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USGS2019

Aquatic–terrestrial linkages provide novel opportunities for freshwater ecologists to engage stakeholders and inform riparian management

Studies of aquatic–terrestrial ecosystem linkages explore the mechanisms by which components of one ecosystem, such as the aquatic insect community in a stream, directly affect components of an adjacent ecosystem, such as the density and diversity of riparian predators. On a human level, research into these linkages allows freshwater ecologists to form novel collaborations with stakeholders and other interest groups by emphasizing shared interests. To highlight this point, we use 3 case studies as examples of how aquatic–terrestrial linkages research can be leveraged to achieve multifaceted goals of improving riparian and freshwater management, engaging stakeholders, and advancing ecological understanding. In the 1 st case study, we describe a project in which consideration of the complex life histories of aquatic insects could have led to more effective outcomes for riparian bird restoration. The 2 nd case study provides an example of how studying contaminant transport through ecological subsidies has been incorporated into programs for contaminant management. In the 3 rd case, we use a study of terrestrial vertebrates feeding on adult aquatic insects to show how research into aquatic–terrestrial subsidies connects freshwater ecologists, youth groups, and commercial river guides. By focusing on how in-stream processes propagate onto land through ecological subsidies, we argue that freshwater ecologists also gain a platform for communicating their science to riparian managers and the public, which can improve the potential for stream and riparian co-management and restoration success.

Freshwater Science↗

USGS2018

Capture efficiency and injury rates of band-tailed pigeons using whoosh nets

Catching ground feeding birds has typically been accomplished through small, walk-in funnel-style traps. This approach is limited because it requires a bird to find its way into the trap, is biased toward less wary birds, and does not allow targeted trapping of individual birds. As part of a large study on Band-tailed Pigeons ( Patagioenas fasciata ) in New Mexico, we needed a trapping method that would allow more control over the number of birds we could trap at one time, when a trap was deployed, and target trapping of specific individuals. We adopted a relatively novel trapping technique used primarily for shorebirds, whoosh nets, to trap Band-tailed Pigeons at 3 different sites where birds were being fed by local landowners. During 2013–2015, whoosh nets were used to trap 702 Band-tailed Pigeons at 3 different locations in New Mexico. We captured 12.54 ± 8.19 pigeons per shot over 56 capture events across 3 locations (range: 2–39). Some superficial injuries occurred using this technique and typically involved damage to the primary and secondary wing coverts. In 2013, 24% of captured birds had an injury of this nature, but after modifying the net speed, injury rates in 2014 and 2015 dropped to 8% and 7%, respectively. Recaptured previously injured birds showed new feather growth within 2 weeks and showed no signs of injury after 4 weeks. Whoosh nets proved to be a highly effective solution for trapping large numbers of pigeons at baited sites. These systems are easily transported, quickly deployed, and easily adapted to a variety of site conditions.

New Mexico↗

USGS1989

Nest success, cause-specific nest failure, and hatchability of aquatic birds at selenium-contaminated Kesterson Reservoir and a reference site

During 1983-1985, we studied the reproductive success of several species of aquatic birds (coots, ducks, shorebirds, and grebes) nesting at two sites in Merced County, California: a selenium-contaminated site (Kesterson Reservoir) and a nearby reference site (Volta Wildlife Area). We used a computer program (MICROMORT) developed for the analysis of radiotelemetry data (Heisey and Fuller 1985) to estimate nest success and cause-specific failure rates, and then compared these parameters and hatchability between sites and among years. Nest success and causes of failure varied by species, site, and year. The most important causes of nest failure were usually predation, desertion, and water-level changes. However, embryotoxicosis (mortality, deformity, and lack of embryonic development) was the most important cause of nest failure in Eared Grebes ( Podiceps nigricollis ) at Kesterson Reservoir. Embryotoxicosis also reduced the hatchability of eggs of all other species at Kesterson in one or more years; embryonic mortality occurred rarely at Volta, and abnormalities were not observed.

California↗

USGS1958

Birds and Aircraft on Midway Islands, 1956-57 Investigations

The purpose of this study is to determine the extent to which certain species of birds contribute to the hazard to aircraft at Midway; to learn more about the population dynamics and habits of these species to determine what type of control measures might be possible without endangering the species; and to test methods of control which are suggested. Most of the study has been devoted to the two species of albatrosses and the sooty terns nesting at Midway because of the current belief that these species offered the greatest danger to aircraft safety.

Special Scientific Report - Wildlife↗

USGS2002

Wading birds as bioindicators of mercury contamination in Florida, USA: Annual and geographic variation

Mercury contamination in wetland biota is often dynamic, difficult to predict, and costly to track. In this paper, we present results from a six-year study of growing feathers of piscivorous birds as monitors of wetland Hg exposure in Florida, USA, wetlands. Between 1994 and 2000, we collected feathers of growing great egret ( Ardea alba ) nestlings from colonies in the freshwater Everglades of southern Florida, and during 1998, feathers were collected from chicks of both great egrets and white ibises ( Eudocimus albus ) at a variety of colonies throughout peninsular Florida. Coastal colonies showed significantly lower feather Hg concentrations than did inland sites. Within the Everglades, we found significant effects of both geographic location and year on age-adjusted mean total Hg concentrations in feathers. Over the course of our study, Everglades colonies maintained their Hg concentration rankings relative to one another, but all showed strongly declining Hg concentrations (mean of 73% averaged across colonies, between 1994 and 2000). Using a previously established predictive relationship between Hg consumption in food and feather Hg for great egrets, we estimated that Hg concentrations in the aggregate diet of egrets have been reduced by an average of 67%. We conclude that the Everglades has undergone a biologically significant decline in Hg availability in the wetland food web, possibly because of decreased local inputs.

Florida↗

USGS2005

Variability in colony attendance of crevice-nesting horned puffins: Implications for population monitoring

It is difficult to survey crevice-nesting seabirds because nest-sites are hard to identify and count, and the number of adult birds attending a colony can be extremely variable within and between days. There is no standardized method for surveying crevice-nesting horned puffins ( Fratercula corniculata ), and consequently little is known about abundance or changes in their numbers. We examined the variability in colony attendance of horned puffins at 5 breeding colonies in the North Pacific to assess whether variation in count data can be reduced to a level that would allow us to detect changes in the number of birds attending a colony. We used within-year measures of variation in attendance to examine the power to detect a change in numbers between 2 years, and we used measures of among-year variation to examine the power to detect trends over multiple years. Diurnal patterns of attendance differed among colonies, and among-day variation in attendance was generally lowest from mid- to late-incubation to early chick rearing. Within-year variation in water counts was lower than in land counts, and variation was lower using a daily index based on 5 counts per day than it was using 1 count per day. Measures of among-year variation in attendance also were higher for land-based than water-based counts, and they were higher when we used a 10-day survey period than when we used a 30-day period. The use of either 1 or 5 counts a day during the colony-specific diurnal peak of attendance had little influence on levels of among-year variation. Overall, our study suggests that variation in count data may be reduced to a level that allows detection of trends in numbers. However, more studies of interannual variability in horned puffin attendance are needed. Further, the relationship between count data and breeding population size needs more study before the number of birds present at the colony can be used with confidence as an index of population trend.

Buldir Island, Chowiet Island, Duck Island, Suklik↗

USGS2016

Effects of Climate and land use on diversity, prevalence, and seasonal transmission of avian hematozoa in American Samoa

The indigenous forest birds of American Samoa are increasingly threatened by changing patterns of rainfall and temperature that are associated with climate change as well as environmental stressors associated with agricultural and urban development, invasive species, and new introductions of avian diseases and disease vectors. Long term changes in their distribution, diversity, and population sizes could have significant impacts on the ecological integrity of the islands because of their critical role as pollinators and seed dispersers. We documented diversity of vector borne parasites on Tutuila and Ta‘u Islands over a 10-year period to expand earlier observations of Plasmodium, Trypanosoma , and filarial parasites, to provide better parasite identifications, and to create a better baseline for detecting new parasite introductions. We also identified potential mosquito vectors of avian Plasmodium and Trypanosoma , determined whether land clearing and habitat alterations associated with subsistence farming within the National Park of American Samoa can influence parasite prevalence, and determined whether parasite prevalence is correlated with seasonal changes in rainfall, temperature and wind speed. Three taxonomically distinct lineages of Plasmodium were identified from mosquito vectors and forest birds based on partial sequence data from parasite mitochondrial genes. All three have been described from passerine and galliform birds in Australasia. Two lineages, SCEDEN01 and ORW1, had elongate gametocytes and large schizonts that were consistent with species of Plasmodium in the subgenus Giavannolaia, but were taxonomically distinct from known morphological species of Plasmodium based on a Bayesian phylogenetic analysis of a 478 bp region of the parasite cytochrome b gene. Both are candidates for description as new species. The third lineage (GALLUS02) was detected only in mosquito vectors on Tutuila and was similar in cytochrome b sequence to P. juxtanucleare , a pathogenic species of Plasmodium from chickens and other galliform birds from Australasia, Africa, and South America. Plasmodium relictum , the malarial parasite that has had such a devastating impact on Hawaiian forest birds, was not detected. We observed large, striated trypanosomes in avian hosts from both Tutuila and Ta‘u Islands that fell within the same taxonomic clade as T. corvi and T. culicavium based on 18S ribosomal DNA sequence. We also observed sheathed microfilariae with pointed tails that had some morphological similarities to microfilaria from species of Pelecitus, Struthiofilaria and Eulimdana , but identification will require recovery and examination of adult filarial worms from the connective tissue or body cavities of infected birds. We also observed one or more species of haemococcidians (Isospora, synonym = Atoxoplasma ) within circulating lymphocytes from multiple avian host species. Overall prevalence of Plasmodium was higher on Ta‘u (22%, 75/341) than Tutuila (9.2%, 27/294), with most infections occurring in Polynesian starlings, Samoan starlings, Wattled honeyeaters, and Cardinal honeyeaters. Prevalence was relatively constant from year to year and between seasons at individual study sites, but varied among study sites, with highest rates of infection in areas with agricultural activity at Faleasao (37.4%, 73/195, Ta‘u Island) and Amalau Valley (9.7%, 21/216, Tutuila Island). Prevalence in more remote areas of the National Park of American Samoa was lower, ranging from 1.4% (2/146) at Laufuti and Luatele on Ta‘u to 7.7% (6/78) at Olo Ridge on Tutuila. Similar trends were evident for infections with Trypanosoma and filarial worms. Overall prevalence was not influenced significantly by warmer, wet (summer) or cooler, dry (winter) season. We detected Plasmodium infections in Culex sitiens and C. quinquefasciatus through either salivary gland and midgut dissections or PCR amplification of parasite cytochrome b genes in pooled or individual samples of mosquitoes that were collected on Tutuila. Pooled or individual Aedes oceanicus, A. polynesiensis, A. tutuilae, A. upolensis, A. nocturnus, Aedes (Finlaya) (mixed pools of A. samoanus, A. oceanicus, A. tutuilae), Aedes (Stegomyia) (mixed pools of A. aegypti, A. upolensis, A. polynesiensis ), and C. annulirostris were negative for Plasmodium , but we detected infections with Trypanosoma through midgut and salivary gland dissections in a single C. sitiens from Amalau Valley, Tutuila and three A. oceanicus from Faleasao, Ta‘u. Two of the A. oceanicus from Faleasao amplified successfully with Trypanosoma primers, but sequences were distinctly different from those obtained from avian hosts. We found a strong association between land use and prevalence of mosquito-transmitted parasites on Ta‘u Island with odds of being infected more than 20 times greater in agricultural plots than more remote native forest. This relationship was evident on Tutuila Island but not statistically significant because of the close proximity of study sites and observed movement of birds between native forest and agricultural land. Our data support previous studies that have suggested that Plasmodium and other vector-borne parasites are part of the indigenous parasite fauna in American Samoa. Transmission dynamics appear to be affected by environmental changes associated with land use practices.

HI↗

USGS1984

Avian models for toxicity testing

The use of birds as test models in experimental and environmental toxicology as related to health effects is reviewed, and an overview of descriptive tests routinely used in wildlife toxicology is provided. Toxicologic research on birds may be applicable to human health both directly by their use as models for mechanistic and descriptive studies and indirectly as monitors of environmental quality. Topics include the use of birds as models for study of teratogenesis and embryotoxicity, neurotoxicity, behavior, trends of environmental pollution, and for use in predictive wildlife toxicology. Uses of domestic and wild-captured birds are discussed.

Journal of the American College of Toxicology↗

USGS2021

Assessment of water availability in the Osage Nation using an integrated hydrologic-flow model

The Osage Nation of northeastern Oklahoma, conterminous with Osage County, covers about 2,900 square miles. The area is primarily rural with 62 percent of the land being native prairie grass, and much of the area is used for cattle ranching and extraction of petroleum and natural gas. Protection of water rights are important to the Osage Nation because of its reliance on cattle ranching and the potential for impairment of water quality by petroleum extraction. Additionally, the potential for future population increases, demands for water from neighboring areas such as the Tulsa metropolitan area, and expansion of petroleum and natural-gas extraction on water resources of this area further the need for the Osage Nation to better understand its water availability. Therefore, the U.S. Geological Survey, in cooperation with the Osage Nation, completed a hydrologic investigation to assess the status and availability of surface-water and groundwater resources in the Osage Nation. A transient integrated hydrologic-flow model was constructed using the U.S. Geological Survey fully integrated hydrologic-flow model called the MODFLOW One-Water Hydrologic Model. The integrated hydrologic-flow model, called the Osage Nation Integrated Hydrologic Model (ONIHM), was constructed and uses an orthogonal grid of 276 rows and 289 columns, and each grid cell measures 1,312.34 feet (ft; 400 meters) per side, with eight variably thick vertical layers that represented the alluvial and bedrock aquifers within the study area, including the alluvial aquifer, the Vamoosa-Ada aquifer, and the minor Pennsylvanian bedrock aquifers, and the confining units. Landscape and groundwater-flow processes were simulated for two periods: (1) the 1950–2014 period from January 1950 through September 2014 and (2) the forecast period from October 2014 through December 2099. The 1950–2014 period ONIHM simulated past conditions using measured or estimated inputs, and the forecast-period ONIHM simulated three separate potential forecast conditions under constant dry, average, or wet climate conditions using calibrated input values from the 1950–2014 period ONIHM. The 1950–2014 period ONIHM was calibrated by linking the Parameter Estimation software (PEST) with the MODFLOW One-Water Hydrologic Model. PEST uses statistical parameter estimation techniques to identify the best set of parameter values to minimize the difference between measured or estimated calibration targets and their simulated equivalent values (residuals). Tikhonov regularization and singular-value decomposition-assist features of PEST were used during the calibration process. The 1950–2014 period ONIHM was calibrated to 713 measured groundwater levels at 195 wells; 95,636 estimated monthly mean groundwater levels at 124 wells; 5,307 measured streamflows at 13 streamgages; and 8,679 simulated mean monthly streamflows at 10 streamgages extracted from a surface-water model by adjusting 231 parameters. The estimated groundwater-level observations and streamflows were included as observations to improve the spatial and temporal density of observation targets during calibration. The best set of parameter values obtained during the calibration process of the 1950–2014 model was then used as the input parameter values for the forecast model simulations. A comparison of the calibration targets to their corresponding simulated values indicated that the model adequately reproduced streamflows and groundwater levels for some streamgages and wells and underestimated streamflows and groundwater levels at other locations. Measured and simulated streamflows correlated adequately with a coefficient of determination of 0.938, as did water levels with a coefficient of determination of 0.795. The 1950–2014 period ONIHM underestimated certain groundwater levels and streamflows, but generally measured or estimated calibration targets correlated well with simulated equivalents, which indicated that the model can adequately simulate the response of the hydrologic system to stresses in the 1950–2014 and forecast periods. In the 1950–2014 period ONIHM, the calibrated mean horizontal hydraulic conductivity for layer 1 alluvial aquifer was 30.7 feet per day, and the seven lower layers had a calibrated mean horizontal hydraulic conductivity of less than 3.3 feet per day. The mean calibrated groundwater-level residual was 16.6 ft, and the mean calibrated streamflow residual of the Arkansas River at Ralston, Oklahoma, streamgage (U.S. Geological Survey station 07152500) was within 6 percent (373 cubic feet per second) of mean measured streamflow for the 1950–2014 period ONIHM. The ONIHM simulated landscape fluxes of precipitation; groundwater applied by irrigation wells; evapotranspiration from precipitation, groundwater, and irrigation; runoff from precipitation; and deep percolation from precipitation. The largest loss of water from the landscape was evapotranspiration from precipitation with a calibrated mean annual outflow of 32 inches (in.): mean annual precipitation was about 36 in. Calibrated mean annual runoff and deep percolation (recharge to the water table) rates were 4.7 inches per year (in/yr) and 0.70 in/yr, respectively, for the 1950–2014 period ONIHM. The calibrated 1950–2014 period ONIHM groundwater fluxes included net farm net recharge (calculated as the difference between the inflow of recharge to the water table and the outflow of evapotranspiration from the water table such that negative values indicate that evapotranspiration from the water table was greater than deep percolation [recharge to the water table] and vice versa). Net farm net recharge was the largest flux from the groundwater system with a mean annual net outflow of 153.4 cubic feet per second. Stream leakage was the largest flux to the groundwater system with a mean annual net inflow of 152.5 cubic feet per second, indicating that, on average, the groundwater/surface-water interaction was a “losing” system where stream water leaked into the subsurface and recharged the water table. Simulated monthly trends demonstrated that net stream leakage was the largest inflow to the groundwater-flow system for 10 of the 12 months; for the other 2 months (January and March), farm net recharge (January) and net storage (March) were the largest inflow to the groundwater-flow system. A saline groundwater interface map was created for the study and compared to the water levels from the final stress period of the 1950–2014 model to identify the presence of fresh/marginal groundwater throughout the study area. Fresh/marginal groundwater was characterized as groundwater with less than 1,500 milligrams per liter of total dissolved solids. Fresh/marginal groundwater thickness ranged from 0 to 438.2 ft within the study area. The thickest regions of fresh/marginal groundwater were in the eastern part of the study area near Sand Creek, Bird Creek, and Hominy Creek and in the Arkansas River alluvial aquifer in the region downstream from the Arkansas River at Ralston, Okla. Like the 1950–2014 model, forecast model results for the landscape indicated that transpiration from precipitation was the largest flux out of the landscape for all three forecasts, constituting 77, 73, and 58 percent of precipitation for the dry, average, and wet forecasts, respectively. The dry and average forecast landscape fluxes demonstrated similar trends and magnitudes, whereas the wet forecast landscape fluxes indicated the largest changes compared to the average forecast fluxes. Most notably, runoff increased from a mean of 1.1 and 1.6 in/yr for the dry and average forecasts, respectively, to 10 in/yr for the wet forecast. Similar changes occurred for the other wet forecast landscape fluxes. The calibrated 1950–2014 period ONIHM simulated three forecasts to assess the effects of potential climatic changes on the hydrologic system from October 2014 to December 2099. The three forecasts simulated theoretical dry, average, and wet conditions using precipitation and potential evapotranspiration datasets from selected years in the calibrated 1950–2014 period ONIHM. Annual precipitation amounts were 26.89, 35.47, and 50.73 in. for the dry, average, and wet forecasts, respectively. Groundwater-flow component forecast results indicated that stream leakage is always a net inflow to the groundwater-flow system for dry, average, and wet conditions, meaning the study area stream network is always predominantly a “losing” regime where stream water infiltrates into the underlying aquifer. Storage was only a net outflow from the groundwater-flow system and indicated a replenishment to groundwater storage that resulted in an increase in groundwater levels only during the wet forecast. Further, these gains in groundwater storage for the wet forecast occurred only during February through June. Mean fresh/marginal groundwater saturated thicknesses were 125 and 126 ft for the dry and average forecast conditions, respectively, and wet forecast average thickness was 145 ft and ranged from 0 to 443 ft. The spatial extents of fresh/marginal groundwater at the end of the dry, average, and wet forecast model periods (December 2099) did not change substantially from the end of the 1950–2014 model period (September 2014).

Kansas, Oklahoma↗

USGS2023

Structure of breeding calls in three closely related bird species (Calidris Merrem, 1804; Scolopacidae)

We studied calls of three sandpiper species to document species’ similarities and differences. We hypothesized that functionally different calls would differ in degree of divergence. We studied two nuptial calls (complex “Song” and rhythmically repeated aerial call, RRC) of males, and a general-purpose call (“alarm” trill, AT) given by parents of both sexes in the presence of humans and other potential predators, in great knot, Calidris tenuirostris (Horsfeld, 1821); surfbird, Calidris virgata (Gmelin, 1789); and red knot, Calidris canutus (Linnaeus, 1758). Calls diverged unevenly across species—RRCs and Song diverged the most and ATs the least. Vocalizations of great knot and surfbird were most similar to one another, in agreement with a recently proposed phylogeny. Despite species differences in single acoustic traits, calls were evolutionarily conservative at higher structural levels, such as rhythmic temporal delivery of RRCs and harmonic structure (e.g., the fundamental frequency was suppressed in some call types). Some acoustic qualities that differed across species were similar across call types within species (e.g., tonality in red knot calls). Trait similarity across different calls suggests that a species’ calls cannot evolve independently of one another: common mechanisms of vocal production across different calls may impede differentiation within a species’ repertoire.

Canadian Journal of Zoology↗

USGS2019

Trends in landbird density at two national parks in fragmented, mixed-use landscapes of the Pacific Northwest

National parks play a key role in conserving species by providing landscapes where threats from anthropogenic disturbance are reduced. In a recent study of 3 large wilderness parks in the Pacific Northwest, nearly all landbird species were found to be stable or increasing. Nonetheless, contemporary results from the Breeding Bird Survey and mark-recapture studies fuel concerns that some landbirds in the Pacific Northwest are trending in sync with many North America species in widespread decline. Although landbird populations might be thriving in large parks with extensive old-growth forest, those in smaller parks with less intact wilderness and higher ratios of edge-to-interior habitat might reflect the stressors inherent in more human-dominated landscapes. We conducted landbird point-count surveys from 2005 to 2016 in 2 national historical parks situated in the more human-dominated landscapes of this region, San Juan Island National Historical Park and Lewis and Clark National Historical Park. Established primarily to protect cultural resources, these parks lack old-growth forest and consist of relatively small parcels embedded in fragmented, multi-use landscapes. Here, we apply recent developments in point-count analysis to estimate trends in population density for 50 landbird species commonly detected in these small parks, including lagged effects of precipitation and temperature on the annual density of each species, and effects of survey conditions on species detection. All but 3 species exhibited stable densities in both parks, and more than half of the populations analyzed clearly increased in density over the study period. Notable exceptions were single-park declines in Olive-sided Flycatcher ( Contopus cooperi ), Northern Flicker ( Colaptes anratus ), and Hutton's Vireo ( Vireo huttoni ). Annual variation in population density was often related to climate, with generally positive responses to a recent deficit in annual precipitation-as-snow, and more variable responses to higher mean spring temperature. These results reinforce trends estimated for 3 large national parks in the Pacific Northwest, suggesting recent stability of landbird populations in parks of this region, independent of park size or setting.

Northwestern Naturalist↗

USGS2002

Variation in survivorship of a migratory songbird throughout its annual cycle

1. Demographic data from both breeding and non-breeding periods are needed to manage populations of migratory birds, many of which are declining in abundance and are of conservation concern. Although habitat associations, and to a lesser extent, reproductive biology, are known for many migratory species, few studies have measured survival rates of these birds at different parts of their annual cycle. 2. Cormack–Jolly–Seber models and Akaike’s information criterion model selection were used to investigate seasonal variation in survival of a Nearctic – Neotropical migrant songbird, the black-throated blue warbler, Dendroica caerulescens . Seasonal and annual survival were estimated from resightings of colour-ringed individuals on breeding grounds in New Hampshire, USA from 1986 to 2000 and on winter quarters in Jamaica, West Indies from 1986 to 1999. Warblers were studied each year during the May–August breeding period in New Hampshire and during the October–March overwinter period in Jamaica. 3. In New Hampshire, males had higher annual survival (0·51 ± 0·03) and recapture probabilities (0·93 ± 0·03) than did females (survival: 0·40 ± 0·04; recapture: 0·87 ± 0·06). In Jamaica, annual survival (0·43 ± 0·03) and recapture (0·95 ± 0·04) probabilities did not differ between sexes. Annual survival and recapture probabilities of young birds (i.e. yearlings in New Hampshire and hatch-year birds in Jamaica) did not differ from adults, indicating that from the time hatch-year individuals acquire territories on winter quarters in mid-October, they survive as well as adults within the same habitat. 4. Monthly survival probabilities during the summer (May–August) and winter (October–March) stationary periods were high: 1·0 for males in New Hampshire, and 0·99 ± 0·01 for males in Jamaica and for females in both locations. 5. These annual and seasonal survival estimates were used to calculate warbler survival for the migratory periods. Monthly survival probability during migration ranged from 0·77 to 0·81 ± 0·02. Thus, apparent mortality rates were at least 15 times higher during migration compared to that in the stationary periods, and more than 85% of apparent annual mortality of D. caerulescens occurred during migration. 6. Additional data from multiple species, especially measures of habitat-specific demography and dispersal, will improve our understanding of the relative impacts of the breeding, migratory, and winter periods on population dynamics of migratory birds and thus enhance future conservation efforts.

Journal of Animal Ecology↗

USGS2013

Animal migration and risk of spread of viral infections

The potential contribution of migration towards the spread of disease is as varied as the ecology of the pathogens themselves and their host populations. This chapter outlines multiple examples of viral diseases in animal populations and their mechanisms of viral spread. Many species of insects, mammals, fish, and birds exhibit migratory behavior and have the potential to disperse diseases over long distances. The majority of studies available on viral zoonoses have focused on birds and bats, due to their highly migratory life histories. A number of studies have reported evidence of changes in the timing of animal migrations in response to climate change. The majority indicate an advancement of spring migration, with few or inconclusive results for fall migration. Predicting the combined effects of climate change on migratory patterns of host species and epidemiology of viral pathogens is complex and not fully realistic.

Book chapter↗

USGS2017

Grassland bird productivity in warm season grass fields in southwest Wisconsin

Surrogate grasslands established through federal set-aside programs, such as U.S. Department of Agriculture's Conservation Reserve Program (CRP), provide important habitat for grassland birds. Warm season grass CRP fields as a group have the potential for providing a continuum of habitat structure for breeding birds, depending on how the fields are managed and their floristic composition. We studied the nesting activity of four obligate grassland bird species, Bobolink ( Dolichonyx oryzivorus ), Eastern Meadowlark ( Sturnella magna ), Grasshopper Sparrow ( Ammodramus savannarum ), and Henslow's Sparrow ( A. henslowii ), in relation to vegetative composition and fire management in warm season CRP fields in southwest Wisconsin during 2009–2011. Intraspecific variation in apparent nest density was related to the number of years since the field was burned. Apparent Grasshopper Sparrow nest density was highest in the breeding season immediately following spring burns, apparent Henslow's Sparrow nest density was highest 1 y post burn, and apparent Bobolink and Eastern Meadowlark nest densities were higher in post fire years one to three. Grasshopper Sparrow nest density was highest on sites with more diverse vegetation, specifically prairie forbs, and on sites with shorter less dense vegetation. Bobolink, Eastern Meadowlark, and Henslow's Sparrow apparent nest densities were higher on sites with deeper litter; litter was the vegetative component that was most affected by spring burns. Overall nest success was 0.487 for Bobolink (22 d nesting period), 0.478 for Eastern Meadowlark (25 d nesting period), 0.507 for Grasshopper Sparrow (22 d nesting period), and 0.151 for Henslow's Sparrow (21 d nesting period). The major nest predators were grassland-associated species: thirteen-lined ground squirrel ( Ictidomys tridecemlineatus ), striped skunk ( Mephitis mephitis ), milk snake ( Lampropeltis triangulum ), American badger ( Taxidea taxus ), and western fox snake ( Elaphe vulpina ). Overall depredation rate was not affected by the number of years since the site had been burned. The diversity of vegetation on warm season CRP fields created by management using fire provides a continuum of structure for obligate grassland birds to use for breeding and habitat for a diversity of nest predators.

Wisconsin↗

USGS2021

Songbird use of interior and edge floodplain forest sites along the Upper Mississippi River, USA, during spring migration and breeding seasons

Floodplain forests of large rivers in the midwestern United States are naturally fragmented by sloughs, backwaters, wetlands, and shrub carr. On the highly altered Upper Mississippi River (UMR), resource managers want to protect and manage floodplain forests to benefit forest “interior” bird species. To discover bird relations with interior and edge floodplain forest, we characterized bird assemblages during spring migration and breeding season in 3 forest types: habitat in the interior of forest areas > 100 m from an edge, edges associated with interior areas, and other areas of forest not associated with an interior area (random sites) on the UMR between Hastings and Red Wing, Minnesota. The random sites represent the majority of UMR floodplain forest area because only a small percentage of forest occurs >100 m from edge. Estimated habitat characteristics did not differ among interior, edge, and random sites. Bird relative abundance, species richness, diversity, assemblage composition, and detections of all but one species (in spring) did not differ among interior, edge, and random sites during both seasons. Our results suggest a homogeneous bird assemblage across UMR floodplain forest in the study area during spring migration and the breeding season, and that individual forest bird species do not seem to be more abundant in interior or edge areas as we defined them.

Minnesota, Wisconsin↗

USGS2018

Differential changes in the onset of spring across US National Wildlife Refuges and North American migratory bird flyways

Warming temperatures associated with climate change can have indirect effects on migratory birds that rely on seasonally available food resources and habitats that vary across spatial and temporal scales. We used two heat-based indices of spring onset, the First Leaf Index (FLI) and the First Bloom Index (FBI), as proxies of habitat change for the period 1901 to 2012 at three spatial scales: the US National Wildlife Refuge System; the four major bird migratory flyways in North America; and the seasonal ranges (i.e., breeding and non-breeding grounds) of two migratory bird species, Blue-winged Warbler ( Vermivora cyanoptera ) and Whooping Crane ( Grus americana ). Our results show that relative to the historical range of variability, the onset of spring is now earlier in 76% of all wildlife refuges and extremely early (i.e., exceeding 95% of historical conditions) in 49% of refuges. In all flyways but the Pacific, the rate of spring advance is generally greater at higher latitudes than at lower latitudes. This differential rate of advance in spring onset is most pronounced in the Atlantic flyway, presumably because of a “warming hole” in the southeastern US. Both FLI and FBI have advanced markedly in the breeding ranges–but not the non-breeding ranges–of the two selected bird species, albeit with considerable intra-range variation. Differences among species in terms of migratory patterns and the location and extent of seasonal habitats, as well as shifts in habitat conditions over time, may complicate predictions of the vulnerability of migratory birds to climate change effects. This study provides insight into how differential shifts in the phenology of disparate but linked habitats could inform local- to landscape-scale management strategies for the conservation of migratory bird populations.

PLoS ONE↗

USGS2020

Spatial ecology of closely-related taxa: The case of the little shearwater complex in the North Atlantic Ocean

Seabirds inhabiting vast water masses provide numerous examples where opposing phenomena, such as natal and breeding philopatry vs. vagility have dug cryptic taxonomic boundaries among closely related taxa. The taxonomy of little shearwaters of the North Atlantic Ocean (Little–Audubon’s shearwater complex, Puffinus assimilis – lherminieri ) still remains unclear, and complementary information on non-breeding distributions and at-sea behaviour becomes essential to unravel divergent local adaptations to specific habitats. Using miniaturized light-level geolocators from seven study areas in the North Atlantic, we evaluate the spatial and habitat segregation, estimate the timing of their key life-cycle events and describe the at-sea behaviour of three taxa of these little shearwaters year-round to distinguish ecological patterns and specializations that could ultimately unravel potential lineage divergences. We also assess morphometric data from birds that were breeding at each study area to further discuss potential adaptations to specific habitats. Our results show that, while birds from different taxa segregated in space and habitats, they share ecological plasticity, similar annual phenology and diel foraging behaviour. These ecological inconsistencies, while defining the evolutionary stressors faced by these taxa, do not suggest the existence of three Evolutionary Significant Units. However, they confirm the recent evolutionary divergence among the three little shearwaters of the North Atlantic.

Zoological Journal of the Linnean Society↗

USGS2020

Abundance and productivity of marbled murrelets ( Brachyramphus marmoratus ) off central California during the 2019 breeding season

Marbled murrelets ( Brachyramphus marmoratus ) have been listed as “endangered” by the State of California and “threatened” by the U.S. Fish and Wildlife Service since 1992 in California, Oregon, and Washington. Information regarding marbled murrelet abundance, distribution, population trends, and habitat associations is critical for risk assessment, effective management, evaluation of conservation efficacy, and ultimately, to meet Federal and State recovery efforts for this species. During June–August 2019, the U.S. Geological Survey Western Ecological Research Center continued previously established, long-term (1996–2019), at-sea surveys to estimate abundance and productivity of marbled murrelets in U.S. Fish and Wildlife Service Conservation Zone 6 (San Francisco Bay to Point Sur in central California). Using conventional distance sampling methods, we estimated marbled murrelet abundance using 125 detections of 216 murrelets (mean group size, 1.72) observed on 8 surveys. The abundance estimated for the entire study area using all surveys in 2019 was 404 birds (95-percent confidence interval, 272–601 birds). Estimated abundance from 2019 is comparable to most prior years of study. In 2019, we estimated reproductive productivity (calculated as the hatch-year [HY] to after-hatch-year [AHY] ratio) using three detections of three HY murrelets observed on six surveys. After date-correcting HY and AHY counts to account for birds expected to be absent from the water while inland at nests, the date-corrected juvenile ratio was 0.025±0.020 standard error. We discuss changes in methodologies during 1996–2019 that could be addressed in re-analysis of this long-term dataset. We updated a synthesized database of all Zone 6 marbled murrelet survey data since 1999 with 2019 data to allow scientists and managers to evaluate established survey methods and assess trends in abundance and productivity estimates.

California↗