight stations and three habitat types (pool, riffle, and submerged aquatic vegetation [SAV]) of the Delaware River and applied an existing index of biotic integrity (IBI) recently developed for the northern mid-Atlantic slope drainages. We used Spearman's correlation to test IBI scores against measures of water quality (WQI) and cultural pollution. IBI scores were not significantly correlated with WQI, but were significantly negatively correlated with sewage load of adjacent tributaries (rs = -0.647, p = 0.08). Sites ranged from good to fair in biotic integrity. Fish assemblage composition from all three habitat types was necessary in order to accurately characterize biotic integrity. Of the three habitat types, fish assemblages from SAV habitats had the greatest positive effect on biotic integrity. Continued application of the IBI may be useful as a long-term monitoring tool as this river corridor becomes increasingly urbanized.

Northeastern Naturalist↗

USGS1992

Contribution of fish community metrics to the index of biotic integrity in two Ozark rivers

Flow regime, energy source, water quality, and habitat structure within stream systems play major roles in controlling the structure of resident fish communities (Gorman and Karr, 1978; Karr and Dudley, 1981; Schlosser, 1982). Based on the hypothesis that there are predictable relationships between stream variables and fish community structure, overall stream condition has been assessed using indices such as the Index of Biotic Integrity (IBI) (Karr, 1981; Karr et al., 1986). The IBI integrates a wide range of information pertaining to fish community structure that reflects the prevailing chemical, physical, and biological condition of the stream. Assessments made using the IBI have been correlated to actual stream conditions and appear to be sensitive to a wide range of environmental degradation (Fausch et al., 1990).

Ecological Indicators↗

USGS2026

Long-term predictive modeling of stream condition suggests wide-spread changes within the Chesapeake Bay Watershed, USA

Stream ecosystems worldwide face ongoing degradation, underscoring the urgent need for conservation and restoration. Regional analyses of stream condition have been limited by sparse spatial and temporal data, particularly at long time scales. To address this gap, we used observed data to predict annual biological condition for 360,893 small, nontidal stream reaches in the Chesapeake Bay watershed from 1985 to 2023 (39 years). Predictions were generated using random forest models trained on extensive benthic macroinvertebrate data sets and predictors including natural landscape features, land cover, and climate variables. Four biological metrics were assessed: percent Ephemeroptera, Plecoptera, and Trichoptera excluding Hydropsychidae (EPT-H), percent Ephemeroptera, percent clinger functional group, and the Index of Biological Integrity (IBI). Results revealed degraded biological conditions near Washington, D.C. and Baltimore, Maryland, with declining trends across all metrics in these urbanized areas. Spatial heterogeneity was evident: IBI and clinger percentages increased in many southern streams but declined in northern streams, whereas EPT-H and Ephemeroptera decreased watershed wide except in the Southeastern Plains bioregion. By 2021, watershed wide IBI improvements were predicted for 0.9–1.1% of stream length, falling short of management goals. This study demonstrates the utility of long-term data and machine learning for predicting stream condition, identifying key stressors, and guiding restoration and conservation site selection.

Delaware, Maryland, New York, Pennsylvania, Virgin↗

USGS2005

Nitrogen controls on ecosystem carbon sequestration: a model implementation and application to Saskatchewan, Canada

A plant–soil nitrogen (N) cycling model was developed and incorporated into the Integrated BIosphere Simulator (IBIS) of Foley et al. [Foley, J.A., Prentice, I.C., Ramankutty, N., Levis, S., Pollard, D., Sitch, S., Haxeltine, A., 1996. An integrated biosphere model of land surface process, terrestrial carbon balance and vegetation dynamics. Global Biogeochem. Cycles 10, 603–628]. In the N-model, soil mineral N regulates ecosystem carbon (C) fluxes and ecosystem C:N ratios. Net primary productivity (NPP) is controlled by feedbacks from both leaf C:N and soil mineral N. Leaf C:N determines the foliar and canopy photosynthesis rates, while soil mineral N determines the N availability for plant growth and the efficiency of biomass construction. Nitrogen controls on the decomposition of soil organic matter (SOM) are implemented through N immobilization and mineralization separately. The model allows greater SOM mineralization at lower mineral N, and conversely, allows greater N immobilization at higher mineral N. The model's seasonal and inter-annual behaviours are demonstrated. A regional simulation for Saskatchewan, Canada, was performed for the period 1851–2000 at a 10 km × 10 km resolution. Simulated NPP was compared with high-resolution (1 km × 1 km) NPP estimated from remote sensing data using the boreal ecosystem productivity simulator (BEPS) [Liu, J., Chen, J.M., Cihlar, J., Park, W.M., 1997. A process-based boreal ecosystem productivity simulator using remote sensing inputs. Remote Sens. Environ. 44, 81–87]. The agreement between IBIS and BEPS, particularly in NPP spatial variation, was considerably improved when the N controls were introduced into IBIS.

Ecological Modelling↗