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At least 433 records · Page 24Linked to original sources
USGS2011

Assessing the impacts of river regulation on native bull trout ( Salvelinus confluentus ) and westslope cutthroat trout ( Oncorhynchus clarkii lewisi ) habitats in the upper Flathead River, Montana, USA

Hungry Horse Dam on the South Fork Flathead River, Montana, USA, has modified the natural flow regimen for power generation, flood risk management and flow augmentation for anadromous fish recovery in the Columbia River. Concern over the detrimental effects of dam operations on native resident fishes prompted research to quantify the impacts of alternative flow management strategies on threatened bull trout (Salvelinus confluentus) and westslope cutthroat trout (Oncorhynchus clarkii lewisi) habitats. Seasonal and life‐stage specific habitat suitability criteria were combined with a two‐dimensional hydrodynamic habitat model to assess discharge effects on usable habitats. Telemetry data used to construct seasonal habitat suitability curves revealed that subadult (fish that emigrated from natal streams to the river system) bull trout move to shallow, low‐velocity shoreline areas at night, which are most sensitive to flow fluctuations. Habitat time series analyses comparing the natural flow regimen (predam, 1929–1952) with five postdam flow management strategies (1953–2008) show that the natural flow conditions optimize the critical bull trout habitats and that the current strategy best resembles the natural flow conditions of all postdam periods. Late summer flow augmentation for anadromous fish recovery, however, produces higher discharges than predam conditions, which reduces the availability of usable habitat during this critical growing season. Our results suggest that past flow management policies that created sporadic streamflow fluctuations were likely detrimental to resident salmonids and that natural flow management strategies will likely improve the chances of protecting key ecosystem processes and help to maintain and restore threatened bull trout and westslope cutthroat trout populations in the upper Columbia River Basin.

Montana↗
USGS2014

The influence of logjams on largemouth bass ( Micropterus salmoides ) concentrations on the lower Roanoke River, a large sand-bed river

This study examines the relation between logjams and largemouth bass (Micropterus salmoides) on the alluvial sand-bed lower Roanoke River. Disparate data sets from previous bank erosion, fisheries, and large wood studies were used to compare the distribution of largemouth bass with logjam frequency. Logjams are related to the frequency of bank mass wasting increasing from near an upstream dam to the middle reach of the study segment and then decreasing as the river approaches sea level. The highest concentration of largemouth bass and logjams was in the middle reach (110 fish per hour and 21 jams per km). Another measure of largemouth bass distribution, fish biomass density (g h1 ), had a similar trend with logjams and was a better predictor of fish distribution versus logjams (R2= 0.6 and 0.8 and p = 0.08 and 0.02 for fish per hour and g h1 versus logjam, respectively). We theorize that the preference for adult bass to congregate near logjams indicates the use of the jams as feeding areas. The results of a principal component analysis indicate that fish biomass concentration is much more related to logjam frequency than channel geometry (width, depth, and bank height), bed grain size, bank erosion, or turbidity. The results of this research support recent studies on in-channel wood and fisheries: Logjams appear to be important for maintaining, or increasing, both largemouth bass numbers and total biomass of fish in large eastern North American rivers. Persistent logjams, important as habitat, exist where relatively undisturbed river reaches allow for bank erosion inputs of wood and available anchoring locations. Published 2014. This article is a U.S. Government work and is in the public domain in the USA.

North Carolina↗
USGS2024

Evaluating the context dependency of large river nursery habitats for fishes in the lower Red River catchment

Both fine- and coarse-scale physicochemical conditions affect the quantity and quality of nursery habitats within riverine ecosystems. Nursery habitats in large, braided, and sandbed streams such as the lower Red River of Oklahoma, Texas, and Arkansas are not well described and likely vary among species. Identification of nursery habitats is important for developing proper conservation and management actions. We used an occupancy model framework to determine how hierarchical habitat factors related to the occupancy of 38 juvenile fish species. Our findings indicate that large river nursery habitats can generally be defined by reaches with off-channel slackwater habitat, having deep pools but shallow thalweg depths, typically located further away from dams, and with low percentages of limestone lithology. Species within the same genera often exhibited variable relationships with river slope, amount of large woody debris, channel shape, discharge, and position of reaches within the stream network. Our results indicate important species-specific relationships that define nursery habitats, indicating an important context dependency of nursery habitats even within fishes that are taxonomically similar. If the goal is to improve recruitment by native fishes, then consideration of the important species-specific differences would be beneficial if improvements are made to nursery habitats. Moreover, careful consideration of the effects of dam operations will help maintain proper connectivity to off-channel habitats important in downriver portions of the river network.

Arkansas, Louisiana, Oklahoma, Texas↗
USGS2005

Effects of stream flow intermittency on riparian vegetation of a semiarid region river (San Pedro River, Arizona)

The San Pedro River in the southwestern United States retains a natural flood regime and has several reaches with perennial stream flow and shallow ground water. However, much of the river flows intermittently. Urbanization-linked declines in regional ground-water levels have raised concerns over the future status of the riverine ecosystem in some parts of the river, while restoration-linked decreases in agricultural ground-water pumping are expected to increase stream flows in other parts. This study describes the response of the streamside herbaceous vegetation to changes in stream flow permanence. During the early summer dry season, streamside herbaceous cover and species richness declined continuously across spatial gradients of flow permanence, and composition shifted from hydric to mesic species at sites with more intermittent flow. Hydrologic threshold values were evident for one plant functional group: Schoenoplectus acutus, Juncus torreyi, and other hydric riparian plants declined sharply in cover with loss of perennial stream flow. In contrast, cover of mesic riparian perennials (including Cynodon dactylon, an introduced species) increased at sites with intermittent flow. Patterns of hydric and mesic riparian annuals varied by season: in the early summer dry season their cover declined continuously as flow became more intermittent, while in the late summer wet season their cover increased as the flow became more intermittent. Periodic drought at the intermittent sites may increase opportunities for establishment of these annuals during the monsoonal flood season. During the late summer flood season, stream flow was present at most sites, and fewer vegetation traits were correlated with flow permanence; cover and richness were correlated with other environmental factors including site elevation and substrate nitrate level and particle size. Although perennial-flow and intermittent-flow sites support different streamside plant communities, all of the plant functional groups are abundant at perennial-flow sites when viewing the ecosystem at broader spatial and temporal scales: mesic riparian perennials are common in the floodplain zone adjacent to the river channel and late-summer hydric and mesic annuals are periodically abundant after large floods. Copyright ?? 2005 John Wiley & Sons, Ltd.

River Research and Applications↗
USGS2020

Riverbank stability assessment of lower Osage River during hydro-peak flow events: The lower Osage River case (Missouri, USA)

The fluctuation of water level downstream from dams due to hydropower flow releases can negatively affect riverbank stability. This research aims to investigate riverbank instability resulting from the outflow variation of hydropower plants, using Bagnell Dam and the lower Osage River (Missouri, USA) as the basis of analysis. The effects of the water releases from the Bagnell Dam were investigated by computing a series of safety factors in relation to outflow events for 78 cross sections along the 130-km stretch of the lower Osage River using the BSTEM algorithm integrated into the HEC-RAS model package. The results showed that the rate of change in the flow magnitude at each cross section impacts the calculated safety factor. The flow release fluctuations will change the value of the safety factor along the river over time, as the safety factor value closely follows the variation in the flow rate. Also, the results show that the cross sections closer to Bagnell Dam are subjected to be more unstable than those farther downstream of Osage River.

Missouri↗
USGS2026

Integrating climate data and river modeling to reveal Chinook salmon habitat conditions in subarctic river basins

Climatic extremes can impact the productivity of aquatic species, affecting ecosystems and fishery-dependent communities. Advances in climate products, such as gridded datasets and downscaled projections, may be useful for quantifying freshwater habitat conditions and predicting climate change effects on fish. However, limited guidance exists for selecting climate products to develop indicators of freshwater habitat conditions that influence fish population dynamics. Here, we develop an approach for identifying streamflow and stream temperature models to address this need. We evaluated skill in predicted versus observed streamflow and stream temperature, with predictions depending on different models and gridded climate data as inputs. The best performing models were used in a case study exploring habitat conditions influencing Chinook salmon in the Yukon and Kuskokwim River basins, two remote high-latitude watersheds with few in situ habitat observations and recent salmon declines. Three modeled streamflow datasets had variable performance (median Nash–Sutcliffe efficiencies from 0.39 to 0.70). Three gridded temperature products differed in their ability to explain variation in weekly stream temperatures (median r 2 from 0.42 to 0.76). We selected a single gridded air temperature dataset to compare two novel predictive stream temperature models, both of which had good accuracy (root mean squared error [RMSE] of 1.19 and 0.95°C). Stream temperature indicators calculated from modeled daily data, maximum temperatures during adult migration and cumulative temperatures during juvenile rearing, had high spatial correlation across tributaries within the Yukon and Kuskokwim River basins and showed significant warming over the past 40 years. Streamflow indicators calculated from modeled daily data, maximum flow during spawning and median flow during rearing, had few trends and were largely uncorrelated within the Yukon River basin and moderately correlated within the Kuskokwim River basin. Overall, we found that generic measures of model performance varied considerably, and it was important to consider the models best suited to our case study. For both streamflow and stream temperature, multiple high-performing models allowed estimation of ecologically relevant conditions affecting Chinook salmon. The approach we used to estimate local-scale habitat conditions has value to identify synchronous conditions that may influence multiple salmon populations under a changing subarctic climate.

Alaska↗
USGS2020

River network and reach‐scale controls on habitat for lamprey larvae in the Umpqua River Basin, Oregon

This study developed a spatially explicit framework to support the conservation of Western Brook Lamprey Lampetra richardsoni and Pacific Lamprey Entosphenus tridentatus in the Umpqua River basin, Oregon. This framework identified locations within the river network likely to support “potential burrowing habitat” for lamprey larvae based on geomorphic conditions and evaluated the overlap of potential burrowing habitat with water temperatures suitable for the nonnative, piscivorous Smallmouth Bass Micropterus dolomieu . The study also documented reach‐scale factors that create heterogeneity in potential burrowing habitat to guide on‐the‐ground habitat restoration. Based on criteria for mean annual suspended sediment loads and channel slope, 18% of the Umpqua River network was classified as potential burrowing habitat. Existing mean August water temperatures of ≥20°C were suitable for Smallmouth Bass for 32% of the potential burrowing habitat. This percentage increased to 41% of the potential burrowing habitat using projected mean August water temperatures for year 2040, suggesting that water temperatures in the future will facilitate upstream expansion of Smallmouth Bass into the potential burrowing habitat. At finer spatial scales, potential burrowing habitat was influenced by channel features, such as large wood, pools, and local channel slope and width. These results provide an initial template for identifying locations in river networks likely to have potential burrowing habitat, considering the overlap between threats and lamprey habitats, and planning conservation actions to support native lampreys.

Oregon↗
USGS2012

Toxicity of copper to early-life stage Kootenai River white sturgeon, Columbia River white sturgeon, and rainbow trout

White sturgeon ( Acipenser transmontanus ) populations throughout western North America are in decline, likely as a result of overharvest, operation of dams, and agricultural and mineral extraction activities in their watersheds. Recruitment failure may reflect the loss of early-life stage fish in spawning areas of the upper Columbia River, which are contaminated with metals from effluents associated with mineral-extraction activities. Early-life stage white sturgeon ( A. transmontanus ) from the Columbia River and Kootenai River populations were exposed to copper during 96-h flow-through toxicity tests to determine their sensitivity to the metal. Similar tests were conducted with rainbow trout (RBT [ Oncorhynchus mykiss ]) to assess the comparative sensitivity of this species as a surrogate for white sturgeon. Exposures were conducted with a water quality pH 8.1-8.3, hardness 81-119 mg/L as CaCO 2 , and dissolved organic carbon 0.2-0.4 mg/L. At approximately 30 days posthatch (dph), sturgeon were highly sensitive to copper with median lethal concentration (LC 50 ) values ranging from 4.1 to 6.8 μg/L compared with 36.5 μg/L for 30 dph RBT. White sturgeon at 123-167 dph were less sensitive to copper with LC 50 values ranging from 103.7 to 268.9 μg/L. RBT trout, however, remained more sensitive to copper at 160 dph with an LC 50 value of 30.9 μg/L. The results indicate that high sensitivity to copper in early-life stage white sturgeon may be a factor in recruitment failure occurring in the upper Columbia and Kootenai rivers. When site-specific water-quality criteria were estimated using the biotic ligand model (BLM), derived values were not protective of early-life stage fish, nor were estimates derived by water-hardness adjustment.

Archives of Environmental Contamination and Toxico↗
USGS2015

Density of river otters (Lontra canadensis) in relation to energy development in the Green River Basin, Wyoming

Exploration and extraction of oil and natural gas have increased in recent years and are expected to expand in the future. Reduction in water quality from energy extraction may negatively affect water supply for agriculture and urban use within catchments as well as down river. We used non-invasive genetic techniques and capture–recapture modeling to estimate the abundance and density of North American river otters ( Lontra canadensis ), a sentinel species of aquatic ecosystems, in Southwestern Wyoming. While densities in two of three river reaches were similar to those reported in other freshwater systems in the western US (1.45–2.39 km per otter), otters appeared to avoid areas near energy development. We found no strong difference in habitat variables, such as overstory cover, at the site or reach level. Also, fish abundance was similar among the three river reaches. Otter activity in our study area could have been affected by elevated levels of disturbance surrounding the industrial gas fields, and by potential surface water contamination as indicated by patterns in water conductivity. Continued monitoring of surface water quality in Southwestern Wyoming with the aid of continuously recording devices and sentinel species is warranted.

Wyoming↗
USGS2003

Modeling precipitation and sorption of elements during mixing of river water and porewater in the Coeur d'Alene River basin

Reddish brown flocs form along the edge of the Coeur d'Alene River when porewater drains into river water during the annual lowering of water level in the basin. The precipitates are efficient scavengers of dissolved elements and have characteristics that may make metals associated with them bioavailable. This work characterizes the geochemistry of the porewater and models the formation and composition of the flocs. Porewater is slightly acidic, has suboxic to anoxic characteristics, tends to have higher alkalinity, and contains elevated concentrations of many constituents relative to river water. Laboratory mixing experiments involving porewater and river water were done to produce the precipitates. Thermodynamic predictions using PHREEQC indicate that predicted amounts of ferrihydrite and gibbsite agree with removal of Fe and Al. Predictions of element removal by adsorption onto ferrihydrite are consistent with observed removal using a combination of surface complexation constants for the generalized two-layer model (As and Se), alternative surface constants derived from experiments at high sorbate-to-sorbent ratios (Cd, Co, Cu, Ni, Pb, and Zn), and adjusted surface constants to fit experimental data (Cr, Mo, and Sb). This new set of surface complexation constants needs further testing in other contaminated systems.

Idaho↗
USGS2023

Moving Aircraft River Velocimetry (MARV): Framework and proof-of-concept on the Tanana River

Information on velocity fields in rivers is critical for designing infrastructure, modeling contaminant transport, and assessing habitat. Although non-contact approaches to measuring flow velocity are well established, these methods assume a stationary imaging platform. This study eliminates this constraint by introducing a framework for moving aircraft river velocimetry (MARV). The workflow takes as input images acquired from an airplane and involves orthorectification, frame overlap analysis, image enhancement, particle image velocimetry (PIV), and aggregation of the resulting velocity vectors onto a prediction grid. We also use new metrics to quantify the agreement between image-derived and field-measured velocity vectors in terms of both orientation and magnitude. The potential of MARV was evaluated using data from two Alaskan rivers: a large, highly turbid channel and its smaller, clearer tributary. Sediment boil vortices on the mainstem provided natural features trackable via PIV and estimated velocities corresponded closely with field measurements ( R 2 up to 0.911). We compared an exhaustive approach that evaluates overlap for all frame combinations to a simpler rolling window implementation and found that the more efficient algorithm did not compromise accuracy. Sensitivity analysis suggested that the method was robust to window parameterization. Comparing PIV output from different flying heights and imaging systems indicated that larger pixels led to higher accuracy and that a more advanced dual-camera system provided superior performance. Results from the tributary were less encouraging, presumably due to a lack of trackable features in visible images. Testing across a range of rivers is needed to assess the generality of MARV.

Water Resources Research↗
USGS2006

Detection of infectious haematopoietic necrosis virus in river water and demonstration of waterborne transmission

In a study of the possible role of waterborne infectious haematopoietic necrosis virus in transmission of the disease among spawning sockeye salmon, Oncorhynchus nerka (Walbaum), both infection rates and virus titres were higher in fish held at high density in a side channel than in fish in the adjacent river. Virus was never isolated from river water, but was found in water from the side channel at levels ranging from 32.5 to 1600 plaque-forming units (p.f.u.)/ml. Uninfected yearling sockeye salmon held in a box in the side channel developed localized gill infections with IHN virus. The disease did not progress to the viscera until a threshold titre of about 10 5 p.f.u./g was reached in the gill. The effectiveness of the gill as a barrier limiting development of systemic infections means that waterborne IHN virus probably does not greatly increase the infection rate in a sockeye salmon population during spawning.

Journal of Fish Diseases↗
USGS2020

Pallid sturgeon seasonal habitat selection in a large free-flowing river, the lower Mississippi River

Pallid sturgeon Scaphirhynchus albus (Forbes & Richardson, 1905, Bulletin of the Illinois State Laboratory of Natural History, 1905, 7, 37) are an endangered riverine sturgeon native to the Mississippi and Missouri rivers, and declining numbers have been attributed to multiple stressors, including habitat loss and alteration. The lower Mississippi River provides a useful context to assess pallid sturgeon habitat selection because, although altered for flood control and navigation, it provides a free-flowing system with a diversity of habitats and a minimally altered hydrograph. A discrete choice model of data collected year-round from two reaches for 3–5 years revealed changes in habitat selection across water temperatures and river stages representative of seasonal variation in habitat for 116 telemetry-tagged pallid sturgeon. Natural bank, island tip, and secondary channel were positively selected and main channel, although frequently used, was avoided. The degree of selection varied among river stages, water temperatures, and reaches. Habitat selection appears to be strongly influenced by preference for locations with moderate depth (median 11.7 m; lower and upper quartiles 8.1 m and 16.3 m) and moderate current velocity (median 0.9 m/s; lower and upper quartiles 0.7 m/s and 1.2 m/s).

Alabama, Arkansas, Louisiana, Mississippi↗
USGS2021

Arc versus river: The geology of the Columbia River Gorge

The Columbia River Gorge is the Columbia River’s long-held yet evolving passage through the volcanic arc of the Cascade Range. The globally unique setting of a continental-scale river bisecting an active volcanic arc at the leading edge of a major plate boundary creates a remarkable setting where dynamic volcanic and tectonic processes interact with diverse and energetic fluvial processes. This three-day field trip explores several elements of the gorge and its remarkable geologic history—cast here as a contest between regional tectonic and volcanic processes building and displacing landscapes, and the relentless power of the Columbia River striving to maintain a smooth passage to the sea.

Oregon, Washington↗
USGS2011

Dating of Pliocene Colorado River sediments: implications for cosmogenic burial dating and the evolution of the lower Colorado River

We applied cosmogenic 26 Al/ 10 Be burial dating to sedimentary deposits of the ancestral Colorado River. We compared cosmogenic burial ages of sediments to the age of an independently well-dated overlying basalt flow at one site, and also applied cosmogenic burial dating to sediments with less precise independent age constraints. All dated gravels yielded old ages that suggest several episodes of sediment burial over the past ∼5.3 m.y. Comparison of burial ages to the overlying 4.4 Ma basalt yielded good agreement and suggests that under the most favorable conditions, cosmogenic burial dating can extend back 4–5 m.y. In contrast, results from other sites with more broadly independent age constraints highlight the complexities inherent in burial dating; these complexities arise from unknown and complicated burial histories, insufficient shielding, postburial production of cosmogenic isotopes by muons, and unknown initial 26 Al/ 10 Be ratios. Nevertheless, and in spite of the large range of burial ages and large uncertainties, we identify samples that provide reasonable burial age constraints on the depositional history of sediment along the lower ancestral Colorado River. These samples suggest possible sediment deposition and burial at ca. 5.3, 4.7, and 3.6 Ma. Our calculated basinwide erosion rate for sediment transported by the modern Colorado River (∼187 mm k.y. −1 ) is higher than the modern erosion rates inferred from the historic sediment load (80–100 mm k.y. −1 ). In contrast, basinwide paleo-erosion rates calculated from Pliocene sediments are all under 40 mm k.y. −1 The comparatively lower denudation rates calculated for the Pliocene sediment samples are surprising given that the sampled time intervals include significant Pliocene aggradation and may include much incision of the Grand Canyon and its tributaries. This conflict may arise from extensive storage of sediment along the route of the Colorado River, slower paleobedrock erosion, or the inclusion of sediments that were derived preferentially from higher elevations in the watershed.

Geological Society of America Bulletin↗
USGS2012

Community-level response of fishes and aquatic macroinvertebrates to stream restoration in a third-order tributary of the Potomac River, USA

Natural stream channel design principles and riparian restoration practices were applied during spring 2010 to an agriculturally impaired reach of the Cacapon River, a tributary of the Potomac River which flows into the Chesapeake Bay. Aquatic macroinvertebrates and fishes were sampled from the restoration reach, two degraded control, and two natural reference reaches prior to, concurrently with, and following restoration (2009 through 2010). Collector filterers and scrapers replaced collector gatherers as the dominant macroinvertebrate functional feeding groups in the restoration reach. Before restoration, based on indices of biotic integrity (IBI), the restoration reach fish and macroinvertebrate communities closely resembled those sampled from the control reaches, and after restoration more closely resembled those from the reference reaches. Although the macroinvertebrate community responded more favorably than the fish community, both communities recovered quickly from the temporary impairment caused by the disturbance of restoration procedures and suggest rapid improvement in local ecological conditions.

West Virginia↗
USGS2002

Genetic structure of Columbia River redband trout populations in the Kootenai River drainage, Montana, revealed by microsatellite and allozyme loci

We describe the genetic divergence among 10 populations of redband trout Oncorhynchus mykiss gairdneri from the upper Columbia River drainage. Resident redband trout from two watersheds in the Kootenai River drainage and hatchery stocks of migratory Kamloops redband trout from Kootenay Lake, British Columbia, were analyzed using allele frequency data from microsatellite and allozyme loci. The Kamloops populations have significantly different allele frequencies from those of the Kootenai River drainage. Of the total genetic variation detected in the resident redband trout, 40.7% (microsatellites) and 15.5% (allozymes) were due to differences between populations from the two Kootenai River watersheds. The divergence among populations within each watershed, however, was less than 3.5% with both techniques. Our data indicate that watershed-specific broodstocks of redband trout are needed by fisheries managers for reintroduction or the supplementation of populations at risk of extinction.

Idaho, Montana↗
USGS2011

The ichthyofauna of drifting macrophyte mats in the Ivinhema River, upper Paraná River basin, Brazil

We describe the fish assemblages associated with drifting macrophyte mats and consider their possible role as dispersal vectors in the Ivinhema River, a major tributary of the upper Paraná River, Brazil. Fish associated with drifting mats were sampled in the main river channel during January and March 2005, when the wind and/or the increased water level were sufficient to transport macrophyte stands. Fish in the drifting mats were sampled with a floating sieve (4 m long x 2 m wide x 0.6 m high, and 2 mm mesh size). In the laboratory, larvae, juvenile, and adult fish were counted and identified to the lowest possible taxonomic level. In four drifting macrophyte mats we captured 218 individuals belonging to at least 28 species, 17 families, and 6 orders. Aphyocharax dentatus , Serrasalmus spp., and Trachelyopterus galeatus were the most abundant taxa associated with the mats, but species richness ranged from 6 to 24 species per mat. In addition, 85% of the total number of individuals caught was larvae and juveniles. Although preliminary and based on limited samples, this study of drifting macrophyte mats was the first one in the last unregulated stretch of the Paraná River remaining inside Brazilian territory, and alerts us to the potential role of macrophytes mats as dispersers of fish species in the region.

Neotropical Ichthyology↗