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Complex trophic interactions in kelp forest ecosystems

The distributions and abundances of species and populations change almost continuously. Understanding the processes responsible is perhaps ecology’s most fundamental challenge. Kelp-forest ecosystems in southwest Alaska have undergone several phase shifts between alga- and herbivore-dominated states in recent decades. Overhunting and recovery of sea otters caused the earlier shifts. Studies focusing on these changes demonstrate the importance of top-down forcing processes, a variety of indirect food-web interactions associated with the otter-urchin-kelp trophic cascade, and the role of food-chain length in the coevolution of defense and resistance in plants and their herbivores. This system unexpectedly shifted back to an herbivore-dominated state during the 1990s, because of a sea-otter population collapse that apparently was driven by increased predation by killer whales. Reasons for this change remain uncertain but seem to be linked to the whole-sale collapse of marine mammals in the North Pacific Ocean and southern Bering Sea. We hypothesize that killer whales sequentially "fished down" pinniped and sea-otter populations after their earlier prey, the great whales, were decimated by commercial whaling. The dynamics of kelp forests in southwest Alaska thus appears to have been influenced by an ecological chain reaction that encompassed numerous species and large scales of space and time.

Bulletin of Marine Science

Summer diet of the Peregrine Falcon in faunistically rich and poor zones of Arizona analyzed with capture-recapture modeling

We collected prey remains from 25 Peregrine Falcon ( Falco peregrinus ) territories across Arizona from 1977 to 1988 yielding 58 eyrie-years of data. Along with 793 individual birds (107 species and six additional genera), we found seven mammals and nine insects. In addition, two nestling peregrines were consumed. We found a larger dependence upon White-throated Swifts ( Aeronautes saxatalis ) and birds on migration in northern Arizona, while in southeastern and central Arizona average prey mass was greater and columbiforms formed the largest dietary component. In northern, central, and southeastern Arizona, 74, 66, and 56 avian prey taxa, respectively, were recorded. We used capture-recapture modeling to estimate totals of 111 ± 9.5, 113 ± 10.5, and 86 ± 7.9 (SE) avian taxa taken in these same three areas. These values are counterintuitive inasmuch as the southeast has the richest avifauna. For the entire study area, 156 ± 9.3 avian taxa were estimated to be taken by peregrines.

Arizona

Extreme mortality and reproductive failure of common murres resulting from the northeast Pacific marine heatwave of 2014-2016

About 62,000 dead or dying common murres ( Uria aalge ), the trophically dominant fish-eating seabird of the North Pacific, washed ashore between summer 2015 and spring 2016 on beaches from California to Alaska. Most birds were severely emaciated and, so far, no evidence for anything other than starvation was found to explain this mass mortality. Three-quarters of murres were found in the Gulf of Alaska and the remainder along the West Coast. Studies show that only a fraction of birds that die at sea typically wash ashore, and we estimate that total mortality approached 1 million birds. About two-thirds of murres killed were adults, a substantial blow to breeding populations. Additionally, 22 complete reproductive failures were observed at multiple colonies region-wide during (2015) and after (2016–2017) the mass mortality event. Die-offs and breeding failures occur sporadically in murres, but the magnitude, duration and spatial extent of this die-off, associated with multi-colony and multi-year reproductive failures, is unprecedented and astonishing. These events co-occurred with the most powerful marine heatwave on record that persisted through 2014–2016 and created an enormous volume of ocean water (the “Blob”) from California to Alaska with temperatures that exceeded average by 2–3 standard deviations. Other studies indicate that this prolonged heatwave reduced phytoplankton biomass and restructured zooplankton communities in favor of lower-calorie species, while it simultaneously increased metabolically driven food demands of ectothermic forage fish. In response, forage fish quality and quantity diminished. Similarly, large ectothermic groundfish were thought to have increased their demand for forage fish, resulting in greater top-predator demands for diminished forage fish resources. We hypothesize that these bottom-up and top-down forces created an “ectothermic vise” on forage species leading to their system-wide scarcity and resulting in mass mortality of murres and many other fish, bird and mammal species in the region during 2014–2017.

PLoS ONE

Estimation of population size using open capture-recapture models

One of the most important needs for wildlife managers is an accurate estimate of population size. Yet, for many species, including most marine species and large mammals, accurate and precise estimation of numbers is one of the most difficult of all research challenges. Open-population capture-recapture models have proven useful in many situations to estimate survival probabilities but typically have not been used to estimate population size. We show that open-population models can be used to estimate population size by developing a Horvitz-Thompson-type estimate of population size and an estimator of its variance. Our population size estimate keys on the probability of capture at each trap occasion and therefore is quite general and can be made a function of external covariates measured during the study. Here we define the estimator and investigate its bias, variance, and variance estimator via computer simulation. Computer simulations make extensive use of real data taken from a study of polar bears (Ursus maritimus) in the Beaufort Sea. The population size estimator is shown to be useful because it was negligibly biased in all situations studied. The variance estimator is shown to be useful in all situations, but caution is warranted in cases of extreme capture heterogeneity.

Journal of Agricultural, Biological, and Environme

Reproductive characteristics of female sea otters

Several important aspects of reproduction in the female sea otter, such as gestation, pupping frequency, period of pup dependency, and annual pupping rate, were unclear when this study was begun. We present data from 75 tagged adult females that indicate gestation is variable, but on average is about 6 months, the length of pup dependency is 6 mo, thus the pupping interval is usually 12–13 mo. Most females breed for the first time in their fifth year of life. About 85–90% of adult females pup in a given year.

Alaska, California

Maybe so, maybe not: Canis lepophagus at Hagerman Fossil Beds National Monument, Idaho, USA

A canid dentary is described from the Pliocene Glenns Ferry Formation at Hagerman Fossil Beds National Monument, south-central Idaho, USA. The specimen possesses traits in alliance with and measurements falling within or exceeding those of Canis lepophagus . The dentary, along with a tarsal IV (cuboid) and an exploded canine come from the base of the fossiliferous Sahara complex within the monument. Improved geochronologic control provided by new tephrochronologic mapping by the U.S. Geological Survey-National Park Service Hagerman Paleontology, Environments, and Tephrochronology Project supports an interpolated age of approximately 3.9 Ma, placing it in the early Blancan North American Land Mammal Age. It is conservatively referred to herein as Canis aff. C . lepophagus with the caveat that it is an early and robust example of that species. A smaller canid, initially assigned to Canis lepophagus and then to Canis ferox , is also known from Hagerman. Most specimens of Canis ferox , including the holotype, were recently reassigned to Eucyon ferox , but specimens from the Hagerman and Rexroad faunas were left as Canis sp. and possibly attributed to C . lepophagus. We agree that these smaller canids belong in Canis and not Eucyon but reject placing them within C . lepophagus ; we refer to them here as Hagerman-Rexroad Canis . This study confirms the presence of two approximately coyote-sized canids at Hagerman and adds to the growing list of carnivorans now known from these fossil beds.

Idaho

Lesions and behavior associated with forced copulation of juvenile Pacific harbor seals (Phoca vitulina richardsi) by southern sea otters (Enhydra lutris nereis)

Nineteen occurrences of interspecific sexual behavior between male southern sea otters ( Enhydra lutris nereis ) and juvenile Pacific harbor seals ( Phoca vitulina richardsi ) were reported in Monterey Bay, California, between 2000 and 2002. At least three different male sea otters were observed harassing, dragging, guarding, and copulating with harbor seals for up to 7 d postmortem. Carcasses of 15 juvenile harbor seals were recovered, and seven were necropsied in detail by a veterinary pathologist. Necropsy findings from two female sea otters that were recovered dead from male sea otters exhibiting similar behavior are also presented to facilitate a comparison of lesions. The most frequent lesions included superficial skin lacerations; hemorrhage around the nose, eyes, flippers, and perineum; and traumatic corneal erosions or ulcers. The harbor seals sustained severe genital trauma, ranging from vaginal perforation to vagino-cervical transection, and colorectal perforations as a result of penile penetration. One harbor seal developed severe pneumoperitoneum subsequent to vaginal perforation, which was also observed in both female sea otters and has been reported as a postcoital lesion in humans. This study represents the first description of lesions resulting from forced copulation of harbor seals by sea otters and is also the first report of pneumoperitoneum secondary to forced copulation in a nonhuman animal. Possible explanations for this behavior are discussed in the context of sea otter biology and population demographics.

California

Habitat diversity influences puma (Puma concolor) diet in the Chihuahuan Desert

Habitat heterogeneity and corresponding diversity in potential prey species should increase the diet breadth of generalist predators. Many previous studies describing puma Puma concolor diets in the arid regions of the southwestern United States were focused within largely xeric locations, overlooking the influence of heterogeneity created by riparian forests. Such habitat heterogeneity and corresponding prey diversity could influence prey availability and puma diet composition. We examined seasonal prey composition of pumas occupying areas with different habitat conditions representing riparian areas adjacent to the Rio Grande and xeric Chihuahuan Desert uplands in southern New Mexico. We collected prey composition data from 686 kill sites made by 17 (9 males and 8 females) GPS-collared pumas from 2014 to 2018. Diet composition included 32 different avian, aquatic, small mammal, and ungulate prey species. Prey composition varied, with more ungulate prey consumed by pumas inhabiting the upland desert areas and more aquatic prey consumed in the riparian bosque. Prey composition differed between seasons, with ungulate prey decreasing and aquatic prey increasing during the hot–dry season. Prey composition also varied between puma sex and habitat with females in the desert uplands consuming more small mammals than either males or females in riparian areas. The diverse diets of the pumas inhabiting the heterogeneous landscapes in southern New Mexico provide additional evidence that pumas have broad diets that are strongly influenced by the habitat and prey community that their home range encompasses.

New Mexico

History of Imuruk Lake, Seward Peninsula, Alaska

A study of Imuruk Lake, a large, shallow lake in north-central Seward Peninsula, Alaska, illuminates the climatic history of northwestern Alaska and the tectonic history of central Seward Peninsula during Pleistocene and Recent time. Special interest attaches to the older lake sediments, because they contain evidence concerning the climate, fauna, and flora that existed in the vicinity of Bering Strait at a time when the Bering land bridge was open and when animal and plant populations were being exchanged between the eastern and western hemispheres. The lake is 8 miles long and less than 10 feet deep; bottom sediments consisting of reworked wind-blown silt bury a rolling bedrock topography of much greater relief. Analysis of the hydrologic regime indicates that much of the water draining into the lake is lost by evaporation; smaller quantities are lost by discharge through the outlet, the Kugruk River, and by leakage into the lava flows along the lake shore. Changes in the duration and temperature of the summer ice-free season would result in changes in the amount of water lost by evaporation and thus in appreciable changes in lake level. Imuruk Lake occupies an initial low area on basaltic lava flows of Quaternary age, but the initial low area has been modified by faulting and now lies in a poorly defined graben. Topographic evidence confirmed by study of lacustrine terraces indicates that until recently Imuruk Lake drained westward into the Noxapaga River instead of eastward into the Kugruk River. A history of repeated warping of the lake basin, on which is superimposed a history of oscillating lake level which is due to changes in climate, is recorded by three systems of abandoned shore-line features found along the shores: a warped shore cliff of probable Illinoian age, a double set of warped terraces of probable Wisconsin age, and a low, horizontal terrace of Recent age. Bones of bison, horse, and mammoth were found in peaty sediments containing many twigs but no large wood; their presence indicates that these mammals, at least, were capable of surviving in a tundra environment during cold stages of the Pleistocene epoch and at a time when the Bering land bridge was in existence nearby. The sediments filling the deeper parts of the bedrock basin of Imuruk Lake probably contain an uninterrupted pollen record that reflects vegetation changes in central Seward Peninsula beginning in middle Illinoian time and terminating a few thousand years ago. Core drilling and pollen analysis of these sediments would greatly amplify our understanding of late Pleistocene events in the vicinity of the Bering land bridge.

Alaska

Vascular Plant and Vertebrate Inventory of Organ Pipe Cactus National Monument

Executive Summary We summarized inventory and monitoring efforts for plants and vertebrates at Organ Pipe Cactus National Monument (NM) in Arizona. We used data from previous research to compile complete species lists for the monument and to assess inventory completeness. There have been 1,031 species of plants and vertebrates observed at the monument. Most of the species on the list are documented by voucher specimens. There are 59 non-native species established in the monument: one mammal, three birds, and 55 non-native plants. Most non-native plant species were first recorded along roads. In each taxon-specific chapter, we highlight areas that contribute disproportionately to species richness or that have unique species for the monument. Of particular importance are Quitobaquito Springs and Pond, which are responsible for the monument having one of the highest number of bird species in the Sonoran Desert Network of parks. Quitobaquito also contains the only fish in the monument, the endangered Quitobaquito pupfish (Cyprinodon eremus). Other important resources for the plants and vertebrates include the xeroriparian washes (e.g., Alamo Canyon) and the Ajo Mountains. Based on the review of past studies, we believe the inventories of vascular plants and vertebrates are nearly complete and that the monument has one of the most complete inventories of any unit in the Sonoran Desert Network.

Open-File Report

A new species of small-eared shrew in the Cryptotis thomasi species group from Costa Rica (Mammalia: Eulipotyphla: Soricidae)

We describe a new species of small-eared shrew, genus Cryptotis Pomel, 1848 (Eulipotyphla: Soricidae), from near the community of Monteverde in the Tilarán highlands of northwestern Costa Rica. The new species is immediately distinguished from all other Costa Rican shrews its large size and long tail. Morphologically, it belongs to the Cryptotis thomasi group of small-eared shrews, a clade that is more typically distributed in the Andes Cordillera and other highland regions of northern South America. The new Costa Rican species and the Panamanian endemic Cryptotis endersi Setzer, 1950 are the only two members of this species group known to occur in Central America. Like most other members of the C. thomasi group for which the postcranial skeleton has been studied, the new species tends be more ambulatory (rather than semi-fossorial) when compared with other members of the genus. Our survey efforts over several decades failed to locate a population of the new species, and we discuss its conservation status in light of its limited potential distribution in the Tilarán highlands and the significant climatic change that has been documented in the Monteverde region during the past four decades.

Mammal Research

Measuring adrenal and reproductive hormones in hair from southern Beaufort Sea polar bears (Ursus maritimus)

Polar bears ( Ursus maritimus ) use sea ice to access marine mammal prey. In Alaska’s Southern Beaufort Sea, the declining availability of sea ice habitat in summer and fall has reduced opportunities for polar bears to routinely hunt on the ice for seals, their primary prey. This reduced access to prey may result in physiological stress with subsequent potential consequences to reproductive function (physiological changes that accompany reproduction), which can be measured via reproductive hormones. Hormone concentrations in hair can be used as a minimally invasive alternative to serum concentrations, which must come from animal captures. Hair samples also provide a long-term average measurement of hormone concentrations that is not influenced by short-term fluctuations like that of serum. The aim of this study was (1) to determine if a radioimmunoassay could be used to measure adrenal and reproductive hormones in polar bear hair, and (2) to determine what the relationship is between these hormones and other reproductive, condition, and demographic parameters of polar bears. We successfully validated this method for cortisol, progesterone, estradiol, and testosterone through the analysis of hair and serum of 141 free-ranging polar bears. We found that while hair cannot be used to estimate serum hormone concentrations during the breeding season, hormone concentrations in hair can be used to measure reproductive function in polar bears. Further, our findings support trends in previous studies measuring hormone concentrations in serum. We found that adrenal and some reproductive hormones were positively correlated in hair samples of females. Associations between hormone concentrations in hair and serum did not vary relative to reproductive status of adult females. Serum testosterone increased throughout the breeding season for adult males and was significantly associated with body mass index (BMI). Our research supports the use of hair as a measure of reproductive function in polar bears and allows us to monitor the future effects of climate change on polar bear physiology.

Alaska, Yukon

Hyperspectral analysis of rocky surfaces on the Earth and other planetary systems: Chapter 27

This book is focused on studies of vegetation on Earth using hyperspectral remote sensing methods. However, it is appropriate to extend the application of these methods out to other rocky bodies in our Solar System for a variety of reasons. First, minerals, soils, and rocks form the substrate on which vegetation grows on Earth. Compositional analyses of these components with hyperspectral data provide essential background information for distinguishing, identifying, and removing their effects on vegetation spectra. Second, variation in distribution, chemical and physical properties among soil and rock, has been demonstrated to have a significant effect on factors such as moisture retention, dust production, and the presence and distribution of biological species ranging from bacteria, fungi, grasses, shrubs, trees, and small mammals to humans [1]. These factors in turn can have profound influences on human health.

Book chapter

Vertebrates in trade that pose high invasion risk to the United States

The United States imports thousands of live vertebrate species annually as part of legal trade. Escapes and releases from captivity are major pathways of invasion, however, the risk posed by the thousands of imported vertebrate species has not been systematically assessed. We conducted a horizon scan that used a data-driven climate match to filter a list of nearly 15,000 taxa drawn from across the globe of imported fish, amphibians, reptiles, birds, and mammals for rapid assessment by taxonomic experts. Experts evaluated 840 species and identified 32 (22 reptiles and 10 fishes) as having the highest risk for establishment, spread, and negative impacts. Of those high-risk species, the majority have the capacity to disrupt ecosystem processes via their role as top predators or the unique ecological niches that they occupy, while several of the snake species pose a threat to human health. High-risk species were often scored with high confidence while in contrast, low scores were attributed to a combination of ecological redundancy, low propagule pressure, or low climate match while low confidence arose from a lack of information in the literature (i.e., data deficiency). Our study therefore highlights legally imported species likely to cause the greatest harm with the recognition that many other species could also become invasive in the United States. The ranked list of vertebrate threats can be used to prioritize watchlists and inform the development of targeted regulations for importation can be applied to regions to provide a rapid, preliminary screening for large pools of potential invaders.

Biological Conservation

An evaluation of the science needs to inform decisions on Outer Continental Shelf energy development in the Chukchi and Beaufort Seas, Alaska

The U. S. Geological Survey (USGS) was asked to conduct an initial, independent evaluation of the science needs that would inform the Administration's consideration of the right places and the right ways in which to develop oil and gas resources in the Arctic Outer Continental Shelf (OCS), particularly focused on the Beaufort and Chukchi Seas. Oil and gas potential is significant in Arctic Alaska. Beyond petroleum potential, this region supports unique fish and wildlife resources and ecosystems, and indigenous people who rely on these resources for subsistence. This report summarizes key existing scientific information and provides initial guidance of what new and (or) continued research could inform decision making. This report is presented in a series of topical chapters and various appendixes each written by a subset of the USGS OCS Team based on their areas of expertise. Three chapters (Chapters 2, 3, and 4) provide foundational information on geology; ecology and subsistence; and climate settings important to understanding the conditions pertinent to development in the Arctic OCS. These chapters are followed by three chapters that examine the scientific understanding, science gaps, and science sufficiency questions regarding oil-spill risk, response, and impact (Chapter 5), marine mammals and anthropogenic noise (Chapter 6), and cumulative impacts (Chapter 7). Lessons learned from the 1989 Exxon Valdez Oil Spill are included to identify valuable "pre-positioned" science and scientific approaches to improved response and reduced uncertainty in damage assessment and restoration efforts (appendix D). An appendix on Structured Decision Making (appendix C) is included to illustrate the value of such tools that go beyond, but incorporate, science in looking at what can/should be done about policy and implementation of Arctic development. The report provides a series of findings and recommendations for consideration developed during the independent examination of science gaps and sufficiency. These recommendations are important for understanding what the USGS discovered in the course of this study and to help inform and improve decision making.

Circular

Etologia aplicada al manejo de especies amenazadas: el caso del turon de patas negras (Mustela nigripes)

Los turones de patas negras (Mustela nigripes) son considerados como uno de los mamíferos más amenazados del mundo. La última población silvestre fue descubierta en 1981 en Meeteetse, Wyoming, y en 1985 se extinguió debido a una epidemia de moquillo canino en combinacion con una epidemia de peste bubónica. Antes de su extinción total en la naturaleza, se lograron capturar 18 individuos para comenzar un programa de cría. La cría en cautividad se ha llevado a cabo con éxito y, durante los últimos 11 años han nacido más de 2600 turones en centros de propagación. Desde 1991, aproximadamente 870 turones han sido reintroducidos en 5 áreas de distribución histórica original repartidas entre los estados de Wyoming, Montana, Dakota del Sur, y Arizona. La investigación científica ha sido, y continúa siendo, una herramienta crítica para dirigir el Programa de Recuperación. Los estudios etológicos llevados a cabo tanto con turones cautivos como con turones reintroducidos han demostrado que un entorno cautivo naturalístico, especialmente durante las etapas iniciales del desarrollo de estos carnívoros, ayuda a desarrollar conductas necesarias para la supervivencia en la naturaleza. Dicho entorno ayuda a los turones a refinar sus técnicas de caza, a reconocer las madrigueras de los perritos de la pradera como un refugio donde establecerse y como una vía de escape frente al acoso de depredadores, y a mejorar su forma física. A raíz de estos estudios, se han readaptado las técnicas de manejo de turones cautivos para ayudar a llevar a cabo la recuperación de esta especie de un modo más eficaz y rentable. Black-footed ferrets are considered one of the world's most endangered mammals. The last wild population was discovered in 1981 in Meteetsee, Wyoming, and, in 1985 it collapsed due to an epizootic of canine distemper in combination with sylvatic plague. Prior to the extinction of the last remnant population, 18 wild black-footed ferrets were captured to initiate captive propagation efforts. Captive breeding has been successful and, during the last 11 years, more than 2600 black-footed ferrets have been born in captive breeding centers. Since 1991, approximately 870 ferrets have been reintroduced in 5 areas located within the ferret's original geographic distribution, including sites in Wyoming, Montana, South Dakota, and Arizona. Scientific research has been, and continues to be, a critical tool to direct recovery efforts. Studies in applied ethology conducted on captive and reintroduced ferret populations have demonstrated that a naturalistic captive environment, particularly during early developmental periods, enhances the expression of behaviors necessary for survival in nature. Ferrets raised in a naturalistic environment develop better predatory skills, are able to recognize prairie dog burrows as a home and shelter from predators, and are more physically fit. Results from these studies have been adapted into management strategies to help implement a more cost-effective road to black-footed ferret recovery.

Etologia

The influence of human presence and footprint on animal space use in US national parks

Given the importance of protected areas for biodiversity, the growth of visitation to many areas has raised concerns about the effects of humans on wildlife. In 2020, the COVID-19 pandemic led to temporary closure of national parks in the United States, offering a pseudonatural experiment to tease apart the effects of permanent infrastructure and transient human presence on animals. We compiled GPS tracking data from 229 individuals of 10 mammal species in 14 parks and used third-order hierarchical resource selection functions to evaluate the influence of the human footprint on animal space use in 2019 and 2020. Averaged across all parks and species, animals avoided the human footprint, whether the park was open or closed. However, although animals in remote areas showed consistent avoidance, on average those in more developed areas switched from avoidance to selection when protected areas were closed. Findings varied across species: some responded consistently negatively to the footprint (wolves, mountain goats), some positively (mule deer, red fox) and others had a strong exposure-mediated response (elk, mountain lion). Furthermore, some species responded more strongly to the park closure (black bear, moose). This study advances our understanding of complex interactions between recreation and wildlife in protected areas.

western United States

Comparative demography of sea otter populations

Population trends are poorly documented and demographic information is typically lacking for many carnivorous mammals. The sea otter ( Enhydru lutris ) has a well known history of decline and recovery, and while many other species have declined as precipitously, few have recovered so spectacularly. Generally speaking, northern populations (remnants within the range of E. l. lutris and E. l. kenyoni ) have recovered at high rates while recovery of the southern sea olter ( E. I. nereis ), which is listed as legally threatened under the Endangered Species Act (ESA), has progressed more slowly. Our purpose is to contrast trends in abundance and demographic patterns between Southern California and northern (Washington, British Columbia, Alaska, and Asia) sea otter populations. Specifically, we provide (1) a brief review of the main findings to date: (2) a summary of ongoing and planned studies; and (3) recommendations for future research. A more detailed account of these and other issues concerning the conservation and management of sea otters is provided in the U.S. Fish and Wildlife Service's Recovery Plan for the Califomia Sea Otter (U.S. Fish and Wildlife Service 1996).

Endangered Species UPDATE