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USGS2014

Surface wave site characterization at 27 locations near Boston, Massachusetts, including 2 strong-motion stations

The geotechnical properties of the soils in and around Boston, Massachusetts, have been extensively studied. This is partly due to the importance of the Boston Blue Clay and the extent of landfill in the Boston area. Although New England is not a region that is typically associated with seismic hazards, there have been several historical earthquakes that have caused significant ground shaking (for example, see Street and Lacroix, 1979; Ebel, 1996; Ebel, 2006). The possibility of strong ground shaking, along with heightened vulnerability from unreinforced masonry buildings, motivates further investigation of seismic hazards throughout New England. Important studies that are pertinent to seismic hazards in New England include source-parameter studies (Somerville and others, 1987; Boore and others, 2010), wave-propagation studies (Frankel, 1991; Viegas and others, 2010), empirical ground-motion prediction equations (GMPE) for computing ground-motion intensity (Tavakoli and Pezeshk, 2005; Atkinson and Boore, 2006), site-response studies (Hayles and others, 2001; Ebel and Kim, 2006), and liquefaction studies (Brankman and Baise, 2008). The shear-wave velocity (VS) profiles collected for this report are pertinent to the GMPE, site response, and liquefaction aspects of seismic hazards in the greater Boston area. Besides the application of these data for the Boston region, the data may be applicable throughout New England, through correlations with geologic units (similar to Ebel and Kim, 2006) or correlations with topographic slope (Wald and Allen, 2007), because few VS measurements are available in stable tectonic regions. Ebel and Hart (2001) used felt earthquake reports to infer amplification patterns throughout the greater Boston region and noted spatial correspondence with the dominant period and amplification factors obtained from ambient noise (horizontal-to-vertical ratios) by Kummer (1998). Britton (2003) compiled geotechnical borings in the area and produced a microzonation map based on generalized velocity profiles, where the amplifications were computed using Shake (Schnable and others, 1972), along with an assumed input ground motion. The velocities were constrained by only a few local measurements associated with the Central Artery/Tunnel project. The additional VS measurements presented in this report provide a number of benefits. First, these measurements provide improved spatial coverage. Second, the larger sample size provides better constraints on the mean and variance of the VS distribution for each layer, which may be paired with a three-dimensional (3D) model of the stratigraphy to generate one-dimensional (1D) profiles for use in a standard site-response analysis (for example, Britton, 2003). Third, the velocity profiles may also be used, along with a 3D model of the stratigraphy, as input into a 3D simulation of the ground motion to investigate the effects of basin-generated surface waves and the potential focusing of seismic waves. This report begins with a short review of the geology of the study area and the field methods that we used to estimate the velocity profiles. The raw data, processed data, and the interpreted VS profiles are given in appendix 1. Photographs and descriptions of the sites are provided in appendix 2.

Massachusetts↗

USGS1994

Selected contributions to ground-water hydrology by C.V. Theis, and a review of his life and work

This publication highlights two previously unpublished papers by C.V. Theis; each is augmented with a discussion that explains why he wrote the paper, attempts to discern why he did not publish the paper, and amplifies the information with reference material not included by Theis. 'A Primer on Anisotropy' was written in the early 1970's to provide practicing hydrogeologists of the day with a method of analyzing ground-water problems involving anisotropic hydraulic-conductivity distribution without using tensor mathematics. The equations were developed for horizontal flow through dipping beds with differing conductivities parallel and perpendicular to the bedding and for flow through dipping beds having three different hydraulic conductivities, one perpendicular to the bedding and two others parallel to the bedding, at an angle to the strike of the beds. Although most colleagues who reviewed the primer in the early 1970's encouraged its publication enthusiastically, at least one suggested the addition of some examples in which the method would be demonstrated. Handwritten notes from Theis' files indicate that he may have worked on some examples and possibly other additions to the paper. The comments by Charles A. Appel include some examples of the primer's use and augment the presentation with references to relevant published papers, both those available to Theis but not cited by him, and subsequent publications. 'Aquifers, Ground-Water Bodies, and Hydrophers' was written in the early 1980's as an attempt to clarify the semantic and conceptual confusion in the use of the term aquifer, applied by some investigators to the saturated part of a permeable formation and by others to the entire permeable formation. The physical distinction between the aquifer and the ground-water body is emphasized, and the term hydropher is proposed to describe the saturated part of a permeable formation. Theis' interest in and familiarity with the French literature on ground water was the basis for a discussion of the French usage, which eschews the term aquifer. The analysis and critique of Theis' palzler explains the 1835 paper from which aquifer was reportedly derived, and provides further justification for the term hydropher. Theis' more important contributions to ground-water hydrology were outgrowths of his solutions to small local water problems based on field investigations. The biographical sketch, drawing extensively from a partial autobiography that Theis had dictated, reveals both the reasons for and the intellectual processes that led to his development of the nonequilibrium concept of ground-water hydraulics. The sketch also describes the background of the man, reviews his career, and portrays the admiration and respect he elicited from his colleagues and associates. The magnitude of Theis' contribution to the science of ground-water hydrology, to the appraisal of the water resources of New Mexico, and to the early research on ground disposal of radioactive wastes is evident from the bibliography of his writings, which includes 168 reports, many of them unpublished. The evolution of his thinking about the role of geologic inhomogeneities in mass transport, conceptualized but not quantified, was the major contribution of the latter part of his career.

Water Supply Paper↗

USGS2015

Aeromagnetic survey map of Sacramento Valley, California

Three aeromagnetic surveys were flown to improve understanding of the geology and structure in the Sacramento Valley. The resulting data serve as a basis for geophysical interpretations, and support geological mapping, water and mineral resource investigations, and other topical studies. Local spatial variations in the Earth's magnetic field (evident as anomalies on aeromagnetic maps) reflect the distribution of magnetic minerals, primarily magnetite, in the underlying rocks. In many cases the volume content of magnetic minerals can be related to rock type, and abrupt spatial changes in the amount of magnetic minerals commonly mark lithologic or structural boundaries. Bodies of serpentinite and other mafic and ultramafic rocks tend to produce the most intense positive magnetic anomalies (for example, in the northwest part of the map). These rock types are the inferred sources, concealed beneath weakly magnetic, valley-fill deposits, of the most prominent magnetic features in the map area, the magnetic highs that extend along the valley axis. Cenozoic volcanic rocks are also an important source of magnetic anomalies and coincide with short-wavelength anomalies that can be either positive (strong central positive anomaly flanked by lower-amplitude negative anomalies) or negative (strong central negative anomaly flanked by lower-amplitude positive anomalies), reflecting the contribution of remanent magnetization. Rocks with more felsic compositions or even some sedimentary units also can cause measurable magnetic anomalies. For example, the long, linear, narrow north-trending anomalies (with amplitudes of <50 nanoteslas [nT]) along the western margin of the valley coincide with exposures of the Mesozoic Great Valley sequence. Note that isolated, short-wavelength anomalies, such as those in the city of Sacramento and along some of the major roads, are caused by manmade features.

California↗

USGS2009

Klamath River Water Quality Data from Link River Dam to Keno Dam, Oregon, 2008

This report documents sampling and analytical methods and presents field data from a second year of an ongoing study on the Klamath River from Link River Dam to Keno Dam in south central Oregon; this dataset will form the basis of a hydrodynamic and water quality model. Water quality was sampled weekly at six mainstem and two tributary sites from early April through early November, 2008. Constituents reported herein include field-measured water-column parameters (water temperature, pH, dissolved oxygen concentration, specific conductance); total nitrogen and phosphorus; particulate carbon and nitrogen; total iron; filtered orthophosphate, nitrite, nitrite plus nitrate, ammonia, organic carbon, and iron; specific UV absorbance at 254 nanometers; chlorophyll a; phytoplankton and zooplankton enumeration and species identification; and bacterial abundance and morphological subgroups. Sampling program results indicated: *Most nutrient and carbon concentrations were lowest in spring, increased starting in mid-June, remained elevated in the summer, and decreased in fall. Dissolved nitrite plus nitrate had a different seasonal cycle and was below detection or at low concentration in summer. *Although total nitrogen and total phosphorus concentrations did not show large differences from upstream to downstream, filtered ammonia and orthophosphate concentrations increased in the downstream direction and particulate carbon and particulate nitrogen generally decreased in the downstream direction. *Large bacterial cells made up most of the bacteria biovolume, though cocci were the most numerous bacteria type. Cocci, with diameters of 0.1 to 0.2 micrometers, were smaller than the filter pore sizes used to separate dissolved from particulate matter. *Phytoplankton biovolumes were dominated by diatoms in spring and by the blue-green alga Aphanizomenon flos-aquae after mid-June. Another blue-green, Anabaena flos-aquae, was noted in samples from late May to late June. Phytoplankton biovolumes generally were highest at the upstream Link River and Railroad Bridge sites and decreased in the downstream direction. *Zooplankton densities were largest in late April. Populations were dominated by rotifers and copepods in early spring, and by rotifers and cladocerans in summer, with cladocerans most common at the most upstream site.

Open-File Report↗

USGS1980

Effect of delayed reporting of band recoveries on survival estimates

Brownie et al. (U.S. Fish and Wildl. Serv., Resource Publ. 131, 1978) presented 14 models based on an array of explicit assumptions for the study of survival in avian populations. These methods are replacing the life table methods previously used to estimate survival rates (e.g., Burnham and Anderson, J. Wildl. Manage. , 43: 356-366, 1979). The new methods allow survival or recovery rates, or both, to be constant, time-specific, or time- and age-specific. In studies to estimate survival rates for birds the data are often from recoveries of birds shot or found dead during the hunting season and reported to the Bird Banding Laboratory by sportsmen, conservation agency employees, or the general public. This note examines the bias in estimating annual survival due to a proportion of the recoveries being incorrectly reported a year late. Specifically, a few recoveries each year of, for example, adult male American Widgeon ( Anas americana ) banded in California are reported as being recovered in year i + 1 when in fact they were actually recovered the previous year i. Delayed reporting might typically be caused by people finding a band in their health clothing in the fall of the year and, being embarrassed about their failure to report the band when it was taken, report it a year late not mentioning the actual year of recovery. Heuristically, delayed reporting should bias estimated annual survival rates upwards because it appears from the data that the birds corresponding to the "delayed" recoveries actually lived an additional year.

Journal of Field Ornithology↗

USGS2001

Dips, ramps, and rolls- Evidence for paleotopographic and syn-depositional fault control on the Western Kentucky No. 4 coal bed, tradewater formation (Bolsovian) Illinois Basin

The Western Kentucky No. 4 coal is a high-volatile B to high-volatile C bituminous coal that has been heavily mined along the southern margin of the Western Kentucky Coal Field. The seam has a reputation for rolling floor elevation. Elongate trends of floor depressions are referred to as "dips" and "rolls" by miners. Some are relatively narrow and straight to slightly curvilinear in plan view, with generally symmetric to slightly asymmetric cross-sections. Others are broader and asymmetric in section, with sharp dips on one limb and gradual, ramp-like dips on the other. Some limbs change laterally from gradual dip, to sharp dip, to offset of the coal. Lateral changes in the rate of floor elevation dip are often associated with changes in coal thickness, and in underground mines, changes in floor elevation are sometimes associated with roof falls and haulage problems. In order to test if coal thickness changes within floor depressions were associated with changes in palynology, petrography and coal quality, the coal was sampled at a surface mine across a broad. ramp-like depression that showed down-dip coal thickening. Increment samples of coal from a thick (150 cm), down-ramp and thinner (127 cm), up-ramp position at one surface mine correlate well between sample sites (a distance of 60 m) except for a single increment. The anomalous increment (31 cm) in the lower-middle part of the thick coal bed contained 20% more Lycospora orbicula spores. The rolling floor elevations noted in the study mines are inferred to have been formed as a result of pre-peat paleotopographic depressions, syn-depositional faulting, fault-controlled pre-peat paleotopography, and from compaction beneath post-depositional channels and slumps. Although the association of thick coal with linear trends and inferred faults has been used in other basins to infer syn-depositional faulting, changes in palynology within increment samples of the seam along a structural ramp in this study provide subtle evidence of faulting within a specific increment of the coal itself. The sudden increase in L. orbicula (produced by Paralycopodites) in a single increment of a down-ramp sample of the Western Kentucky No. 4 coal records the reestablishment of a rheotrophic mire following a sudden change in edaphic conditions. Paralycopodites was a colonizing lycopod, which in this case became locally abundant after the peat was well established along a fault with obvious growth during peat accumulation. Because many coal-mire plants were susceptible to sudden edaphic changes as might accompany faulting or flooding, changes in palynology would be expected in coals affected by syn-depositional faulting. ?? 2001 Elsevier Science B.V. All rights reserved.

International Journal of Coal Geology↗

USGS1969

Analysis of a 24-Year photographic record of Nisqually glacier, Mount Rainier National Park, Washington

A systematic coverage of Nisqually Glacier by photographs taken from a network of stations on the ground was begun in 1942 to explore the value and limitations of such photographs as an aid in glacier study. Principles developed may be of value elsewhere, especially for the program 'Measurement of Glacier Variations on a World-Wide Basis' of the International Hydrological Decade. Nisqually Glacier in Mount Rainier National Park, Wash., covers 2.5 square miles (6.5 square kilometers) (1961) and extends from an altitude of about 14,300 feet (4,400 meters) near the top of Mount Rainier down to 4,700 feet (1,400 meters), in a horizontal distance of 4.1 miles (6.6 kilometers). Analyses were made of the annual photographs taken by the writer for 24 years from about 20 stations. A number of pictures taken sporadically from 1884 to 1941 by others were also available for use in the study. Where possible, the results obtained from photographs were compared with those from the available engineering surveys. Such detailed analysis of an extensive photographic coverage of a single glacier may be unique. Photographs illustrating the retreat and advance of the glacier's west ice margin in a reach extending for about a mile (1.6 kilometers) downstream from Wilson Glacier show that, by 1965, most of the ice thickness lost in that area between 1890 and 1944 had been recovered. Withering of the stagnant valley tongue down glacier from the nunatak is portrayed, as is its spectacular reactivation in the 1960's by a vigorous advance of fresh ice. Some of the visible characteristics of advancing and receding termini are noted. Annual values of the glacier's surface slope (5 to 10 degrees) at a cross profile were measured on photographs with respect to a projected vertical line identifiable in each picture. The results were found to average about 2 degrees less than those obtained from the 5-year topographic maps, but they are thought to be a little more accurate owing to lack of a sufficiently small contour interval on the maps for this special purpose. Year-to-year variations in the surface slope and other characteristics from place to place along the glacier are portrayed by pictures to a degree not economically attainable by any other means. Annual changes in the glacier's thickness at two locations were determined from photographs and found to agree well with the results of stadia surveys. A summary of conclusions reached in regard to other data or features of the glacier that were illustrated by annual photographs follows: 1. Toward the end of the ablation season, position of the annual snowline ranged between altitudes of about 5,800 and 7,300 feet (1,750 and 2,250 meters). The altitude limits within which firn was observed on the glacier were about 6,000 and 7,300 feet (1,850 and 2,250 meters). 2. Sources from which debris reaches the glacier are evident. 3. Medial moraines and other persistent patterns sometimes overlooked in the field are more noticeable in photographs. Ice-cored moraines and patterns of multiple lateral moraines are visible. 4. The extent, severity, and nature of crevassing in an area reflect the dynamic condition of the glacier at that location. 5. Erosion has caused certain bedrock areas or features on canyon walls to become unrecognizable within less than 15 years. 6. Effects of the 1932 and 1955 outburst floods on the stream channel and trees for a mile (1.6 kilometers) or so below the glacier are shown in comparison with ordinary, lesser floods. Visible effects include degradation, widening and changes in configuration of the channel, formation of small terraces, removal of vegetation from the flood plain, and the deposition of huge boulders on the stream banks and flood plain. Some photographic procedures recommended for use in a program of this type are described in the section on "Recommended Photographic Procedures."

Washington↗

USGS2005

Geologic map of the northern plains of Mars

The northern plains of Mars cover nearly a third of the planet and constitute the planet's broadest region of lowlands. Apparently formed early in Mars' history, the northern lowlands served as a repository both for sediments shed from the adjacent ancient highlands and for volcanic flows and deposits from sources within and near the lowlands. Geomorphic evidence for extensive tectonic deformation and reworking of surface materials through release of volatiles occurs throughout the northern plains. In the polar region, Planum Boreum contains evidence for the accumulation of ice and dust, and surrounding dune fields suggest widespread aeolian transport and erosion. The most recent regional- and global-scale maps describing the geology of the northern plains are largely based on Viking Orbiter image data (Dial, 1984; Witbeck and Underwood, 1984; Scott and Tanaka, 1986; Greeley and Guest, 1987; Tanaka and Scott, 1987; Tanaka and others, 1992a; Rotto and Tanaka, 1995; Crumpler and others, 2001; McGill, 2002). These maps reveal highland, plains, volcanic, and polar units based on morphologic character, albedo, and relative ages using local stratigraphic relations and crater counts. This geologic map of the northern plains is the first published map that covers a significant part of Mars using topography and image data from both the Mars Global Surveyor and Mars Odyssey missions. The new data provide a fresh perspective on the geology of the region that reveals many previously unrecognizable units, features, and temporal relations. In addition, we adapted and instituted terrestrial mapping methods and stratigraphic conventions that we think result in a clearer and more objective map. We focus on mapping with the intent of reconstructing the history of geologic activity within the northern plains, including deposition, volcanism, erosion, tectonism, impact cratering, and other processes with the aid of comprehensive crater-density determinations. Mapped areas include all plains regions within the northern hemisphere of Mars, as well as an approximately 300-km-wide strip of cratered highland and volcanic regions, which border the plains. Note that not all of the contiguous northern plains are mapped, because some minor parts of Elysium and Amazonis Planitiae lie south of the equator.

Scientific Investigations Map↗

USGS2025

Triangulating habitat suitability for the locally extirpated California grizzly bear

Reintroducing locally extirpated wildlife species is often necessary to meet recovery goals. However, because current field data cannot be gathered about these species, efforts to identify suitable habitat are often complicated and controversial. Here we present a case study examining a novel approach for identifying suitable habitat for the locally extirpated brown bear, known as the “grizzly,” in California, USA. Once home to a large population of grizzlies, the last credible sighting of a grizzly in California was in 1924, but recent discussions have explored a reintroduction. To study potential grizzly bear habitat suitability in California, we use a multi-model approach in which we consider three indirect methods, or “analogies,” each of which incorporates both environmental and social variables. In the “historical analogy,” we used a unique record of human encounters and museum specimens to build a habitat model of grizzlies in California 150 years ago. In the “geographic analogy,” we used data about contemporary brown bears in Europe and North America to identify potential suitable habitat in California. In the “taxonomic analogy,” we examined data from other large carnivores currently extant in California to draw conclusions about grizzlies. Because these methods yield varying results, we adopt a process known in the social sciences as “triangulation” to compare them. We show that a triangulation approach can improve our understanding of potential suitable habitat, clarifying the strengths and weaknesses of various methods and producing robust yet conservative estimates. Our findings suggest that large areas of suitable habitat for grizzlies exist in California. However, we note that place-based social science research and long-term investment in co-existence would be necessary to maintain suitability. The “analogy and triangulation” approach demonstrates the value of multi-model approaches for habitat suitability, especially for reintroductions.

California↗

USGS1971

Analysis of current-meter data at Columbia River gaging stations, Washington and Oregon

The U.S. Geological Survey developed equipment to measure stream velocity simultaneously with 10 current meters arranged in a vertical and to measure velocity closer to the streambed than attainable with conventional equipment. With the 10 current meters, synchronous velocities were recorded for a period of 66 minutes at 10 different depths in one vertical of one gaging-station cross section. In addition, with a current meter installed on a special bracket to allow measurements to 0.5 foot above streambed, data were obtained at two to four verticals in four gaging-station cross sections. The mean velocity determined for the 66-minute period of record was 3.30 fps (feet per second). The graphic record of velocity was analyzed on a minute-by-minute basis. It was noted that the shape of the vertical velocity curves (plot of horizontal flow velocities measured in a vertical) changed from one minute to the next, but the change seemed to be random. Velocities obtained at different depths in the, profile fluctuated significantly, with the 1-minute velocities obtained at 0.05 depth (5 percent of total depths measured from the surface at indicated vertical) showing the smallest range--0.66 fps--and those at 0.55 depth the largest range--l.22 fps. The standard deviation, expressed in feet per second, of the velocity at each point in the vertical tended to increase with depth--from 0.16 fps at 0.05 depth to a maximum of 0.24 fps at 0.75 depth. The standard deviation, expressed as a percentage of the mean velocity, ranged from about 4 percent near the surface to 11 percent at 0.95 depth. In spite of the fluctuation in mean velocity that occurred during the 66 minutes and observation period of 4 minutes yields a mean velocity that differs from the 66-minute mean by less than one-half of a percent. Determining the mean velocity by averaging the 10-point observations of the 66minute run proved to be as accurate as by plotting the vertical velocity curvy (from the averaged 10 points) and then integrating the depth-velocity profile. In comparing the velocity obtained by integrating the depth-velocity profile with the 10-point mean velocity for other field data, collected beyond that obtained during the 66-minute run, the difference ranged from -1.3 to +1.7 percent and averaged -0.2 percent. Extension of the curve below the 0.95 depth by use of a power function proved to be fairly accurate (when compared with actual measurements within this reach made with the special current-meter bracket). However, the extension did not improve significantly the accuracy of the integrated-curve mean velocity. Both the one- and two-point methods were found to agree with the 10-point velocity. In computing mean river velocity, values determined by the two-point method ranged from -1.4 to +1.6 percent when compared with the base integrated-curve mean river velocity. The one-point method yielded results that ranged from -1.9 to +4.4 percent and averaged 40.1 percent. In determining river flow by use of the midsection and mean-section methods, the mean-section method uniformly yields lower flows for the same dart.. The range in difference is from -0.2 percent to -1.6 percent, with an average difference of -0.6 percent.

Water Supply Paper↗

USGS2021

SSA task force on diversity, equity, and inclusion: Toward a changing, inclusive future in earthquake science

In the United States, a wide variety of studies show that the geoscience community does not reflect the broader societal makeup (e.g., Velasco and Jaurrieta de Velasco, 2010; Dutt, 2020; Howley, 2020). In fact, only about 10% of all Science, Technology, Engineering, and Mathematics (STEM) Ph.D. degrees are awarded to people of color, although they represent more than a third of the population (Dutt, 2020). These numbers have changed little over the past 40 yr (e.g., Bernard and Cooperdock, 2018; Dutt, 2020). Recent events in the United States have again raised awareness of this discrepancy in many fields; similar divergences may be present throughout the world. This discrepancy represents a tremendous loss of talent and contributes to ongoing bias and racism. As the premier international seismological professional society, Seismological Society of America (SSA) is committed, as stated in its ethics policy, to “freedom and transparency in research and education, which should be conducted in a supportive, inclusive, and respectful environment, free from any discrimination, harassment or bullying.” SSA convened the SSA Diversity, Equity, and Inclusion (DEI) Task Force to identify specific and actionable recommendations that the Society can take to start to address the significant issues surrounding the systematic underrepresentation in seismology and related geosciences by marginalized groups on both short- and long- term time horizons. This report, written by the Task Force, outlines actionable items that SSA can undertake as well as a framework by which progress can be measured to help guide the Society and its members forward as a community to make earthquake science more just, equitable, diverse, and inclusive. We recognize that this document cannot address the multiple individual, cultural, and historical barriers that some members may face (e.g., Núñez et al., 2020), nor can it reflect all possibilities or all recommended practices (e.g., Ali et al., 2021). What this document does represent, however, is the beginning of what we hope to be a significant cultural change in how we conduct earthquake science as an organization, not the end of this process as the Task Force fulfills its charter. As a note, some of the recommendations that the Task Force has outlined here have already been implemented within SSA or are actively being considered. For completeness, we still include them here because this highlights the commitment to change that SSA leadership has embraced.

Seismological Research Letters↗

USGS2026

Evaluation of turbidity corrections for EXO fluorescent dissolved organic matter (fDOM) sensors

Executive Summary The use of field-deployable fluorescence sensors to better understand dissolved organic matter concentrations and composition has grown immensely in recent years. Applications of these sensors to critical monitoring efforts have also grown, encompassing post-fire monitoring, wastewater tracking, and use as a proxy for various contaminants. Despite the growth, it is well known that these sensors require corrections for temperature (Watras and others, 2011) and are subject to many light-field interferences caused by both scattering and absorbance due to dissolved and particulate substances (Downing and others, 2012; Lee and others, 2015; Booth and others, 2023). The most common fluorescence sensors used by the U.S. Geological Survey (USGS) include those targeting fluorescent dissolved organic matter (fDOM) and chlorophylls. Because fDOM sensors primarily measure fluorescence in the dissolved to colloidal phases, corrections to the interferences caused by particulates can be made relatively easily. By the end of 2024, the USGS had 69 fDOM sensors deployed within official water quality monitoring networks included on the USGS National Water Dashboard ( https://dashboard.waterdata.usgs.gov/app/nwd/en/ ) and numerous others used in surveys and research applications across the Nation. Although temperature corrections are widely applicable across sensor models, interference corrections can be model specific due to differences in design specifications across manufacturers and models (Booth and others, 2023). The corrections are also potentially subject to changes in manufacturing within a specific sensor model. Recently, USGS staff obtained information regarding possible changes in the manufacturing of its most widely-used fDOM sensor model, raising concerns about data consistency and quality in the USGS fDOM sensor networks. Furthermore, changes in turbidity sensors since the corrections guidance was performed may also affect the performance of the corrections. The turbidity sensor used in the original experiments (Downing and others, 2012) was determined to have a signal output approximately 1.3 times higher than the output of the turbidity sensor currently used in an extensive field comparison study (Messner and others, 2023). With these changes, it is imperative that the corrections be reevaluated to maintain data consistency and continuity across the USGS. In this study, we evaluated turbidity corrections for fDOM sensors over a range of serial numbers covering manufacturing dates 2015 through 2022 and turbidity serial numbers covering the range 2013 through 2022. The goal was to determine whether reported changes in the manufacturing process of the fDOM and turbidity sensors affected the correction approach developed by Downing and others (2012) such that additional guidance would be required to address this manufacturing change. To evaluate, we repeated a laboratory-based test similar to that performed by Downing and others (2012) in which a series of tank experiments with multiple sensors were deployed in a suspension of Elliot Silt Loam (ESL). High turbidities of the ESL suspension were maintained throughout the tank by turbulent recirculation using submersible pumps. Particulates were removed using a recirculated line equipped with a capsule filter (0.45 micron). Measurements were collected throughout the filtration until turbidities reached approximately 5 formazin nephelometric units (FNU; data available in Baxter and others, 2023). Each experimental run included a mixture of unique sensor combinations to account for variability imposed by the turbidity and temperature sensors. The fDOM correction factor was calculated for each combination of fDOM and turbidity sensors included in the test. We observed no systematic change in fDOM correction coefficients across serial numbers representing manufacturing years 2015 through 2022. However, the results highlighted questions raised about the corrections for high-turbidity samples, as noted in USGS Techniques and Methods (Booth and others, 2023). Applying the inverse of the commonly-used fDOM ratio with a quadratic fit performed better than the exponential fits when correcting fDOM data for turbidity in the ESL laboratory filtration test and generated a simple scale factor correction equation. This approach also served as a better indicator of data quality than the exponential fit approach. Similar to fDOM, more rigorous quality assurance measures may be necessary to evaluate turbidity sensor calibrations and performance. Sensors exceeding a certain age may need to be replaced despite passing quality assurance checks during calibration. Further testing of the turbidity corrections for different sediment and water types is warranted to better understand the variations in the fits and correctable ranges of turbidity in different systems.

Open-File Report↗

USGS2024

Density estimation using spatial capture-recapture analyses: Application to vaccination of prairie dogs against sylvatic plague

Prairie dogs are notoriously difficult to enumerate, with previously methods including visual counts, mark-resight, burrow counts, and catch per unit effort. Unlike those methods, spatial capture-recapture (SCR) analyses allow for formal estimation of density along with associated estimates of uncertainty, detection probability, and the size of the average area over which an individual was detected during the study period (referred to as an activity center). Using SCR analyses, we compared density estimates as part of a field trial evaluating the effectiveness of an oral sylvatic plague vaccine in black-tailed prairie dogs ( Cynomys ludovicianus ), Gunnison's prairie dogs ( C. gunnisoni ), white-tailed prairie dogs ( C. leucurus ), and Utah prairie dogs ( C. parvidens ) at 11 study areas in the western United States. The study was designed as a matched pairs analysis that included 27 individual paired plots (54 plots), each consisting of a plot treated with vaccine baits and a plot treated with placebo baits. Overall, we captured >3,000 individuals each year on these plots, and recapture rates ranged from 5–87%. For black-tailed prairie dogs, density estimates ranged from 2.7 individuals/ha (95% CI = 2.2–3.3/ha) to 77.3/ha (63.2–94.4/ha), and for Gunnison's prairie dogs, estimates ranged from 11.7/ha (10.6–12.8/ha) to 15.4/ha (14.4–16.7/ha). White-tailed prairie dogs were at their lowest density (3.3/ha, 95% CI = 2.9–3.8/ha) during the first year of the study and their highest density (14.5/ha; 13.5–15.6/ha) during the last year of the study. Utah prairie dog density estimates ranged from a low of 4.0/ha (95% CI = 3.55–4.6/ha) to a high of 20.8/ha (16.8–25.8/ha). Best-fitting models of prairie dog density indicated increasing patterns of density over time on most study plots, negative effects of plague, and positive effects of vaccination. Finally, we found low correlations between catch per unit effort estimates from previous published literature at these sites and our densities estimates. Spatial capture-recapture estimates allowed us to consistently compare treatment effects across space and time, although some exceptions are noted where we observed significant movement between plots within a pair (3 pairs) and when trapping effort between plots or years was not consistent.

Arizona, Colorado, Montana, South Dakota, Utah, Wy↗

USGS1995

Acidic deposition ("acid rain")

Acidic deposition, or "acid rain," describes any form of precipitation, including rain, snow, and fog, with a pH of 5.5 or below (Note: pH values below 7 are acidic; vinegar has a pH of 3). It often results when the acidity of normal precipitation is increased by sulfates and nitrates that are emitted into the atmosphere from burning fossil fuels. This form of airborne contamination is considered harmful, both directly and indirectly, to a host of plant and animal species. Although acid rain can fall virtually anywhere, ecological damages in environmentally sensitive areas downwind of industrial and urban emissions are a major concern. This includes areas that have a reduced capacity to neutralize acid inputs because of low alkalinity soils and areas that contain species with a low tolerance to acid conditions. To determine the distribution of acidic deposition and evaluate its biological effects, research and monitoring are being conducted by the federal government with support from states, universities, and private industry. The national extent of the acid rain problem has been estimated by sampling water from 3,000 lakes and 500 streams (Irving 1991), representing more than 28,000 lakes and 56,000 stream reaches with a total of 200,000 km (125,000 mi). Some particularly sensitive areas, such as the Adirondack Mountain region, have been more intensively sampled and the biota examined in detail for effects from acidity. To identify trends in aquatic ecosystems, present and historical survey data on water chemistry and associated biota are compared. In lakes, the chemical and biological history and pH trends may be inferred or reconstructed in some cases by examining assemblages of fossil diatoms and aquatic invertebrates in the sediment layers. In terrestrial ecosystems, vegetation damage is surveyed and effects of acidic deposition to plants and animals are determined from laboratory and field exposure experiments. Natural variation in populations and the complex interactions between acidity and other ecosystem components make it difficult to extend many of the research findings to populations or communities. Acidity can also modify ecosystem processes such as decomposition and the flow of nutrients. Therefore, models are often used to predict such effects by combining information on individual species' effects, population distributions, and the patterns and amounts of acidic deposition.

Book chapter↗

USGS2017

Evaluation of hypotheses for right-lateral displacement of Neogene strata along the San Andreas Fault between Parkfield and Maricopa, California

We used geological field studies and diatom biostratigraphy to test a published hypothesis that Neogene marine siliceous strata in the Maricopa and Parkfield areas, located on opposite sides of the San Andreas Fault, were formerly contiguous and then were displaced by about 80–130 kilometers (km) of right-lateral slip along the fault. In the Maricopa area on the northeast side of the San Andreas Fault, the upper Miocene Bitterwater Creek Shale consists of hard, siliceous shale with dolomitic concretions and turbidite sandstone interbeds. Diatom assemblages indicate that the Bitterwater Creek Shale was deposited about 8.0–6.7 million years before present (Ma) at the same time as the uppermost part of the Monterey Formation in parts of coastal California. In the Parkfield area on the southwest side of the San Andreas Fault, the upper Miocene Pancho Rico Formation consists of soft to indurated mudstone and siltstone and fossiliferous, bioturbated sandstone. Diatom assemblages from the Pancho Rico indicate deposition about 6.7–5.7 Ma (latest Miocene), younger than the Bitterwater Creek Shale and at about the same time as parts of the Sisquoc Formation and Purisima Formation in coastal California. Our results show that the Bitterwater Creek Shale and Pancho Rico Formation are lithologically unlike and of different ages and therefore do not constitute a cross-fault tie that can be used to estimate rightlateral displacement along the San Andreas Fault. In the Maricopa area northeast of the San Andreas Fault, the Bitterwater Creek Shale overlies conglomeratic fan-delta deposits of the upper Miocene Santa Margarita Formation, which in turn overlie siliceous shale of the Miocene Monterey Formation from which we obtained a diatom assemblage dated at about 10.0–9.3 Ma. Previous investigations noted that the Santa Margarita Formation in the Maricopa area contains granitic and metamorphic clasts derived from sources in the northern Gabilan Range, on the opposite side of the San Andreas Fault, that have moved relatively northwestward by 254 ± 5 km of right-lateral displacement along the fault. Our new diatom ages suggest that Santa Margarita deposition and fault displacement began about 10–8 Ma and imply long-term average slip rates along the San Andreas Fault of about 25–32 millimeters per year (mm/yr), Evaluation of Hypotheses for Right-Lateral Displacement of Neogene Strata Along the San Andreas Fault Between Parkfield and Maricopa, California By Richard G. Stanley, John A. Barron, and Charles L. Powell, II about the same as published estimates of Quaternary average slip rates based on geologic and geodetic studies.

California↗

USGS2019

Integration of microfacies analysis, inorganic geochemical data, and hyperspectral imaging to unravel mudstone depositional and diagenetic processes in two cores from the Triassic Shublik Formation, Northern Alaska

The Middle – Upper Triassic Shublik Formation is an organic-rich heterogeneous carbonate-siliciclastic-phosphatic unit that generated much of the oil in the Prudhoe Bay field and other hydrocarbon accumulations in northern Alaska. A large dataset, including total organic carbon (TOC), X-ray diffraction (XRD), X-ray fluorescence (XRF) and inductively coupled plasma – mass spectrometry (ICP-MS) measurements, has been built from core and outcrop samples of the Shublik, with a focus on the organic-rich intervals. In addition, two core intervals from the Shublik were analyzed using a hyperspectral imaging system in the visible, near-infrared and shortwave-infrared range. Integration of the hyperspectral results with core descriptions, microfacies interpretations, and analytical data is being used to decipher mudstone depositional and diagenetic processes. Petrographic analysis of Upper Triassic organic-rich intervals within the Shublik suggests that the main microfacies is a laminated bioclastic wackestone/packstone that was episodically disrupted by energetic events of variable intensity. These energetic events produced transitional and sparry calcite bioclastic packstone to grainstone intervals, depending on the depth of sediment column disturbance. By using hyperspectral imaging data from the Ikpikpuk core, individual distribution maps for minerals of interest have been generated and corroborate the microfacies interpretations. These maps also illustrate small-scale vertical changes in mineralogy. The laminated bioclastic wackestone/packstone intervals contain less calcite than the adjacent sparry bioclastic packstone to grainstone intervals. The calcite in these laminated intervals is more iron rich. This interpretation suggests that lower iron concentrations should be expected in the disrupted intervals than in nearby laminated intervals. Textural features are also enhanced in the hyperspectral images relative to visual description of the cores by combining the extraction of the average reflectance in the visible part of the electromagnetic spectrum and the depth of the main carbonate-related feature belonging to calcite. Examples noted in the enhanced imagery include low-angle features, calcite grain-size, and the size, shape and orientation of phosphatic nodules. This enhancement is being used to differentiate laminated from sparry bioclastic packstone to grainstone-rich intervals and provides a more comprehensive assessment of the microfacies than is practical by thin-section analysis.

Alaska↗

USGS2007

Chapter B. Physical, Chemical, and Biological Responses of Streams to Increasing Watershed Urbanization in the Piedmont Ecoregion of Georgia and Alabama, 2003

As part of the U.S. Geological Survey National Water-Quality Assessment Program?s effort to assess the physical, chemical, and biological responses of streams to urbanization, 30 wadable streams were sampled near Atlanta, Ga., during 2002?2003. Watersheds were selected to minimize natural factors such as geology, altitude, and climate while representing a range of urban development. A multimetric urban intensity index was calculated using watershed land use, land cover, infrastructure, and socioeconomic variables that are highly correlated with population density. The index was used to select sites along a gradient from low to high urban intensity. Response variables measured include stream hydrology and water temperature, instream habitat, field properties (pH, conductivity, dissolved oxygen, turbidity), nutrients, pesticides, suspended sediment, sulfate, chloride, Escherichia coli (E. coli) concentrations, and characterization of algal, invertebrate and fish communities. In addition, semipermeablemembrane devices (SPMDs)?passive samplers that concentrate hydrophobic organic contaminants such as polycyclicaromatic hydrocarbons (PAHs)?were used to evaluate water-quality conditions during the 4 weeks prior to biological sampling. Changes in physical, chemical, and biological conditions were evaluated using both nonparametric correlation analysis and nonmetric multidimensional scaling (MDS) ordinations and associated comparisons of dataset similarity matrices. Many of the commonly reported effects of watershed urbanization on streams were observed in this study, such as altered hydrology and increases in some chemical constituent levels. Analysis of water-chemistry data showed that specific conductance, chloride, sulfate, and pesticides increased as urbanization increased. Nutrient concentrations were not directly correlated to increases in development, but were inversely correlated to percent forest in the watershed. Analyses of SPMD-derived data showed that bioassays and certain chemical constituents such as pyrene and benzophenanthrene, both PAHs found in coal tar, were strongly correlated with measures of watershed urbanization. Hydrologic variability metrics indicated that as urban development increased, streams became flashier, with characteristic high flows having shorter duration. The hydrologic effects associated with urbanization were greatest during the fall and least apparent during the winter. No correlations were observed between increasing urbanization and stream temperature or changes in stream habitat. Algal, invertebrate, and fish communities exhibited statistically significant changes as watersheds became increasingly urban, with the strongest responses observed in the invertebrate community followed by fishes, then algal diatom communities. Invertebrate communities were the most responsive to increasing urbanization with Ephemeroptera, Plecoptera, and Tricoptera taxa, especially Plecoptera (stoneflies) responding negatively and most strongly to increasing urbanization. Invertebrate communities were influenced more significantly by water quality, although significant responses to altered hydrology also were noted. In terms of the fish community, the percentage of cyprinids present in the stream was the only Index of Biotic Integrity metric that responded negatively to increases in watershed urbanization. Fish community response to urbanization was intermediate relative to algae and invertebrates with respect to significant metric responses as well as the overall community response to increasing urbanization. Measures of hydrologic variability were the most influential environmental variables affecting the algal community. Although sites were originally chosen to represent a gradient of increasing urbanization, a cluster analysis performed on the component metrics of the urban index categorized sites into four distinct groups. Multivariate analysis based on nonmetric MDS and related analyses of data ma

Alabama, Georgia↗

USGS1986

Preliminary map showing the thickness of glacial deposits in Ohio

This map was compiled as part of a U.S. Geological Survey project to portray the character and thickness of glacial deposits east of the Rocky Mountains. It is a preliminary map, compiled at a scale of 1:250,000 from sources of differing type and quality (fig. I, table 1). County drift-thickness maps produced by the Ohio Geological Survey are the most reliable source of data used. These county maps, either published or in manuscript form, were available for 36 of the 72 counties that contain glacial or glacially related deposits more than 50 ft thick. An earlier, reconnaissance drift-thickness map of northwestern Ohio (Ohio Department of Natural Resources, 1960) provided data for parts of 12 additional counties. Published maps of bedrock topography were utilized for 9 counties and for parts of 6 counties. The computation of drift thickness in these counties is less reliable then the drift-thickness maps published by the Ohio Geological Survey because the bedrock topography maps, most of which are at least 20 years old, were compiled from a more limited set of data. In the remaining counties, only well-log data were available. Drift-thickness data in these counties are the least reliable; the determination of thickness trends was commonly guided by the configuration of preglacial drainage channels (as drawn by Stout and others, 1943) and by topography. Throughout the glaciated areas of Ohio, and especially near the glacial margin, a network of drainage channels is buried by glacial drift. Some of these channels arc of a preglacial age while others were formed during interglacial periods; some were cut into the bedrock by rivers— either preglacial rivers or meltwater streams flowing along the glacial margin—while others, such as the lower Cuyahoga River valley, may have been overdeepened by the erosive power of glacial ice. The thickest deposits of drift in the state occur in the lower Cuyahoga River valley near Lake Erie, and above the buried valley in west-central Ohio that has been historically considered a part of the Teays Valley. The thickest drift reliably measured in Ohio to date is 602 ft in a drill hole near Cleveland. In contrast to the extreme variations in drift thickness encountered in the vicinity of buried channels, drift on the upland arcus is generally thinner and the variations in thickness are much less pronounced. Worthy of note, however, are three large areas where the drift sheet is relatively thick. In northwestern Ohio, a large volume of drift was deposited along the flanks of the Erie ice lobe (fig. 2) near the interlobate position with the Saginaw lobe to the northwest; drift thickness there exceeds 200 ft. Thick drift was also deposited in a roughly cast-west band across the Miami lobe. The mechanism that produced this band of thick drift is not obvious, but it may have been influenced in part by bedrock topography. Bedrock control of drift thickness is more clearly indicated to the cast of Columbus, along the eastern flank of the Scioto lobe, where ice slow was resisted by rocks of the Allegheny plateau. The edge of the plateau, or the Allegheny escarpment, is obscured by glacial deposits but its likely position (Fenneman, 1938; Stout and others, 1913; Dove, 1960; and Root and others, 1961) is shown on the map. Southward from the ice margin's reentrant position in southern Richland County, ice flowing eastward from the Scioto lobe encountered the topographically higher plateau, which constrained the ice and caused drift to accumulate in significant thicknesses just to the west of the escarpment.

Ohio↗