Geology ReportsSearch

SEARCH · Geology Reports

Results for “Scientific Data - Nature”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 451 records · Page 25Linked to original sources

Monitoring multiple species: Estimating state variables and exploring the efficacy of a monitoring program

Monitoring programs have the potential to identify population declines and differentiate among the possible cause(s) of these declines. Recent criticisms regarding the design of monitoring programs have highlighted a failure to clearly state objectives and to address detectability and spatial sampling issues. Here, we incorporate these criticisms to design an efficient monitoring program whose goals are to determine environmental factors which influence the current distribution and measure change in distributions over time for a suite of amphibians. In designing the study we (1) specified a priori factors that may relate to occupancy, extinction, and colonization probabilities and (2) used the data collected (incorporating detectability) to address our scientific questions and adjust our sampling protocols. Our results highlight the role of wetland hydroperiod and other local covariates in the probability of amphibian occupancy. There was a change in overall occupancy probabilities for most species over the first three years of monitoring. Most colonization and extinction estimates were constant over time (years) and space (among wetlands), with one notable exception: local extinction probabilities for Rana clamitans were lower for wetlands with longer hydroperiods. We used information from the target system to generate scenarios of population change and gauge the ability of the current sampling to meet monitoring goals. Our results highlight the limitations of the current sampling design, emphasizing the need for long-term efforts, with periodic re-evaluation of the program in a framework that can inform management decisions.

Biological Conservation

Paleohydrologic phenomena recorded by lake sediments

Hydrologic phenomena are dynamic, so their understanding and prediction are difficult and challenging. Many are cyclic, ranging from diurnal, seasonal, and annual cycles to climatic fluctuations of many hundreds or thousands of years. Predicting the magnitude and recurrence intervals of long-term fluctuations of these phenomena is a primary concern of hydrologists. The best data upon which to base predictions are those that directly measure a hydrologic phenomenon, such as stream discharge, lake level, and precipitation. Programs for collection of these data over a large area on a scientific basis, however, are less than 100 years old-not a very sound statistical base for predicting events that have recurrence intervals of at least that long.

Earth and Space Science

All equal-area map projections are created equal, but some are more equal than others

High-resolution regional and global raster databases are currently being generated for a variety of environmental and scientific modeling applications. The projection of these data from geographic coordinates to a plane coordinate system is subject to significant areal error. Sources of error include users selecting an inappropriate projection or incorrect parameters for a given projection, algorithmic errors in commercial geographic information system (GIS) software, and errors resulting from the projection of data in the raster format. To assess the latter type of errors, the accuracy of raster projection was analyzed by two methods. First, a set of 12 one-degree by one-degree quadrilaterals placed at various latitudes was projected at several raster resolutions and compared to the projection of a vector representation of the same quadrilaterals. Second, several different raster resolutions of land cover data for Asia were projected and the total areas of 21 land cover categories were tabulated and compared. While equal-area projections are designed to specifically preserve area, the comparison of the results of the one-degree by one-degree quadrilaterals with the common equal area projections (e.g., the Mollweide) indicates a considerable variance in the one-degree area after projection. Similarly, the empirical comparison of land cover areas for Asia among various projections shows that total areas of land cover vary with projection type, raster resolution, and latitude. No single projection is best for all resolutions and all latitudes. While any of the equal-area projections tested are reasonably accurate for most applications with resolutions of eight-kilometer pixels or smaller, significant variances in accuracies appear at larger pixel sizes.

Cartography and Geographic Information Science

The Argos seismic data message system

A reliable, inexpensive method for sending limited daily seismic data messages from remote observatories to the National Earthquake Information Center has been developed for use with the Argos satellite system. Data messages are compressed on a microcomputer and passed automatically to a simple transmitter. About 4 hr later, the data are available at the National Earthquake Information Center, where they are decompressed and reformatted into standard telegrams for use in quick epicenter determinations. Epicenter data are available daily to the international scientific community.

Bulletin of the Seismological Society of America

Guidelines for a graph-theoretic implementation of structural equation modeling

Structural equation modeling (SEM) is increasingly being chosen by researchers as a framework for gaining scientific insights from the quantitative analyses of data. New ideas and methods emerging from the study of causality, influences from the field of graphical modeling, and advances in statistics are expanding the rigor, capability, and even purpose of SEM. Guidelines for implementing the expanded capabilities of SEM are currently lacking. In this paper we describe new developments in SEM that we believe constitute a third-generation of the methodology. Most characteristic of this new approach is the generalization of the structural equation model as a causal graph. In this generalization, analyses are based on graph theoretic principles rather than analyses of matrices. Also, new devices such as metamodels and causal diagrams, as well as an increased emphasis on queries and probabilistic reasoning, are now included. Estimation under a graph theory framework permits the use of Bayesian or likelihood methods. The guidelines presented start from a declaration of the goals of the analysis. We then discuss how theory frames the modeling process, requirements for causal interpretation, model specification choices, selection of estimation method, model evaluation options, and use of queries, both to summarize retrospective results and for prospective analyses. The illustrative example presented involves monitoring data from wetlands on Mount Desert Island, home of Acadia National Park. Our presentation walks through the decision process involved in developing and evaluating models, as well as drawing inferences from the resulting prediction equations. In addition to evaluating hypotheses about the connections between human activities and biotic responses, we illustrate how the structural equation (SE) model can be queried to understand how interventions might take advantage of an environmental threshold to limit Typha invasions. The guidelines presented provide for an updated definition of the SEM process that subsumes the historical matrix approach under a graph-theory implementation. The implementation is also designed to permit complex specifications and to be compatible with various estimation methods. Finally, they are meant to foster the use of probabilistic reasoning in both retrospective and prospective considerations of the quantitative implications of the results.

Ecosphere

Subsampling large-scale digital elevation models to expedite geospatial analyses in coastal regions

Large-area, high-resolution digital elevation models (DEMs) created from light detection and ranging (LIDAR) and/or multibeam echosounder data sets are commonly used in many scientific disciplines. These DEMs can span thousands of square kilometers, typically with a spatial resolution of 1 m or finer, and can be difficult to process and analyze without specialized computers and software. Such DEMs often can be subsampled to expedite analysis with negligible impact on results for large-scale geospatial analyses. Subsampling can be achieved by creating a grid of points that specify the locations from which to extract elevation values from the DEM. This paper presents a method that can be used to accurately perform subsampling of large-scale, high-resolution DEMs using GIS software. This subsampling method was applied to two LIDAR-derived DEMs encompassing 242 km 2 of the northern Florida Reef Tract as an example application and to test subsampling accuracy. Results indicate that subsampling 1-m-resolution DEMs using a 2-m-spaced grid results in no significant difference in mean elevation or other basic statistics for analyses performed over multiple spatial scales ranging from 1 km 2 to 242 km 2 .

Journal of Coastal Research

Database for the east half of "Preliminary Geologic Map of the Blythe 30' by 60' quadrangle, California and Arizona"

This digital map database was prepared from the published Preliminary Geologic Map of the Blythe 30' by 60' Quadrangle, California and Arizona (U.S. Geological Survey Open-File Report 90-497). This database represents the east half of the original published map. The database contains exactly the same scientific content as the original map; no data have been added to, subtracted from, or modified from the original map. Like the original paper map, this database represents the general distribution of bedrock and surficial deposits in the mapped area. It provides information on the geologic structure and stratigraphy of the area covered. The database delineates map units that are identified by general age and lithology following the stratigraphic nomenclature of the U.S. Geological Survey. The scale of the original published map limits the spatial resolution (scale) of the database to 1:100,000 or smaller.

Arizona, California

A conceptual hydrogeologic model for the hydrogeologic framework, geochemistry, and groundwater-flow system of the Edwards-Trinity and related aquifers in the Pecos County region, Texas

The Edwards-Trinity aquifer is a vital groundwater resource for agricultural, industrial, and municipal uses in the Trans-Pecos region of west Texas. A conceptual model of the hydrogeologic framework, geochemistry, and groundwater-flow system in the 4,700 square-mile study area was developed by the U.S. Geological Survey (USGS) in cooperation with the Middle Pecos Groundwater Conservation District, Pecos County, City of Fort Stockton, Brewster County, and Pecos County Water Control and Improvement District No. 1. The model was developed to gain a better understanding of the groundwater system and to establish a scientific foundation for resource-management decisions. Data and information were collected or obtained from various sources to develop the model. Lithologic information obtained from well reports and geophysical data were used to describe the hydrostratigraphy and structural features of the groundwater system, and aquifer-test data were used to estimate aquifer hydraulic properties. Groundwater-quality data were used to evaluate groundwater-flow paths, water and rock interaction, aquifer interaction, and the mixing of water from different sources. Groundwater-level data also were used to evaluate aquifer interaction as well as to develop a potentiometric-surface map, delineate regional groundwater divides, and describe regional groundwater-flow paths. Several previous studies have been done to compile or collect physical and chemical data, describe the hydrogeologic processes, and develop conceptual and numerical groundwater-flow models of the Edwards-Trinity aquifer in the Trans-Pecos region. Documented methods were used to compile and collect groundwater, surface-water, geochemical, geophysical, and geologic information that subsequently were used to develop this conceptual model.

Texas

General introduction for the “National Field Manual for the Collection of Water-Quality Data”

Background As part of its mission, the U.S. Geological Survey (USGS) collects data to assess the quality of our Nation’s water resources. A high degree of reliability and standardization of these data are paramount to fulfilling this mission. Documentation of nationally accepted methods used by USGS personnel serves to maintain consistency and technical quality in data-collection activities. “The National Field Manual for the Collection of Water-Quality Data” (NFM) provides documented guidelines and protocols for USGS field personnel who collect water-quality data. The NFM provides detailed, comprehensive, and citable procedures for monitoring the quality of surface water and groundwater. Topics in the NFM include (1) methods and protocols for sampling water resources, (2) methods for processing samples for analysis of water quality, (3) methods for measuring field parameters, and (4) specialized procedures, such as sampling water for low levels of mercury and organic wastewater chemicals, measuring biological indicators, and sampling bottom sediment for chemistry. Personnel who collect water-quality data for national USGS programs and projects, including projects supported by USGS cooperative programs, are mandated to use protocols provided in the NFM per USGS Office of Water Quality Technical Memorandum 2002.13. Formal training, for example, as provided in the USGS class, “Field Water-Quality Methods for Groundwater and Surface Water,” and field apprenticeships supplement the guidance provided in the NFM and ensure that the data collected are high quality, accurate, and scientifically defensible.

Techniques and Methods

Increasing the usability and accessibility of Voyager 2 images of Triton

Much of what we know about Neptune’s moon Triton was inferred from the analysis of images returned by the Voyager 2 mission, the only spacecraft to have visited that putative ocean world. Unfortunately, the highest-resolution images (scales < 2 km pixel −1 ) are difficult to use because they are only available in nonstandard formats, and the locations of the images on Triton’s surface are incorrect by up to 200 km. Although image mosaics of Triton are publicly available, these do not include the highest-resolution data. Here we describe our effort to improve the usability and accessibility of Voyager 2 images of Triton. We used the USGS’s ISIS software to process 41 Triton images, including geometric calibration, radiometric calibration, and reseau removal. We improved the image locations using a photogrammetric control network with 958 points and 3910 image measurements. Least-squares bundle adjustment of the network yielded rms uncertainty of 0.50, 0.52, and 0.51 pixels in latitude, longitude, and radius, respectively, and maximum residuals of −4.21 and +3.20 pixels, respectively. Image-to-image alignment is therefore vastly improved. We have released these processed images as cloud-optimized GeoTIFFs in orthographic projection at the original pixel scale of each image. Associated mosaics have also been created and released to provide geologic context for the individual images. These products provide the science community with analysis-ready data that enable new investigations of Triton, increase accessibility to this unique data set, and continue to enhance the scientific return from the Voyager 2 mission.

Planetary Science Journal

A global ensemble of ocean wave climate statistics from contemporary wave reanalysis and hindcasts

There are numerous global ocean wave reanalysis and hindcast products currently being distributed and used across different scientific fields. However, there is not a consistent dataset that can sample across all existing products based on a standardized framework. Here, we present and describe the first coordinated multi-product ensemble of present-day global wave fields available to date. This dataset, produced through the Coordinated Ocean Wave Climate Project (COWCLIP) phase 2, includes general and extreme statistics of significant wave height ( H s ), mean wave period ( T m ) and mean wave direction ( θ m ) computed across 1980–2014, at different frequency resolutions (monthly, seasonally, and annually). This coordinated global ensemble has been derived from fourteen state-of-the-science global wave products obtained from different atmospheric reanalysis forcing and downscaling methods. This data set has been processed, under a specific framework for consistency and quality, following standard Data Reference Syntax, Directory Structures and Metadata specifications. This new comprehensive dataset provides support to future broad-scale analysis of historical wave climatology and variability as well as coastal risk and vulnerability assessments across offshore and coastal engineering applications.

Scientific Data

Pre-fieldwork surveys

In sea-level studies, initial surveys at the office or library can increase a project’s likelihood of success. Pre-fieldwork surveys should begin with a thorough review of prior research literature that appraises available data, identifies data gaps, and places the project objectives into a broader scientific context. Whereas peer reviewed journal articles may contain a wealth of research findings, often the most useful maps, historical documents, images, and other data critical for sea-level research are discovered by searching government files, libraries, museums, unpublished reports, or, increasingly, online digital data collections.

Book chapter

Geographic data from space

Space science has been called “the collection of scientific problems to which space vehicles can make some specific contributions not achievable by ground-based experiments.” Geography, the most spatial of the sciences, has now been marked as one of these “space sciences.” The National Aeronautics and Space Administration (NASA) is sponsoring an investigation to identify the Potential geographic benefits from the nation’s space program. This is part of NASA’s long-range inquiry to determine the kinds of scientific activities which might profitably be carried out on future space missions. Among such future activities which are now being planned by NASA are a series of manned earth orbital missions, many of which would be devoted to research. Experiments in physics, astronomy, geophysics, meteorology, and biology are being discussed for these long-range missions. The question which is being put to geographers is, essentially, what would it mean to geographic research to have an observation satellite (or many such satellites) orbiting the earth, gathering data about earth-surface features and environments?

Professional Geographer

Field methods, quality-assurance, and data management plan for water-quality activities and water-level measurements, Idaho National Laboratory, Idaho

Introduction Water-quality activities and water-level measurements conducted by the U.S. Geological Survey (USGS) Idaho National Laboratory (INL) Project Office coincide with the USGS mission of evaluating the quantity and quality of the Nation’s water resources. The activities are conducted in cooperation with the U.S. Department of Energy’s (DOE) Idaho Operations Office. Results of water-quality and hydraulic head research efforts are presented in various USGS and scientific journal publications (refer to Fisher, 2022). These data are stored internally in the Aquarius Time Series and Aquarius Samples databases and are publicly accessible through National Water Quality Monitoring Council (2025) and U.S. Geological Survey (2025). Data collected from our studies are used by researchers, Federal and State agencies, water management and regulatory organizations, as well as the public. This quality assurance plan (QAP) describes the methods and processes for field methods, data collection, data management, data auditing, and equipment management for both the water-quality and water-level programs at the USGS INL Project Office (hereto referred to as INL Project Office). A comprehensive quality assurance (QA) plan ensures that the processes defined in this document will guide the program staff to collect and publish reliable, useful, and defensible data products for stakeholders. This QAP supersedes previous versions of this document and is intended to complement the Quality Assurance and Data Management (QADM) Plan for the Idaho Water Science Center (IDWSC; Christopher Mebane and Lauren Zinsser, written commun., 2024).

Idaho

Evidence for the role of infectious disease in species extinction and endangerment

Infectious disease is listed among the top five causes of global species extinctions. However, the majority of available data supporting this contention is largely anecdotal. We used the IUCN Red List of Threatened and Endangered Species and literature indexed in the ISI Web of Science to assess the role of infectious disease in global species loss. Infectious disease was listed as a contributing factor in <4% of species extinctions known to have occurred since 1500 (833 plants and animals) and as contributing to a species' status as critically endangered in <8% of cases (2852 critically endangered plants and animals). Although infectious diseases appear to play a minor role in global species loss, our findings underscore two important limitations in the available evidence: uncertainty surrounding the threats to species survival and a temporal bias in the data. Several initiatives could help overcome these obstacles, including rigorous scientific tests to determine which infectious diseases present a significant threat at the species level, recognition of the limitations associated with the lack of baseline data for the role of infectious disease in species extinctions, combining data with theory to discern the circumstances under which infectious disease is most likely to serve as an agent of extinction, and improving surveillance programs for the detection of infectious disease. An evidence-based understanding of the role of infectious disease in species extinction and endangerment will help prioritize conservation initiatives and protect global biodiversity.

Conservation Biology

Methods for evaluating Gap Analysis Project habitat distribution maps with species occurrence data

The National Gap Analysis Project created species habitat distribution models for all terrestrial vertebrates in the United States to support conservation assessments and explore patterns of species richness. Those models link species to specific habitats throughout the range of each species. For most vertebrates, there are not enough occurrence data to drive inductive, range-wide species habitat distribution models at high spatial and thematic resolution. However, it is possible to use occurrence data for model evaluation. The combination of citizen science, formal species survey work, and digitized specimen archives are making millions of observations available to the scientific community. Our challenge is to combine the mostly unstructured data into metrics that help us characterize and understand patterns of biodiversity. In this work, we propose two model-evaluation metrics. The first, a buffer proportion assessment, is based on the proportion of habitat in the range relative to the mean proportion of habitat around each of the species’ occurrence records. The second is a measure of the sensitivity (proportion of true presence) to buffer distances around occurrence records. The buffer proportion is a modification of model prevalence versus point prevalence metric, whereby comparison to a null model allows us to determine if the model performs better or worse than random. In this report, we describe the workflow used to compile and filter the species occurrence records from online resources (for example, the Global Biodiversity Information Facility) and show results for a single species, Desmognathus quadramaculatus (black-bellied salamander). For the salamander, 222 occurrence points met our criteria for inclusion in the evaluation. We found the model performed better than random with a buffer proportion index of 1.745, indicating about 5 times as much habitat was found adjacent to known occurrence records than would be expected from randomly located sites throughout the range. Sensitivity increased with larger buffer distances and leveled off to around 0.7 between 1,000- and 2,000-meter buffer distances, indicating the model is likely best suited for scales exceeding 1,000 meters. We plan to report the buffer proportion assessment and sensitivity metrics along with the full species model reports to increase understanding of the model’s performance and to use the metrics to help prioritize revisions to the models.

Alabama, Georgia, North Carolina, Tennessee, Virgi

Magnetic monitoring of earth and space

For centuries, navigators of the world’s oceans have been familiar with an effect of Earth’s magnetic field: It imparts a directional preference to the needle of a compass. Although in some settings magnetic orientation remains important, the modern science of geomagnetismhas emerged from its romantic nautical origins and developed into a subject of great depth and diversity. The geomagnetic field is used to explore the dynamics of Earth’s interior and its surrounding space environment, and geomagnetic data are used for geophysical mapping, mineral exploration, risk mitigation, and other practical applications. A global distribution of ground-based magnetic observatories supports those pursuits by providing accurate records of the magnetic-field direction and intensity at fixed locations and over long periods of time. Magnetic observatories were first established in the early 19th century in response to the influence of Alexander von Humboldt and Carl Friedrich Gauss. Since then, magnetic measurement has advanced significantly, progressing from simple visual readings of magnetic survey instruments to include automatic photographic measurement and modern electronic acquisition. To satisfy the needs of the scientific community, observatories are being upgraded to collect data that meet ever more stringent standards, to achieve higher acquisition frequencies, and to disseminate data in real time. To appreciate why data from magnetic observatories can be used for so many purposes, one needs only to recall that the geomagnetic field is a continuum, connecting the different parts of Earth to each other and to nearby space. Beneath our feet and above our heads, electric currents generate magnetic fields that contribute to the totality of the geomagnetic field measured at an observatory on Earth’s surface. The many physical processes that operate in each geophysical domain give rise to a complicated field that exhibits a wide variety of time-dependent behavior. In this article I review the status of the global community of magnetic observatories, show how Earth and space can be monitored for purposes of scientific understanding and practical application, and highlight the role played by magnetic observatories in the history of geomagnetism research.

Physics Today