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USGS2009

Olympic Fisher Reintroduction Project- 2009 Progress Report

The 2009 progress report is a summary of the reintroduction, monitoring, and research efforts undertaken during the first two years of the Olympic fisher reintroduction project. Jeffrey C. Lewis of Washington Department of Fish and Wildlife, Patti J. Happe of Olympic National Park, and Kurt J. Jenkins of U. S. Geological Survey are the principal investigators of the monitoring and research program associated with the reintroduction. David J. Manson of Olympic National Park is the lead biological

Washington↗
USGS1980

Index of streamflow and water quality records to September 30, 1978, Southwest Alaska

This report, which is one of a series of reports for Alaska, lists stations in southwest Alaska (fig. 1) at which streamflow and water-quality data have been collected by the U.S. Geological Survey. Most of the data referred to in this report have been published in reports of the Geological Survey. Water-quality data which were not included in those reports have been placed in the Survey's national computer storage system and are available through data-retrieval programs. Some of the older streamflow data have not been entered into the computer system. Geological Survey Water-Supply Paper (WSP) 1372 contains a summary of previously published records of monthly and annual discharges through September 1945, as well as records of daily and monthly discharges for the water years 1946-50 that had not yet been published. Water-Supply Paper 1372 also contains other stream chemical quality records collected between September 1948 and September 1950 and also some earlier records for the Yukon River at Anvik. Since 1950 data have been published in water-supply papers and a series of annual reports... Data have been published in the annual series of reports, "Water Resources Data for Alaska," since 1961 for streamflow records and 1964 for water-quality records. This index lists: continuous-record streamgaging stations, crest-stage gage and low-flow partial-record stations; daily chemical, sediment, and temperature stations; and stations where some chemical, sediment, and biological data have been collected on an intermittent basis.

Alaska↗
USGS2001

Geologic Map of Part of the Uinkaret Volcanic Field, Mohave County, Northwestern Arizona

The geologic map of part of the Uinkaret Volcanic Field is one product of a cooperative project between the U.S. Geological Survey, the National Park Service, and the Bureau of Land Management to provide geologic information about this part of the Grand Canyon-Parashant Canyon National Monument of Arizona. The Uinkaret Volcanic Field is a unique part of western Grand Canyon where volcanic rocks have preserved the geomorphic development of the landscape. Most of the Grand Canyon, and parts of adjacent plateaus have already been mapped. This map completes one of the remaining areas where uniform quality geologic mapping was needed. A few dozen volcanoes and lava flows within the Grand Canyon are not included in the map area, but their geologic significance to Grand Canyon development is documented by Hamblin (1994) and mapped by Billingsley and Huntoon (1983) and Wenrich and others (1997). The geologic information in this report may be useful to resource managers of the Bureau of Land Management for range management, biological, archaeological, and flood control programs. The map area lies within the Shivwits, Uinkaret, and Kanab Plateaus, which are subplateaus of the Colorado Plateaus physiographic province (Billingsley and others, 1997), and is part of the Arizona Strip north of the Colorado River. The nearest settlement is Colorado City, Arizona, about 58 km (36 mi) north of the map area (fig. 1). Elevations range from about 2,447 m (8,029 ft) at Mount Trumbull, in the northwest quarter of the map area, to about 732 m (2,400 ft) in Cove Canyon, in the southeast quarter of the map area. Vehicle access is via the Toroweap and Mount Trumbull dirt roads (fig. 1). Unimproved dirt roads traverse other parts of the area except in designated wilderness. Extra fuel, two spare tires, and extra food and water are highly recommended for travelers in this remote area. The U.S. Bureau of Land Management, Arizona Strip Field Office, St. George, Utah manages most of the area. In addition, there are 12 sections belonging to the State of Arizona, about 12 sections are private land, and several sections are within the Grand Canyon National Park and Lake Mead National Recreational Area (U.S. Department of the Interior, 1993). The private land is in Potato Valley and Lake Valley, southwest and west of Mount Trumbull, and in Whitmore Canyon and Toroweap (Tuweap) Valley. Portions of the Sawmill Mountains, Mount Logan, and Mount Trumbull areas were originally established as part of the Dixie National Forest in 1904. In 1924, Dixie National Forest land became part of the Kaibab National Forest. Then on February 13, 1974, management of this part of the Kaibab National Forest was transferred to the Bureau of Land Management, Arizona Strip Field Office (personal commun. Becky Hammond, Bureau of Land Management, 1997). Mount Logan and part of the Sawmill Mountains are now designated as the Mount Logan Wilderness Area, and Mount Trumbull is designated as the Mount Trumbull Wilderness Area. Most of the map area is now part of the new Grand Canyon-Parashant Canyon National Monument established January 11, 2000. Lower elevations within Hells Hollow, Whitmore Canyon, Toroweap Valley, and Cove Canyon support a sparse growth of sagebrush, cactus, grass, and a variety of desert shrubs. Sagebrush, grass, cactus, cliffrose bush, pinion pine, and juniper trees thrive at elevations above 1,830 m (6,000 ft). Ponderosa pine and oak forests thrive at higher elevations in the Mount Trumbull and Mount Logan areas. Surface runoff within the map area drains south towards the Colorado River through Hells Hole, Hollow, Whitmore Canyon, Toroweap Valley, and Cove Canyon. Upper Toroweap Valley, upper Hells Hollow, and Whitmore Canyon are part of the physiographic area of Grand Canyon, but are not within Grand Canyon National Park (Billingsley and others, 1997). As of January 11, 2000, these areas are now part of the new Grand Canyon-Parashant

Miscellaneous Field Studies Map↗
USGS2016

Mercury in fish and macroinvertebrates from New York's streams and rivers: A compendium of data sources

The U.S. Geological Survey has compiled a list of existing data sets, from selected sources, containing mercury (Hg) concentration data in fish and macroinvertebrate samples that were collected from flowing waters of New York State from 1970 through 2014. Data sets selected for inclusion in this report were limited to those that contain fish and (or) macroinvertebrate data that were collected across broad areas, cover relatively long time periods, and (or) were collected as part of a broader-scale (e.g. national) study or program. In addition, all data sets listed were collected, processed, and analyzed with documented methods, and contain critical sample information (e.g. fish species, fish size, Hg species) that is needed to analyze and interpret the reported Hg concentration data. Fourteen data sets, all from state or federal agencies, are listed in this report, along with selected descriptive information regarding each data source and data set contents. Together, these 14 data sets contain Hg and related data for more than 7,000 biological samples collected from more than 700 unique stream and river locations between 1970 and 2014.

New York↗
USGS1985

Chemical and biological quality of selected lakes in Ohio, 1978 and 1979

Twenty-eight Ohio lakes were sampled by the U.S. Geological Survey and the Ohio Environmental Protection Agency for water-quality characteristics during the spring and summer of 1978 and 1979. This report is the third in a series covering a lake-sampling program that began in 1975. Data include water-column profiles of temperature, dissolved oxygen, pH, and specific conductance. Chemical, physical, and biological properties were measured at specific points in the water column, and selected physical and chemical properties also were measured in the principal inflows. The lakes were predominatly hard (120 180 milligrams per liter) to very hard water, although several soft-water lakes were found in southeastern Ohio. Calcium, bicarbonate, and sulfate were the principal dissolved constituents. Specific conductance ranged from 103 micromhos per centimeter (at 25 degrees Celsius) at Tycoon Lake, 1978, to 2,550 micromhos per centimeter at West Fork Mill Creek Lake, 1978. Thirteen lakes had trace-element concentrations that were above the limits for exceptional warm-water habitat recammended by the Ohio Environmental Protection Agency. Seasonal thermal gradients developed in most lakes deeper than 17 feet. Oxygen concentrations were zero or near zero during the summer sampling of the bottom water of all lakes having definite thermal gradients. Most anaerobic zones contained hydrogen sulfide and high concentrations of ammonia. All lakes were evaluated and classified by Carlson's trophic state index. Most of the lakes were classified as eutrophic. Blue-green algae (CyanophytaJ) dominated the summer algal communities. Fecal colifrom counts were within Ohio standards, although high (more than 1,000 colonies per 100 milliliters) fecal colifrom and fecal streptococcus counts were observed in West Fork Mill Creek Lake after significant runoff.

Open-File Report↗
USGS2007

Science and the storms: The USGS response to the hurricanes of 2005

This report is designed to give a view of the immediate response of the U.S. Geological Survey (USGS) to four major hurricanes of 2005: Dennis, Katrina, Rita, and Wilma. Some of this response took place days after the hurricanes; other responses included fieldwork and analysis through the spring. While hurricane science continues within the USGS, this overview of work following these hurricanes reveals how a Department of the Interior bureau quickly brought together a diverse array of its scientists and technologies to assess and analyze many hurricane effects. Topics vary from flooding and water quality to landscape and ecosystem impacts, from geotechnical reconnaissance to analyzing the collapse of bridges and estimating the volume of debris. Thus, the purpose of this report is to inform the American people of the USGS science that is available and ongoing in regard to hurricanes. It is the hope that such science will help inform the decisions of those citizens and officials tasked with coastal restoration and planning for future hurricanes. Chapter 1 is an essay establishing the need for science in building a resilient coast. The second chapter includes some hurricane facts that provide hurricane terminology, history, and maps of the four hurricanes’ paths. Chapters that follow give the scientific response of USGS to the storms. Both English and metric measurements are used in the articles in anticipation of both general and scientific audiences in the United States and elsewhere. Chapter 8 is a compilation of relevant ongoing and future hurricane work. The epilogue marks the 2-year anniversary of Hurricane Katrina. An index of authors follows the report to aid in finding articles that are cross-referenced within the report. In addition to performing the science needed to understand the effects of hurricanes, USGS employees helped in the rescue of citizens by boat and through technology by “geoaddressing” 911 calls after Katrina and Rita so that other rescuers could find persons trapped in attics and porches. They also delivered food and water to residents stranded along the lower Mississippi River for several days. That work is reported in chapter 3 of this volume. A great number of scientists contributed to this peer-reviewed report designed for a general audience. Because they work for USGS—an unbiased, multidisciplinary science organization that focuses on biology, geography, geology, geospatial information, and water—they are dedicated to the timely, relevant, and impartial study of the landscape and natural resources of the Nation, as well as natural hazards, like hurricanes, that threaten the Nation. To learn more about their work, visit the USGS Web site (www.usgs.gov).

Circular↗
USGS2017

Ecology of the macrophyte Podostemum ceratophyllum Michx. (Hornleaf riverweed), a widespread foundation species of eastern North American rivers

Podostemum ceratophyllum , commonly called Hornleaf Riverweed, occurs in mid-order montane and piedmont rivers of eastern North America, where the plant grows submerged and attached to rocks and stable substrates in swift, aerated water. Multiple studies, mostly conducted in the southern portions of the plant’s range, have shown that Podostemum can variously influence benthic communities in flowing waters. However, a synthetic review of the biology and ecology of the plant is needed to inform conservation, particularly because P. ceratophyllum is reported to be in decline in much of its range, for mostly unknown reasons. We have thus summarized the literature showing that Podostemum provides substantial habitat for invertebrates and fish, may be consumed by invertebrates, turtles, and other vertebrates, removes and sequesters dissolved elements (i.e., nitrogen, phosphorus, calcium, zinc, etc.) from the water column, and contributes organic matter to the detrital pool. Podostemum may be tolerant to some forms of pollution but appears vulnerable to sedimentation, epiphytic over-growth, and hydrologic changes that result in desiccation, and possibly increased herbivory pressure. Much remains unknown about Podostemum , including aspects of morphological variation, seed dispersal, and tolerance to changes in temperature and water chemistry. Nonetheless, Podostemum may be considered a foundation species, whose loss from eastern North American rivers is likely to affect higher trophic levels and ecosystem processes.

Aquatic Botany↗
USGS2017

Optical and biochemical properties of a southwest Florida whiting event

“Whiting” in oceanography is a term used to describe a sharply defined patch of water that contains high levels of suspended, fine-grained calcium carbonate (CaCO 3 ). Whitings have been reported in many oceanic and lake environments, and recently have been reported in southwest Florida coastal waters. Here, field and laboratory measurements were used to study optical, biological, and chemical properties of whiting waters off southwest Florida. No significant difference was found in chlorophyll a concentrations between whiting and outside waters (non-whiting water), but average particle backscattering coefficients in whiting waters were double those in outside waters, and remote sensing reflectance in whiting waters was higher at all wavelengths (400–700 nm). While other potential causes cannot be completely ruled out, particle composition and biochemical differences between sampled whiting water, contiguous water, and outside water indicate a biologically precipitated mode of whiting formation. Taxonomic examination of marine phytoplankton samples collected during a whiting event revealed a community dominated by autotrophic picoplankton and a small (<10 μm), centric diatom species, identified as Thalassiosira sp. through the use of scanning electron microscopy. Amorphous to fully formed crystals of CaCO 3 were observed along the girdle bands of Thalassiosira sp. cells and autotrophic picoplankton cells. Although carbonate parameters differed from whiting and contiguous to outside water, more sampling is needed to determine if these results are statistically significant.

Florida↗
USGS2021

Demethylation of methylmercury in bird, fish, and earthworm

Toxicity of methylmercury (MeHg) to wildlife and humans results from its binding to cysteine residues of proteins, forming MeHg-cysteinate (MeHgCys) complexes that hinder biological functions. MeHgCys complexes can be detoxified in vivo, yet how this occurs is unknown. We report that MeHgCys complexes are transformed into selenocysteinate (Hg(Sec)4) complexes in multiple animals from two phyla (a waterbird, freshwater fish, and earthworms) sampled in different geographical areas and contaminated by different Hg sources. In addition, high energy-resolution X-ray absorption spectroscopy and chromatography-ICP mass spectrometry of the waterbird liver support the binding of Hg(Sec)4 to selenoprotein P and biomineralization of Hg(Sec)4 to chemically inert nanoparticulate mercury selenide (HgSe). The results provide a foundation for understanding mercury detoxification in higher organisms, and suggest that the identified MeHgCys to Hg(Sec)4 demethylation pathway is common in nature.

Environmental Science & Technology↗
USGS2022

The future of fungi: Threats and opportunities

The fungal kingdom represents an extraordinary diversity of organisms with profound impacts across animal, plant, and ecosystem health. Fungi simultaneously support life, by forming beneficial symbioses with plants and producing life-saving medicines, and bring death, by causing devastating diseases in humans, plants, and animals. With climate change, increased antimicrobial resistance, global trade, environmental degradation, and novel viruses altering the impact of fungi on health and disease, developing new approaches is now more crucial than ever to combat the threats posed by fungi and to harness their extraordinary potential for applications in human health, food supply, and environmental remediation. To address this aim, the Canadian Institute for Advanced Research (CIFAR) and the Burroughs Wellcome Fund convened a workshop to unite leading experts on fungal biology from academia and industry to strategize innovative solutions to global challenges and fungal threats. This report provides recommendations to accelerate fungal research and highlights the major research advances and ideas discussed at the meeting pertaining to 5 major topics: (1) Connections between fungi and climate change and ways to avert climate catastrophe; (2) Fungal threats to humans and ways to mitigate them; (3) Fungal threats to agriculture and food security and approaches to ensure a robust global food supply; (4) Fungal threats to animals and approaches to avoid species collapse and extinction; and (5) Opportunities presented by the fungal kingdom, including novel medicines and enzymes.

G3 Genes, Genomes, Genetics↗
USGS1975

Lakes in the greater Denver area, Front Range urban corridor, Colorado

The many lakes in Colorado's semiarid Front Range Urban Corridor have an especially high value. In the past they were used primarily to store water for irrigation and domestic uses. Some were used for recreation. Today, rapid suburban development in the Front Range Urban Corridor is accompanied by a shift of the principal use of many lakes to recreation and to centers of real estate developments. These same lakes are threatened with a general deterioration of chemical and biological quality caused by heavy use and development of the surrounding area. The purpose of this report is to present the results of an inventory of the lakes in the central one-third of the Colorado Front Range Urban Corridor. This inventory provides information that might be helpful in planning the best and most beneficial use of lakes in an area of rapid population growth. The report includes data on lake size and water quality. Size data are included on most of the lakes of 2 hectares (20,000 m 2 , or about 5 acres) or greater, and water-quality data are provided on most lakes larger than 10 hectares (about 25 acres). Bodies of water resulting form excavation of gravel (borrow pits) were generally not included in the inventory.

Colorado↗
USGS2023

Assessment of potential recovery viability for Colorado Pikeminnow Ptychocheilus lucius in the Colorado River in Grand Canyon

Colorado Pikeminnow Ptychocheilus lucius, the Colorado River’s top native predatory fish, was historically distributed from the Gulf of California delta to the upper reaches of the Green, Colorado, and San Juan rivers in the Colorado River basin in the Southwestern US. In recent decades Colorado Pikeminnow population abundance has declined, primarily due to predation by warmwater nonnative fish and habitat modification following dam construction. Small, reproducing populations remain in the Green and upper Colorado rivers, but their current population trajectory is declining and the San Juan River population is maintained primarily through stocking. As such, establishment of an additional population could aid recovery efforts and increase the species’ resilience and population redundancy. The Colorado River in Grand Canyon once supported Colorado Pikeminnow, but until recently habitat suitability in this altered reach was considered low due to a depressed thermal regime and abundant nonnative predators. Climate change and ongoing drought has presented an opportunity to evaluate the feasibility of native fish restoration in a system where declining reservoir storage has led to warmer releases and re-emergence of riverine habitat. These changes in the physical attributes of the river have occurred in concert with a system-wide decline in nonnative predators. Conditions ten years ago were not compatible with reintroduction feasibility in Grand Canyon; however, due to rapidly changing conditions an expert Science Panel was convened to evaluate whether the physical and biological attributes of this reach could now support various life stages of Colorado Pikeminnow. Here, we report on the evaluation process and outcome from the Science Panel, which developed a science-based recommendation to the U.S. Fish and Wildlife Service on reintroduction feasibility. The Science Panel concluded that current habitat attributes in Grand Canyon could satisfy some, but perhaps not all, Colorado Pikeminnow life history requirements. This reach has the potential to support adult and sub-adult growth, foraging, migrations, and spawning, but low juvenile survival may limit recruitment. However, populations of other native species are successfully reproducing and increasing in western Grand Canyon, even in areas once considered suboptimal habitat. Should managers decide to move to the next phase of this process, actions such as experimental stocking and monitoring, telemetry studies, bioenergetics modeling, and laboratory-based research may provide additional information to further evaluate a potential reintroduction effort in this rapidly changing but highly altered system.

Arizona↗
USGS1982

Bibliography of references to avian botulism: Update

This bibliography, first compiled in 1970 (Allen and Wilson 1977) and published in 1977 in response to many requests for information on avian botulism, has been updated to include the literature published through 1980. In general, only articles dealing primarily with the avian disease are included, as opposed to those concerned with the various aspects of the biology of Clostridium botulinum , either type C or E. A few exceptions, such as Bengtson's report of the first isolation and description of the type C organism, are included for their historical interest. Progress reports and other administrative documents not available for distribution on request are excluded, as are most textbook accounts, which are generally summaries of work published elsewhere. This bibliography was a cooperative effort by the National Wildlife Health Laboratory, U.S. Fish and Wildlife Service, and the U.S. National Park Service. The National Park Service provided partial funding for the work through Contract No. 89100-0491. Although the authors attempted to list every important reference, they make no claim to complete coverage of the published literature. The authors will be grateful to users of the bibliography who call attention to errors or omissions. Wayne I. Jensen (Retired) Milton Friend, Director, National Wildlife Health Laboratory

Special Scientific Report - Wildlife↗
USGS2002

Ecological effects on streams from forest fertilization: Literature review and conceptual framework for future study in the western Cascades

Fertilization of forests with urea-nitrogen has been studied numerous times for its effects on water quality. Stream nitrogen concentrations following fertilization are typically elevated during winter, including peaks in the tens-of-thousands of parts per billion range, with summer concentrations often returning to background or near-background levels. Despite these increases, water-quality criteria for nitrogen have rarely been exceeded. However, such criteria are targeted at fish toxicity or human health and are not relevant to concentrations that could cause ecological disturbances. Studies of the responses of stream biota to fertilization have been rare and have targeted either immediate, toxicity-based responses or used methods insensitive to ongoing ecological processes. This report reviews water-quality studies following forest fertilizations, emphasizing Cascade streams in the Pacific Northwest and documented biological responses in those streams. A conceptual model predicting potential ecological response to fertilization, which includes effects on algal growth and primary production, is presented. In this model, applied fertilizer nitrogen reaching streams is mostly exported during winter. However, some nitrogen retained in soils or stream and riparian areas may become available to aquatic biota during spring and summer. Biological responses may be minimal in small streams nearest to application because of light limitation, but may be elevated downstream where light is sufficient to allow algal growth. Ultimately, algal response could be greatest in downstream reaches, although ambient nutrient concentrations remain low due to uptake and benthic nutrient recycling. Ground-water flow paths and hyporheic processing could be critical in determining the fate of applied nitrogen. A framework is provided for testing this response in the Little River watershed, a tributary to the North Umpqua River, Oregon, at basic and intensive levels of investigation.

Oregon↗
USGS2021

Estimating invertebrate response to changes in total nitrogen, total phosphorus, and specific conductance at sites where invertebrate data are unavailable

The purpose of this report is to describe a possible approach to estimate changes in invertebrate taxa richness at sites with known water-quality trends but no invertebrate data. In this study, data from 1,322 sites were used to describe invertebrate response to changes in total nitrogen, total phosphorus, or specific conductance, and to estimate changes in invertebrate taxa richness at 259 sites with reported water-quality trends but no invertebrate data. Sites were stratified using propensity score analysis to control for confounding factors (for example, climate, land use, land cover). Generalized linear models were developed to describe changes in invertebrate taxa richness along gradients of total nitrogen, total phosphorus, and specific conductance values. The magnitude and direction of invertebrate response to gradients of water quality varied among parameters and strata, with changes in invertebrate taxa richness per natural log unit change in concentration ranging from –7 to +6. However, estimated changes in invertebrate taxa richness at sites with known water-quality trends were much less and did not exceed three taxa until changes in concentration were greater than 50 percent. Applying this approach provides (1) a first screening to identify where changes in invertebrate taxa richness are likely to occur and (2) the necessary groundwork to improve estimation of invertebrate response to trends in water quality where biological data are lacking.

Scientific Investigations Report↗
USGS2010

Olympic Fisher Reintroduction Project: 2010 Progress Report

The 2010 progress report is a summary of the reintroduction, monitoring, and research efforts undertaken during the third year of the Olympic fisher reintroduction project. Jeffrey C. Lewis of Washington Department of Fish and Wildlife, Patti J. Happe of Olympic National Park, and Kurt J. Jenkins of U. S. Geological Survey are the principal investigators of the monitoring and research program associated with the reintroduction. David J. Manson of Olympic National Park is the lead biological technician.

Washington↗