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At least 523 records · Page 29Linked to original sources
USGS2024

Histological analysis of deepwater sculpin ovaries supports single spawning reproductive strategy

Deepwater sculpin ( Myoxocephalus thompsonii ) were considered extirpated from Lake Ontario prior to the 1990s but have since resurged and are now an abundant offshore demersal species. As deepwater sculpin reproduction is poorly described, an investigation of their gonadal development and fecundity was conducted to better understand their reproductive biology. To evaluate spawning period duration and if females spawn multiple times during their spawning period, we compared deepwater sculpin gonadosomatic index (GSI), gonadal development, and fecundity using individuals collected in fall and spring from 2018 to 2021. Our analysis revealed female GSI was greater in fall (8.1 ± 6.2 %) than spring (4.4 ± 4.3 %). Absolute fecundity averaged 763 ± 246 oocytes and relative fecundity averaged 19 ± 6 oocytes per gram of fish. Histological analysis revealed the presence of only one batch of developing oocytes in the ovary (n = 60), indicating group-synchronous ovarian organization. Our findings suggest deepwater sculpin spawn once annually but have a protracted spawning season indicated by prolonged elevated GSI values. Therefore, protracted spawning in deepwater sculpin likely results in an extended period of larval emergence rather than the majority occurring in late spring as previously suggested. A longer timeframe for deepwater sculpin larval emergence may increase reproductive success and contribute to their population’s recovery.

Journal of Great Lakes Research↗
USGS2025

Bacterial community structure across a sand dune chronosequence at the Indiana Dunes National Park

The microbial role in dune succession along the Great Lakes freshwater sand dunes remains poorly understood. A chronosequence study was conducted to understand the relationships among soil bacterial communities, soil chemistry, and prescribed burning at the Indiana Dunes National Park. Soil bacterial communities and chemistry, as well as groundlayer vegetation were sampled during 2015 and 2017 from seven successional stages from the beach (contemporary) to the 14,000-year-old oak forest. Bacterial communities from unburned and burned sites among stages were determined by 16S rRNA gene amplicon sequencing. Soil pH and cations decreased from early (beach, foredune, secondary dune, and woodland transition) to late (oak savanna, woodland, and oak forest) successional stages, while organic matter and organic carbon concentrations increased in the late successional stages. Bacterial alpha diversity showed no significant differences among stages, but a significant interaction was found between stage and prescribed burning (H = 39.7, p < 0.001). Bacterial communities separated mainly along stage by all four beta diversity metrics used (Bray Curtis, Jaccard, and Weighted and Unweighted UniFrac), with the main difference observed along the primary axis (weighted UniFrac, 48 %). Bacterial phyla were differentially abundant in older soil stages compared to beach (ANCOM-BC, q < 0.05); likewise, differential abundances in genera were evident when burned and unburned sites were compared. A Mantel test indicated stronger congruency between the bacterial communities and soil chemistry than between bacterial communities and vegetation. Collectively, soil chemical and microbial parameters along with management practices contribute to dunal successional patterns in the Great Lakes.

Indiana↗
USGS2020

An international code comparison study on coupled thermal, hydrologic and geomechanical processes of natural gas hydrate-bearing sediments

Geologic reservoirs containing gas hydrate occur beneath permafrost environments and within marine continental slope sediments, representing a potentially vast natural gas source. Numerical simulators provide scientists and engineers with tools for understanding how production efficiency depends on the numerous, interdependent (coupled) processes associated with potential production strategies for these gas hydrate reservoirs. Confidence in the modeling and forecasting abilities of these gas hydrate reservoir simulators (GHRSs) grows with successful comparisons against laboratory and field test results, but such results are rare, particularly in natural settings. The hydrate community recognized another approach to building confidence in the GHRS: comparing simulation results between independently developed and executed computer codes on structured problems specifically tailored to the interdependent processes relevant for gas hydrate-bearing systems. The United States Department of Energy, National Energy Technology Laboratory (DOE/NETL), sponsored the first international gas hydrate code comparison study, IGHCCS1, in the early 2000s. IGHCCS1 focused on coupled thermal and hydrologic processes associated with producing gas hydrates from geologic reservoirs via depressurization and thermal stimulation. Subsequently, GHRSs have advanced to model more complex production technologies and incorporate geomechanical processes into the existing framework of coupled thermal and hydrologic modeling. This paper contributes to the validation of these recent GHRS developments by providing results from a second GHRS code comparison study, IGHCCS2, also sponsored by DOE/NETL. IGHCCS2 includes participants from an international collection of universities, research institutes, industry, national laboratories, and national geologic surveys. Study participants developed a series of five benchmark problems principally involving gas hydrate processes with geomechanical components. The five problems range from simple geometries with analytical solutions to a representation of the world’s first offshore production test of methane hydrates, which was conducted with the depressurization method off the coast of Japan. To identify strengths and limitations in the various GHRSs, study participants submitted solutions for the benchmark problems and discussed differing results via teleconferences. The GHRSs evolved over the course of IGHCCS2 as researchers modified their simulators to reflect new insights, lessons learned, and suggested performance enhancements. The five benchmark problems, final sample solutions, and lessons learned that are presented here document the study outcomes and serve as a reference guide for developing and testing gas hydrate reservoir simulators.

Journal of Marine and Petroleum Geology↗
USGS2012

Site response across downtown Santa Cruz, California

Some buildings in Santa Cruz, California, particularly those in the downtown section which is built on a flood plain, were severely damaged by the 17 October 1989 Loma Prieta Earthquake. During an aftershock study conducted in the fortnight following the mainshock, an array of seismographs was deployed across downtown to study the site response of the flood plain. Analyses of the records of eight aftershocks reveal that ground motions of the flood plain are amplified relative to those of crystalline rock sites by factors of 4–8 in the frequency band 2–8 Hz. Both resonance in the whole sedimentary column which overlies the crystalline basement and resonance/broad-band amplification in the low-velocity alluvium of the flood plain contribute to this site response.

California↗
USGS2017

Impact of tile drainage on evapotranspiration in South Dakota, USA, based on high spatiotemporal resolution evapotranspiration time series from a multi-satellite data fusion system

Soil drainage is a widely used agricultural practice in the midwest USA to remove excess soil water to potentially improve the crop yield. Research shows an increasing trend in baseflow and streamflow in the midwest over the last 60 years, which may be related to artificial drainage. Subsurface drainage (i.e., tile) in particular may have strongly contributed to the increase in these flows, because of its extensive use and recent gain in the popularity as a yield-enhancement practice. However, how evapotranspiration (ET) is impacted by tile drainage on a regional level is not well-documented. To explore spatial and temporal ET patterns and their relationship to tile drainage, we applied an energy balance-based multisensor data fusion method to estimate daily 30-m ET over an intensively tile-drained area in South Dakota, USA, from 2005 to 2013. Results suggest that tile drainage slightly decreases the annual cumulative ET, particularly during the early growing season. However, higher mid-season crop water use suppresses the extent of the decrease of the annual cumulative ET that might be anticipated from widespread drainage. The regional water balance analysis during the growing season demonstrates good closure, with the average residual from 2005 to 2012 as low as -3 mm. As an independent check of the simulated ET at the regional scale, the water balance analysis lends additional confidence to the study. The results of this study improve our understanding of the influence of agricultural drainage practices on regional ET, and can affect future decision making regarding tile drainage systems.

IEEE Journal of Selected Topics in Applied Earth O↗
USGS1997

Nest materials as a source of genetic data for avian ecological studies

We examined the utility of feathers and egg shell membranes, deposited in the nests of Spectacled Eiders (Somateria fischeri), as a source of DNA for genetic studies at both the population and individual level. The potential for feather DNA contamination as a result of female behavioral interactions (e.g. nest parasitism), reuse of nest sites from previous years, or other unknown occurrences was acknowledged and specifically tested. DNA was successfully extracted from both feathers and egg shell membranes and waterfowl microsatellite loci were used to construct individual genotypes. We found no difference in the genotypes obtained from nest feathers or blood of the incubating female. Detection of nest feather contamination was possible with as little as one feather when samples from multiple females were intentionally mixed. Triplicate DNA extractions from 33 nests provided a means of detecting contamination in 3 nests. Egg membranes proved a viable source of offspring DNA and can contribute valuable data to investigations of parentage when assayed jointly with maternal feather DNA. Nest materials provide an efficient, non-invasive method of genetic sampling that can be readily incorporated into field research. However, the natural history traits and mating strategies of a species must be considered during sample collection to identify the possible sources of nest materials (e.g., paternal, maternal, parasite, etc.). Specific experiments should also be designed to test sampling assumptions.

Journal of Field Ornithology↗
USGS2015

Fisheries research and monitoring activities of the Lake Erie Biological Station, 2014

In 2014, the USGS LEBS successfully completed large vessel surveys in all three of Lake Erie’s basins. Lake Erie Biological Station’s primary vessel surveys included the Western Basin Forage Fish Assessment and East Harbor Forage Fish Assessment as well as contributing to the cooperative multi-agency Central Basin Hydroacoustics Assessment, the Eastern Basin Coldwater Community Assessment, and LTLA (see FTG, CWTG, and FTG reports, respectively). Results from the surveys contribute to Lake Erie Committee Task Group data needs and analyses of trends in Lake Erie’s fish communities. The cruise survey schedule in 2014 was greatly increased by LEBS’s participation in the Lake Erie CSMI, which consisted of up-to two weeks of additional sampling per month from April to October. CSMI is a bi-national effort that occurs at Lake Erie every five years with the purpose of addressing data and knowledge gaps necessary to management agencies and the Lake Erie LaMP. LEBS deepwater science capabilities also provided a platform for data collection by Lake Erie investigators from multiple agencies and universities including: the USGS GLSC, ODW, KSU, OSU, UM, PU, UT, and the USNRL. Samples from this survey are being processed and a separate report of the findings will be made available in a separate document. Our 2014 vessel operations were initiated in mid-April, as soon after ice-out as possible, and continued into early December. During this time, crews of the R/V Muskie and R/V Bowfin deployed 196 bottom trawls covering 48.5 km of lake-bottom, nearly 6 km of gillnet, collected data from 60 hydroacoustics transects, 285 lower trophic (i.e., zooplankton and benthos) samples, and 330 water quality measures (e.g., temperature profiles, water samples). Thus, 2014 was an intensive year of field activity. Our June and September bottom trawl surveys in the Western Basin were numerically dominated by Emerald Shiner, White Perch, and Yellow Perch; however, Freshwater Drum were dominant by biomass. Age-2+ Yellow Perch and White Perch diets from our western basin trawl had highest occurrences of benthic invertebrates in spring and fall. Hexagenia spp. accounted for >25% of Yellow Perch and White Perch diet composition (dry weight) in spring. We conducted an analysis using data from the past 6 years of our East Harbor survey to determine to what degree our new research vessel and trawl is affecting our ability to detect trends across the 50+ year time series. We also evaluated trends in water temperatue, dissolved oxygen, secchi depth and total Phosphorus from our LTLA sites near Vermilion, Ohio. Within the following report sections, we describe specific results from our primary surveys conducted in 2014.

Report↗
USGS2020

U.S. Geological Survey science in support of the North American Bat Monitoring Program (NABat)

Bats make up one-fifth of all mammalian species worldwide and are found on every continent except Antarctica. They contribute to overall ecosystem health by suppressing pest insects and pollinating plants and spreading seeds. Eight North American bat species are listed as federally endangered or threatened, and more than one-half are of current conservation concern in the United States, Canada, or Mexico. The U.S. Geological Survey (USGS) leads, manages, and coordinates the multinational North American Bat Monitoring Program (NABat) as well as conducts scientific research on bats. USGS and NABat partners help resource managers and policymakers make informed decisions regarding the conservation of bats across North America. USGS science also helps inform decision making with respect to WNS surveillance and bat vulnerability; mitigation of potential impacts of energy development on bats; prelisting conservation efforts for regulatory agencies; and land management practices. Partners are essential to the success of NABat. The data contributed by NABat partners provide baseline knowledge on the distribution and abundance of bats, which is used to evaluate the impacts of the threats to bats across North America. These data are also the foundation for the scientific information used to set conservation priorities and evaluate the effectiveness of management actions.

Fact Sheet↗
USGS2015

Potential for real‐time understanding of coupled hydrologic and biogeochemical processes in stream ecosystems: Future integration of telemetered data with process models for glacial meltwater streams

While continuous monitoring of streamflow and temperature has been common for some time, there is great potential to expand continuous monitoring to include water quality parameters such as nutrients, turbidity, oxygen, and dissolved organic material. In many systems, distinguishing between watershed and stream ecosystem controls can be challenging. The usefulness of such monitoring can be enhanced by the application of quantitative models to interpret observed patterns in real time. Examples are discussed primarily from the glacial meltwater streams of the McMurdo Dry Valleys, Antarctica. Although the Dry Valley landscape is barren of plants, many streams harbor thriving cyanobacterial mats. Whereas a daily cycle of streamflow is controlled by the surface energy balance on the glaciers and the temporal pattern of solar exposure, the daily signal for biogeochemical processes controlling water quality is generated along the stream. These features result in an excellent outdoor laboratory for investigating fundamental ecosystem process and the development and validation of process‐based models. As part of the McMurdo Dry Valleys Long‐Term Ecological Research project, we have conducted field experiments and developed coupled biogeochemical transport models for the role of hyporheic exchange in controlling weathering reactions, microbial nitrogen cycling, and stream temperature regulation. We have adapted modeling approaches from sediment transport to understand mobilization of stream biomass with increasing flows. These models help to elucidate the role of in‐stream processes in systems where watershed processes also contribute to observed patterns, and may serve as a test case for applying real‐time stream ecosystem models.

Water Resources Research↗
USGS2019

U.S. Geological Survey energy and wildlife research annual report for 2019

Access to affordable and reliable energy remains a critical need for people and the economy. To satisfy society’s demand for energy, the United States is expanding access to vast natural resources to produce electricity as well as petroleum and natural gas products. Development of our Nation’s energy resources, however, often conflicts directly with the equally vast fish and wildlife resources, which contribute billions of dollars to the economy through harvest, recreation, and services to humans and agriculture. The effects of energy development on living resources include fragmentation of populations, degradation or loss of habitat, and mortality of birds, bats, fish, and other wildlife interacting with energy generation facilities. Thus, an expanding energy infrastructure results in new requirements for land and ocean conversion for project siting and operational decisions to minimize risk to fish and wildlife resources. U.S. Geological Survey (USGS) scientists partner with more than 150 Federal, State, and local government agencies; Tribal nations; academic institutions; and nongovernmental organizations to deliver timely and relevant information on pressing resource management issues. This report summarizes ongoing USGS research projects and publications related to the impacts of energy development on fish and wildlife resources, tools to assess those impacts, and solutions to avoid or minimize risk. This information helps decision makers balance development with stewardship of the Nation’s fish and wildlife heritage.

Circular↗
USGS2022

Influence of offshore oil and gas structures on seascape ecological connectivity

Offshore platforms, subsea pipelines, wells and related fixed structures supporting the oil and gas (O&G) industry are prevalent in oceans across the globe, with many approaching the end of their operational life and requiring decommissioning. Although structures can possess high ecological diversity and productivity, information on how they interact with broader ecological processes remains unclear. Here, we review the current state of knowledge on the role of O&G infrastructure in maintaining, altering or enhancing ecological connectivity with natural marine habitats. There is a paucity of studies on the subject with only 33 papers specifically targeting connectivity and O&G structures, although other studies provide important related information. Evidence for O&G structures facilitating vertical and horizontal seascape connectivity exists for larvae and mobile adult invertebrates, fish and megafauna; including threatened and commercially important species. The degree to which these structures represent a beneficial or detrimental net impact remains unclear, is complex and ultimately needs more research to determine the extent to which natural connectivity networks are conserved, enhanced or disrupted. We discuss the potential impacts of different decommissioning approaches on seascape connectivity and identify, through expert elicitation, critical knowledge gaps that, if addressed, may further inform decision making for the life cycle of O&G infrastructure, with relevance for other industries (e.g. renewables). The most highly ranked critical knowledge gap was a need to understand how O&G structures modify and influence the movement patterns of mobile species and dispersal stages of sessile marine species. Understanding how different decommissioning options affect species survival and movement was also highly ranked, as was understanding the extent to which O&G structures contribute to extending species distributions by providing rest stops, foraging habitat, and stepping stones. These questions could be addressed with further dedicated studies of animal movement in relation to structures using telemetry, molecular techniques and movement models. Our review and these priority questions provide a roadmap for advancing research needed to support evidence-based decision making for decommissioning O&G infrastructure.

Global Change Biology↗
USGS2019

Demographic factors affecting population growth in giant gartersnakes

Demographic models provide insight into which vital rates and life stages contribute most to population growth. Integral projection models (IPMs) offer flexibility in matching model structure to a species’ demography. For many rare species, data are lacking for key vital rates, and uncertainty might dissuade researchers from attempting to build a demographic model. We present work that highlights how the implications of uncertainties and unknowns can be explored by building and analyzing alternative models. We constructed IPMs for the threatened giant gartersnake ( Thamnophis gigas ) based on published studies to determine where management efforts could be targeted to have the greatest effect on population persistence and what unknowns remain for future research. Given uncertainty in the survival of snakes during their first year, and in the form of the size‐survival relationship, we modeled a range of scenarios and evaluated where models agree about factors influencing population growth and where discrepancies exist. For most scenarios, the survival of large adult females had the greatest influence on population growth, but the relative importance of juvenile versus adult somatic growth for population growth was dependent on the recruitment probability and the shape of the size‐survival function. More data on temporal variation and covariance among vital rates would improve stochastic models for the giant gartersnake. This paper demonstrates the effectiveness of IPMs for studying the demography of reptiles and the value of the model‐building process for formalizing what is known and unknown about the demography of rare species. Published 2019. This article is a U.S. Government work and is in the public domain in the USA.

California↗
USGS2024

The geochemistry of continental hydrothermal systems

Hydrothermal systems on the continents are of great significance because they are primary sources of economically important metals and geothermal energy, they are tourist attractions, they support bathing and health resorts, and they host extreme life forms. Research on hot springs and their deposits provide clues to early life on Earth and possibly on Mars and have led to major breakthroughs in biotechnology. Aqueous and gas-rich hydrothermal fluids also contribute to a range of volcanic hazards including the destabilization of volcanic edifices, acting as propellant in steam-driven hydrothermal explosions, reducing effective stresses in mudflows (lahars), emitting toxic and potentially lethal gases, and transporting toxic metals to watersheds. The main goals of this review are to summarize the state of knowledge on the chemistry of continental hydrothermal systems and highlight the myriad processes that operate under a wide range of temperatures, pressures, chemical compositions, and oxidation states.

Book chapter↗
USGS2014

Organization of marine phenology data in support of planning and conservation in ocean and coastal ecosystems

Among the many effects of climate change is its influence on the phenology of biota. In marine and coastal ecosystems, phenological shifts have been documented for multiple life forms; however, biological data related to marine species' phenology remain difficult to access and is under-used. We conducted an assessment of potential sources of biological data for marine species and their availability for use in phenological analyses and assessments. Our evaluations showed that data potentially related to understanding marine species' phenology are available through online resources of governmental, academic, and non-governmental organizations, but appropriate datasets are often difficult to discover and access, presenting opportunities for scientific infrastructure improvement. The developing Federal Marine Data Architecture when fully implemented will improve data flow and standardization for marine data within major federal repositories and provide an archival repository for collaborating academic and public data contributors. Another opportunity, largely untapped, is the engagement of citizen scientists in standardized collection of marine phenology data and contribution of these data to established data flows. Use of metadata with marine phenology related keywords could improve discovery and access to appropriate datasets. When data originators choose to self-publish, publication of research datasets with a digital object identifier, linked to metadata, will also improve subsequent discovery and access. Phenological changes in the marine environment will affect human economics, food systems, and recreation. No one source of data will be sufficient to understand these changes. The collective attention of marine data collectors is needed—whether with an agency, an educational institution, or a citizen scientist group—toward adopting the data management processes and standards needed to ensure availability of sufficient and useable marine data to understand marine phenology.

Ecological Informatics↗
USGS2017

Perspectives on chemical oceanography in the 21st century: Participants of the COME ABOARD Meeting examine aspects of the field in the context of 40 years of DISCO

The questions that chemical oceanographers prioritize over the coming decades, and the methods we use to address these questions, will define our field's contribution to 21st century science. In recognition of this, the U.S. National Science Foundation and National Oceanic and Atmospheric Administration galvanized a community effort (the Chemical Oceanography MEeting: A BOttom-up Approach to Research Directions, or COME ABOARD) to synthesize bottom-up perspectives on selected areas of research in Chemical Oceanography. Representing only a small subset of the community, COME ABOARD participants did not attempt to identify targeted research directions for the field. Instead, we focused on how best to foster diverse research in Chemical Oceanography, placing emphasis on the following themes: strengthening our core chemical skillset; expanding our tools through collaboration with chemists, engineers, and computer scientists; considering new roles for large programs; enhancing interface research through interdisciplinary collaboration; and expanding ocean literacy by engaging with the public. For each theme, COME ABOARD participants reflected on the present state of Chemical Oceanography, where the community hopes to go and why, and actionable pathways to get there. A unifying concept among the discussions was that dissimilar funding structures and metrics of success may be required to accommodate the various levels of readiness and stages of knowledge development found throughout our community. In addition to the science, participants of the concurrent Dissertations Symposium in Chemical Oceanography (DISCO) XXV, a meeting of recent and forthcoming Ph.D. graduates in Chemical Oceanography, provided perspectives on how our field could show leadership in addressing long-standing diversity and early-career challenges that are pervasive throughout science. Here we summarize the COME ABOARD Meeting discussions, providing a synthesis of reflections and perspectives on the field.

Marine Chemistry↗
USGS2010

Science Support for Climate Change Adaptation in South Florida

Earth's changing climate is among the foremost conservation challenges of the 21st century, threatening to permanently alter entire ecosystems and contribute to extinctions of species. Lying only a few feet above sea level and already suffering effects of anthropogenic stressors, south Florida's ecosystems are particularly vulnerable to negative impacts of climate change. Recent research accounting for the gravitational effects of melting ice sheets predicts that sea level rise on U.S. coastlines will be much higher than global averages (Gomez et al. 2010), and the Miami-Dade Climate Change Advisory Task Force predicts that local sea level rise will be at least 3 to 5 ft. (0.9 m to 1.5 m) by 2100 (MDCCATF 2008). In a 5 ft. scenario, up to 873 additional square miles of the Everglades would be inundated with saltwater (see maps below). Accelerated sea level rise is likely to be accompanied by increasing temperatures (IPCC 2007a) and more intense tropical storms and hurricanes (Webster et al. 2005). In addition, changes in amount, timing, and distribution of rainfall in south Florida may lead to more severe droughts and floods (SFWMD 2009).

Florida↗
USGS2011

Informal and formal trail monitoring protocols and baseline conditions: Acadia National Park

At Acadia National Park, changing visitor use levels and patterns have contributed to an increasing degree of visitor use impacts to natural and cultural resources. To better understand the extent and severity of these resource impacts and identify effective management techniques, the park sponsored this research to develop monitoring protocols, collect baseline data, and identify suggestions for management strategies. Formal and informal trails were surveyed and their resource conditions were assessed and characterized to support park planning and management decision-making.

Report↗
USGS2006

Growth and collapse of Hawaiian volcanoes

This special issue is an outgrowth of a session of the same name held at the 2003 Fall Meeting of the American Geophysical Union (AGU) in San Francisco. The session served dual purposes: to highlight recent advances in our understanding of the development and internal structure of Hawaiian volcanoes, and to recognize the important contributions of James Moore to this field of study.

Hawai'i↗