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Water-quality assessment of the Central Arizona Basins, Arizona and northern Mexico – Environmental setting and overview of water quality

The Central Arizona Basins study area in central and southern Arizona and northern Mexico is one of 60 study units that are part of the U.S. Geological Survey's National Water-Quality Assessment program. The purpose of this report is to describe the physical, chemical, and environmental characteristics that may affect water quality in the Central Arizona Basins study area and present an overview of water quality. Covering 34,700 square miles, the study area is characterized by generally north to northwestward-trending mountain ranges separated by broad, gently sloping alluvial valleys. Most of the perennial rivers and streams are in the northern part of the study area. Rivers and streams in the south are predominantly intermittent or ephemeral and flow in response to precipitation such as summer thunderstorms. Effluent-dependent streams do provide perennial flow in some reaches. The major aquifers in the study area are in the basin-fill deposits that may be as much as 12,000 feet thick. The 1990 population in the study area was about 3.45 million, and about 61 percent of the total was in Maricopa County (Phoenix and surrounding cities). Extensive population growth over the past decade has resulted in a twofold increase in urban land areas and increased municipal water use; however, agriculture remains the major water use. Seventy-three percent of all water with drawn in the study area during 1990 was used for agricultural purposes. The largest rivers in the study area-the Gila, Salt, and Verde-are perennial near their headwaters but become intermittent downstream because of impoundments and artificial diversions. As a result, the Central Arizona Basins study area is unique compared to less arid basins because the mean surface-water outflow is only 528 cubic feet per second from a total drainage area of 49,650 square miles. Peak flows in the northern part of the study area are the result of snowmelt runoff; whereas, summer thunderstorms account for the peak flows in the southern part. Ground water is the primary water supply in most of Arizona and the only source of drinking water used by communities in the southern half of the study area. Years of overpumping have caused water tables in basin fill to drop below once-perennial streams leaving streambeds dry, water too deep to pump economically, pumping of poorer quality water with depth, and earth fissures resulting from subsidence after dewatering of sediments. Natural processes-such as leaching of trace elements and major ions from geologic formations-and human activities-such as mining, agriculture, and urban development-have major effects on the quality of surface-water and ground-water resources in the Central Arizona Basins study area. Surface-water quality standards in Arizona are based on the designated use of the water such as full or partial body contact, fish consumption, aquatic and wildlife uses, and agriculture. Maintaining the biological integrity (health) of surface waters in Arizona is an important part of ensuring that these waters are suitable for designated uses. Important water-quality issues for surface water that are somewhat unique to Arizona include: (1) streamflows and riparian environments sustained by effluent from municipal wastewater-treatment plants that contains high concentrations of nutrients, potentially toxic trace elements and organic compounds, and fecal bacteria; (2) industrial, mining, agricultural, and municipal sources of contamination from Mexico; and (3) unpredictable high flows from major summer thunder storms causing stream-channel changes; high suspended-sediment concentrations and loads; sewage overflows; and breaching, erosion, and washout of landfills and mining operations. The quality of water in aquifers that are protected for drinking- water use is subject to standards that are in most cases equal to or more stringent than the primary drinking-water regulations of the U.S. Environmental Protection Agency. The general che

Arizona

Water-quality assessment of the Ozark Plateaus study unit, Arkansas, Kansas, Missouri, and Oklahoma- fish communities in streams of the Ozark Plateaus and their relations to selected environmental factors

Fish communities from 22 reaches at 18 stations in the Ozark Plateaus were sampled in 1993, 1994, and 1995. The 18 stations were chosen to represent selected combinations of major environmental factors (geology/physiographic area, land use, and basin size). Additional physical, chemical, and biological factors also were measured for each of the 22 reaches and the influence of these factors upon the fish communities was investigated. Fish community samples collected at the 22 reaches identified differences in these communities that can be attributed to differences in land use and related water-quality and habitat characteristics. Communities from agriculture reaches tended to have more species, increased relative abundance of stonerollers and members of the sucker family, and decreased relative abundance of members of the sunfish and darter families. Several groups of environmental factors (concentrations of nutrients, organic carbon, suspended sediment, and dissolved oxygen; measures related to ionic strength; measures related to riparian vegetation; measures related to substrate; and measures related to stream size) appear to be related to land-use differences and fish community differences. Three multivariate analysis techniques (two ordination techniques and a classification technique) yielded similar results when applied to the fish community data. Fish communities from reaches with more similar land use in their basins and with similar drainage areas generally were grouped closer together in the analysis. Water quality, substrate, stream morphology, and riparian measures appear to be affecting fish communities at these reaches. The relations between land use, stream size, and fish communities have implications for water quality assessments of Ozark streams. Compared to other parts of the United States, many fish species live in the Ozark Plateaus. At least 19 of these species are endemic to the Ozarks area. Many of these species are intolerant of habitat or water chemistry degradation. This characteristic makes fish a useful tool for assessing water-chemistry and other habitat conditions of streams. Several environmental factors can contribute to differences in fish communities. Elevated nutrient concentrations and greater canopy angles can increase periphyton production. Greater canopy angles can raise water temperatures and, if they reflect less woody vegetation along the banks of streams, can be associated with greater streambank erosion. Elevated suspended sediment concentrations and finer and more embedded substrates can reduce benthic macroinvertebrate populations, decrease spawning success of many fish species, and decrease protection of benthic fish from water velocities and predators.

Arkansas, Kansas, Missouri, Oklahoma

Guidelines for quality assurance and quality control of fish taxonomic data collected as part of the National Water-Quality Assessment Program

Fish community structure is characterized by the U.S. Geological Survey's National Water-Quality Assessment (NAWQA) Program as part of a perennial, multidisciplinary approach to evaluating the physical, chemical, and biological conditions of the Nation's water resources. The objective of quality assurance and quality control of fish taxonomic data that are collected as part of the NAWQA Program is to establish uniform guidelines and protocols for the identification, processing, and archiving of fish specimens to ensure that accurate and reliable data are collected. Study unit biologists, collaborating with regional biologists and fish taxonomic specialists, prepare a pre-sampling study plan that includes a preliminary faunal list and identification of an ichthyological curation center for receiving preserved fish specimens. Problematic taxonomic issues and protected taxa also are identified in the study plan, and collecting permits are obtained in advance of sampling activities. Taxonomic specialists are selected to identify fish specimens in the field and to assist in determining what fish specimens should be sacrificed, fixed, and preserved for laboratory identification, independent taxonomic verification, and long-term storage in reference or voucher collections. Quantitative and qualitative sampling of fishes follows standard methods previously established for the NAWQA Program. Common ichthyological techniques are used to process samples in the field and prepare fish specimens to be returned to the laboratory or sent to an institutional repository. Taxonomic identifications are reported by using a standardized list of scientific names that provides nomenclatural consistency and uniformity across study units.

Water-Resources Investigations Report

Environmental setting of the upper Illinois River basin and implications for water quality

The upper Illinois River Basin (UIRB) is the 10,949 square mile drainage area upstream from Ottawa, Illinois, on the Illinois River. The UIRB is one of 13 studies that began in 1996 as part of the U.S. Geological Survey's National Water-Quality Assessment program. A compilation of environmental data from Federal, State, and local agencies provides a description of the environmental setting of the UIRB. Environmental data include natural factors such as bedrock geology, physiography and surficial geology, soils, vegetation, climate, and ecoregions; and human factors such as land use, urbanization trends, and population change. Characterization of the environmental setting is useful for understanding the physical, chemical, and biological characteristics of surface and ground water in the UIRB and the possible implications of that environmental setting for water quality. Some of the possible implications identified include depletion of dissolved oxygen because of high concentrations of organic matter in wastewater, increased flooding because of suburbanization, elevated arsenic concentrations in ground water because of weathering of shale bedrock, and decreasing ground-water levels because of heavy pumping of water from the bedrock aquifers.

Illinois, Indiana, Wisconsin

Selected aquatic biological investigations in the Great Salt Lake basins, 1875-1998, National Water-Quality Assessment Program

This report summarizes previous investigations of aquatic biological communities, habitat, and contaminants in streams and selected large lakes within the Great Salt Lake Basins study unit as part of the U.S. Geological Survey’s National Water-Quality Assessment Program (NAWQA). The Great Salt Lake Basins study unit is one of 59 such units designed to characterize water quality through the examination of chemical, physical, and biological factors in surface and ground waters across the country. The data will be used to aid in the planning, collection, and analysis of biological information for the NAWQA study unit and to aid other researchers concerned with water quality of the study unit. A total of 234 investigations conducted during 1875-1998 are summarized in this report. The studies are grouped into three major subjects: (1) aquatic communities and habitat, (2) contamination of streambed sediments and biological tissues, and (3) lakes. The location and a general description of each study is listed. The majority of the studies focus on fish and macroinvertebrate communities. Studies of algal communities, aquatic habitat, riparian wetlands, and contamination of streambed sediment or biological tissues are less common. Areas close to the major population centers of Salt Lake City, Provo, and Logan, Utah, are generally well studied, but more rural areas and much of the Bear River Basin are lacking in detailed information, except for fish populations.

Idaho, Utah, Wyoming

Limnology of Big Lake, south-central Alaska, 1983-84

The limnological characteristics and trophic state of Big Lake in south-central Alaska were determined from the results of an intensive study during 1983-84. The study was begun in response to concern over the potential for eutrophication of Big Lake, which has experienced substantial residential development and recreational use because of its proximity to Anchorage. The east and west basins of the 1,213 square-hectometer lake were each visited 36 times during the 2-year study to obtain a wide variety of physical, chemical, and biological data. During 1984, an estimate was made of the lake's annual primary production. Big Lake was classified as oligotrophic on the basis of its annual mean values for total phosphorus (9.5 micrograms per liter), total nitrogen (209 micrograms per liter), chlorophyll-a (2.5 micrograms per liter), secchi-disc transparency (6.3 meters), and its mean daily integral primary production of 81.1 milligrams of carbon fixed per square meter. The lake was, however, uncharacteristic of oligotrophic lakes in that a severe dissolved-oxygen deficit developed within the hypolimnion during summer stratification and under winter ice cover. The summer dissolved-oxygen deficit resulted from the combination of strong and persistent thermal stratification, which developed within 1 week of the melting of the lake's ice cover in May, and the failure of the spring circulation to fully reaerate the hypolimnion. The autumn circulation did reaerate the entire water column, but the ensuing 6 months of ice and snow cover prevented atmospheric reaeration of the water column and led to development of the winter dissolved-oxygen deficit. The anoxic conditions that eventually developed near the lake bottom allowed the release of nutrients from the bottom sediments and facilitated ammonification reactions. These processes yielded hypolimnetic concentrations of nitrogen and phosphorus compounds, which were much larger than the oligotrophic concentrations measured within the epilimnion. An analysis of nitrogen-to-phosphorus ratios showed that nitrogen was the nutrient most likely to limit phytoplankton growth during the summer. Although mean chlorophyll-a concentrations were at oligotrophic levels, concentrations did peak at 46.5 micrograms per liter in the east basin. During each year and in both basins, the peak chlorophyll-a concentrations were measured within the hypolimnion because the euphotic zone commonly was deeper than the epilimnion during the summer. The annual integral primary production of Big Lake in 1984 was 29.6 grams of carbon fixed per square meter with about 90 percent of that produced during May through October. During this time period, the lake received 76 percent of its annual input of solar irradiance. Monthly integral primary production, in milligrams of carbon fixed per square meter, ranged from 1.5 in January to 7,050 in July. When compared with the range of annual integral primary production measured in 50 International Biological Program lakes throughout the world, Big Lake had a low value of annual integral primary production. The results of this study lend credence to the concerns about the potential eutrophication of Big Lake. Increases in the supply of oxygen-demanding materials to Big Lake could worsen the hypolimnetic dissolved-oxygen deficit and possibly shift the lake's trophic state toward mesotrophy or eutrophy.

Water Supply Paper

A nitrogen-rich septage-effluent plume in a glacial aquifer, Cape Cod, Massachusetts, February 1990 through December 1992

Physical, chemical, and microbial processes controlled transport of a nitrogen-rich ground-water plume through a glacial aquifer. Lithologic heterogeneity and vertical head gradients influenced plume movement and geometry. Nitrate was the predominant nitrogen form and oxygen was depleted in the ground-water plume. However, denitrification transformed only 2 percent of plume nitrogen because of limited organic-carbon availability. Aerobic respiration, nitrification and cation exchange (unsaturated zone) and ammonium sorption (saturated zone) had larger effects.

Water Supply Paper

Nutrient and trace-element enrichment of Coeur d'Alene Lake, Idaho

The limnological characteristics and geochemistry of lakebed sediments in Coeur d'Alene Lake were assessed during 1991-92 because of the possible interaction of nutrient enrichment with the highly enriched trace-element concentrations stored in the lakebed. The scope included characterization of physical, chemical, and biological variables; quantification of hydrologic, nutrient, and trace-element budgets; development of an empirical nutrient load/lake response model; and characterization of trace elements in surficial and subsurface lakebed sediments.

Water Supply Paper

Influence of estuarine processes on spatiotemporal variation in bioavailable selenium

Dynamic processes (physical, chemical and biological) challenge our ability to quantify and manage the ecological risk of chemical contaminants in estuarine environments. Selenium (Se) bioavailability (defined by bioaccumulation), stable isotopes and molar carbon-tonitrogen ratios in the benthic clam Potamocorbula amurensis, an important food source for predators, were determined monthly for 17 yr in northern San Francisco Bay. Se concentrations in the clams ranged from a low of 2 to a high of 22 μg g -1 over space and time. Little of that variability was stochastic, however. Statistical analyses and preliminary hydrodynamic modeling showed that a constant mid-estuarine input of Se, which was dispersed up- and down-estuary by tidal currents, explained the general spatial patterns in accumulated Se among stations. Regression of Se bioavailability against river inflows suggested that processes driven by inflows were the primary driver of seasonal variability. River inflow also appeared to explain interannual variability but within the range of Se enrichment established at each station by source inputs. Evaluation of risks from Se contamination in estuaries requires the consideration of spatial and temporal variability on multiple scales and of the processes that drive that variability.

Marine Ecology Progress Series

Index for characterizing post-fire soil environments in temperate coniferous forests

Many scientists and managers have an interest in describing the environment following a fire to understand the effects on soil productivity, vegetation growth, and wildlife habitat, but little research has focused on the scientific rationale for classifying the post-fire environment. We developed an empirically-grounded soil post-fire index (PFI) based on available science and ecological thresholds. Using over 50 literature sources, we identified a minimum of five broad categories of post-fire outcomes: (a) unburned, (b) abundant surface organic matter ( > 85% surface organic matter), (c) moderate amount of surface organic matter ( &ge; 40 through 85%), (d) small amounts of surface organic matter ( < 40%), and (e) absence of surface organic matter (no organic matter left). We then subdivided each broad category on the basis of post-fire mineral soil colors providing a more fine-tuned post-fire soil index. We related each PFI category to characteristics such as soil temperature and duration of heating during fire, and physical, chemical, and biological responses. Classifying or describing post-fire soil conditions consistently will improve interpretations of fire effects research and facilitate communication of potential responses or outcomes (e.g., erosion potential) from fires of varying severities.

Forests

The cycling of iron and manganese in the water column of Lake Sammamish, Washington

Processes controlling the distribution and mobility of Fe and Mn in Lake Sammamish, Washington, a seasonally anoxic lake, are deduced from a year‐long monthly study of physical, chemical, and biological parameters in the lake. Inventories of dissolved Mn and Fe in the bottom waters increase as the redox potential lowers with dissolved Mn inventories during stagnation being much larger than inventories of dissolved Fe. The shapes of the dissolved metal profiles indicate that dissolved Fe is supplied to the hypolimnion during stratification by diffusion of Fe(II) from the sediments into the overlying anoxic water as well as reduction of Fe oxide particles settling through the anoxic water column, while the dominant source of dissolved Mn to the anoxic bottom waters during most of the stratification period appears to be reduction of settling Mn‐oxide particles. Inventories of particulate Fe in the hypolimnion during the latter stages of stratification are significantly larger than inventories of particulate Mn. Peaks of particulate Fe and Mn occur in the water column from July through November and particulate Mn peaks always occur at shallower depths than peaks of particulate Fe. Flux calculations suggest that there is a sufficient supply of both oxygen and reduced metal to the particulate zones for metal‐oxide precipitation to occur. Thermodynamic calculations suggest that during the sulfidic phase of stagnation dissolved Fe concentrations in the very bottom waters may be controlled by FeS precipitation.

Washington

Impacts of convective storms on runoff, erosion, and carbon export in a continuous permafrost landscape

Permafrost holds more than twice the amount of carbon currently in the atmosphere, but this large carbon reservoir is vulnerable to thaw and erosion under a rapidly changing Arctic climate. Convective storms are becoming increasingly common during Arctic summers and can amplify runoff and erosion. These extreme events, in concert with active layer deepening, may accelerate carbon loss from the Arctic landscape. However, we lack measurements of carbon fluxes during these events. Rivers are sensitive to physical, chemical, and hydrological perturbations, and thus are excellent systems for studying landscape responses to thunderstorms. We present observations from the Canning River, Alaska, which drains the northern Brooks Range and flows across a continuous permafrost landscape to the Beaufort Sea. During summer 2022 and 2023 field campaigns, we opportunistically monitored river discharge, sediment, and organic carbon fluxes during several thunderstorms. During one notable storm, river discharge nearly doubled from ~130 m3/s to ~240 m3/s, suspended sediment flux increased 70-fold, and the particulate organic carbon (POC) flux increased 90-fold relative to non-storm conditions. Taken together, the river exported ~16 metric tons of POC over one hour of this sustained event, not including the additional flux of woody debris. Furthermore, the dissolved organic carbon (DOC) flux nearly doubled. Although these thunderstorm-driven fluxes are short-lived (hours to days), they play an outsized role in exporting organic carbon from Arctic rivers. Understanding how these extreme events impact river water, sediment, and carbon dynamics will help predict how Arctic climate change will modify the global carbon cycle.

Alaska

Geochemistry of the processes that attenuate acid mine drainage in wetlands

Because conventional treatment of acid-mine drainage (AMD) involves installation and maintenance of water treatment plants, regulators and mine operators have sought lower cost and lower maintenance technologies. One ecological engineering technology that has received increasing research attention is the use of natural and constructed wetlands for remediation of some of the water-quality problems associated with AMD. As surface water flows through a wetland, several processes can occur to decrease the elevated concentrations of sulfate, trace metals, arsenic, and hydrogen ions that characterize AMD. These processes range from precipitation of mineral phases to the active uptake of solutes by vegetation. The relative importance of these processes between different wetlands depends on the hydrologic and geochemical characteristics of the wetlands. This paper describes the geochemistry of the processes that contribute to AMD attenuation in wetlands and presents some of the case studies that have identified these processes. The attenuation of AMD in wetlands has been studied in natural and in man- made (constructed) wetlands. In this paper, case studies of both are presented. A discussion of some of the general characteristics of wetlands is followed by more detailed discussions of the processes and geochemistry that contribute to the treatment of AMD in wetlands, relevant case studies, and a brief discussion of constructed wetland design. The physical, chemical, and hydrologic characteristics of a wetland that affect its potential for supporting specific types of reactions are also emphasized.

Book chapter

How can present and future satellite missions support scientific studies that address ocean acidification?

Space-based observations offer unique capabilities for studying spatial and temporal dynamics of the upper ocean inorganic carbon cycle and, in turn, supporting research tied to ocean acidification (OA). Satellite sensors measuring sea surface temperature, color, salinity, wind, waves, currents, and sea level enable a fuller understanding of a range of physical, chemical, and biological phenomena that drive regional OA dynamics as well as the potentially varied impacts of carbon cycle change on a broad range of ecosystems. Here, we update and expand on previous work that addresses the benefits of space-based assets for OA and carbonate system studies. Carbonate chemistry and the key processes controlling surface ocean OA variability are reviewed. Synthesis of present satellite data streams and their utility in this arena are discussed, as are opportunities on the horizon for using new satellite sensors with increased spectral, temporal, and/or spatial resolution. We outline applications that include the ability to track the biochemically dynamic nature of water masses, to map coral reefs at higher resolution, to discern functional phytoplankton groups and their relationships to acid perturbations, and to track processes that contribute to acid variation near the land-ocean interface.

Oceanography

Environmental factors that influence cyanobacteria and geosmin occurrence in reservoirs

Phytoplankton are small to microscopic, free-floating algae that inhabit the open water of freshwater, estuarine, and saltwater systems. In freshwater lake and reservoirs systems, which are the focus of this chapter, phytoplankton communities commonly consist of assemblages of the major taxonomic groups, including green algae, diatoms, dinoflagellates, and cyanobacteria. Cyanobacteria are a diverse group of single-celled organisms that can exist in a wide range of environments, not just open water, because of their adaptability [1-3]. It is the adaptability of cyanobacteria that enables this group to dominate the phytoplankton community and even form nuisance or harmful blooms under certain environmental conditions [3-6]. In fact, cyanobacteria are predicted to adapt favorably to future climate change in freshwater systems compared to other phytoplankton groups because of their tolerance to rising temperatures, enhanced vertical thermal stratification of aquatic ecosystems, and alterations in seasonal and interannual weather patterns [7, 8]. Understanding those environmental conditions that favor cyanobacterial dominance and bloom formation has been the focus of research throughout the world because of the concomitant production and release of nuisance and toxic cyanobacterial-derived compounds [4-6, 7-10]. However, the complex interaction among the physical, chemical, and biological processes within lakes, reservoirs, and large rivers often makes it difficult to identify primary environmental factors that cause the production and release of these cyanobacterial by-products.

South Carolina

A preliminary report on the growth of the rock bass, Ambloplites rupestris (Rafinesque), in two lakes of northern Wisconsin

For several years the Wisconsin Geological and Natural History Survey has been making a limnological study of lakes in the northern part of the State. Because of the fact that so much has been learned of the physical, chemical and biological conditions in these lakes, the region seems particularly favorable for a study of the growth rates of fishes in relation to environmental factors.

Transactions of the Wisconsin Academy of Sciences,

Nickel Hazards to Fish, Wildlife and Invertebrates: A Synoptic Review

This account is a selective review and synthesis of the technical literature on nickel and nickel salts in the environment and their effects on terrestrial plants and invertebrates, aquatic plants and animals, avian and mammalian wildlife, and other natural resources, The subtopics include nickel sources and uses; physical, chemical, and metabolic properties of nickel; nickel concentrations in field collections of abiotic materials and living organisms; nickel deficiency effects; lethal and sublethal effects, including effects on survival, growth, reproduction, metabolism, mutagenicity, teratogenicity, and carcinogenicity; currently proposed nickel criteria for the protection of human health and sensitive natural resources; and recommendations for additional research.

Contaminant Hazard Reviews

Contaminant Hazard Reviews. [Reports No. 1-28 on CD-ROM.]

This compact disc (CD) contains the first 28 reports in the Contaminant Hazard Reviews (CHR) that were published originally between 1985 and 1994 in the U.S. Department of the Interior Biological Report series. The CD was produced because printed supplies of these reviews--a total of 84,000--became exhausted and demand remained high. Each review was prepared at the request of environmental specialists of the U.S. Fish and Wildlife Service and each contained specific information on mirex, cadmium, carbofuran, toxaphene, selenium, chromium, polychlorinated biphenyls, dioxins, diazinon, mercury, polycyclic aromatic hydrocarbons, arsenic, chlorpyrifos, lead, tin, index issue, pentachlorophenol, atrazine, molybdenum, boron, chlordane, paraquat, cyanide, fenvalerate, diflubenzuron, zinc, famphur, or acrolein. Each report reviewed and synthesized the technical literature on a single contaminant and its effects on terrestrial plants and invertebrates, aquatic plants and animals, avian and mammalian wildlife, and other natural resources. The subtopics include contaminant sources and uses; physical, chemical, and metabolic properties; concentrations in field collections of abiotic materials and living organisms; deficiency effects, where appropriate; lethal and sublethal effects, including effects on survival, growth, reproduction, metabolism, mutagenicity, teratogenicity, and carcinogenicity; proposed criteria for the protection of human health and sensitive natural resources; and recommendations for additional research.

Book