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USGS2008

Ground-water quality data in the southeast San Joaquin Valley, 2005–2006— Results from the California GAMA program

Ground-water quality in the approximately 3,800 square-mile Southeast San Joaquin Valley study unit (SESJ) was investigated from October 2005 through February 2006 as part of the Priority Basin Assessment Project of Ground-Water Ambient Monitoring and Assessment (GAMA) Program. The GAMA Statewide Basin Assessment project was developed in response to the Ground-Water Quality Monitoring Act of 2001 and is being conducted by the California State Water Resources Control Board (SWRCB) in collaboration with the U.S. Geological Survey (USGS) and the Lawrence Livermore National Laboratory (LLNL). The SESJ study was designed to provide a spatially unbiased assessment of raw ground-water quality within SESJ, as well as a statistically consistent basis for comparing water quality throughout California. Samples were collected from 99 wells in Fresno, Tulare, and Kings Counties, 83 of which were selected using a spatially distributed, randomized grid-based method to provide statistical representation of the study area (grid wells), and 16 of which were sampled to evaluate changes in water chemistry along ground-water flow paths or across alluvial fans (understanding wells). The ground-water samples were analyzed for a large number of synthetic organic constituents (volatile organic compounds [VOCs], pesticides and pesticide degradates, and pharmaceutical compounds), constituents of special interest (perchlorate, N-nitrosodimethylamine, and 1,2,3-trichloropropane), naturally occurring inorganic constituents (nutrients, major and minor ions, and trace elements), radioactive constituents, and microbial indicators. Naturally occurring isotopes (tritium, and carbon-14, and stable isotopes of hydrogen, oxygen, nitrogen, and carbon), and dissolved noble gases also were measured to help identify the source and age of the sampled ground water. Quality-control samples (blanks, replicates, samples for matrix spikes) were collected at approximately 10 percent of the wells, and the results for these samples were used to evaluate the quality of the data for the ground-water samples. Assessment of the quality-control data resulted in censoring of less than 1 percent of the detections of constituents measured in ground-water samples. This study did not attempt to evaluate the quality of drinking water delivered to consumers; after withdrawal from the ground, water typically is treated, disinfected, and (or) blended with other waters to maintain acceptable drinking-water quality. Regulatory thresholds apply to the treated water that is served to the consumer, not to raw ground water. However, to provide some context for the results, concentrations of constituents measured in the raw ground water were compared with regulatory and other health-based thresholds established by the U.S. Environmental Protection Agency and California Department of Public Health (CDPH) and thresholds established for aesthetic concerns by CDPH. Two VOCs were detected above health-based thresholds: 1,2-dibromo-3-chloropropane (DBCP), and benzene. DBCP was detected above the U.S. Environmental Protections Agency’s maximum contaminant level (MCL-US) in three grid wells and five understanding wells. Benzene was detected above the CDPH’s maximum contaminant level (MCL-CA) in one grid well. All pesticide detections were below health-based thresholds. Perchlorate was detected above its maximum contaminate level for California in one grid well. Nitrate was detected above the MCL-US in six samples from understanding wells, of which one was a public supply well. Two trace elements were detected above MCLs-US: arsenic and uranium. Arsenic was detected above the MCL-US in four grid wells and two understanding wells; uranium was detected above the MCL-US in one grid well and one understanding well. Gross alpha radiation was detected above MCLs-US in five samples; four of them understanding wells, and uranium isotope activity was greater than the MCL-US for one understanding well. Radon-222 was detected above the proposed MCL-US in all wells sampled. Total coliforms were detected in two wells and somatic coliphage was detected in one well.

California↗

USGS1999

Cruise report for O1-99-SC Southern California Earthquake Hazards project

The focus of the Southern California Earthquake Hazards project is to identify the landslide and earthquake hazards and related ground-deformation processes occurring in the offshore areas that have significant potential to impact the inhabitants of the Southern California coastal region. The project activity is supported through the Coastal and Marine Geology Program of the Geologic Division of the U. S. Geological Survey (USGS) and is a component of the Geologic Division's Science Strategy under Goal 1—Conduct Geologic Hazard Assessments for Mitigation Planning (Bohlen et al., 1998). The project research is specifically stated under Activity 1.1.2 of the Science Strategy: Earthquake Hazard Assessments and Loss Reduction Products in Urban Regions. This activity involves "research, seismic and geodetic monitoring, field studies, geologic mapping, and analyses needed to provide seismic hazard assessments of major urban centers in earthquake-prone regions including adjoining coastal and offshore areas." The southern California urban areas, which form the most populated urban corridor along the U.S. Pacific margin, are among a few specifically designated for special emphasis under the Division's science strategy (Bohlen et al., 1998). The primary objective of the project is to help mitigate the earthquake hazards for the Southern California region by improving our understanding of how deformation is distributed (spatially and temporally) in the offshore with respect to the onshore region. To meet this objective, we are conducting field investigations to observe the distribution, character, and relative intensity of active (i.e., primarily Holocene) deformation within the basins and along the shelf adjacent to the most highly populated areas (Fig. 1). In addition, acoustic imaging should help determine the subsurface dimensions of the faults and identify the size and frequency of submarine landslides, both of which are necessary for evaluating the potential for generating destructive tsunamis in the southern California offshore. In order to evaluate the strain associated with the offshore structures, the initial results from the field mapping under this project will be used to identify possible sites for deployment of acoustic geodetic instruments to monitor strain in the offshore region. A major goal of mapping under this project is to provide detailed geologic and geophysical information in GIS data bases that build on the earlier studies and use the new data to precisely locate active faults and to map recent submarine landslide deposits.

California↗

USGS2016

Calorific value and compositional ultimate analysis with a case study of a Texas lignite

Measurements to determine coal quality as fuel include proximate analysis, ultimate analysis and calorific value. The latter is an attribute taking non-negative real values, so a simple transformation is sufficient for its spatial modeling applying geostatistics. The analyses, however, involve proportions that follow the properties of compositional data, thus requiring special preprocessing for an adequate modeling already described in a previous publication for the case of proximate analysis data. 1 Here we model the results of calorific value and ultimate analysis. We propose to use two different binary partitions, one per analysis, map the corresponding isometric logratio transformations, and backtransform the results. The methodology is illustrated using the same coal bed in the previous paper modeling proximate analysis data. Results are summarized using probability maps that, in the case of this deposit, show a prominent channel crossing the deposit and separating the best quality coal from that of lower quality.

International Journal of Coal Geology↗

USGS2012

A review of the regional geophysics of the Arizona Transition Zone

A review of existing geophysical information and new data presented in this special section indicate that major changes in crustal properties between the Basin and Range and Colorado Plateau occur in, or directly adjacent to, the region defined as the Arizona Transition Zone. Although this region was designated on a physiographic basis, studies indicate that it is also the geophysical transition between adjoining provinces. The Transition Zone displays anomalous crustal and upper mantle seismic properties, shallow Curie isotherms, high heat flow, and steep down-to-the-plateau Bouguer gravity gradients. Seismic and gravity studies suggest that the change in crustal thickness, from thin crust in the Basin and Range to thick crust in the Colorado Plateau, may occur as a series of steps rather than a planar surface. Anomalous P wave velocities, high heat flow, shallow Curie isotherms, and results of gravity modeling suggest that the upper mantle is heterogeneous in this region. A relatively shallow asthenosphere beneath the Basin and Range and Transition Zone contrasted with a thick lithosphere beneath the Colorado Plateau would be one explanation that would satisfy these geophysical observations.

Journal of Geophysical Research↗

USGS2000

Strong motion from surface waves in deep sedimentary basins

It is widely recognized that long-period surface waves generated by conversion of body waves at the boundaries of deep sedimentary basins make an important contribution to strong ground motion. The factors controlling the amplitude of such motion, however, are not widely understood. A study of pseudovelocity response spectra of strong-motion records from the Los Angeles Basin shows that late-arriving surface waves with group velocities of about 1 km/sec dominate the ground motion for periods of 3 sec and longer. The rate of amplitude decay for these waves is less than for the body waves and depends significantly on period, with smaller decay for longer periods. The amplitude can be modeled by the equation log y = f(M, RE) + c + bRB where y is the pseudovelocity response, f(M, RE) is an attenuation relation based on a general strong-motion data set, M is moment magnitude, RE is the distance from the source to the edge of the basin, RB is the distance from the edge of the basin to the recording site, and b and c are parameters fit to the data. The equation gives values larger by as much as a factor of 3 than given by the attenuation relationships based on general strong-motion data sets for the same source-site distance. It is clear that surface waves need to be taken into account in the design of long-period structures in deep sedimentary basins. The ground-motion levels specified by the earthquake provisions of current building codes, in California at least, accommodate the long-period ground motions from basin-edge-generated surface waves for periods of 5 sec and less and earthquakes with moment magnitudes of 7.5 or less located more than 20 km outside the basin. There may be problems at longer periods and for earthquakes located closer to the basin edge. The results of this study suggest that anelastic attenuation may need to be included in attempts to model long-period motion in deep sedimentary basins. To obtain better data on surface waves in the future, operators of strong-motion networks should take special care for the faithful recording of the long-period components of ground motion. It will also be necessary to insure that at least some selected recorders, once triggered, continue to operate for a time sufficient for the surface waves to traverse the basin. With velocities of about 1 km/sec, that time will be as long as 100 sec for a basin the size of the Los Angeles Basin.

Bulletin of the Seismological Society of America↗

USGS2021

Groundwater-quality and select quality-control data from the National Water-Quality Assessment Project, January 2017 through December 2019

Groundwater-quality environmental data were collected from 983 wells as part of the National Water-Quality Assessment Project of the U.S. Geological Survey National Water Quality Program and are included in this report. The data were collected from six types of well networks: principal aquifer study networks, which are used to assess the quality of groundwater used for public water supply; land-use study networks, which are used to assess land-use effects on shallow groundwater quality; major aquifer study networks, which are used to assess the quality of groundwater used for domestic supply; enhanced trends networks, which are used to evaluate the time scales during which groundwater quality changes; vertical flow-path study networks, which are used to evaluate changes in groundwater quality from shallow to deeper depths; and modeling support studies, which are used to provide data to support groundwater modeling. Groundwater samples were analyzed for many water-quality indicators and constituents, including major ions, nutrients, trace elements, volatile organic compounds, pesticides, radionuclides, microbiological indicators, and some constituents of special interest (arsenic speciation, hexavalent chromium [chromium (VI)], and perchlorate). These groundwater-quality data, along with data from quality-control samples, are tabulated in this report and in an associated data release. Data for microbiological indicators for samples collected in 2016 are included in the companion data release.

Data Series↗

USGS1996

Atlas of the Breeding Birds of Maryland and the District of Columbia

This was the result of a 5-year cooperative study with the Maryland Ornithological Society and the Maryland Department of Natural Resources. Each of Maryland's 1,256 5-km (25 sq km) blocks was surveyed for breeding birds using the standard categories of Possible, Probable, and Confirmed breeding. Special features include: (1) coverage of all blocks instead of a random sample; (2) one-third of the state (including the most rapidly changing counties) was covered in quarterblocks (2.5 km on each side) to facilitate detecting future changes; (3) quantitative sampling (miniroutes) was completed in more than half the blocks; (4) a 2 percent statewide random sample of blocks was searched for about 30 hours each by Patuxent professionals to evaluate efficiency of coverage by the volunteers; (5) besides species maps for 1983-87, the atlas also includes distribution maps from the 1950s; (6) life history data are based largely on unpublished Maryland information.

Book↗

USGS2012

A review of the key genetic tools to assist imperiled species conservation: analyzing West Indian manatee populations

Managers faced with decisions on threatened and endangered wildlife populations often are lacking detailed information about the species of concern. Integration of genetic applications will provide management teams with a better ability to assess and monitor recovery efforts on imperiled species. The field of molecular biology continues to progress rapidly and many tools are currently available. Presently, little guidance is available to assist researchers and managers with the appropriate selection of genetic tools to study the status of wild manatee populations. We discuss several genetic tools currently employed in the application of conservation genetics, and address the utility of using these tools to determine population status to aid in conservation efforts. As an example, special emphasis is focused on the endangered West Indian manatee (Order Sirenia). All four extant species of sirenians are imperiled throughout their range, predominately due to anthropogenic sources; therefore, the need for genetic information on their population status is direly needed.

Journal of Marine Animals and Their Ecology↗

USGS2009

Groundwater-quality data in the Antelope Valley study unit, 2008: Results from the California GAMA Program

Groundwater quality in the approximately 1,600 square-mile Antelope Valley study unit (ANT) was investigated from January to April 2008 as part of the Priority Basin Project of the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The GAMA Priority Basin Project was developed in response to the Groundwater Quality Monitoring Act of 2001, and is being conducted by the U.S. Geological Survey (USGS) in cooperation with the California State Water Resources Control Board (SWRCB). The study was designed to provide a spatially unbiased assessment of the quality of raw groundwater used for public water supplies within ANT, and to facilitate statistically consistent comparisons of groundwater quality throughout California. Samples were collected from 57 wells in Kern, Los Angeles, and San Bernardino Counties. Fifty-six of the wells were selected using a spatially distributed, randomized, grid-based method to provide statistical representation of the study area (grid wells), and one additional well was selected to aid in evaluation of specific water-quality issues (understanding well). The groundwater samples were analyzed for a large number of organic constituents (volatile organic compounds [VOCs], gasoline additives and degradates, pesticides and pesticide degradates, fumigants, and pharmaceutical compounds), constituents of special interest (perchlorate, N-nitrosodimethylamine [NDMA], and 1,2,3-trichloropropane [1,2,3-TCP]), naturally occurring inorganic constituents (nutrients, major and minor ions, and trace elements), and radioactive constituents (gross alpha and gross beta radioactivity, radium isotopes, and radon-222). Naturally occurring isotopes (strontium, tritium, and carbon-14, and stable isotopes of hydrogen and oxygen in water), and dissolved noble gases also were measured to help identify the sources and ages of the sampled groundwater. In total, 239 constituents and water-quality indicators (field parameters) were investigated. Quality-control samples (blanks, replicates, and samples for matrix spikes) were collected at 12 percent of the wells, and the results for these samples were used to evaluate the quality of the data for the groundwater samples. Field blanks rarely contained detectable concentrations of any constituent, suggesting that contamination was not a noticeable source of bias in the data for the groundwater samples. Differences between replicate samples generally were within acceptable ranges, indicating acceptably low variability. Matrix spike recoveries were within acceptable ranges for most compoundsThis study did not evaluate the quality of water delivered to consumers; after withdrawal from the ground, water typically is treated, disinfected, or blended with other waters to maintain water quality. Regulatory thresholds apply to water that is served to the consumer, not to raw groundwater. However, to provide some context for the results, concentrations of constituents measured in the raw groundwater were compared with regulatory and non-regulatory health-based thresholds established by the U.S. Environmental Protection Agency (USEPA) and California Department of Public Health (CDPH) and thresholds established for aesthetic concerns (secondary maximum contaminant levels, SMCL-CA) by CDPH. Comparisons between data collected for this study and drinking-water thresholds are for illustrative purposes only, and are not indicative of compliance or non-compliance with drinking water standards. Most constituents that were detected in groundwater samples were found at concentrations below drinking-water thresholds. Volatile organic compounds (VOCs) were detected in about one-half of the samples and pesticides detected in about one-third of the samples; all detections of these constituents were below health-based thresholds. Most detections of trace elements and nutrients in samples from ANT wells were below health-based thresholds. Exceptions include: one detection of nitrite plus nitrate as nitrogen (NO 2 +NO 3 ) above the USEPA maximum contaminant level (MCL-US: 10 mg/L), five detections of arsenic above the MCL-US (6 μg/L), one detection of boron above the CDPH notification level (NL-CA: 1,000 μg/L), and two detections of vanadium above the NL-CA (50 μg/L). Most detections of radioactive constituents were below health-based thresholds. Exceptions include two detections of gross alpha radioactivity (72-hour and 30-day counts) above the MCL-US (15 pCi/L). Also, radon-222 was detected above the proposed MCL-US (300 pCi/L) in 14 grid wells and the understanding well, but no wells had detections above the proposed alternative MCL-US (4,000 pCi/L). Most of the samples from ANT wells had concentrations of major elements, total dissolved solids (TDS), and trace elements below the non-enforceable thresholds set for aesthetic concerns. Three samples contained sulfate and four samples contained total dissolved solids at concentrations above the SMCL-CA thresholds (250 mg/L and 500 mg/L, respectively). Two of the total dissolved solids detections were above the upper SMCL-CA (1,000 mg/L). Samples from four wells had field pH values above the SMCL-US (>pH 8.5). Field-measured specific conductance values were above the SMCL-CA (900 μS/cm at 25°C) at eight wells with four of these measurements above the upper SMCL-CA threshold (1,600 μS/cm at 25°C).

California↗

USGS2024

The underlying causes of differential migration: Assumptions, hypotheses, and predictions

Mechanisms governing the migratory decisions of birds have long fascinated ecologists and sparked considerable debate. Identifying factors responsible for variation in migration distance, also known as differential migration, has been a popular approach to understanding the mechanisms underlying migratory behaviour more generally. However, research progress has been slowed by the continued testing of overlapping, non-mechanistic, and circular predictions among a small set of historically entrenched hypotheses. We highlight the body size hypothesis and suggest that the predictions commonly tested have impeded progress because body size relationships with migration distance are predictions made by several distinct hypotheses with contrasting mechanisms. The cost of migration itself has not been adequately accounted for in most hypotheses, and we propose two flight efficiency hypotheses with time- and energy-minimizing mechanisms that allow individuals to mitigate the risks inherent to longer migrations. We also advance two conceptual versions of the social dominance hypothesis based on two distinct underlying mechanisms related to distance minimization and food maximization that will help clarify the role of competition in driving migratory decisions. Overall, we describe and refine 12 mechanistic hypotheses proposed to explain differential migration (along with several other special-case hypotheses), seven of which have underlying mechanisms related to food limitation as past research has identified this to be an important driver of differential migration. We also thoroughly reviewed 145 publications to assess the amount of support for 10 critical assumptions underlying alternative hypotheses for differential migration in birds. Our review reveals that surprisingly few studies explicitly evaluate assumptions within a differential migration context. Generating and testing strong predictions and critical assumptions underlying mechanisms of alternative hypotheses will improve our ability to differentiate among these explanations of differential migration. Additionally, future intraspecific progress will be greatest if investigators continue to focus on mechanisms underlying variation in migration distance within rather than among demographic classes, as previous research has found differing mechanisms to be responsible for differential migration among demographic classes. Interspecifically, a thorough comparative analysis that seeks to explain variation in migration distance among species would broaden both our understanding of the mechanisms regulating current differential migration patterns and those that led to the evolution of migration more generally. Collectively, we provide a framework that, together with advances in animal-borne tracking and other technology, can be used to advance our understanding of the causes of differential migration distance, and migratory decisions more generally.

Biological Reviews↗

USGS2013

Status and understanding of groundwater quality in the Madera, Chowchilla Study Unit, 2008: California GAMA Priority Basin Project

Groundwater quality in the approximately 860-square-mile Madera and Chowchilla Subbasins (Madera-Chowchilla study unit) of the San Joaquin Valley Basin was investigated as part of the Priority Basin Project of the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The study unit is located in California's Central Valley region in parts of Madera, Merced, and Fresno Counties. The GAMA Priority Basin Project is being conducted by the California State Water Resources Control Board in collaboration with the U.S. Geological Survey (USGS) and the Lawrence Livermore National Laboratory. The Project was designed to provide statistically robust assessments of untreated groundwater quality within the primary aquifer systems in California. The primary aquifer system within each study unit is defined by the depth of the perforated or open intervals of the wells listed in the California Department of Public Health (CDPH) database of wells used for municipal and community drinking-water supply. The quality of groundwater in shallower or deeper water-bearing zones may differ from that in the primary aquifer system; shallower groundwater may be more vulnerable to contamination from the surface. The assessments for the Madera-Chowchilla study unit were based on water-quality and ancillary data collected by the USGS from 35 wells during April-May 2008 and water-quality data reported in the CDPH database. Two types of assessments were made: (1) status , assessment of the current quality of the groundwater resource, and (2) understanding , identification of natural factors and human activities affecting groundwater quality. The primary aquifer system is represented by the grid wells, of which 90 percent (%) had depths that ranged from about 200 to 800 feet (ft) below land surface and had depths to the top of perforations that ranged from about 140 to 400 ft below land surface. Relative-concentrations (sample concentrations divided by benchmark concentrations) were used for evaluating groundwater quality for those constituents that have Federal or California regulatory or non-regulatory benchmarks for drinking-water quality. A relative-concentration (RC) greater than 1.0 indicates a concentration above a benchmark. RCs for organic constituents (volatile organic compounds and pesticides) and special-interest constituents (perchlorate) were classified as "high" (RC is greater than 1.0), "moderate" (RC is less than or equal to 1.0 and greater than 0.1), or "low" (RC is less than or equal to 0.1). For inorganic constituents (major and minor ions, trace elements, nutrients, and radioactive constituents), the boundary between low and moderate RCs was set at 0.5. The assessments characterize untreated groundwater quality, not the quality of treated drinking water delivered to consumers by water purveyors; drinking-water benchmarks, and thus relative-concentrations, are used to provide context for the concentrations of constituents measured in groundwater. Aquifer-scale proportion was used in the status assessment as the primary metric for evaluating regional-scale groundwater quality. High aquifer-scale proportion is defined as the percentage of the area of the primary aquifer system with RCs greater than 1.0 for a particular constituent or class of constituents; moderate and low aquifer-scale proportions are defined as the percentages of the area of the primary aquifer system with moderate and low RCs, respectively. Percentages are based on an areal, rather than a volumetric basis. Two statistical approaches--grid-based, which used one value per grid cell, and spatially weighted, which used multiple values per grid cell--were used to calculate aquifer-scale proportions for individual constituents and classes of constituents. The spatially weighted estimates of high aquifer-scale proportions were within the 90% confidence intervals of the grid-based estimates for all constituents except iron. The status assessment showed that inorganic constituents had greater high and moderate aquifer-scale proportions in the Madera-Chowchilla study unit than did organic constituents. RCs for inorganic constituents with health-based benchmarks were high in 37% of the primary aquifer system, moderate in 30%, and low in 33%. The inorganic constituents contributing most to the high aquifer-scale proportion were arsenic (13%), uranium (17%), gross alpha particle activity (20%), nitrate (6.7%), and vanadium (3.3%). RCs for inorganic constituents with non-health-based benchmarks were high in 6.7% of the primary aquifer system, and the constituent contributing most to the high aquifer-scale proportion was total dissolved solids (TDS). RCs for organic constituents with health-based benchmarks were high in 10% of the primary aquifer system, moderate in 3.3%, and low in 40%; organic constituents were not detected in 47% of the primary aquifer system. The fumigant 1,2-dibromo-3-chloropropane (DBCP) was the only organic constituent detected at high RCs. Seven organic constituents were detected in 10% or more of the primary aquifer system: DBCP; the fumigant additive 1,2,3-trichloropropane; the herbicides simazine, atrazine, and diuron; the trihalomethane chloroform; and the solvent tetrachloroethene (PCE). RCs for the special-interest constituent perchlorate were moderate in 20% of the primary aquifer system. The second component of this study, the understanding assessment , identified the natural and human factors that may affect groundwater quality by evaluating statistical correlations between water-quality constituents and potential explanatory factors, such as land use, position relative to important geologic features, groundwater age, well depth, and geochemical conditions in the aquifer. Results of the statistical evaluations were used to explain the distribution of constituents in the study unit. Depth to the top of perforations in the well and groundwater age were the most important explanatory factors for many constituents. High and moderate RCs of nitrate, uranium, and TDS and the presence of herbicides, trihalomethanes, and solvents were all associated with depths to the top of perforations less than 235 ft and modern- and mixed-age groundwater. Positive correlations between uranium, bicarbonate, TDS, and the proportion of calcium and magnesium in the total cations suggest that downward movement of recharge from irrigation water contributed to the elevated concentrations of these constituents in the primary aquifer system. High and moderate RCs of arsenic were associated with depths to the top of perforations greater than 235 ft, mixed- and pre-modern-age groundwater, and location in sediments from the Chowchilla River alluvial fan, suggesting that increased residence time and appropriate aquifer materials were needed for arsenic to accumulate in the groundwater. High and moderate RCs of fumigants were associated with depths to the top of perforations of less than 235 ft and location south of the city of Madera; low RCs of fumigants were detected in wells dispersed across the study unit with a range of depths to top of perforations.

California↗

USGS2005

Palynology in coal systems analysis-The key to floras, climate, and stratigraphy of coal-forming environments

Palynology can be effectively used in coal systems analysis to understand the nature of ancient coal-forming peat mires. Pollen and spores preserved in coal effectively reveal the floristic composition of mires, which differed substantially through geologic time, and contribute to determination of depositional environment and paleo- climate. Such applications are most effective when integrated with paleobotanical and coal-petrographic data. Examples of previous studies of Miocene, Carboniferous, and Paleogene coal beds illustrate the methods and results. Palynological age determinations and correlations of deposits are also important in coal systems analysis to establish stratigraphic setting. Application to studies of coalbed methane generation shows potential because certain kinds of pollen are associated with gas-prone lithotypes. ??2005 Geological Society of America.

Special Paper of the Geological Society of America↗

USGS2007

High-resolution sequence stratigraphy of lower Paleozoic sheet sandstones in central North America: The role of special conditions of cratonic interiors in development of stratal architecture

Well-known difficulties in applying sequence stratigraphic concepts to deposits that accumulated across slowly subsiding cratonic interior regions have limited our ability to interpret the history of continental-scale tectonism, oceanographic dynamics of epeiric seas, and eustasy. We used a multi-disciplinary approach to construct a high-resolution stratigraphic framework for lower Paleozoic strata in the cratonic interior of North America. Within this framework, these strata proved readily amenable to modern sequence stratigraphic techniques that were formulated based on successions along passive margins and in foreland basins, settings markedly different from the cratonic interior. Parasequences, parasequence stacking patterns, systems tracts, maximum flooding intervals, and sequence-bounding unconformities can be confidently recognized in the cratonic interior using mostly standard criteria for identification. The similarity of cratonic interior and foreland basin successions in size, geometry, constituent facies, and local stacking patterns of nearshore parasequences is especially striking. This similarity indicates that the fundamental processes that establish shoreface morphology and determine the stratal expression of retreat and progradation were likewise generally the same, despite marked differences in tectonism, physiography, and bathymetry between the two settings. Our results do not support the widespread perception that Paleozoic cratonic interior successions are so anomalous in stratal geometries, and constitute such a poor record of time, that they are poorly suited for modern sequence stratigraphic analyses. The particular arrangement of stratal elements in the cratonic interior succession we studied is no more anomalous or enigmatic than the variability in architecture that sets all sedimentary successions apart from one another. Thus, Paleozoic strata of the cratonic interior are most appropriately considered as a package that belongs in a continuum of variable stratigraphic packages reflecting variable controls such as subsidence and shelf physiography. Special conditions of exceptionally slow subsidence rate, shallow bathymetry, and nearly flat regional shelf gradient are manifest mostly by the presence of individual systems tracts of relatively long duration that extend for much greater distances across depositional strike than those that characterize successions deposited in more dynamic tectonic and physiographic settings. These results suggest that if other cratonic interior successions are as anomalous as reported, a low sediment supply may have played a primary role in development of their apparently condensed stratal architecture. The results also lead us to suggest that a nonvegetated lower Paleozoic landscape played a relatively insignificant role in the development of what are commonly perceived to be enigmatic stratigraphic features of sheet sandstones, particularly their widespread yet thin geometry, and a scarcity of shale and siltstone. ?? 2007 Geological Society of America.

Geological Society of America Bulletin↗

USGS2024

Invertebrate trophic structure on marine ferromanganese and phosphorite hardgrounds

The Southern California Borderland hosts a variety of geologic and oceanographic features that allow for diverse habitats to occur in a restricted region with a strong oxygen minimum zone (OMZ) and hard substrates. These include ferromanganese (FeMn) crusts and phosphorites targeted for deep-seabed mining in other regions. Baseline studies regarding hardground macro- (> 0.3 mm) and megafaunal (> 2 cm) invertebrates are lacking, although they contribute to understanding nutrient cycling and resilience of deep-sea communities to ocean deoxygenation, fishing, or mineral extraction. With the goal of understanding how substrate type, depth, and dissolved oxygen concentration influence invertebrate trophic structure, we surveyed δ 13 C and δ 15 N values of invertebrates on hard substrates on the Southern California Borderland margin along a depth gradient (120–2400 m) through the OMZ at inshore (< 100 km from shore) and offshore (100–250 km from shore) sites, using generalized additive models and community-level metrics. Macrofaunal isotopic values correlate with substrate type, exhibiting higher trophic diversity on FeMn crusts and specialized communities on phosphorites. Megafaunal isotopic values correlate with proximity to shore; animals offshore seem to depend more on phytoplanktonic production than animals inshore. In general, δ 15 N increased with decreasing dissolved oxygen and increasing depth, possibly due to remineralization processes within the OMZ and with depth. We discuss how feeding modes and community composition might influence the observed patterns. This study elucidates the importance of the environmental context in shaping invertebrate trophic structure on continental margins and provides baseline knowledge that may be useful in regions where these minerals are targeted for extraction.

Limnology and Oceanography↗

USGS2011

Status and understanding of groundwater quality in the Monterey Bay and Salinas Valley Basins, 2005-California GAMA Priority Basin Project

Groundwater quality in the approximately 1,000 square mile (2,590 km2) Monterey Bay and Salinas Valley Basins (MS) study unit was investigated as part of the Priority Basin Project of the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The study unit is located in central California in Monterey, Santa Cruz, and San Luis Obispo Counties. The GAMA Priority Basin Project is being conducted by the California State Water Resources Control Board in collaboration with the U.S. Geological Survey (USGS) and the Lawrence Livermore National Laboratory. The GAMA MS study was designed to provide a spatially unbiased assessment of the quality of untreated (raw) groundwater in the primary aquifer systems (hereinafter referred to as primary aquifers). The assessment is based on water-quality and ancillary data collected in 2005 by the USGS from 97 wells and on water-quality data from the California Department of Public Health (CDPH) database. The primary aquifers were defined by the depth intervals of the wells listed in the CDPH database for the MS study unit. The quality of groundwater in the primary aquifers may be different from that in the shallower or deeper water-bearing zones; shallow groundwater may be more vulnerable to surficial contamination. The first component of this study, the status of the current quality of the groundwater resource, was assessed by using data from samples analyzed for volatile organic compounds (VOC), pesticides, and naturally occurring inorganic constituents, such as major ions and trace elements. This status assessment is intended to characterize the quality of groundwater resources in the primary aquifers of the MS study unit, not the treated drinking water delivered to consumers by water purveyors. Relative-concentrations (sample concentration divided by the health- or aesthetic-based benchmark concentration) were used for evaluating groundwater quality for those constituents that have Federal and (or) California regulatory or non-regulatory benchmarks for drinking-water quality. A relative-concentration greater than (>) 1.0 indicates a concentration greater than a benchmark, and less than or equal to (≤) 1.0 indicates a concentration less than or equal to a benchmark. Relative-concentrations of organic and special interest constituents [perchlorate, N-nitrosodimethylamine (NDMA), and 1,2,3-trichloropropane (1,2,3-TCP)], were classified as "high" (relative-concentration > 1.0), "moderate" (0.1 < relative-concentration ≤ 1.0), or "low" (relative-concentration ≤ 0.1). Relative-concentrations of inorganic constituents were classified as "high" (relative-concentration > 1.0), "moderate" (0.5 < relative-concentration ≤ 1.0), or "low" (relative-concentration ≤ 0.5). Aquifer-scale proportion was used as the primary metric in the status assessment for evaluating regional-scale groundwater quality. High aquifer-scale proportion was defined as the percentage of the area of the primary aquifers with a relative-concentration greater than 1.0 for a particular constituent or class of constituents; percentage is based on an areal rather than a volumetric basis. Moderate and low aquifer-scale proportions were defined as the percentage of the primary aquifers with moderate and low relative-concentrations, respectively. Two statistical approaches-grid-based and spatially weighted-were used to evaluate aquifer-scale proportions for individual constituents and classes of constituents. Grid-based and spatially-weighted estimates were comparable in the MS study unit (within 90-percent confidence intervals). Inorganic constituents with human-health benchmarks were detected at high relative-concentrations in 14.5 percent of the primary aquifers, moderate in 35.5 percent, and low in 50.0 percent. High aquifer-scale proportion of inorganic constituents primarily reflected high aquifer-scale proportions of nitrate (7.9 percent), molybdenum (2.9 percent), arsenic (2.8 percent), boron (1.9 percent), and gross alpha-beta radioactivity (1.5 percent). Relative-concentrations of organic constituents (one or more) were high in 0.2 percent, moderate in 6.6 percent, and low in 93.2 percent (not detected in 48.1 percent) of the primary aquifers. The high aquifer-scale proportion of organic constituents primarily reflected high aquifer-scale proportions of tetrachloroethene (0.1 percent) and methyl tert-butyl ether (0.1 percent). Relative-concentration for inorganic constituents with secondary maximum contaminant levels, manganese, total dissolved solids, iron, sulfate, and chloride were high in 18.6, 8.6, 7.1, 2.9, and 1.4 percent of the primary aquifers, respectively. Of the 205 organic and special-interest constituents analyzed, 32 constituents were detected. One organic constituent, the herbicide simazine, was frequently detected (in 10 percent or more of samples), but was detected at low relative-concentrations. The second component of this study, the understanding assessment, identified the natural and human factors that affect groundwater quality by evaluating land use, physical characteristics of the wells, and geochemical conditions of the aquifer. Results from these evaluations were used to explain the occurrence and distribution of constituents in the study unit. The understanding assessment indicated that most wells that contained nitrate were classified as being in agricultural land-use areas, and depths to the top of perforations in most of the wells were less than 350 ft (76 m). High and moderate relative-concentrations of arsenic may be attributed to reductive dissolution of manganese or iron oxides, or to desorption or inhibition of arsenic sorption under alkaline conditions. Arsenic concentrations increased with increasing groundwater depth and residence time (age). Simazine was detected more often in groundwater from wells with surrounding land use classified as agricultural or urban, and with top of perforation depths less than 200 ft (61 m), than in groundwater from wells with natural land use or with deeper depths. Tritium, helium-isotope, and carbon-14 data were used to classify the predominant age of groundwater samples into three categories: modern (water that has entered the aquifer since 1953), pre-modern (water that entered the aquifer prior to 1953 to tens of thousands of years ago), and mixed (mixtures of modern- and pre-modern-age waters). Arsenic concentrations were significantly greater in groundwater with pre-modern age classification than in groundwater with modern-age classification, suggesting that arsenic accumulates with groundwater residence time.

Scientific Investigations Report↗

USGS2021

Among-individual diet variation within a lake trout ecotype: Lack of stability of niche use

In a polyphenic species, differences in resource use are expected among ecotypes, and homogeneity in resource use is expected within an ecotype. Yet, using a broad resource spectrum has been identified as a strategy for fishes living in unproductive northern environments, where food is patchily distributed and ephemeral. We investigated whether specialization of trophic resources by individuals occurred within the generalist piscivore ecotype of lake trout from Great Bear Lake, Canada, reflective of a form of diversity. Four distinct dietary patterns of resource use within this lake trout ecotype were detected from fatty acid composition, with some variation linked to spatial patterns within Great Bear Lake. Feeding habits of different groups within the ecotype were not associated with detectable morphological or genetic differentiation, suggesting that behavioral plasticity caused the trophic differences. A low level of genetic differentiation was detected between exceptionally large-sized individuals and other piscivore individuals. We demonstrated that individual trophic specialization can occur within an ecotype inhabiting a geologically young system (8,000–10,000 yr BP), a lake that sustains high levels of phenotypic diversity of lake trout overall. The characterization of niche use among individuals, as done in this study, is necessary to understand the role that individual variation can play at the beginning of differentiation processes.

Northwest Territories↗

USGS2015

Timescales alter the inferred strength and temporal consistency of intraspecific diet specialization

Many populations consist of individuals that differ substantially in their diets. Quantification of the magnitude and temporal consistency of such intraspecific diet variation is needed to understand its importance, but the extent to which different approaches for doing so reflect instantaneous vs. time-aggregated measures of individual diets may bias inferences. We used direct observations of sea otter individuals ( Enhydra lutris nereis ) to assess how: (1) the timescale of sampling, (2) under-sampling, and (3) the incidence- vs. frequency-based consideration of prey species affect the inferred strength and consistency of intraspecific diet variation. Analyses of feeding observations aggregated over hourly to annual intervals revealed a substantial bias associated with time aggregation that decreases the inferred magnitude of specialization and increases the inferred consistency of individuals’ diets. Time aggregation also made estimates of specialization more sensitive to the consideration of prey frequency, which decreased estimates relative to the use of prey incidence; time aggregation did not affect the extent to which under-sampling contributed to its overestimation. Our analyses demonstrate the importance of studying intraspecific diet variation with an explicit consideration of time and thereby suggest guidelines for future empirical efforts. Failure to consider time will likely produce inconsistent predictions regarding the effects of intraspecific variation on predator–prey interactions.

Oecologia↗

USGS2009

Ground-water quality data in the San Francisco Bay study unit, 2007: Results from the California GAMA Program

Ground-water quality in the approximately 620-square-mile San Francisco Bay study unit (SFBAY) was investigated from April through June 2007 as part of the Priority Basin project of the Ground-Water Ambient Monitoring and Assessment (GAMA) Program. The GAMA Priority Basin project was developed in response to the Groundwater Quality Monitoring Act of 2001, and is being conducted by the U.S. Geological Survey (USGS) in cooperation with the California State Water Resources Control Board (SWRCB). The study was designed to provide a spatially unbiased assessment of raw ground-water quality, as well as a statistically consistent basis for comparing water quality throughout California. Samples in SFBAY were collected from 79 wells in San Francisco, San Mateo, Santa Clara, Alameda, and Contra Costa Counties. Forty-three of the wells sampled were selected using a spatially distributed, randomized grid-based method to provide statistical representation of the study unit (grid wells). Thirty-six wells were sampled to aid in evaluation of specific water-quality issues (understanding wells). The ground-water samples were analyzed for a large number of synthetic organic constituents (volatile organic compounds [VOC], pesticides and pesticide degradates, pharmaceutical compounds, and potential wastewater-indicator compounds), constituents of special interest (perchlorate and N-nitrosodimethylamine [NDMA]), naturally occurring inorganic constituents (nutrients, major and minor ions, trace elements, chloride and bromide isotopes, and uranium and strontium isotopes), radioactive constituents, and microbial indicators. Naturally occurring isotopes (tritium, carbon-14 isotopes, and stable isotopes of hydrogen, oxygen, nitrogen, boron, and carbon), and dissolved noble gases (noble gases were analyzed in collaboration with Lawrence Livermore National Laboratory) also were measured to help identify the source and age of the sampled ground water. Quality-control samples (blank samples, replicate samples, matrix spike samples) were collected for approximately one-third of the wells, and the results for these samples were used to evaluate the quality of the data for the ground-water samples. Assessment of the quality-control information from the field blanks resulted in applying “V” codes to approximately 0.1 percent of the data collected for ground-water samples (meaning a constituent was detected in blanks as well as the corresponding environmental data). See the Appendix section “Quality-Control-Sample Results.” This study did not attempt to evaluate the quality of water delivered to consumers; after withdrawal from the ground, water typically is treated, disinfected, and (or) blended with other waters to maintain acceptable water quality. Regulatory thresholds apply to treated water that is delivered to the consumer, not to raw ground water. However, to provide some context for the results, concentrations of constituents measured in the raw ground water were compared with regulatory and non-regulatory health-based thresholds established by the U.S. Environmental Protection Agency (USEPA) and California Department of Public Health (CDPH) and thresholds established for aesthetic concerns (secondary maximum contaminant levels, SMCL-CA) by CDPH. VOCs were detected in about one-half of the grid wells, while pesticides were detected in about one-fifth of the grid wells. Concentrations of all VOCs and pesticides detected in samples from all SFBAY wells were below health-based thresholds. No pharmaceutical compounds were detected in any SFBAY well. One potential wastewater-indicator compound, caffeine, was detected in one grid well in SFBAY. Concentrations of most trace elements and nutrients detected in samples from all SFBAY wells were below health-based thresholds. Exceptions include nitrate, detected above the USEPA maximum contaminant level (MCL-US) in 3samples; arsenic, above the USEPA maximum contaminant level (MCL-US) in 3 samples; cadmium, above the MCL-US in 1 sample; boron, above the CDPH notification level (NL-CA) in 2 samples; and strontium, above the USEPA lifetime health advisory level (HAL-US) in 2 samples. The radioactive constituent radon-222 was detected above the proposed MCL-US in two grid wells, but no wells had detections above the proposed alternative MCL-US. Most of the samples from all SFBAY wells had concentrations of major ions, total dissolved solids, and trace elements below the non-enforceable thresholds set for aesthetic concerns. Six or fewer samples contained chloride, sulfate, or iron at concentrations above the SMCL-CA thresholds. No microbial indicators were detected in SFBAY grid wells.

California↗