Geology ReportsSearch

SEARCH · Geology Reports

Results for “Wildlife Research”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 469 records · Page 26Linked to original sources

Conservation of northwestern and southwestern pond turtles: Threats, population size estimates, and population viability analysis

Accurate status assessments of long-lived, widely distributed taxa depend on the availability of long-term monitoring data from multiple populations. However, monitoring populations across large temporal and spatial scales is often beyond the scope of any one researcher or research group. Consequently, wildlife managers may be tasked with utilizing limited information from different sources to detect range-wide evidence of population declines and their causes. When assessments need to be made under such constraints, the research and management communities must determine how to extrapolate from variable population data to species-level inferences. Here, using three different approaches, we integrate and analyze data from the peer-reviewed literature and government agency reports to inform conservation for northwestern pond turtles (NPT) Actinemys marmorata and southwestern pond turtles (SPT) Actinemys pallida . Both NPT and SPT are long-lived freshwater turtles distributed along the west coast of the United States and Mexico. Conservation concerns exist for both species; however, SPT may face more severe threats and are thought to exist at lower densities throughout their range than NPT. For each species, we ranked the impacts of 13 potential threats, estimated population sizes, and modeled population viability with and without long-term droughts. Our results suggest that predation of hatchlings by invasive predators, such as American bullfrogs Lithobates catesbeianus and Largemouth Bass Micropterus salmoides, is a high-ranking threat for NPT and SPT. Southwestern pond turtles may also face more severe impacts associated with natural disasters (droughts, wildfires, and floods) than do NPT. Population size estimates from trapping surveys indicate that SPT have smaller population sizes on average than do NPT ( P = 0.0003), suggesting they may be at greater risk of local extirpation. Population viability analysis models revealed that long-term droughts are a key environmental parameter; as the frequency of severe droughts increases with climate change, the likelihood of population recovery decreases, especially when census sizes are low. Given current population trends and vulnerability to natural disasters throughout their range, we suggest that conservation and recovery actions first focus on SPT to prevent further population declines.

Journal of Fish and Wildlife Management

A compilation pipeline for wildlife tracking datasets collected from ground-based and satellite-based telemetry transmission devices

Wildlife conservation planning increasingly requires collaboration and integration of research from discrete studies spanning large geographic areas. Tracking datasets are essential for analyzing animal movements and species distributions in relation to environmental conditions and combining them can enable powerful analyses to further aid planning efforts. However, combining datasets necessitates addressing variation in study designs, tracking methodologies, location uncertainty, and data attributes. We outline a compilation pipeline to integrate ground-based and satellite-based telemetry tracking datasets, motivated from our work with greater sage-grouse ( Centrocercus urophasianus ), a highly imperiled species of western North America. Our objective was to create a database with a standardized set of attributes to facilitate filtering locations for spatial analyses. Our pipeline phases are: (1) dataset pre-processing, (2) formatting individual datasets to a common template, (3) dataset binding, (4) error checking, and (5) filtering. Our pipeline includes additional functionality to identify coordinates from recurrently visited locations (e.g., nest sites), which may be of special interest. The final compiled sage-grouse database included nearly 5 million locations collected from 53 datasets and over 19,000 birds tracked from 1980 to 2022, including over 11,000 nest locations. Our error checks flagged 3.9 % of locations as likely errors, predominantly collected from satellite-based telemetry transmissions. We demonstrate the ability of our pipeline to identify nest locations and flag erroneous locations by applying it to simulated tracking datasets. Overall, our workflow offers a transferable approach for researchers aiming to standardize wildlife telemetry datasets and conduct ecological analyses for both individual studies and large-scale collaborations.

California, Colorado, Idaho, Montana, Nevada, Nort

A comprehensive list and photographic collection of the vascular flora of Caddo Lake National Wildlife Refuge, Texas, March 2011-March 2012

A floristics inventory was conducted to identify and photograph the vascular plants occurring at Caddo Lake National Wildlife Refuge (NWR), Texas, from March 2011 to March 2012 by the U.S. Geological Survey in cooperation with the U.S. Fish and Wildlife Service. This research resulted in the identification of 511 taxa of vascular plants representing 111 families and 317 genera. Despite the degree of development of the refuge at the time it was transferred to the U.S. Fish and Wildlife Service, plant diversity was high. Of the 511 species identified in this study, 346 species are new records for Harrison County, and 3 species are new discoveries for Texas. Caddo Lake NWR is primarily forested with 55 tree species and 35 shrub species identified in this study. Of the species identified, 289 are associated with wetlands having a wetland classification of facultative or wetter, possibly reflecting the proximity of Caddo Lake to the refuge and the three streams that intersect the refuge. Sixty-two of the species found on the refuge are introduced. Chinese tallow tree ( Triadica sebifera ) is one of the more common invasive tree species on the refuge and is actively controlled by refuge staff. Chinese privet ( Ligustrum sinense ), sacred bamboo ( Nandina domestica ), and King’s Ranch bluestem ( Bothriochloa ischaemum var. songarica ) are present on the refuge and have the potential to become invasive. More than 10,000 photographs were taken of the plants found on the refuge in an effort to document general appearance and capture diagnostic characters of each plant species. Photographs were also taken of many of the animals and landscapes encountered during the project. Select images of each of the plants and animals are included in the collection of more than 1,600 photographs (all photographs by Larry Allain).

Texas

Is your bird feeder safe?

Bird feeding is a popular activity for millions of Americans. Some of our favorite bird species commonly visit bird feeders and these stations may be an important factor in their well-being during some segments of their life-cycle. However, poorly maintained feeding stations may contribute to the occurrence of infectious disease and mortality. In recent years there have been unprecedented reports of songbird mortality events and the occurrence of a previously unreported disease in songbirds. The National Wildlife Health Center of the U.S. Geological Survey conducts research on diseases in wildlife, their causes, and means of preventing or reducing disease outbreaks.

Bird Conservation

Wildlife and oil shale: a problem analysis and research program: volume 2, appendix and bibliography

This appendix is designed to apply to the program of studies recommended in the problem analysis and research program Volume I. It has two purposes: (1) to provide reference that may be used in the preparation of requests for proposals or for studies, and (2) to suggest a core group of references for a reference library for research. The references that follow are listed taxonomically as follows: A. Aquatic Ecosystems B. Water Quality C. Terrestrial Ecosystems D. Industrial Impacts on Wildlife E. Reptiles and Amphibians F. Blood-sucking Arthropods and Disease Vectors This bibliography is not integrated because it was believed that it would be more useful with the sources separate. It also does not attempt to cover the entire field. It is, however, a listing that will be most useful in the description of the region and its environmental processes.

FWS/OBS

Development and evaluation of the remote passive integrated transponder tag reader for customizable monitoring of wildlife

Increasing the quantity and quality of mark-reencounter data can be important when individual identification data are needed to address research or management questions. Physical recapture methods tend to be labor-intensive and therefore expensive, while remote detection methods are not easily applied to all taxa or are proprietary and thus difficult to customize. However, partnerships between wildlife scientists and engineers have the potential to provide innovative solutions that improve data collection while reducing costs. We describe a collaborative effort to improve the collection of mark-reencounter data on an invasive reptile, the brown treesnake ( Boiga irregularis ). In laboratory trials conducted on Guåhan (CHamoru; Guam in English) in 2021, we assessed the feasibility of detecting snakes fitted with passive integrated transponder (PIT) tags using customized remote PIT-tag readers (RePTaR) paired with baited snake traps. We evaluated differences in scanning success as a function of snake traits, location of PIT tags within snakes, and the distance of the PIT tag from the reader. We successfully scanned all individuals, on average 529 times but ranging from 3 to 6,436 times, during 12-hour trials using a designed customizable RePTaR unit. Snake characteristics and marking location explained little of the variability in scanning success, with distance from the reader as the best-supported covariate. By building cross-disciplinary partnerships, we can develop customizable technological solutions and provide additional tools with which to address challenges in wildlife research and management.

Guam

Elk personality and anthropogenic food subsidy: Managing conflict and migration loss

The continued decline of long-distance ungulate migrations threatens to decouple important ecological processes that increase biodiversity and wildlife abundance. Past research has focused on preserving migration paths where habitat fragmentation and loss disrupt movement corridors. However, shifting residency-migration trade-offs are the stronger driver of migration loss in some populations. Suburban residential developments may provide ungulates with anthropogenic food sources and refuge from predators, which can increase population growth among short-distance migrants relative to long-distance migrants. This trend can increase wildlife vehicle collisions and other human–wildlife conflicts while simultaneously reducing hunting opportunities. Yet, individual animals vary in their tolerance of human disturbance. We investigated how interindividual variation relative to conflict and human habituation influences elk migration and space use on shared winter range. We used a clustering algorithm applied to GPS collar data to identify elk use of anthropogenic food resources in suburban habitat. Cluster locations identified all known anthropogenic subsidy locations during the study period. Elk that used suburban anthropogenic food sources also migrated 60% shorter distances between summer and winter ranges than elk with no known use of these food subsidies. Elk use of protected wintering grounds was spatially structured such that conflict-prone, short-distance migrants disproportionately used areas with more human activity. Clustering algorithms applied to GPS collar data may allow managers to identify foci of concentrated use that generates human–wildlife conflict, and where prion deposition and environmental contamination facilitate the spread of chronic wasting disease, particularly in suburban areas with anthropogenic food subsidies. The apparent spatial structuring of shared winter range according to the conflict potential and migration strategy of individual elk may also permit managers to assess relative recruitment among cryptic population segments using different migration strategies and facilitate targeted, adaptive management actions. These associations between conflict, human habituation, and migration shed light on the urbanization of wildlife species, inform efforts to manage human–wildlife conflict and disease spread, and emphasize that a multipronged approach beyond maintaining habitat corridors may be necessary to conserve long-distance migrations for species that can become human-habituated.

Wyoming

Results of a survey of U.S. Fish and Wildlife Service Endangered Species and Ecological Services Field Offices, Refuges, Hatcheries, and Research Centers

The National Ecology Research Center (Center), as part of an ongoing research study on the effects of low altitude aircraft operations on fish and wildlife, conducted a survey in January 1987 of all U.S. Fish and Wildlife Service (Service) regional directors, research center directors, Ecological Services and Endangered Species field offices supervisors, refuge manager, and hatchery manager. The objective of the survey was to determine the nature and extent of aircraft-induced impacts on fish and wildlife species, populations, and habitat utilization. The field installation managers and biologists were asked to provide background information or data on fish and wildlife reactions to low-altitude aircraft disturbances, including physiological, behavioral, and reproductive/population effects. Specifically, the survey asked for information such as: (1) observations of animal reaction(s) to aircraft operations, e.g., desert bighorn sheep scare behavior in response to aircraft overflights and hatchery fish seizures and death following intense sonic booms; and instances of areas where aircraft noise is known or believed to be responsible for reduced population size, e.g. areas along heavily used aircraft flight corridors where breeding waterfowl densities are lower than in similar habitat away from the noise area.

Report

Habitat connectivity and host relatedness influence virus spread across an urbanising landscape in a fragmentation-sensitive carnivore

Spatially heterogeneous landscape factors such as urbanisation can have substantial effects on the severity and spread of wildlife diseases. However, research linking patterns of pathogen transmission to landscape features remains rare. Using a combination of phylogeographic and machine learning approaches, we tested the influence of landscape and host factors on feline immunodeficiency virus (FIV Lru ) genetic variation and spread among bobcats ( Lynx rufus ) sampled from coastal southern California. We found evidence for increased rates of FIV Lru lineage spread through areas of higher vegetation density. Furthermore, single-nucleotide polymorphism (SNP) variation among FIV Lru sequences was associated with host genetic distances and geographic location, with FIV Lru genetic discontinuities precisely correlating with known urban barriers to host dispersal. An effect of forest land cover on FIV Lru SNP variation was likely attributable to host population structure and differences in forest land cover between different populations. Taken together, these results suggest that the spread of FIV Lru is constrained by large-scale urban barriers to host movement. Although urbanisation at fine spatial scales did not appear to directly influence virus transmission or spread, we found evidence that viruses transmit and spread more quickly through areas containing higher proportions of natural habitat. These multiple lines of evidence demonstrate how urbanisation can change patterns of contact-dependent pathogen transmission and provide insights into how continued urban development may influence the incidence and management of wildlife disease.

California

Using role analysis to plan for stakeholder involvement: a Wyoming case study

Prior to implementing laws and policies regulating water, wildlife, wetlands, endangered species, and recreation, natural resource managers often solicit public input. Concomitantly, managers are continually seeking more effective ways to involve stakeholders. In the autumn of 1999, the Wyoming Game and Fish Department sought to develop a state management plan for its portion of the Yellowstone grizzly bear (Ursus arctos horribilis) population if it was removed from the federal threatened species list. A key aspect of developing this plan was the involvement of federal, state, and local agencies, representatives from nongovernmental organizations, and citizens. Wyoming wildlife managers asked researchers from the United States Geological Survey to demonstrate how the Legal-Institutional Analysis Model could be used to initiate this process. To address these needs, we conducted similar workshops for a group of state and federal managers or staffers and a broad group of stakeholders. Although we found similarities among the workshop groups, we also recorded differences in perspective between stakeholder groups. The managers group acknowledged the importance of varied stakeholders but viewed the grizzly bear planning process as one centered on state interests, influenced by state policies, and amenable to negotiation. The other workshops identified many stakeholders and viewed the decision process as diffuse, with many opportunities for entry into the process. These latter groups were less certain about the chance for a successful negotiation. We concluded that if these assumptions and differences were not reconciled, the public involvement effort was not likely to succeed.

Wildlife Society Bulletin

Wild-harvested venison yields and sharing by Michigan deer hunters

An increased societal focus on wildlife as food and recent policy deliberations regarding legal markets for wild-harvested meat are encouraging wildlife managers and researchers to examine the amount, use, and distribution of meat yielded through recreational hunting. We used responses to questions on the Michigan Deer Harvest Study to estimate the maximum yield of edible venison and assess hunters’ sharing behaviors. We estimated 11,402–14,473 metric tons of edible venison were procured during the 2013 hunting season. Of hunters who harvested a deer, 85% shared their venison. Hunters who shared did so with an average of 5.6 people (SD = 4.5). Sharing occurred most frequently within tight social networks: members of hunters’ households (69%), relatives (52%), and friends, neighbors, or coworkers (50%). In the absence of legal markets, venison is distributed widely by hunters and greatly amplifies the number of people benefiting from hunting. Nonetheless, we also identified the potential breadth of exposure to disease or contaminants from wild-harvested meat.

Human Dimensions of Wildlife

An improved procedure for detection and enumeration of walrus signatures in airborne thermal imagery

In recent years, application of remote sensing to marine mammal surveys has been a promising area of investigation for wildlife managers and researchers. In April 2006, the United States and Russia conducted an aerial survey of Pacific walrus (Odobenus rosmarus divergens) using thermal infrared sensors to detect groups of animals resting on pack ice in the Bering Sea. The goal of this survey was to estimate the size of the Pacific walrus population. An initial analysis of the U.S. data using previously-established methods resulted in lower detectability of walrus groups in the imagery and higher variability in calibration models than was expected based on pilot studies. This paper describes an improved procedure for detection and enumeration of walrus groups in airborne thermal imagery. Thermal images were first subdivided into smaller 200 x 200 pixel "tiles." We calculated three statistics to represent characteristics of walrus signatures from the temperature histogram for each the. Tiles that exhibited one or more of these characteristics were examined further to determine if walrus signatures were present. We used cluster analysis on tiles that contained walrus signatures to determine which pixels belonged to each group. We then calculated a thermal index value for each walrus group in the imagery and used generalized linear models to estimate detection functions (the probability of a group having a positive index value) and calibration functions (the size of a group as a function of its index value) based on counts from matched digital aerial photographs. The new method described here improved our ability to detect walrus groups at both 2 m and 4 m spatial resolution. In addition, the resulting calibration models have lower variance than the original method. We anticipate that the use of this new procedure will greatly improve the quality of the population estimate derived from these data. This procedure may also have broader applicability to thermal infrared surveys of other wildlife species. Published by Elsevier B.V.

International Journal of Applied Earth Observation

Genomic association with pathogen carriage in bighorn sheep (Ovis canadensis)

Genetic composition can influence host susceptibility to, and transmission of, pathogens, with potential population‐level consequences. In bighorn sheep ( Ovis canadensis ), pneumonia epidemics caused by Mycoplasma ovipneumoniae have been associated with severe population declines and limited recovery across North America. Adult survivors either clear the infection or act as carriers that continually shed M. ovipneumoniae and expose their susceptible offspring, resulting in high rates of lamb mortality for years following the outbreak event. Here, we investigated the influence of genomic composition on persistent carriage of M. ovipneumoniae in a well‐studied bighorn sheep herd in the Wallowa Mountains of Oregon, USA. Using 10,605 SNPs generated using RADseq technology for 25 female bighorn sheep, we assessed genomic diversity metrics and employed family‐based genome‐wide association methodologies to understand variant association and genetic architecture underlying chronic carriage. We observed no differences among genome‐wide diversity metrics (heterozygosity and allelic richness) between groups. However, we identified two variant loci of interest and seven associated candidate genes, which may influence carriage status. Further, we found that the SNP panel explained ~55% of the phenotypic variance (SNP‐based heritability) for M. ovipneumoniae carriage, though there was considerable uncertainty in these estimates. While small sample sizes limit conclusions drawn here, our study represents one of the first to assess the genomic factors influencing chronic carriage of a pathogen in a wild population and lays a foundation for understanding genomic influence on pathogen persistence in bighorn sheep and other wildlife populations. Future research should incorporate additional individuals as well as distinct herds to further explore the genomic basis of chronic carriage.

Oregon

Canada Warbler use of harvested stands following timber management in the southern portion of their range

We evaluated Canada Warbler ( Cardellina canadensis ) responses to changes in habitat characteristics (landscape metrics, landcover, and microhabitat features) at multiple spatial scales resulting from timber harvests (clear-cut, heavy partial, and light partial) between 1996 and 2009. Relative abundance of Canada Warblers decreased over time on our West Virginia study area (Wildlife and Ecosystem Research Forest) and within the Appalachian Bird Conservation Region. Initially, relative abundance was greater closer to roads, but as timber harvests became more common, relative abundance became positively associated with amount of light partial harvests at the local scale. Nest survival was 45.6 ± 18.3% during 1996–1998 and 24.9 ± 14.6% during 2007–2009, but did not differ ( P = 0.38) between these periods. Areas around nests in 2007–2009 ( n = 17) had less intermediate canopy cover and fewer residual trees but more green cover, woody debris, and pole trees than areas around nests in 1996–1998 ( n = 10). Successful nests had more low cover, less vertical diversity, more woody debris, more saplings, and greater edge density than failed nests. We found a positive association between relative abundance and all three types of timber harvests and an improvement in habitat through understory development and retention of residual trees. Our research finds preliminary support for use of timber harvests, particularly light partial harvests, as a management tool for Canada Warblers in the southern portion of their range with the need for extended research using treatments and controls to confirm successful management.

Forest Ecology and Management

Lateral shoreline erosion and shore-proximal sediment deposition on a coastal marsh from seasonal, storm and decadal measurements

The persistence of coastal marsh is dependent on its ability to maintain elevation relative to sea level, particularly for marshes experiencing high rates of shoreline erosion due to wave-attack, storms, and sea level rise. Sediments eroded at the marsh edge are either delivered onto the marsh platform or into the estuary, the latter resulting in a net loss of marsh sediments and soil carbon. Knowledge on the timing, pattern, and quantity of sediment deposition versus shoreline erosion along the marsh-estuary interface is critical for evaluating the overall health and vulnerability of coastal marshes to future scenarios of sea level rise and for estimating sediment budgets . Here we examined marsh shoreline erosion and sediment deposition for marsh sites experiencing a range of shoreline erosion rates and different levels of wind-wave exposure within the Grand Bay National Estuarine Research Reserve and Wildlife Refuge in Mississippi. We developed a method for calculating an erosion-deposition sediment budget using marsh elevation profiles, shoreline erosion rate, and sediment deposition measurements. Sediment budgets were calculated at four sites with varying shoreline erosion rates. Much of the sediment eroded at the marsh edge can be accounted for as marsh platform deposition, except at the most erosive site, suggesting a possible erosion threshold where eroded sediment mass is greater than platform deposition. Consistent with other studies of marsh creeks, sediment delivery to the marsh platform appears to be largely driven by wave climate. These data suggest that for erosive bay-estuarine shorelines, sediment delivered into the marsh is largely concentrated near the marsh shoreline, although shoreline erosion does not always result in a net loss of sediments from the marsh system in either decadal or annual assessments.

Mississippi