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ECOGIG: Oil spill effects on deep-sea corals through the lenses of natural hydrocarbon seeps and long time series

The 2015 Ecosystem Impacts of Oil and Gas Inputs to the Gulf (ECOGIG) expedition was a continuation of a three-year partnership between our Gulf of Mexico Research Institute-funded research consortium and the Ocean Exploration Trust to study the effects of oil and dispersant on corals and closely related communities affected by the 2010 Deepwater Horizon oil spill (White et al., 2012, 2014; Hsing et al., 2013; Fisher et al., 2014a,b; Figure 1A– C). As part of our analysis, we explored a new site to the west of the Macondo well in lease block Mississippi Canyon (MC) 462 where we examined 50 new corals for impact from the spill (Figure 1D). A total of over 250 corals were re-imaged in 2015 for this ongoing time-series study. Another goal was to initiate a study to determine how proximity to natural seeps affects corals and infauna in these communities.

Oceanography

A three-dimensional mapping of the ocean based on environmental data

The existence, sources, distribution, circulation, and physicochemical nature of macroscale oceanic water bodies have long been a focus of oceanographic inquiry. Building on that work, this paper describes an objectively derived and globally comprehensive set of 37 distinct volumetric region units, called ecological marine units (EMUs). They are constructed on a regularly spaced ocean point-mesh grid, from sea surface to seafloor, and attributed with data from the 2013 World Ocean Atlas version 2. The point attribute data are the means of the decadal averages from a 57-year climatology of six physical and chemical environment parameters (temperature, salinity, dissolved oxygen, nitrate, phosphate, and silicate). The database includes over 52 million points that depict the global ocean in x, y, and z dimensions. The point data were statistically clustered to define the 37 EMUs, which represent physically and chemically distinct water volumes based on spatial variation in the six marine environmental characteristics used. The aspatial clustering to produce the 37 EMUs did not include point location or depth as a determinant, yet strong geographic and vertical separation was observed. Twenty-two of the 37 EMUs are globally or regionally extensive, and account for 99% of the ocean volume, while the remaining 15 are smaller and shallower, and occur around coastal features. We assessed the vertical distribution of EMUs in the water column and placed them into classical depth zones representing epipelagic (0 m to 200 m), mesopelagic (200 m to 1,000 m), bathypelagic (1,000 m to 4,000 m) and abyssopelagic (>4,000 m) layers. The mapping and characterization of the EMUs represent a new spatial framework for organizing and understanding the physical, chemical, and ultimately biological properties and processes of oceanic water bodies. The EMUs are an initial objective partitioning of the ocean using long-term historical average data, and could be extended in the future by adding new classification variables and by introducing functionality to develop time-specific EMU distribution maps. The EMUs are an open-access resource, and as both a standardized geographic framework and a baseline physicochemical characterization of the oceanic environment, they are intended to be useful for disturbance assessments, ecosystem accounting exercises, conservation priority setting, and marine protected area network design, along with other research and management applications.

Oceanography

How do upwelling and El Niño impact coral reef growth? A guided, inquiry-based lesson

This lesson uses real-world data to guide students toward understanding how climate and ocean variables impact coral reef growth. To begin this activity, students hypothesize how changes in environmental conditions could affect coral reef growth. They then compare metrics for reef growth (linear growth and percent coral cover) between two reefs in Pacific Panamá that are located in oceanographically and environmentally different embayments, or gulfs. A discussion following the first two activities allows the students to explore possible reasons for the observed differences between the reefs. Students then use their data to calculate a carbonate budget to estimate the rate of reef growth in each gulf. The purpose of calculating a carbonate budget is to provide students with an opportunity to estimate how variables such as coral growth rates, percent coral cover, and bioerosion contribute to the long-term potential for accretion or deterioration of coral reefs.

Oceanography

A global ecological classification of coastal segment units to complement marine biodiversity observation network assessments

A new data layer provides Coastal and Marine Ecological Classification Standard (CMECS) labels for global coastal segments at 1 km or shorter resolution. These characteristics are summarized for six US Marine Biodiversity Observation Network (MBON) sites and one MBON Pole to Pole of the Americas site in Argentina. The global coastlines CMECS classifications were produced from a partitioning of a 30 m Landsat-derived shoreline vector that was segmented into 4 million 1 km or shorter segments. Each segment was attributed with values from 10 variables that represent the ecological settings in which the coastline occurs, including properties of the adjacent water, adjacent land, and coastline itself. The 4 million segments were classified into 81,000 coastal segment units (CSUs) as unique combinations of variable classes. We summarize the process to develop the CSUs and derive summary descriptions for the seven MBON case study sites. We discuss the intended application of the new CSU data for research and management in coastal areas.

Oceanography

Data management and interactive visualizations for the evolving marine biodiversity observation network

Assessing the current state of and predicting change in the ocean’s biological and ecosystem resources requires observations and research to safeguard these valuable public assets. The Marine Biodiversity Observation Network (MBON) partnered with the Global Ocean Observing System Biology and Ecosystems Panel and the Ocean Biodiversity Information System to address these needs through collaboration, data standardization, and data sharing. Here, we describe the generalized MBON data processing flow, which includes several steps to ensure that data are findable, accessible, interoperable, and reusable. By following this flow, data collected and managed by MBON have contributed to our understanding of the Global Ocean Observing System Essential Ocean Variables and demonstrated the value of web-based, interactive tools to explore and better understand environmental change. Although the MBON’s generalized data processing flow is already in practice, work remains in building ontologies for biological concepts, improving processing scripts for data standardization, and speeding up the data collection-to-sharing timeframe.

Oceanography

Long-term ocean observing for international capacity development around tsunami early warning

The 2004 magnitude (M) 9.1 Sumatra-Andaman Islands earthquake in the Indian Ocean triggered the deadliest tsunami ever, killing more than 230,000 people. In response, the United Nations Educational, Scientific, and Cultural Organization (UNESCO) established three additional Intergovernmental Coordination Groups (ICGs) for the Tsunami and Other Coastal Hazards Early Warning System: for the Caribbean and Adjacent Regions (ICG/CARIBE-EWS), for the Indian Ocean, and for the Northeastern Atlantic, Mediterranean, and Connected Seas. Along with the ICG for the Pacific Ocean, which was established in 1965, one of the goals of the new ICGs was to improve earthquake and tsunami monitoring and early warning. This need was further demonstrated by the 2011 Great East Japan (Tōhoku-oki) earthquake and tsunami, which killed more than 20,000 people, and other destructive tsunamis that occurred in the Solomon Islands, Samoa, Tonga, Chile, Indonesia, and Peru. In response to the call to action by the UN Decade of Ocean Science for Sustainable Development (2021–2030), as well as the desired safe ocean outcome (von Hillebrandt-Andrade et al., 2021), the Intergovernmental Oceanographic Commission (IOC) of UNESCO approved the Ocean Decade Tsunami Programme in June 2021. One of its goals is to develop the capability to issue actionable alerts for tsunamis from all sources with minimum uncertainty within 10 minutes (Angove et al., 2019). While laudable, this goal presents complexities. Currently, warning depends on quick detection as well as the location and initial magnitude estimates of an earthquake that may generate a tsunami. Other factors that affect tsunamis, such as the faulting mechanism (how the faults slide past each other) and areal extent of the earthquake, currently take at least 20–30 minutes to forecast and are still subject to large uncertainties. Hence, agencies charged with tsunami early warning need to broadcast public alerts within minutes after an earthquake occurs but may struggle to meet this 10-minute goal without further technological advances, some of which are outlined in this article. To reduce loss of life through adequate tsunami warning requires global ocean-based seismic, sea level, and geodetic initiatives to detect high-impact earthquakes and tsunamis, combined with sufficient communication and education so that people know how to respond when they receive alerts and warnings. The United Nations International Strategy for Disaster Reduction defines an early warning system as “a set of capacities needed to generate and disseminate timely and meaningful warning information to enable individuals, communities, and organizations threatened by a hazard to prepare and to act appropriately and in sufficient time to reduce the possibility of harm or loss” (UNISDR, 2012). In short, a successful early warning system requires technology coupled with human factors (Kelman and Glantz, 2014). In this article, we explore case studies from Japan and Canada, where scientists are leading the way in incorporating ocean observing capabilities in their early warning systems. We also explore advancements and challenges in the Caribbean, an area with a complex tectonic environment that would benefit greatly from increased global ocean observing capabilities. We also explore physical and social science interventions necessary to reduce loss of life.

Oceanography

Harmful algal blooms in the Alaskan Arctic: An emerging threat as oceans warm

Harmful algal blooms (HABs) present an emerging threat to human and ecosystem health in the Alaskan Arctic. Two HAB toxins are of concern in the region: saxitoxins (STXs), a family of compounds produced by the dinoflagellate Alexandrium catenella , and domoic acid (DA), produced by multiple species in the diatom genus Pseudo-nitzschia . These potent neurotoxins cause paralytic and amnesic shellfish poisoning, respectively, in humans, and can accumulate in marine organisms through food web transfer, causing illness and mortality among a suite of wildlife species. With pronounced warming in the Arctic, along with enhanced transport of cells from southern waters, there is significant potential for more frequent and larger HABs of both types. STXs and DA have been detected in the tissues of a range of marine organisms in the region, many of which are important food resources for local residents. The unique nature of the Alaskan Arctic, including difficult logistical access, lack of response infrastructure, and reliance of coastal populations on the noncommercial acquisition of marine resources for nutritional, cultural, and economic well-being, poses urgent and significant challenges as this region warms and the potential for impacts from HABs expands.

Oceanography

Ecological Benthic Units (EBUs): A new characterization of the global seafloor for ocean spatial planning and management

Effective management of deep-sea ecosystems and the high seas is hindered by the absence of a globally consistent framework for characterizing benthic habitats. Here we present the first global ecological classification of the seafloor, comprising 250 unique ecological benthic units (EBUs), distributed on the seafloor as nearly 700,000 EBU polygon occurrences, generated by intersecting a high-resolution geomorphic map with multivariate environmental seascapes. Using 17 million seafloor data points and 0.05° resolution biophysical datasets—including bottom temperature, dissolved oxygen, pH, carbon flux, sediment thickness, crustal age, and bottom currents—we identified 57 benthic regions across six major geomorphic groups (shelves, slopes, seamounts/guyots, spreading ridges, abyssal/hadal areas, plateaus). The resulting EBUs reveal previously unrecognized ecological gradients, quantify global patterns of benthic heterogeneity, and expose large-scale environmental vulnerabilities. Notably, we find that 95.6 million km 2 (26% of the ocean area) of abyssal seafloor lies below the carbonate compensation depth, that 4.16 million km 2 (1% of the ocean) of continental slopes intersect severe oxygen minima, and <1% of seamounts occur in seascapes most environmentally favorable to life. These insights provide a powerful basis for identifying rare habitat configurations, assessing exposure to climate-driven stressors, and prioritizing areas for high seas marine protected area planning, as well as a policy-relevant foundation for environmental impact assessment and biodiversity baseline proxies under the new United Nations High Seas Treaty.

Oceanography

Changes in atmospheric circulation patterns affect midcontinent wetlands sensitive to climate

Twenty-seven years of data from midcontinent wetlands indicate that the response of these wetlands to extremes in precipitation-drought and deluge-persists beyond the extreme events. Chemical changes transcend such simple relations as increased salinity during dry periods because drought provides mechanisms for removal of salt by deflation and seepage to groundwater. Inundation of vegetation zones including rooted or floating mats of cattail (Typha glauca) can stimulate sulfate reduction and shift the anion balance from sulfate to bicarbonate dominance. Disruptions in the circulation of moisture-laden air masses over the midcontinent, as in the drought of 1988 and the deluge of 1993, have a major effect on these wetlands, which are representatives of the primary waterfowl breeding habitat of the continent.

Limnology and Oceanography

*d13C composition of primary producers and role of detritus in a freshwater coastal ecosystem

Stable-isotope ratio signatures of primary producers in a coastal wetland and in adjacent offshore waters of western Lake Superior indicated that phytoplankton are the primary source of carbon for the grazing food web of this ecosystem. This study outlines the possible roles of other autotrophs in this regard. Isotopic signatures of macrophytes reflected their life-form-associated constraints on diffusion of inorganic carbon. Data indicated that differences between wetland and lake phytoplankton may be explained by the isotopic signatures of their dissolved inorganic carbon (DIC) sources. Results of an in situ experiment showed that respiration associated with macrophyte decomposition is capable of enriching surrounding water with significant amounts of *d13C-depleted DIC and lowering the net *d13C ratio of DIC in water in low-turbulence situations. The *d13C ratio for wetland phytoplankton may be depleted relative to pelagic algae because the fixed carbon is derived from decomposing detritus.

Limnology and Oceanography

Multiple stresses from a single agent: Diverse responses to the experimental acidification of Little Rock Lake, Wisconsin

A single stress, acidification with sulfuric acid, was applied to Little Rack Lake in a whole-ecosystem manipulation. We documented a wide range of responses to the acidification, including increases in the concentrations of various chemicals, shifts in microbial processes and a major increase in water clarity to UV-B radiation. Each of these changes could in itself be considered as a separate ecosystem stress that is distinct from the intended manipulation. Acidification in Little Rock Lake was accompanied by a number of substantial changes in the occurrence of organisms. A series of detailed investigations indicates that the mechanisms underlying these organismal changes are varied but cannot usually be tied to the direct effects of acidification. Overall, our results demonstrate how multiple stresses can arise from a single agent operating on an ecosystem and suggest that singly operating stresses may actually be quite rare.

Limnology and Oceanography

Modeling lakes and reservoirs in the climate system

Modeling studies examining the effect of lakes on regional and global climate, as well as studies on the influence of climate variability and change on aquatic ecosystems, are surveyed. Fully coupled atmosphere-land surface-lake climate models that could be used for both of these types of study simultaneously do not presently exist, though there are many applications that would benefit from such models. It is argued here that current understanding of physical and biogeochemical processes in freshwater systems is sufficient to begin to construct such models, and a path forward is proposed. The largest impediment to fully representing lakes in the climate system lies in the handling of lakes that are too small to be explicitly resolved by the climate model, and that make up the majority of the lake-covered area at the resolutions currently used by global and regional climate models. Ongoing development within the hydrological sciences community and continual improvements in model resolution should help ameliorate this issue.

Limnology and Oceanography

Enumeration of viruses and prokaryotes in deep-sea sediments and cold seeps of the Gulf of Mexico

Little is known about the distribution and abundance of viruses in deep-sea cold-seep environments. Like hydrothermal vents, seeps support communities of macrofauna that are sustained by chemosynthetic bacteria. Sediments close to these communities are hypothesized to be more microbiologically active and therefore to host higher numbers of viruses than non-seep areas. Push cores were taken at five types of Gulf of Mexico habitats at water depths below 1000 m using a remotely operated vehicle (ROV). The habitats included non-seep reference sediment, brine seeps, a microbial mat, an urchin field, and a pogonophoran worm community. Samples were processed immediately for enumeration of viruses and prokaryotes without the addition of a preservative. Prokaryote counts were an order of magnitude lower in sediments directly in contact with macrofauna (urchins, pogonophorans) compared to all other samples (10 7 vs. 10 8 cells g -1 dry weight) and were highest in areas of elevated salinity (brine seeps). Viral-Like Particle (VLP) counts were lowest in the reference sediments and pogonophoran cores (10 8 VLP g -1 dry wt), higher in brine seeps (10 9 VLP g -1 dry wt), and highest in the microbial mats (10 10 VLP g -1 dry wt). Virus-prokaryote ratios (VPR) ranged from <5 in the reference sediment to >30 in the microbial mats and >60 in the urchin field. VLP counts and VPR were all significantly greater than those reported from sediments in the deep Mediterranean Sea and in most cases were higher than recent data from a cold-seep site near Japan. The high VPR suggest that greater microbial activity in or near cold-seep environments results in greater viral production and therefore higher numbers of viruses.

Gulf Of Mexico;Green Canyon;Atwater Valley;Alamino

Hydrogeomorphic features mediate the effects of land use/cover on reservoir productivity and food webs

Although effects of land use/cover on nutrient concentrations in aquatic systems are well known, half or more of the variation in nutrient concentration remains unexplained by land use/cover alone. Hydrogeomorphic (HGM) landscape features can explain much remaining variation and influence food web interactions. To explore complex linkages among land use/cover, HGM features, reservoir productivity, and food webs, we sampled 11 Ohio reservoirs, ranging broadly in agricultural catchment land use/cover, for 3 years. We hypothesized that HGM features mediate the bottom-up effects of land use/cover on reservoir productivity, chlorophyll a , zooplankton, and recruitment of gizzard shad, an omnivorous fish species common throughout southeastern U.S. reservoirs and capable of exerting strong effects on food web and nutrient dynamics. We tested specific hypotheses using a model selection approach. Percent variation explained was highest for total nitrogen ( R 2 = 0.92), moderately high for total phosphorus, chlorophyll a , and rotifer biomass ( R 2 = 0.57 to 0.67), relatively low for crustacean zooplankton biomass and larval gizzard shad hatch abundance ( R 2 = 0.43 and 0.42), and high for larval gizzard shad survivor abundance ( R 2 = 0.79). The trophic status models included agricultural land use/cover and an HGM predictor, whereas the zooplankton models had few HGM predictors. The larval gizzard shad models had the highest complexity, including more than one HGM feature and food web components. We demonstrate the importance of integrating land use/cover, HGM features, and food web interactions to investigate critical interactions and feedbacks among physical, chemical, and biological components of linked land-water ecosystems.

Limnology and Oceanography

Autotrophic processes in meromictic Big Soda Lake, Nevada.

Daily rates of oxygenic photosynthesis (OP) by phytoplankton, anoxygenic photosynthesis (AP) by purple sulfur bacteria, and chemoautotrophic productivity (CP = dark CO2 assimilation) were measured once each season. Total daily productivity and the relative importance of each autotrophic process varied with seasonal changes in vertical mixing, light availability, and the biomass of phototrophs. Daily productivity was highest (2830 mg C.m-2) and was dominated by OP in winter when the mixolimnion was isothermal, the biomass of phytoplankton was high, and the biomass of purple sulfur bacteria was low. During the summer-fall period of thermal stratification, phytoplankton biomass decreased, a plate of purple sulfur bacteria formed below the oxycline, and daily rates of dark CO2 assimilation (CP = 390-680 mg C.m-2) exceeded phototrophic productivity (OP + AP = 200-370 mg C.m-2). Total annual productivity was approx 500 g C.m-2, of which 60% was produced by phytoplankton (mostly in winter), 30% by chemoautotrophs (nitrifying and sulfur-oxidizing bacteria), and only 10% by photosynthetic bacteria. -Authors

Limnology and Oceanography

Methane cycling in the sediments of Lake Washington

About half of the methane flux from depth is oxidized to CO2 in the upper 0.7 cm of the sediments and the remainder escapes into the water column. In terms of the total carbon budget of the lake, the upward flux of methane is insignificant with only about 2% of the carbon fixed by primary production being returned as methane. The upward flux of methane, however, does represent about 20% of the organic carbon decomposed within the sediments. -from Authors

Limnology and Oceanography