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Results for “Population Ecology”

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At least 505 records · Page 28Linked to original sources

USGS2000

Piping Plover brood foraging ecology on New York barrier islands

Effective management of piping plover (Charadrius melodus) populations requires knowledge of the habitats that foster successful reproduction. We studied piping plover chick foraging ecology and survival on the central barrier islands of Long Island, New York, 1992 and 1993. Within the 90-km study area, all 1-km beach segments with ephemeral pools or bay tidal flats were used for nesting and brood rearing, whereas <50% of beach segments without these habitats were used. On beach segments with ephemeral pools, broods preferred ephemeral pools to ocean intertidal zone, wrack, backshore, open vegetation, and interdune habitat. Indices of terrestrial arthropod abundance and foraging rates were greater in ephemeral pools than in other habitats. In 1992, chick survival was higher on beach segments with ephemeral pools than on segments without ephemeral pools. On beach segments with bay tidal flats, broods preferred bay tidal flats and wrack to ocean intertidal zone, backshore, and open vegetation habitats. Foraging rates in bay tidal flats were similar to those in ephemeral pools and greater than in open vegetation, wrack, and backshore habitats. On beach segments without ephemeral pools and bay tidal flats, broods preferred wrack to all other habitats, and open vegetation was second most preferred. To assist in the recovery of the piping plover, land-use planners should avoid beach management practices (e.g., beach filling, dune building, renourishment) that typically inhibit natural renewal of ephemeral pools, bay tidal flats, and open vegetation habitats.

New York↗

USGS2023

Virtual snow stakes: a new method for snow depth measurement at remote camera stations

Remote cameras are used to study demographics, ecological processes, and behavior of wildlife populations. Cameras have also been used to measure snow depth with physical snow stakes. However, concerns that physical instruments at camera sites may influence animal behavior limit installation of instruments to facilitate collecting such data. Given that snow depth data are inherently contained within images, potential insights that could be made using these data are lost. To facilitate camera-based snow depth observations without additional equipment installation, we developed a method implemented in an R package called edger to superimpose virtual measurement devices onto images. The virtual snow stakes can be used to derive snow depth measurements. We validated the method for snow depth estimation using camera data from Latah County, Idaho, USA in winter 2020–2021. Mean bias error between the virtual snow stake and a physical snow stake was 5.8 cm; the mean absolute bias error was 8.8 cm. The mean Nash Sutcliffe Efficiency score comparing the fit of the 2 sets of measurements within each camera was 0.748, indicating good agreement. The edger package provides researchers with a means to take critical measurements for ecological studies without the use of physical objects that could alter animal behavior, and snow data at finer scales can complement other snow data sources that have coarser spatial and temporal resolution.

Idaho↗

USGS2025

Disease-driven collapse of the native Kauaʻi avifauna and the rise of introduced bird species

Hawaii hosts one of Earth’s most unique and threatened avifaunas. Upslope migration of mosquito-vectored avian malaria on Kauaʻi (maximum elevation 1,598 m) has likely caused its rapid loss of avifaunal diversity; only 8 of 13 historic forest bird species remain. We update the status and trends of Kauaʻi forest bird populations since the original (1981) surveys using the latest (2023) survey data and distance sampling. We fit detection functions to species-specific count data and stratified estimates across the Interior (since 1981) and Exterior (since 2000) survey areas, and between low (900–1,100 m), medium (1,100–1,300 m) and high (> 1,300 m) elevation bands (since 2000). Log-linear trends of ʻakekeʻe ( Loxops caeruleirostris ), ʻanianiau ( Magumma parva ), ʻiʻiwi ( Drepanis coccinea ), and Kauaʻi ʻamakihi ( Chlorodrepanis stejnegeri ) steeply declined across the timeseries, with extinction of ʻakekeʻe and ʻiʻiwi expected before 2050. Undetected in 2023, ʻakikiki ( Oreomystis bairdi ) were excluded from analysis. ʻApapane ( Himatione sanguinea ), Kauaʻi ʻelepaio ( Chasiempis sclateri ), Chinese hwamei ( Garrulax canorus ), and white-rumped shama ( Copsychus malabaricus ) were stable overall. Northern cardinal ( Cardinalis cardinalis ) steadily declined, whereas Japanese bush warbler ( Horornis diphone ) and warbling white-eye ( Zosterops japonicus ) exponentially increased. Taxonomic and functional diversity did not vary greatly across our timeseries, while the proportion of introduced species in the Exterior increased from 34 to 59%. However, introduced species do not replace the losses of ecological functions from native species, whose populations are likely declining from avian malaria. Future monitoring can be used to evaluate forest bird population responses to mosquito suppression using the Incompatible Insect Technique.

Hawaii↗

USGS2018

Integrating animal movement with habitat suitability for estimating dynamic migratory connectivity

Context High-resolution animal movement data are becoming increasingly available, yet having a multitude of empirical trajectories alone does not allow us to easily predict animal movement. To answer ecological and evolutionary questions at a population level, quantitative estimates of a species’ potential to link patches or populations are of importance. Objectives We introduce an approach that combines movement-informed simulated trajectories with an environment-informed estimate of the trajectories’ plausibility to derive connectivity. Using the example of bar-headed geese we estimated migratory connectivity at a landscape level throughout the annual cycle in their native range. Methods We used tracking data of bar-headed geese to develop a multi-state movement model and to estimate temporally explicit habitat suitability within the species’ range. We simulated migratory movements between range fragments, and calculated a measure we called route viability. The results are compared to expectations derived from published literature. Results Simulated migrations matched empirical trajectories in key characteristics such as stopover duration. The viability of the simulated trajectories was similar to that of the empirical trajectories. We found that, overall, the migratory connectivity was higher within the breeding than in wintering areas, corroborating previous findings for this species. Conclusions We show how empirical tracking data and environmental information can be fused for meaningful predictions of animal movements throughout the year and even outside the spatial range of the available data. Beyond predicting migratory connectivity, our framework will prove useful for modelling ecological processes facilitated by animal movement, such as seed dispersal or disease ecology.

Landscape Ecology↗

USGS2006

Relationships among condition indices, feeding and growth of walleye in Lake Erie

Condition indices are often used as surrogates of fish health, growth, and feeding and to compare ecological well-being among fish populations. In an effort to identify easily measured indices, growth and food consumption were compared with gonadal-somatic index, liver-somatic index (LSI), fat-somatic index and relative weight (Wr) for ages 1-3 walleye, Sander vitreus (Mitchill), in Lake Erie from 1986 to 1988. The LSI and Wr were significantly correlated with growth rate or food consumption, but correlations were too small to be considered biologically meaningful. Furthermore, no consistent relationships between condition indices and growth or consumption were found among combinations of fish age and season. None of the indices are considered reliable surrogates for more laborious estimates of growth and food consumption for Lake Erie walleye. Significant relationships between Wr and relative abundance of key prey species warrant further investigation. ?? 2006 Blackwell Publishing Ltd.

Fisheries Management and Ecology↗

USGS2017

Estimating the per-capita contribution of habitats and pathways in a migratory network: A modelling approach

Every year, migratory species undertake seasonal movements along different pathways between discrete regions and habitats. The ability to assess the relative demographic contributions of these different habitats and pathways to the species’ overall population dynamics is critical for understanding the ecology of migratory species, and also has practical applications for management and conservation. Metrics for assessing habitat contributions have been well-developed for metapopulations, but an equivalent metric is not currently available for migratory populations. Here, we develop a framework for estimating the demographic contributions of the discrete habitats and pathways used by migratory species throughout the annual cycle by estimating the per capita contribution of cohorts using these locations. Our framework accounts for seasonal movements between multiple breeding and non-breeding habitats and for both resident and migratory cohorts. We illustrate our framework using a hypothetical migratory network of four habitats, which allows us to better understand how variations in habitat quality affect per capita contributions. Results indicate that per capita contributions for any habitat or pathway are dependent on habitat-specific survival probabilities in all other areas used as part of the migratory circuit, and that contribution metrics are spatially linked (e.g. reduced survival in one habitat also decreases the contribution metric for other habitats). Our framework expands existing theory on the dynamics of spatiotemporally structured populations by developing a generalized approach to estimate the habitat- and pathway-specific contributions of species migrating between multiple breeding and multiple non-breeding habitats for a range of life histories or migratory strategies. Most importantly, it provides a means of prioritizing conservation efforts towards those migratory pathways and habitats that are most critical for the population viability of migratory species.

Ecography↗

USGS2023

Diverse portfolios: Investing in tributaries for restoration of large river fishes in the Anthropocene

Rehabilitation of large Anthropocene rivers requires engagement of diverse stakeholders across a broad range of sociopolitical boundaries. Competing objectives often constrain options for ecological restoration of large rivers whereas fewer competing objectives may exist in a subset of tributaries. Further, tributaries contribute toward building a “portfolio” of river ecosystem assets through physical and biological processes that may present opportunities to enhance the resilience of large river fishes. Our goal is to review roles of tributaries in enhancing mainstem large river fish populations. We present case histories from two greatly altered and distinct large-river tributary systems that highlight how tributaries contribute four portfolio assets to support large-river fish populations: 1) habitat diversity, 2) connectivity, 3) ecological asynchrony, and 4) density-dependent processes. Finally, we identify future research directions to advance our understanding of tributary roles and inform conservation actions. In the Missouri River United States, we focus on conservation efforts for the state endangered lake sturgeon, which inhabits large rivers and tributaries in the Midwest and Eastern United States. In the Colorado River, Grand Canyon United States, we focus on conservation efforts for recovery of the federally threatened humpback chub. In the Missouri River, habitat diversity focused on physical habitats such as substrate for reproduction, and deep-water habitats for refuge, whereas augmenting habitat diversity for Colorado River fishes focused on managing populations in tributaries with minimally impaired thermal and flow regimes. Connectivity enhancements in the Missouri River focused on increasing habitat accessibility that may require removal of physical structures like low-head dams; whereas in the Colorado River, the lack of connectivity may benefit native fishes as the disconnection provides refuge from non-native fish predation. Hydrologic variability among tributaries was present in both systems, likely underscoring ecological asynchrony. These case studies also described density dependent processes that could influence success of restoration actions. Although actions to restore populations varied by river system, these examples show that these four portfolio assets can help guide restoration activities across a diverse range of mainstem rivers and their tributaries. Using these assets as a guide, we suggest these can be transferable to other large river-tributary systems.

Frontiers in Environmental Science↗

USGS2011

Feeding ecology and energetics

Successful management of walleye and sauger populations often requires a detailed knowledge of prey resources. As with many fishes, diets of juvenile Sander spp. are often different than those of adult fish and can have important implications for growth and survival. Similarly, spatial and temporal variation in diet composition can contribute to variation in growth and production of Sander populations. Thus, management efforts (e.g., stocking) aimed at enhancing walleye and sauger populations benefit from the knowledge and tools to effectively quantify feeding patterns. Today, fisheries managers face a myriad of challenges posed by nonnative species, eutrophication, climate change, and water availability, to name just a few. As a result, knowledge about prey use, energetics, and effects of Sander populations on food web structure has increased dramatically in the last 30 years. Experimental work with larval and juvenile walleyes has provided new insights into factors affecting growth and survival during early life stages (see Chapter 7) that has benefitted management and propagation efforts. Similarly, contemporary analytical approaches, such as bioenergetics modeling and stable isotope analysis, have improved our understanding of walleye foraging behavior and provided new tools for exploring trophic interactions. In this chapter, we review the general feeding ecology of walleye and sauger and highlight contemporary approaches for quantifying energy acquisition and trophic interactions.

Book chapter↗

USGS2024

Origin stories: How does learned migratory behaviour arise in populations?

Although decades of research have deepened our understanding of the proximate triggers and ultimate drivers of migrations for a range of taxa, how populations establish migrations remains a mystery. However, recent studies have begun to illuminate the interplay between genetically inherited and learned migrations, opening the door to the evaluation of how migration may be learned, established, and maintained. Nevertheless, for migratory species where the role of learning is evident, we lack a comprehensive framework for understanding how populations learn specific routes and refine migratory movements over time (i.e., their origins). This review draws on advances in behavioural and movement ecology to offer a comprehensive framework for how populations could transition from resident to migratory by connecting cognitive research on fine-scale perceptual cues and movement decisions with literature on learning and cultural transmission, to the emergent pattern of migration. We synthesize the multiple cognitive mechanisms and processes that allow a population to respond to seasonal resource limitation, then encode spatial and environmental information about resource availability in memory and engage in social learning to navigate their landscapes and track resources better. A rise in global reintroduction efforts, along with human-induced rapid shifts in environmental cues and changing landscapes make evaluating the origins of this threatened behaviour more urgent than ever.

Biological Reviews↗

USGS2025

Are behavioural ecotoxicity endpoints relevant at the population level? Evidence-based insights for environmental protection

A substantial body of evidence exists demonstrating that exposure to environmental contaminants can alter animal behavior. Moreover, methodological and technological advancements, as well as increasing standardization, mean that behavioral ecotoxicity studies are more rigorous and reliable than ever before. Despite this, behavioral data are still seldom used in the risk assessment and regulation of chemicals. This is partly due to a lack of clarity among some stakeholders about whether changes in behavior at the individual level result in population-level outcomes. To address this, we first consider the state of evidence within the field of behavioral ecotoxicology linking individual-level behavioral alterations with population-level consequences. We then assess the evidence from behavioral ecology and other neighboring fields that supports this link. Further, we evaluate whether some behavioral endpoints are more easily tied to population-level changes than others. In this regard, we propose combining insights from two complementary ecological frameworks─the functional trait framework and the limiting traits framework─to evaluate which behaviors should be prioritized in ecotoxicological research and regulatory efforts. We contend that the link between behavioral changes and population-level outcomes is evident, with behavioral endpoints representing a highly valuable yet so far underutilized line of evidence in applied environmental protection.

Environmental Science and Technology↗

USGS2021

Exploiting common senses: Sensory ecology meets wildlife conservation and management

Multidisciplinary approaches to conservation and wildlife management are often effective in addressing complex, multi-factor problems. Emerging fields such as conservation physiology and conservation behaviour can provide innovative solutions and management strategies for target species and systems. Sensory ecology combines the study of ‘how animals acquire’ and process sensory stimuli from their environments, and the ecological and evolutionary significance of ‘how animals respond’ to this information. We review the benefits that sensory ecology can bring to wildlife conservation and management by discussing case studies across major taxa and sensory modalities. Conservation practices informed by a sensory ecology approach include the amelioration of sensory traps, control of invasive species, reduction of human–wildlife conflicts and relocation and establishment of new populations of endangered species. We illustrate that sensory ecology can facilitate the understanding of mechanistic ecological and physiological explanations underlying particular conservation issues and also can help develop innovative solutions to ameliorate conservation problems.

Conservation Physiology↗

USGS2022

Life and death in a dynamic environment: Invasive trout, floods, and intraspecific drivers of translocated populations

Understanding the relative strengths of intrinsic and extrinsic factors regulating populations is a long-standing focus of ecology and critical to advancing conservation programs for imperiled species. Conservation could benefit from an increased understanding of factors influencing vital rates (somatic growth, recruitment, survival) in small, translocated populations, which is lacking owing to difficulties in long-term monitoring of rare species. Translocations, here defined as the transfer of wild-captured individuals from source populations to new habitats, are widely used for species conservation, but outcomes are often minimally monitored, and translocations that are monitored often fail. To improve our understanding of how translocated populations respond to environmental variation, we developed and tested hypotheses related to intrinsic (density dependent) and extrinsic (introduced rainbow trout Oncorhynchus mykiss , stream flow and temperature regime) causes of vital rate variation in endangered humpback chub ( Gila cypha ) populations translocated to Colorado River tributaries in the Grand Canyon (GC), USA. Using biannual recapture data from translocated populations over 10 years, we tested hypotheses related to seasonal somatic growth, and recruitment and population growth rates with linear mixed-effects models and temporal symmetry mark–recapture models. We combined data from recaptures and resights of dispersed fish (both physical captures and continuously recorded antenna detections) from throughout GC to test survival hypotheses, while accounting for site fidelity, using joint live-recapture/live-resight models. While recruitment only occurred in one site, which also drove population growth (relative to survival), evidence supported hypotheses related to density dependence in growth, survival, and recruitment, and somatic growth and recruitment were further limited by introduced trout. Mixed-effects models explained between 67% and 86% of the variation in somatic growth, which showed increased growth rates with greater flood-pulse frequency during monsoon season. Monthly survival was 0.56–0.99 and 0.80–0.99 in the two populations, with lower survival during periods of higher intraspecific abundance and low flood frequency. Our results suggest translocations can contribute toward the recovery of large-river fishes, but continued suppression of invasive fishes to enhance recruitment may be required to ensure population resilience. Furthermore, we demonstrate the importance of flooding to population demographics in food-depauperate, dynamic, invaded systems.

Arizona↗

USGS2013

Occupancy patterns of mammals and lentic amphibians in the Elwha River riparian zone before dam removal

The downstream transport of sediments and organics and upstream migration of anadromous fishes are key ecological processes in unregulated riverine ecosystems of the North Pacific coast, but their influence on wildlife habitats and populations is poorly documented. Removal of two large hydroelectric dams in Washington’s Elwha Valley provides an unprecedented opportunity to study long-term responses of wildlife populations to dam removal and restoration of these key ecological processes. We compared pre-dam removal patterns in the relative abundance and occupancy of mesocarnivores, small mammals and lentic amphibians of the Elwha River riparian zone above, between and below the dams. Occupancy of riparian habitats by three mesocarnivore species diminished upriver but did not appear to be closely linked with the absence of salmon in the upper river. Although the importance of salmon in the lower river cannot be discounted, other gradients in food resources also likely contributed to observed distribution patterns of mesocarnivores. Abundance and occupancy patterns within congeneric pairs of new world mice (Peromyscus spp.) and shrews (Sorex spp.) indicated that closely related species were negatively associated with each other and responded to habitat gradients in the riparian zone. The availability of lentic habitats of amphibians was highly variable, and occupancy was low as a result of rapidly changing flows during the larval development period. We speculate that long-term changes in habitat conditions and salmon availability following dam removal will elicit long-term changes in distribution of mesocarnivores, small mammals and amphibians. Long-term monitoring will enhance understanding of the role of fish and restored ecosystem processes on wildlife communities along salmon-bearing rivers in the region.

Washington↗

USGS2019

Riverine turtles select habitats maintained by natural discharge regimes in an unimpounded large river

Turtle populations are imperiled worldwide, but limited ecological information from unaltered systems hampers science‐based management and conservation of some species, especially riverine turtles such as the spiny softshell ( Apalone spinifera ). We therefore investigated movements and spatial habitat selection of 54 A . spinifera in 633 river kilometres (rkm) of the least‐altered river in the conterminous United States—the Yellowstone River in Montana—from 2005 to 2009. Movement rates and home ranges were smaller than in fragmented, altered river systems because nesting and overwintering habitats were common and in close proximity. Habitat selection also differed. A . spinifera in the Yellowstone River overwintered in unaltered bluff pools and summered in complex reaches with side channels, islands, and diverse habitats. However, those in the highly altered Missouri River used deep alluvial pools for overwintering and flooded, inundated, or backwatered tributary mouths in spring and summer. Importantly, selected habitats in both rivers were functionally similar, including complex river reaches (with multiple channels, islands, and diverse habitats) and natural pool types. Unfortunately, these are the very habitats that are limited in rivers affected by dams, bank stabilization, and channelization. Therefore, preservation of natural and diverse riverine habitats—and the fluvial dynamics that maintain them—may enhance conservation of A . spinifera in large rivers.

Montana, North Dakota, South Dakota, Wyoming↗

USGS2015

Comparing spatial capture–recapture modeling and nest count methods to estimate orangutan densities in the Wehea Forest, East Kalimantan, Indonesia

Accurate information on the density and abundance of animal populations is essential for understanding species' ecology and for conservation planning, but is difficult to obtain. The endangered orangutan ( Pongo spp.) is an example; due to its elusive behavior and low densities, researchers have relied on methods that convert nest counts to orangutan densities and require substantial effort for reliable results. Camera trapping and spatial capture–recapture (SCR) models could provide an alternative but have not been used for primates. We compared density estimates calculated using the two methods for orangutans in the Wehea Forest, East Kalimantan, Indonesia. Camera trapping/SCR modeling produced a density estimate of 0.16 ± 0.09–0.29 indiv/km 2 , and nest counts produced a density estimate of 1.05 ± 0.18–6.01 indiv/km 2 . The large confidence interval of the nest count estimate is probably due to high variance in nest encounter rates, indicating the need for larger sample size and the substantial effort required to produce reliable results using this method. The SCR estimate produced a very low density estimate and had a narrower but still fairly wide confidence interval. This was likely due to unmodeled heterogeneity and small sample size, specifically a low number of individual captures and recaptures. We propose methodological fixes that could address these issues and improve precision. A comparison of the overall costs and benefits of the two methods suggests that camera trapping/SCR modeling can potentially be a useful tool for assessing the densities of orangutans and other elusive primates, and warrant further investigation to determine broad applicability and methodological adjustments needed.

East Kalimantan↗

USGS2015

Spatial and temporal variability in growth of southern flounder ( Paralichthys lethostigma )

Delineation of stock structure is important for understanding the ecology and management of many fish populations, particularly those with wide-ranging distributions and high levels of harvest. Southern flounder ( Paralichthys lethostigma ) is a popular commercial and recreational species along the southeast Atlantic coast and Gulf of Mexico, USA. Recent studies have provided genetic and otolith morphology evidence that the Gulf of Mexico and Atlantic Ocean stocks differ. Using age and growth data from four states (Texas, Alabama, South Carolina, and North Carolina) we expanded upon the traditional von Bertalanffy model in order to compare growth rates of putative geographic stocks of southern flounder. We improved the model fitting process by adding a hierarchical Bayesian framework to allow each parameter to vary spatially or temporally as a random effect, as well as log transforming the three model parameters ( L ∞ , K , and t 0 ). Multiple comparisons of parameters showed that growth rates varied (even within states) for females, but less for males. Growth rates were also consistent through time, when long-term data were available. Since within-basin populations are thought to be genetically well-mixed, our results suggest that consistent small-scale environmental conditions (i.e., within estuaries) likely drive growth rates and should be considered when developing broader scale management plans.

Fisheries Research↗

USGS2013

Habitat use and diet composition of juvenile Atlantic salmon in a tributary of Lake Ontario

The habitat use and diet of juvenile Atlantic salmon Salmo salar was examined in the South Sandy Creek drainage that discharges into eastern Lake Ontario. Subyearling salmon were stocked in early May during two consecutive years, and habitat and diet evaluations were made in mid-July and mid-October in 2005 and 2006. Both subyearling and yearling Atlantic salmon occupied deeper and faster areas that had more cover and larger sized substrate materials than was present, on average, within the study reach. Differences in habitat use between subyearling and yearling salmon only occurred in summer. Principal component analysis showed that of the habitat variables examined, the amount of cover and size of substrate were more important to juvenile salmon in summer, whereas depth and velocity were more important in the fall. Trichopteran larvae (mainly hydropsychids) dominated the diet of juvenile Atlantic salmon, and parr were feeding most heavily from the substrate as compared to the drift. The juvenile ecology of this re-introduced population of Atlantic salmon is consistent with that reported in other studies throughout the species native range.

Journal of Great Lakes Research↗

USGS2024

Documentation of a probable spawning run of cisco Coregonus artedi in the Spanish River, Ontario, Canada

Coregonines were historically diverse and abundant in the Laurentian Great Lakes but declined throughout the 19th and 20th centuries due to multiple factors, including overfishing, habitat degradation, and interactions with invasive species. Great Lakes fishery managers are now working to restore coregonines across the basin. An important aspect of restoration efforts is the identification of key habitats, such as spawning habitats. Our understanding of the extent and diversity of coregonine spawning habitats in the Great Lakes is limited. Historical accounts suggest some cisco Coregonus artedi migrated to tributaries to spawn, but contemporary runs have not been reported. Moreover, cisco display considerable phenotypic variation, with different “forms” often occupying specific habitats or regions. We provide evidence for a previously undocumented spawning run of cisco in the Spanish River, a tributary to the North Channel of Lake Huron. We captured 31 mature and ripe fish (25 males, 6 females) approximately 52 km upstream of the river mouth on 15–16 November 2022. The fish ranged in age from 3-9 yr and total length from 287-394 mm. Of these 31 individuals, 27 were morphologically similar to C. artedi manitoulinus , a subspecies of cisco found in the North Channel; however, four individuals more closely resembled cisco captured in other areas of Lake Huron. These findings represent the best evidence of tributary spawning by cisco since the 1880s, and they have important implications for coregonine conservation and restoration efforts. Ongoing work aims to augment our understanding of the ecological and evolutionary importance of this population.

Ontario↗