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Water-quality assessment of the Central Arizona Basins, Arizona and northern Mexico – Environmental setting and overview of water quality

The Central Arizona Basins study area in central and southern Arizona and northern Mexico is one of 60 study units that are part of the U.S. Geological Survey's National Water-Quality Assessment program. The purpose of this report is to describe the physical, chemical, and environmental characteristics that may affect water quality in the Central Arizona Basins study area and present an overview of water quality. Covering 34,700 square miles, the study area is characterized by generally north to northwestward-trending mountain ranges separated by broad, gently sloping alluvial valleys. Most of the perennial rivers and streams are in the northern part of the study area. Rivers and streams in the south are predominantly intermittent or ephemeral and flow in response to precipitation such as summer thunderstorms. Effluent-dependent streams do provide perennial flow in some reaches. The major aquifers in the study area are in the basin-fill deposits that may be as much as 12,000 feet thick. The 1990 population in the study area was about 3.45 million, and about 61 percent of the total was in Maricopa County (Phoenix and surrounding cities). Extensive population growth over the past decade has resulted in a twofold increase in urban land areas and increased municipal water use; however, agriculture remains the major water use. Seventy-three percent of all water with drawn in the study area during 1990 was used for agricultural purposes. The largest rivers in the study area-the Gila, Salt, and Verde-are perennial near their headwaters but become intermittent downstream because of impoundments and artificial diversions. As a result, the Central Arizona Basins study area is unique compared to less arid basins because the mean surface-water outflow is only 528 cubic feet per second from a total drainage area of 49,650 square miles. Peak flows in the northern part of the study area are the result of snowmelt runoff; whereas, summer thunderstorms account for the peak flows in the southern part. Ground water is the primary water supply in most of Arizona and the only source of drinking water used by communities in the southern half of the study area. Years of overpumping have caused water tables in basin fill to drop below once-perennial streams leaving streambeds dry, water too deep to pump economically, pumping of poorer quality water with depth, and earth fissures resulting from subsidence after dewatering of sediments. Natural processes-such as leaching of trace elements and major ions from geologic formations-and human activities-such as mining, agriculture, and urban development-have major effects on the quality of surface-water and ground-water resources in the Central Arizona Basins study area. Surface-water quality standards in Arizona are based on the designated use of the water such as full or partial body contact, fish consumption, aquatic and wildlife uses, and agriculture. Maintaining the biological integrity (health) of surface waters in Arizona is an important part of ensuring that these waters are suitable for designated uses. Important water-quality issues for surface water that are somewhat unique to Arizona include: (1) streamflows and riparian environments sustained by effluent from municipal wastewater-treatment plants that contains high concentrations of nutrients, potentially toxic trace elements and organic compounds, and fecal bacteria; (2) industrial, mining, agricultural, and municipal sources of contamination from Mexico; and (3) unpredictable high flows from major summer thunder storms causing stream-channel changes; high suspended-sediment concentrations and loads; sewage overflows; and breaching, erosion, and washout of landfills and mining operations. The quality of water in aquifers that are protected for drinking- water use is subject to standards that are in most cases equal to or more stringent than the primary drinking-water regulations of the U.S. Environmental Protection Agency. The general che

Arizona

Benthic habitats and offshore geological resources of Kaloko-Honokohau National Historical Park, Hawai‘i

Kaloko-Honokōhau National Historical Park (KAHO) is one of three National Park lands located along the western coast of the Island of Hawai‘i and the only one to include submerged lands and marine resources within its official boundaries. The park was established in 1978 and is 1,160 acres in size, including 596 acres of marine area. The submerged lands are currently managed by the State of Hawaii, Department of Land and Natural Resources, Division of Aquatic Resources (DLNR-DAR). Marine resources located within KAHO include coral reef and habitat for many marine animals, including the green sea turtle and a variety of fish and invertebrates. In addition, many archeological, cultural, and recreational resources are located within the marine realm of the park. Potential threats and stressors to the modern marine environment include ground-water and surface-water contamination, invasive plants and algae, fishing pressure and use of monofilament gill nets (which can ensnare marine life or become tangled on reefs and be left behind as fishing debris), and visitor use impacts, such as scuba diving and snorkeling. Illegal dumping, oil releases, boat groundings, and other physical damage to reef resources are potential threats from users of the nearby harbor. Special issues of concern for the park include establishing baseline conditions of the offshore resources before the development of adjacent coastal lands. Until this study, only a general knowledge of the distribution of benthic habitats and the characteristics of the offshore region of Kaloko-Honokōhau National Historical Park was available. In 2003, a collaborative project between the U.S. Geological Survey (USGS) Coastal and Marine Geology Program and the National Park Service (NPS) was initiated to develop detailed benthic-habitat classification maps for the marine lands within and adjacent to the park. The intent of this project is to provide baseline maps and a Geographic Information System (GIS) database and description of the biological and geological resources of these marine lands in order to facilitate the management, interpretation, and understanding of park resources. A benthic-habitat classification map was created for the park using existing color aerial photography, Scanning Hydrographic Operational Airborne Lidar Survey (SHOALS) bathymetric data, georeferenced underwater video, and still photography. Individual habitat polygons were classified using five basic attributes: (1) major structure or substrate, (2) dominant structure, (3) major biologic cover on the substrate, (4) percentage of major biological cover, and (5) geographic zone. Additional information regarding geology, morphology, and coral species were also noted. Marine resources located within KAHO include coral reef and habitat for many marine animals, including the green sea turtle and a variety of fish and invertebrates. In addition, many archeological, cultural, and recreational resources are located within the marine realm of the park. Potential threats and stressors to the modern marine environment include ground-water and surface-water contamination, invasive plants and algae, fishing pressure and use of monofilament gill nets (which can ensnare marine life or become tangled on reefs and be left behind as fishing debris), and visitor use impacts, such as scuba diving and snorkeling. Illegal dumping, oil releases, boat groundings, and other physical damage to reef resources are potential threats from users of the nearby harbor. Special issues of concern for the park include establishing baseline conditions of the offshore resources before the development of adjacent coastal lands. Until this study, only a general knowledge of the distribution of benthic habitats and the characteristics of the offshore region of Kaloko-Honokōhau National Historical Park was available. In 2003, a collaborative project between the U.S. Geological Survey (USGS) Coastal and Marine Geology Program and the National Park Service (NPS) was initiated to develop detailed benthic-habitat classification maps for the marine lands within and adjacent to the park. The intent of this project is to provide baseline maps and a Geographic Information System (GIS) database and description of the biological and geological resources of these marine lands in order to facilitate the management, interpretation, and understanding of park resources. A benthic-habitat classification map was created for the park using existing color aerial photography, Scanning Hydrographic Operational Airborne Lidar Survey (SHOALS) bathymetric data, georeferenced underwater video, and still photography. Individual habitat polygons were classified using five basic attributes: (1) major structure or substrate, (2) dominant structure, (3) major biologic cover on the substrate, (4) percentage of major biological cover, and (5) geographic zone. Additional information regarding geology, morphology, and coral species were also noted.

Hawai'i

Less is more: Less herbicide does more when biological control is present in Pontederia crassipes

An experiment along with simulation modeling was applied to study the combinations of herbicide treatment and biological control that best limit invasive water hyacinth ( Pontederia crassipes , formerly Eichhornia crassipes ) in freshwater aquatic systems. The experiment consisted of 14 different treatments of P. crassipes in 1.67 m 2 outdoor tank mesocosms. Seven treatments were with and seven were without insect biological control agents, Neochetina eichhorniae . In both of the sets of seven treatments, there was one no-herbicide treatment, a one-time full-strength herbicide treatment with 40 %, 80 % and 100 % coverage of the P. crassipes , and a one-time half-strength herbicide treatment with 40 %, 80 %, and 100 % surface area coverage. An overarching hypothesis was that leaving part of a tank unsprayed, providing habitat for the maintenance of biological control agents, would optimize control. Data from the experiment, measured on five days over the 167-day period, were used to calibrate a difference equation model of P. crassipes with and without the biological control agent. The model was then used to project longer term dynamics of the system. The model predicted that an initial one-time herbicide treatment, combined with application of the biocontrol agent at 80 % areal coverage, could maintain P. crassipes at levels lower than the carrying capacity of the plant's biomass over the long term, though not enough that N. eichhorniae would be considered, by itself, a highly effective control. However, the results suggest that a combination of biocontrol with 80 % spraying coverage every 600 days or so would be an effective integrated biocontrol strategy for maintaining decreased P. crassipes biomass at low levels over the long term.

Ecological Modelling

Trace organic contaminants in U.S. national park surface waters: Prevalence and ecological context☆

Surface water samples were collected from 264 sites across 46 U.S national parks during the period of 2009–2019. The number of sites within each park ranged from 1 to 31 and the number of samples collected within each park ranged from 1 to 201. Samples were analyzed for up to 340 trace organic contaminants (TrOCs), including pharmaceuticals, personal care products, pesticides, and various contaminants indicative of anthropogenic influence (e.g., fragrances, surfactants, flame retardants). A total of 155 TrOCs was detected in at least one sample with concentrations ranging from the reporting level of 10 ng/L (multiple contaminants) to 11,900 ng/L (p-cresol). Except for bisphenol A, DEET, theobromine, and gabapentin, TrOCs were detected in <20% of samples. Despite the relatively low detection frequencies, when TrOCs were detected, concentrations were similar to those reported from other regional or national studies. We compared detected concentrations to bioactivity concentrations and water quality benchmarks, when available, to identify occurrences of elevated concentrations and to estimate the potential for biological effects to aquatic biota. Elevated concentrations of 27 TrOCs, mostly pesticides, were detected throughout the study. To gain insight regarding potential sources, we related watershed characteristics (e.g., land cover, presence of point sources) to the number of TrOCs detected at each site. We found that the presence of wastewater treatment plants and the proportion of the watershed classified as agricultural land were the most influential variables for describing the number of pharmaceuticals and the number of pesticides present, respectively. This study represents the largest-scale study characterizing the presence and magnitude of TrOCs in U.S. national park surface waters, to date. These data provide a baseline that can be used to inform future monitoring within the parks and to assess changes in water quality.

Environmental Pollution

The role of wetlands as nearshore habitat in Lake Huron

Wetlands are generally considered to be among the most productive habitats on earth. As the landscape connection between upland and aquatic ecosystems, they posess many of the attributes of both systems and perform functions that extend beyond the wetland boundary into both systems. In Lake Huron, wetlands comprise a small fraction of the total area, but they provide nearshore habitat for many plant and animal species that are deemed important for the lake as a whole. Thus, their role is an important one. In this paper, after describing the general functions and types of wetlands, I will explore the importance of wetland habitat in Lake Huron by defining its extent, describing physical and biological processes, summarizing biological uses, and detailing management problems.

Book chapter

Do non-native plant species affect the shape of productivity-diversity relationships?

The relationship between ecosystem processes and species richness is an active area of research and speculation. Both theoretical and experimental studies have been conducted in numerous ecosystems. One finding of these studies is that the shape of the relationship between productivity and species richness varies considerably among ecosystems and at different spatial scales, though little is known about the relative importance of physical and biological mechanisms causing this variation. Moreover, despite widespread concern about changes in species' global distributions, it remains unclear if and how such large-scale changes may affect this relationship. We present a new conceptual model of how invasive species might modulate relationships between primary production and species richness. We tested this model using long-term data on relationships between aboveground net primary production and species richness in six North American terrestrial ecosystems. We show that primary production and abundance of non-native species are both significant predictors of species richness, though we fail to detect effects of invasion extent on the shapes of the relationship between species richness and primary production.

American Midland Naturalist

An adaptive approach to invasive plant management on U.S. Fish and Wildlife Service-owned native prairies in the Prairie Pothole Region: decision support under uncertainity

Much of the native prairie managed by the U.S. Fish and Wildlife Service (Service) in the Prairie Pothole Region (PPR) is extensively invaded by the introduced cool-season grasses smooth brome (Bromus inermis) and Kentucky bluegrass (Poa pratensis). The central challenge to managers is selecting appropriate management actions in the face of biological and environmental uncertainties. We describe the technical components of a USGS management project, and explain how the components integrate and inform each other, how data feedback from individual cooperators serves to reduce uncertainty across the whole region, and how a successful adaptive management project is coordinated and maintained on a large scale. In partnership with the Service, the U.S. Geological Survey is developing an adaptive decision support framework to assist managers in selecting management actions under uncertainty and maximizing learning from management outcomes. The framework is built around practical constraints faced by refuge managers and includes identification of the management objective and strategies, analysis of uncertainty and construction of competing decision models, monitoring, and mechanisms for model feedback and decision selection. Nineteen Service field stations, spanning four states of the PPR, are participating in the project. They share a common management objective, available management strategies, and biological uncertainties. While the scope is broad, the project interfaces with individual land managers who provide refuge-specific information and receive updated decision guidance that incorporates understanding gained from the collective experience of all cooperators.

Prairie Pothole Region

Biological phosphorus cycling in dryland regions

The relatively few studies done on phosphorus (P) cycling in arid and semiarid lands (drylands) show many factors that distinguish P cycling in drylands from that in more mesic regions. In drylands, most biologically relevant P inputs and losses are from the deposition and loss of dust. Horizontal and vertical redistribution of P is an important process. P is concentrated at the soil surface and thus vulnerable to loss via erosion. High pH and CaCO 3 limit P bioavailability, and low rainfall limits microbe and plant ability to free abiotically bound P via exudates, thus making it available for uptake. Many invasive plants are able to access recalcitrant P more effectively than are native plants. As P availability depends on soil moisture and temperature, climate change is expected to have large impacts on P cycling.

Book chapter

Plant invasions in protected areas of tropical pacific islands, with special reference to Hawaii

Isolated tropical islands are notoriously vulnerable to plant invasions. Serious management for protection of native biodiversity in Hawaii began in the 1970s, arguably at Hawaii Volcanoes National Park. Concerted alien plant management began there in the 1980s and has in a sense become a model for protected areas throughout Hawaii and Pacific Island countries and territories. We review the relative successes of their strategies and touch upon how their experience has been applied elsewhere. Protected areas in Hawaii are fortunate in having relatively good resources for addressing plant invasions, but many invasions remain intractable, and invasions from outside the boundaries continue from a highly globalised society with a penchant for horticultural novelty. There are likely few efforts in most Pacific Islands to combat alien plant invasions in protected areas, but such areas may often have fewer plant invasions as a result of their relative remoteness and/or socio-economic development status. The greatest current needs for protected areas in this region may be for establishment of yet more protected areas, for better resources to combat invasions in Pacific Island countries and territories, for more effective control methods including biological control programme to contain intractable species, and for meaningful efforts to address prevention and early detection of potential new invaders.

Hawaii

Nature's Notebook 2011: Data & participant summary

Introduction The USA National Phenology Network The USA National Phenology Network (USA‐NPN; www.usanpn.org) seeks to engage a diverse range of citizen scientist volunteers, federal, state, and non‐governmental organizations, educators and professional research scientists to collect phenological observations of plants and animals using consistent standards and to contribute their observations to a national data repository. To guide this effort, the USA‐NPN National Coordinating Office (NCO), based in Tucson, Arizona, implemented an online monitoring program for plants and animals, Nature's Notebook , and has developed phenology monitoring protocols and an information management system, which includes the National Phenology Database (NPDb). We are developing a diversity of materials, tools, techniques, and protocols to assist decision making and education related to ecology, wildlife, human health, ecosystem services, natural resource management, biological conservation, and climate change adaptation.

USA-NPN Technical Series

Diet induced differences in carbon isotope fractionation between sirenians and terrestrial ungulates

Carbon isotope differences (??13C) between bioapatite and diet, collagen and diet, and bioapatite and collagen were calculated for four species of sirenians, Dugong dugon (Mu??ller), Trichechus manatus (Linnaeus), Trichechus inunguis (Natterer), and the extinct Hydrodamalis gigas (Zimmerman). Bone and tooth samples were taken from archived materials collected from populations during the mid eighteenth century (H. gigas), between 1978 and 1984 (T. manatus, T. inunguis), and between 1997 and 1999 (D. dugon). Mean ??13C values were compared with those for terrestrial ungulates, carnivores, and six species of carnivorous marine mammals (cetaceans = 1; pinnipeds = 4; mustelids = 1). Significant differences in mean ??13C values among species for all tissue types were detected that separated species or populations foraging on freshwater plants or attached marine macroalgae (??13C values < -6???; ??13Cbioapatite-diet ???14???) from those feeding on marine seagrasses (??13C values > -4???; ??13Cbioapatite-diet ???11???). Likewise, ??13Cbioapatite-collagen values for freshwater and algal-foraging species (???7???) were greater than those for seagrass-foraging species (???5???). Variation in ??13C values calculated between tissues and between tissues and diet among species may relate to the nutritional composition of a species' diet and the extent and type of microbial fermentation that occurs during digestion of different types of plants. These results highlight the complications that can arise when making dietary interpretations without having first determined species-specific ??13Ctissue-diet values. ?? 2007 Springer-Verlag.

Marine Biology

Weed-suppressive bacteria effects differ in culture compared to in soils and with or without microbial competition and separation of active ingredient

Weed-suppressive bacteria (WSB), specifically the D7 and ACK55 strains of Pseudomonas fluorescens , were previously reported to selectively inhibit growth of invasive annual grasses (IAGs) that have caused severe ecosystem degradation across much of the western US. However, recent studies show highly mixed evidence for WSB effectiveness in field settings. We evaluated how the effectiveness of WSB, specifically selective inhibition of exotic annual but not native perennial grasses, was altered by (1) growth media (soil vs. agar culture), (2) pre-sterilization to remove competing microbes, and (3) WSB concentration, reduced by centrifuging with and without filtration. WSB had no effects in soil microcosms with or without pre-sterilization, but WSB did have effects in agar cultures. On agar, WSB effects were amplified by pre-sterilizing seeds prior to treatment with WSB inoculum – but effects were non-selective (i.e., native and exotic plants were equally inhibited) with or without pre-sterilization at high WSB concentration. The only selective effects of WSB were observed on agar at low WSB concentrations, made possible by centrifuging WSB cells out of the inoculum prior to treatment application (from ~10 7 to ~10 5 live cells/ml). Completely removing WSB cells from inoculum by filtration led to no WSB effects. While these results suggest the desired effects of WSB can be reproduced on agar with a supernatant containing the putative active agent and a low density of WSB cells, the effect is still not reproducible for plants in soil, even when competing microbes are removed. Thus, additional research is needed to determine if, when, where, and how WSB could be effective in field settings.

Biological Control

Effects of topoclimatic complexity on the composition of woody plant communities

Topography can create substantial environmental variation at fine spatial scales. Shaped by slope, aspect, hill-position and elevation, topoclimate heterogeneity may increase ecological diversity, and act as a spatial buffer for vegetation responding to climate change. Strong links have been observed between climate heterogeneity and species diversity at broader scales, but the importance of topoclimate for woody vegetation across small spatial extents merits closer examination. We established woody vegetation monitoring plots in mixed evergreen-deciduous woodlands that spanned topoclimate gradients of a topographically heterogeneous landscape in northern California. We investigated the association between the structure of adult and regenerating size classes of woody vegetation and multidimensional topoclimate at a fine scale. We found a significant effect of topoclimate on both single-species distributions and community composition. Effects of topoclimate were evident in the regenerating size class for all dominant species (four Quercus spp. , Umbellularia californica and Pseudotsuga menziesii ) but only in two dominant species ( Quercus agrifolia and Quercus garryana ) for the adult size class. Adult abundance was correlated with water balance parameters (e.g. climatic water deficit) and recruit abundance was correlated with an interaction between the topoclimate parameters and conspecific adult abundance (likely reflecting local seed dispersal). However, in all cases, the topoclimate signal was weak. The magnitude of environmental variation across our study site may be small relative to the tolerance of long-lived woody species. Dispersal limitations, management practices and patchy disturbance regimes also may interact with topoclimate, weakening its influence on woody vegetation distributions. Our study supports the biological relevance of multidimensional topoclimate for mixed woodland communities, but highlights that this relationship might be mediated by interacting factors at local scales.

California

Post-fire recovery of sagebrush-steppe communities is better explained by elevation than climate-derived indicators of resistance and resilience

More landscapes require restoration than can feasibly be treated, and so decision-support tools to prioritize areas for treatment are needed. Moreover, restoration is complicated by the threat of biological invasion in disturbed areas, and so indicators of ecosystem resistance to invasion and resilience to disturbance (hereafter R&R) are important candidate criteria for prioritizing sites for restoration. We asked how climate-based R&R indicators that differed in being either categorical or continuous compared in their ability to explain plant-community recovery after six wildfires that collectively encompassed >750,000 ha and 7803 plot-year observations in sagebrush steppe of the western USA. Unique associations of species that most frequently co-occurred were identified using structural topic modelling. Mixed effect random forests were used to identify the relative importance of various R&R indicators in explaining post-fire plant associations compared with weather, landscape characteristics and treatment history. Simple metrics (elevation, latitude, longitude and year of monitoring) were more informative predictors of post-fire recovery than climate-based R&R indicators. However, small differences in the abundances of perennial grass and especially annual grass associations were predicted by the spring modified Thornthwaite Moisture Index (difference between precipitation and potential evapotranspiration). Synthesis and applications : The convenience of categorical resistance and resilience indicators has led to their widespread adoption for large-scale planning of restoration. Our results reveal that none of the resistance and resilience indicators assessed effectively explained post-fire restoration better than elevation, although a simple continuous resistance and resilience indicator describing water balance performed better than categorical indicators for explaining small but critical differences in cheatgrass association abundances.

California, Idaho, Nevada, Oregon

Long-term tillage and crop rotation effects on residual nitrate in the crop root zone and nitrate accumulation in the intermediate vadose zone

Tillage influences the physical and biological environment of soil. Rotation of crops with a legume affects the soil N status. A furrow irrigated site was investigated for long-term tillage and crop rotation effects on leaching of nitrate from the root zone and accumulation in the intermediate vadose zone (IVZ). The investigated tillage systems were disk-plant (DP), ridge-till (RT) and slot-plant (SP). These tillage treatments have been maintained on the Hastings silt loam (Udic Argiustoll) and Crete silt loam (Pachic Argiustoll) soils since 1976. Continuous corn (CC) and corn soybean (CS) rotations were the subtreatments. Since 1984, soybeans have been grown in CS plots in even calendar years. All tillage treatments received the same N rate. The N rate varied annually depending on the root zone residual N. Soybeans were not fertilized with N-fertilizer. Samples for residual nitrate in the root zone were taken in 8 of the 15 year study while the IVZ was only sampled at the end of the study. In seven of eight years, root zone residual soil nitrate-N levels were greater with DP than RT and SP. Residual nitrate-N amounts were similar in RT and SP in all years. Despite high residual nitrate-N with DP and the same N application rate, crop yields were higher in RT and SP except when DP had an extremely high root zone nitrate level. By applying the same N rates on all tillage treatments, DP may have been fertilized in excess of crop need. Higher residual nitrate-N in DP was most likely due to a combination of increased mineralization with tillage and lower yield compared to RT and SP. Because of higher nitrate availability with DP, the potential for nitrate leaching from the root zone was greater with DP as compared to the RT and SP tillage systems. Spring residual nitrate-N contents of DP were larger than RT and SP in both crop rotations. Ridge till and SP systems had greater nitrate-N with CS than CC rotations. Nitrate accumulation in IVZ at the upstream end of the field was twice as high with DP compared to RT and SP. At the downstream end, it was 2.4 and 1.6 times greater with DP than RT and SP, respectively. Nitrate concentration was greater in the IVZ of DP compared to RT and SP tillage systems. Nitrate accumulations in IVZ of RT and SP were not different. Continuous corn had slightly higher nitrate levels in IVZ than CS. The depth of nitrate penetration at the upstream end was greater than that of the downstream end. Estimated rates of nitrate movement ranged from 0.87 to 0.92 m yr-1 at the upstream end and 0.73 to 0.78 m yr-1 at the downstream end.

Transactions of the American Society of Agricultur

Arctic Refuge coastal plain terrestrial wildlife research summaries

In 1980, when the U.S. Congress enacted the Alaska National Interest Lands Conservation Act (ANILCA), it also mandated a study of the coastal plain of the Arctic National Wildlife Refuge. Section 1002 of ANILCA stated that a comprehensive inventory of fish and wildlife resources would be conducted on 1.5 million acres of the Arctic Refuge coastal plain (1002 Area). Potential petroleum reserves in the 1002 Area were also to be evaluated from surface geological studies and seismic exploration surveys. Results of these studies and recommendations for future management of the Arctic Refuge coastal plain were to be prepared in a report to Congress. In 1987, the Department of the Interior published the Arctic National Wildlife Refuge, Alaska, Coastal Plain Resource Assessment - Report and Recommendations to the Congress of the United States and Final Environmental Impact Statement. This report to Congress identified the potential for oil and gas production (updated* most recently by the U.S. Geological Survey in 2001), described the biological resources, and evaluated the potential adverse effects to fish and wildlife resources. The 1987 report analyzed the potential environmental consequences of five management alternatives for the coastal plain, ranging from wilderness designation to opening the entire area to lease for oil and gas developement. The report's summary recommended opening the 1002 Area to an orderly oil and gas leasing program, but cautioned that adverse effects to some wildlife populations were possible. Congress did not act on this recommendation nor any other alternative for the 1002 Area, and scientists continued studies of key wildlife species and habitats on the coastal plain of the Arctic Refuge and surrounding areas. This report contains updated summaries of those scientific investigations of caribou, muskoxen, predators (grizzly bears, wolves, golden eagles), polar bears, snow geese, and their wildlife habitats. Contributions to this report were made by scientists affiliated with the U.S. Geological Survey; U.S. Fish and Wildlife Service; Alaska Department of Fish and Game; University of Alaska-Fairbanks; Canadian Wildlife Service; Yukon Department of Renewable Resources; and the Northwest Territories Department of Resources, Wildlife, and Economic Development. Sections of the report presenting new information on caribou and forage plants were peer-reviewed by three independent, non-affiliated scientists. The remaining sections summarize previously published peer-reviewed scientific papers and were reviewed by a single independent scientist. The U.S. Geological Survey and the U.S. Fish and Wildlife Service collaborated in the publication of this report.

Alaska, Northwest Territories, Yukon Territory

Extreme CO 2 disturbance and the resilience of soil microbial communities

Carbon capture and storage (CSS) technology has the potential to inadvertently release large quantities of CO 2 through geologic substrates and into surrounding soils and ecosystems. Such a disturbance has the potential to not only alter the structure and function of plant and animal communities, but also soils, soil microbial communities, and the biogeochemical processes they mediate. At Mammoth Mountain, we assessed the soil microbial community response to CO 2 disturbance (derived from volcanic &lsquo;cold&rsquo; CO 2 ) that resulted in localized tree kill; soil CO 2 concentrations in our study area ranged from 0.6% to 60%. Our objectives were to examine how microbial communities and their activities are restructured by extreme CO 2 disturbance, and assess the response of major microbial taxa to the reintroduction of limited plant communities following an extensive period (15&ndash;20 years) with no plants. We found that CO 2 -induced tree kill reduced soil carbon (C) availability along our sampling transect. In response, soil microbial biomass decreased by an order of magnitude from healthy forest to impacted areas. Soil microorganisms were most sensitive to changes in soil organic C, which explained almost 60% of the variation for microbial biomass C (MBC) along the CO 2 gradient. We employed phospholipid fatty acid analysis and quantitative PCR (qPCR) to determine compositional changes among microbial communities in affected areas and found substantial reductions in microbial biomass linked to the loss of soil fungi. In contrast, archaeal populations responded positively to the CO 2 disturbance, presumably due to reduced competition of bacteria and fungi, and perhaps unique adaptations to energy stress. Enzyme activities important in the cycling of soil C, nitrogen (N), and phosphorus (P) declined with increasing CO 2 , though specific activities (per unit MBC) remained stable or increased suggesting functional redundancy among restructured communities. We conclude that both the direct (microaerobiosis) and indirect (loss of plant C inputs) effects of elevated soil CO 2 flux have significant impacts on the composition and overall structural trajectory of soil microbial populations within disturbed areas.

California

Shrub persistence and increased grass mortality in response to drought in dryland systems

Droughts in the southwest United States have led to major forest and grassland die‐off events in recent decades, suggesting plant community and ecosystem shifts are imminent as native perennial grass populations are replaced by shrub‐ and invasive plant‐dominated systems. These patterns are similar to those observed in arid and semiarid systems around the globe, but our ability to predict which species will experience increased drought‐induced mortality in response to climate change remains limited. We investigated meteorological drought‐induced mortality of nine dominant plant species in the Colorado Plateau Desert by experimentally imposing a year‐round 35% precipitation reduction for eight continuous years. We distributed experimental plots across numerous plant, soil, and parent material types, resulting in 40 distinct sites across a 4,500 km 2 region of the Colorado Plateau Desert. For all 8 years, we tracked c. 400 individual plants and evaluated mortality responses to treatments within and across species, and through time. We also examined the influence of abiotic and biotic site factors in driving mortality responses. Overall, high mortality trends were driven by dominant grass species, including Achnatherum hymenoides , Pleuraphis jamesii , and Sporobolus cryptandrus . Responses varied widely from year to year and dominant shrub species were generally resistant to meteorological drought, likely due to their ability to access deeper soil water. Importantly, mortality increased in the presence of invasive species regardless of treatment, and native plant die‐off occurred even under ambient conditions, suggesting that recent climate changes are already negatively impacting dominant species in these systems. Results from this long‐term drought experiment suggest major shifts in community composition and, as a result, ecosystem function. Patterns also show that, across multiple soil and plant community types, native perennial grass species may be replaced by shrubs and invasive annuals in the Colorado Plateau Desert.

Utah