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Ecosystems

The Fifth National Climate Assessment updates the evidence regarding how climate change influences ecosystems, biological diversity, and the implications for changes to critical ecosystem services—as noted in the key messages above (McElwee et al., 2023). Large-scale transformational changes to ecosystems are occurring, including—but not limited to—land-use conversion, hydrological alteration, and fire regimes. Implications of such transformational change include ecosystem capacity to maintain biological diversity and ecosystem services, impacting recreational opportunities (e.g., hunting and fishing, birding, ecotourism) and agriculture production (McElwee et al., 2023). A central tenet of the Fifth National Climate Assessment regarding ecosystems was the shifts to alternative states and how the Resist-Accept-Direct (RAD) framework may guide the adaptive management of ecosystems moving forward (Lynch et al., 2022). Nebraska is in the northern Great Plains, where extremes in climate and resulting ecosystem processes are experienced (Knapp et al., 2023). Pressures on ecosystems to provide essential services, including healthy soil and water to benefit humans and animals, will inevitably impact economic development, urban and rural communities, and fish and wildlife populations as climate change continues (Knapp et al., 2023). All ecosystems will be impacted in Nebraska, but aquatic systems—wetlands, aquifers, lakes, streams, and rivers—may be most impacted, given the scarcity of water as human demand (i.e., agriculture and a growing population) persists and increases (Bathke et al., 2014). Major knowledge gaps remain regarding how fish and wildlife populations will persist in changing environments. Past changes, including large-scale land conversion, water delivery systems, and water storage (construction of reservoirs), suggest that some species can adapt to novel environments and shift distributions. However, many more species may be maladapted to the expected changes in climate. Species may be unable to move to suitable habitats, and biological constraints under rapidly changing conditions may impede adaptation— resulting in extirpation and potential extinction. Further, changing conditions open multiple pathways for invasive species and novel diseases, impacting native fish populations, wildlife populations, and human health.

Nebraska

U.S. Geological Survey Chesapeake science strategy, 2015-2025—Informing ecosystem management of America’s largest estuary

Executive Summary The U.S. Geological Survey (USGS) has the critical role of providing scientific information to improve the understanding and management of the Chesapeake Bay ecosystem. The USGS works with Federal, State, and academic science partners to provide research and monitoring, and communicate results of these activities to enhance ecosystem management for both the Chesapeake and other National ecosystems. The USGS Chesapeake Science Strategy was prepared to guide science activities to address the Chesapeake Bay Watershed Agreement (2014–2025), to support the Department of the Interior (DOI) involvement in the Bay restoration efforts, and align with the USGS Mission Area (MA) Science strategies. The Chesapeake Bay is our Nation’s largest estuary, and provides critical goods and services to the people, fish, and wildlife that use the 64,000-square-mile watershed. The Chesapeake Bay watershed contains over 3,600 species of fish, wildlife, and plants and provides spawning grounds for many ecologically and economically important species including striped bass and blue crabs. The Bay watershed lies in the heart of the Atlantic Flyway and has 29 species of waterfowl, about 1 million of which winter in the region. The size of the Chesapeake seafood harvest is third in the Nation, only behind the Atlantic and Pacific Oceans. Along with agricultural production, tourism, and recreation, the estimated economic value of the services from the Chesapeake Bay watershed is about $100 billion annually. However, the health of the Bay ecosystem began to decline at the beginning of the 20th century due to overfishing and increasing human population and associated land change. The Chesapeake Bay Program (CBP) is the Federal-State cooperative effort that started in 1983 to restore the Bay and watershed. Given the ecological and economic importance of the Chesapeake ecosystem, President Obama issued an Executive Order (EO) in 2009 for increased Federal leadership in the CBP to enhance the pace of restoration, and the supporting strategy was released in 2010. The EO directed the Federal Government, including the U.S. Department of the Interior (DOI), represented by the National Park Service (NPS), the U.S. Fish & Wildlife Service (FWS), and the USGS, to expand its efforts and increase leadership to restore the Bay and its watershed. The USGS and other Federal agencies expanded their activities in 2011 to meet the President’s Chesapeake EO. Since the EO was released, there have been several important changes in the USGS, DOI, and the CBP including: (1) the Chesapeake Bay Watershed Agreement, (2) increased DOI leadership in the CBP, and (3) the release of the USGS MA science strategies. The EO strategy served as a foundation for the Chesapeake Bay Watershed Agreement that was signed in 2014 by the CBP Partners, and has goals and outcomes to be met by 2025. The USGS developed the Chesapeake Science Strategy to guide our activities to address the Chesapeake Bay Watershed Agreement, DOI leadership in the CBP, and USGS MA strategies. Improving the understanding of fish and wildlife population and health, and the factors affecting their condition is the emphasis of the Strategy. The science focuses on documenting the critical ecosystem connections in the Chesapeake, and providing implications to enhance decision making for restoration and conservation activities. The revised Strategy has four themes that address 7 of the 10 goals in the Chesapeake Bay Watershed Agreement: Enhance science to support restoration, and conservation of fish, wildlife, and critical habitats. Characterize and explain changes in water quality, and its effect on freshwater and estuarine ecosystems. Assess and forecast effects of climate and land change on ecosystem conditions. Synthesize and provide information to support ecosystem management. The structure and function of biological communities of the Bay and its watershed are extremely complex and are affected by a variety of stressors and conditions. To better define the issues being addressed, the USGS has developed cross-cutting questions that define some of the most important scientific challenges where multiple disciplines and collaborators are needed to address an issue. The initial questions include: How do land and climate changes affect freshwater fish communities, health, and habitats? What are the relations among land use, water quality, contaminants, and the health of fish and wildlife? How are coastal wetlands and their carrying capacity for waterbirds affected by changing climate and land use? How is the water quality of rivers and estuaries responding to restoration actions, and changing land use? What are some of the best opportunities for management actions to benefit multiple restoration outcomes?

Delaware, Maryland, New York, Pennsylvania, Virgin

Positive but un-sustained wildlife community responses to reserve expansion and mammal reintroductions in South Africa

The creation and expansion of protected areas, coupled with wildlife reintroductions, are increasingly used as conservation measures to combat wildlife declines worldwide. Although these types of restoration efforts are expected be beneficial to wildlife populations, variable species management and interactions among species within complex food webs have the potential to lead to unintended species-specific responses to reserve expansion which can counteract the anticipated positive effects. We used a multi-season camera trap study to investigate community-wide responses of wildlife to a reserve expansion and associated wildlife releases in South Africa. We analyzed the camera trap data using community occupancy and N-mixture models to assess how the occupancy and intensity of use of individual species changed in the four seasons following reserve expansion. We found species-specific responses to reserve expansion, although responses were generally positive in occupancy and intensity of use but un-sustained. The apex predator, the lion ( Panthera leo ) and the majority of managed herbivores exhibited sustained or delayed positive responses, whereas most subordinate predators and unmanaged herbivores had short-lived, fluctuating, or neutral responses. Interactive effects of top-down suppression, competitive pressure, and increased space and food resources likely resulted in the temporally-variable responses of most species. Although no species responded negatively to reserve expansion and mammal reintroductions, the lack of sustained positive responses for most species indicates the complexities of implementing conservation actions to benefit multiple wildlife species. Our results highlight the importance of monitoring the entire wildlife community following management actions such as reserve expansion or wildlife reintroductions.

Biological Conservation

Defining fine-scaled population structure among continuously distributed populations

Understanding wildlife population structure and connectivity can help managers identify conservation strategies, as structure can facilitate the study of population changes and habitat connectivity can provide information on dispersal and biodiversity. To facilitate the use of wildlife monitoring data for improved adaptive management, we developed a novel approach to define hierarchical tiers (multiple scales) of population structure. We defined population structure by combining graph theory with biological inference about dispersal capability (based on movement, gene flow, and habitat condition) and functional processes affecting movement (e.g. habitat selection across scales of landscape preferences). First, we developed least-cost paths between high fidelity sites (habitat patches) using a cost surface, informed from functional processes of habitat characteristics to account for resistance of inter-patch movements. Second, we combined the paths into a multi-path graph construct. Third, we used information on potential connectivity (dispersal distances) and functional connectivity (permeability of fragmented landscapes based on selection preferences) to decompose the graph into hierarchical tiers of connected subpopulations, denoting the degree that dispersal affected population structure. As a case study, we applied our approach across the greater sage-grouse ( Centrocercus urophasianus ) range, a species of conservation concern in western United States. We described the relative importance of local populations and where to potentially avoid landscape disturbances that may negatively affect population connectivity using centrality measures supported by graph theory, and we demonstrated close alignment of the resulting population structure with population densities. This method can be adapted for other species with site fidelity and used as a management tool to evaluate population trends and responses to landscape changes across different temporal and spatial scales.

Methods in Ecology and Evolution

In hot water? Patterns of macroinvertebrate abundance in Arctic thaw ponds and relationships with environmental variables

Ongoing environmental change across the Arctic is affecting many freshwater ecosystems, including small thaw ponds that support macroinvertebrates, thus potentially affecting important forage for fish and bird species. To accurately predict how fish and wildlife that depend on these macroinvertebrates will be affected by ecosystem change at high latitudes, understanding proximate factors that influence macroinvertebrate abundance is critical. To better understand factors that affect spatial and seasonal (i.e. phenology) patterns in abundance, we collected macroinvertebrates throughout the growing season of a single year from 33 thaw ponds on the Arctic Coastal Plain in northern Alaska. We used hierarchical N -mixture models to provide detection-corrected estimates of abundance (of the population exposed to sampling) in relation to pond type and seasonal patterns in environmental variables (i.e., cumulative water temperature, nutrient levels) for five taxonomic groups representing key food items for birds and fish—Anostraca (Arthropoda: Branchiopoda), Chironomidae (Insecta: Diptera), Cladocera (Arthropoda: Branchiopoda), Limnephilidae (Insecta: Trichoptera), and Physidae (Mollusca: Gastropoda). For three of five taxa (Anostraca, Cladocera, Limnephilidae), abundance varied across pond types and was lower in pond types where water temperatures increased more rapidly. Further, seasonal temperature profiles in ponds affected phenology, suggesting that seasonal patterns in abundance were influenced by changes in water temperature. These findings suggest that increases in water temperature in northern areas could alter macroinvertebrate phenology, possibly with consequences for upper level predators if availability of macroinvertebrate prey is reduced or shifted seasonally. Our results will facilitate improved predictions of how changing abiotic conditions could affect inland waters in northern areas, a critical need for conservation of Arctic wildlife and ecosystems.

Alaska

Baylisascaris Larva Migrans

Summary Baylisascaris procyonis , the common raccoon roundworm, is the most commonly recognized cause of clinical larva migrans (LM) in animals, a condition in which an immature parasitic worm or larva migrates in a host animal’s tissues, causing obvious disease. Infection with B. procyonis is best known as a cause of fatal or severe neurologic disease that results when the larvae invade the brain, the spinal cord, or both; this condition is known as neural larva migrans (NLM). Baylisascariasis is a zoonotic disease, that is, one that is transmissible from animals to humans. In humans, B. procyonis can cause damaging visceral (VLM), ocular (OLM), and neural larva migrans. Due to the ubiquity of infected raccoons around humans, there is considerable human exposure and risk of infection with this parasite. The remarkable disease-producing capability of B. procyonis in animals and humans is one of the most significant aspects of the biology of ascarids (large roundworms) to come to light in recent years. Infection with B. procyonis has important health implications for a wide variety of free-ranging and captive wildlife, zoo animals, domestic animals, as well as human beings, on both an individual and population level. This report, eighth in the series of U.S. Geological Survey Circulars on zoonotic diseases, will help us to better understand the routes of Baylisascaris procyonis infections and how best to adequately monitor this zoonotic disease.

Circular

Earth science and public health: Proceedings of the Second National Conference on USGS Health-Related Research

The mission of the U.S. Geological Survey (USGS) is to serve the Nation by providing reliable scientific information to describe and understand the earth; minimize loss of life and property from natural disasters; manage water, biological, energy, and mineral resources; and enhance and protect our quality of life. As the Nation?s largest water, earth, and biological science and civilian mapping agency, the USGS can play a significant role in providing scientific knowledge and information that will improve our understanding of the relations of environment and wildlife to human health and disease. USGS human health-related research is unique in the Federal government because it brings together a broad spectrum of natural science expertise and information, including extensive data collection and monitoring on varied landscapes and ecosystems across the Nation. USGS can provide a great service to the public health community by synthesizing the scientific information and knowledge on our natural and living resources that influence human health, and by bringing this science to the public health community in a manner that is most useful. Partnerships with health scientists and managers are essential to the success of these efforts. USGS scientists already are working closely with the public health community to pursue rigorous inquiries into the connections between natural science and public health. Partnering agencies include the Armed Forces Institute of Pathology, Agency for Toxic Substances Disease Registry, Centers for Disease Control and Prevention, U.S. Environmental Protection Agency, Food and Drug Administration, Mine Safety and Health Administration, National Cancer Institute, National Institute of Allergy and Infectious Disease, National Institute of Environmental Health Sciences, National Institute for Occupational Safety and Health, U.S. Public Health Service, and the U.S. Army Medical Research Institute of Infectious Diseases. Collaborations between public health scientists and earth scientists can lead to improved solutions for existing and emerging environmental health problems. This report summarizes the presentations and discussions held at the Second National Conference on USGS Health-Related Research, held at the USGS national headquarters in Reston, Virginia. The report presents 68 abstracts of technical presentations made at the conference and summaries of six topical breakout sessions. The abstracts cover a broad range of issues and demonstrate connections between human health and the quality and condition of our environment and wildlife. The summaries of the topical breakout sessions present ideas for advancing interdisciplinary science in areas of earth science and human health.

Scientific Investigations Report

Distribution, migration behavior, habitat use, and species interactions of fall-released juvenile hatchery spring Chinook salmon on the Deschutes River, Oregon, 2002, Annual report 2002

In a review of National Fish Hatcheries (NFH), the U.S. Fish and Wildlife Service (USFWS) identified the need to assess the fate of hatchery-reared fish and their potential effect on the aquatic community (USFWS 1998). Additionally, in the Columbia River Biological Opinion, the National Marine Fisheries Service (NMFS) recommended monitoring and evaluating ecological interactions between hatchery and wild fish (NMFS 1999). In 2002, a study was designed to investigate the fate of hatchery-reared fish and to assess habitat use and fish interactions in the Deschutes River, Oregon.

Oregon

Contraception can lead to trophic asynchrony between birth pulse and resources

Abiotic inputs such as photoperiod and temperature can regulate reproductive cyclicity in many species. When humans perturb this process by intervening in reproductive cycles, the ecological consequences may be profound. Trophic mismatches between birth pulse and resources in wildlife species may cascade toward decreased survival and threaten the viability of small populations. We followed feral horses (Equus caballus) in three populations for a longitudinal study of the transient immunocontraceptive porcine zona pellucida (PZP), and found that repeated vaccinations extended the duration of infertility far beyond the targeted period. After the targeted years of infertility, the probability of parturition from post-treated females was 25.6% compared to 64.1% for untreated females, when the data were constrained only to females that had demonstrated fertility prior to the study. Estimated time to parturition increased 411.3 days per year of consecutive historical treatment. Births from untreated females in these temperate latitude populations were observed to peak in the middle of May, indicating peak conception occurred around the previous summer solstice. When the post-treated females did conceive and give birth, parturition was an estimated 31.5 days later than births from untreated females, resulting in asynchrony with peak forage availability. The latest neonate born to a post-treated female arrived 7.5 months after the peak in births from untreated females, indicating conception occurred within 24–31 days of the winter solstice. These results demonstrate surprising physiological plasticity for temperate latitude horses, and indicate that while photoperiod and temperature are powerful inputs driving the biological rhythms of conception and birth in horses, these inputs may not limit their ability to conceive under perturbed conditions. The protracted infertility observed in PZP-treated horses may be of benefit for managing overabundant wildlife, but also suggests caution for use in small refugia or rare species.

PLoS ONE

Exposure to domoic acid is an ecological driver of cardiac disease in southern sea otters

Harmful algal blooms produce toxins that bioaccumulate in the food web and adversely affect humans, animals, and entire marine ecosystems. Blooms of the diatom Pseudo-nitzschia can produce domoic acid (DA), a toxin that most commonly causes neurological disease in endothermic animals, with cardiovascular effects that were first recognized in southern sea otters. Over the last 20 years, DA toxicosis has caused significant morbidity and mortality in marine mammals and seabirds along the west coast of the USA. Identifying DA exposure has been limited to toxin detection in biological fluids using biochemical assays, yet measurement of systemic toxin levels is an unreliable indicator of exposure dose or timing. Furthermore, there is little information regarding repeated DA exposure in marine wildlife. Here, the association between long-term environmental DA exposure and fatal cardiac disease was investigated in a longitudinal study of 186 free-ranging sea otters in California from 2001 – 2017, highlighting the chronic health effects of a marine toxin. A novel Bayesian spatiotemporal approach was used to characterize environmental DA exposure by combining several DA surveillance datasets and integrating this with life history data from radio-tagged otters in a time-dependent survival model. In this study, a sea otter with high DA exposure had a 1.7-fold increased hazard of fatal cardiomyopathy compared to an otter with low exposure. Otters that consumed a high proportion of crab and clam had a 2.5- and 1.2-times greater hazard of death due to cardiomyopathy than otters that consumed low proportions. Increasing age is a well-established predictor of cardiac disease, but this study is the first to identify that DA exposure affects the risk of cardiomyopathy more substantially in prime-age adults than aged adults. A 4-year-old otter with high DA exposure had 2.3 times greater risk of fatal cardiomyopathy than an otter with low exposure, while a 10-year old otter with high DA exposure had just 1.2 times greater risk. High Toxoplasma gondii titers also increased the hazard of death due to heart disease 2.4-fold. Domoic acid exposure was most detrimental for prime-age adults, whose survival and reproduction are vital for population growth, suggesting that persistent DA exposure will likely impact long-term viability of this threatened species. These results offer insight into the pervasiveness of DA in the food web and raise awareness of under-recognized chronic health effects of DA for wildlife at a time when toxic blooms are on the rise.

California

Alaska

Alaska is the largest state in the Nation, almost one-fifth the size of the combined lower 48 United States, and is rich in natural capital resources. Alaska is often identified as being on the front lines of climate change since it is warming faster than any other state and faces a myriad of issues associated with a changing climate. The cost of infrastructure damage from a warming climate is projected to be very large, potentially ranging from $110 to $270 million per year, assuming timely repair and maintenance. Although climate change does and will continue to dramatically transform the climate and environment of the Arctic, proactive adaptation in Alaska has the potential to reduce costs associated with these impacts. This includes the dissemination of several tools, such as guidebooks to support adaptation planning, some of which focus on Indigenous communities. While many opportunities exist with a changing climate, economic prospects are not well captured in the literature at this time. As the climate continues to warm, there is likely to be a nearly sea ice-free Arctic during the summer by mid-century. Ocean acidification is an emerging global problem that will intensify with continued carbon dioxide (CO 2 ) emissions and negatively affects organisms. Climate change will likely affect management actions and economic drivers, including fisheries, in complex ways. The use of multiple alternative models to appropriately characterize uncertainty in future fisheries biomass trajectories and harvests could help manage these challenges. As temperature and precipitation increase across the Alaska landscape, physical and biological changes are also occurring throughout Alaska’s terrestrial ecosystems. Degradation of permafrost is expected to continue, with associated impacts to infrastructure, river and stream discharge, water quality, and fish and wildlife habitat. Longer sea ice-free seasons, higher ground temperatures, and relative sea level rise are expected to exacerbate flooding and accelerate erosion in many regions, leading to the loss of terrestrial habitat in the future and in some cases requiring entire communities or portions of communities to relocate to safer terrain. The influence of climate change on human health in Alaska can be traced to three sources: direct exposures, indirect effects, and social or psychological disruption. Each of these will have different manifestations for Alaskans when compared to residents elsewhere in the United States. Climate change exerts indirect effects on human health in Alaska through changes to water, air, and soil and through ecosystem changes affecting disease ecology and food security, especially in rural communities. Alaska’s rural communities are predominantly inhabited by Indigenous peoples who may be disproportionately vulnerable to socioeconomic and environmental change; however, they also have rich cultural traditions of resilience and adaptation. The impacts of climate change will likely affect all aspects of Alaska Native societies, from nutrition, infrastructure, economics, and health consequences to language, education, and the communities themselves. The profound and diverse climate-driven changes in Alaska’s physical environment and ecosystems generate economic impacts through their effects on environmental services. These services include positive benefits directly from ecosystems (for example, food, water, and other resources), as well as services provided directly from the physical environment (for example, temperature moderation, stable ground for supporting infrastructure, and smooth surface for overland transportation). Some of these effects are relatively assured and in some cases are already occurring. Other impacts are highly uncertain, due to their dependence on the structure of global and regional economies and future human alterations to the environment decades into the future, but they could be large. In Alaska, a range of adaptations to changing climate and related environmental conditions are underway and others have been proposed as potential actions, including measures to reduce vulnerability and risk, as well as more systemic institutional transformation.

Report

Biology: Integrating core to essential variables (Bio-ICE) task team report for marine mammals

Marine mammals are wide-ranging, relatively long-lived organisms that play a crucial role in maintaining healthy ocean ecosystems. Often referred to as ecosystem engineers and sentinel species in marine ecosystems, these charismatic megafauna feed at a variety of trophic levels, affecting food web dynamics and cycling of chemicals and nutrients in the water column as well as in benthic habitats, both nearshore and in the deep ocean. An understanding of their abundance and distribution is an essential starting point for evaluating their role in ocean ecosystems. Accordingly, marine mammals have been included among key variables to monitor in ocean observing systems, from core variables for the U.S. Integrated Ocean Observing System (IOOS) to an Essential Ocean Variable (EOV) for the Global Ocean Observing System (GOOS). They also contribute to several Essential Biodiversity Variables (EBVs) for the Group on Earth Observations Biodiversity Observation Network (GEO BON). Further, evaluation of the health of marine mammal populations will help deliver societal benefits by contributing to the UN Decade of Ocean Science for Sustainable Development; informing reporting activities such as the World Ocean Assessment; and supporting achievement of Sustainable Development Goal 14, the post-2020 framework for the Convention for Biological Diversity, and a new treaty for conservation and sustainable use of marine biodiversity beyond national jurisdiction. In the U.S., the National Marine Fisheries Service (NMFS) and the U.S. Fish and Wildlife Service (FWS) are required to produce stock assessments for marine mammals under the Marine Mammal Protection Act (MMPA, 16 U.S.C. §1371 et seq.). Stock assessment analyses require accurate, up to-date information on abundance and distribution to inform appropriate management and/or conservation measures. Despite the availability of information on abundance and distribution within the stock assessment reports, availability and accessibility of the underlying data to the broader ocean observing community and contribution to EOVs remain inconsistent.

Report

Extracting exotic annual grass phenology and climate relations in western U.S. rangeland ecoregions

This research builds upon the extensive body of work to model exotic annual grass (EAG) characteristics and invasion. EAGs increase wildland fire risk and intensifies wildland fire behavior in western U.S. rangelands. Therefore, understanding characteristics of EAG growth increases understanding of its dynamics and can inform rangeland management decisions. To better understand EAG phenology and spatial distribution, monthly weather (precipitation, minimum and maximum temperature) variables were analyzed for 24 level III ecoregions. This research characterizes EAGs’ phenology identified by a normalized difference vegetation index (NDVI) threshold-based interpolation technique. An EAG phenology metric model was used to estimate a growing season dynamic for the years 2017–2021 for shrub and herbaceous land cover types in the western conterminous United States (66% of the area). The EAG phenology metrics include six growing season metrics such as start of season time, end of season time, and time of maximum NDVI during the growing season. The models’ cross validation results for Pearson’s r ranged from 0.88 to 0.95. Increased understanding of the effects that weather conditions have on EAG growth and spatial distribution can help land managers develop time-sensitive plans to protect entities deemed valuable to society like native habitat, wildlife, recreational areas, and air quality.

western rangeland ecoregions

Temporal dynamics of sagebrush songbird abundance in relation to energy development

Spatial aspects of wildlife responses to human-induced habitat change have been examined frequently, yet the temporal dynamics of responses remain less understood. We tested alternative hypotheses for how the abundance of a suite of declining songbirds in relation to energy development changed over time. We conducted point counts at two natural gas fields during two periods spanning a decade (2008–2009 and 2018–2019), and compared the abundance of sagebrush songbirds across a gradient of surface disturbance between study periods (trend-by-time). We also assessed changes in the abundance of birds between study periods relative to additional development that had occurred (trend-over-time). We predicted that abundance responses to surface disturbance would be more negative during the second period, regardless of additional disturbance that had occurred, because of previously observed inverse relationships between surface disturbance and nest survival at our sites. Contrary to our predictions, abundance responses attenuated by the second time period for two of three species, Brewer's sparrow and sage thrasher (the latter at one energy field only). Sagebrush sparrow abundance, however, consistently decreased with surface disturbance within and between periods. Sage thrasher abundance consistently decreased with surface disturbance at one of the gas fields, and the probability of colonization by thrashers between study periods was lower where additional surface disturbance had occurred. Our results highlight the importance of revisiting wildlife responses to anthropogenic habitat changes over time, to clarify the severity and longevity of effects.

Biological Conservation

Museum genomics provide evidence for persistent genetic differentiation in a threatened seabird species in the Western Atlantic

Connectivity among wildlife populations facilitates exchange of genetic material between groups. Changes to historical connectivity patterns resulting from anthropogenic activities can therefore have negative consequences for genetic diversity, particularly for small or isolated populations. DNA obtained from museum specimens can enable direct comparison of temporal changes in connectivity among populations, which can aid in conservation planning and contribute to understanding of population declines. However, museum DNA can be degraded and only available in low quantities, rendering it challenging for use in population genomic analyses. Applications of genomic methodologies such as targeted sequencing address this issue by enabling capture of shared variable sites, increasing quantity and quality of recovered genomic information. We used targeted sequencing of Ultra-conserved Elements (UCEs) to evaluate potential changes in connectivity and genetic diversity of roseate terns ( Sterna dougallii ) with a breeding distribution in the Northwestern Atlantic and the Caribbean. Both populations experienced range contractions and population declines due to anthropogenic activity in the 20 th century, which has the potential to alter historical connectivity regimes. Instead, we found that the two populations were differentiated historically as well as contemporaneously, with little evidence of migration between them for either time period. We also found no evidence for temporal changes in genetic diversity, although these interpretations may have been limited due to sequencing artifacts caused by the degraded nature of the museum samples. Population structuring in migratory seabirds is typically reflective of low rates of divergence and high connectivity among geographically segregated subpopulations. Our contrasting results suggest the potential presence of ecological mechanisms driving population differentiation, and highlight the value of targeted sequencing on DNA derived from museum specimens to uncover long-term patterns of genetic differentiation in wildlife populations.

Integrative and Comparative Biology

Agricultural chemicals and the quality of prairie-pothole wetlands for adult and juvenile waterfowl - What are the concerns?

A review of the literature and results of ongoing studies indicates that the potential for agricultural chemicals, particularly aerially-applied insecticides, to enter prairie potholes and reduce the quality of these wetlands for waterfowl is great, and that a coordinated effort by farmers, wildlife managers, and regulatory agencies is needed to minimize these impacts

Biological Report

Variation in fire regimes of the Rocky Mountains: Implications for avian communities and fire management

Information about avian responses to fire in the U.S. Rocky Mountains is based solely on studies of crown fires. However, fire management in this region is based primarily on studies of low-elevation ponderosa pine ( Pinus ponderosa ) forests maintained largely by frequent understory fires. In contrast to both of these trends, most Rocky Mountain forests are subject to mixed severity fire regimes. As a result, our knowledge of bird responses to fire in the region is incomplete and skewed toward ponderosa pine forests. Research in recent large wildfires across the Rocky Mountains indicates that large burns support diverse avifauna. In the absence of controlled studies of bird responses to fire, we compared reproductive success for six cavity-nesting species using results from studies in burned and unburned habitats. Birds in ponderosa pine forests burned by stand-replacement fire tended to have higher nest success than individuals of the same species in unburned habitats, but unburned areas are needed to serve species dependent upon live woody vegetation, especially foliage gleaners. Over the last century, fire suppression, livestock grazing, and logging altered the structure and composition of many low-elevation forests, leading to larger and more severe burns. In higher elevation forests, changes have been less marked. Traditional low-severity prescribed fire is not likely to replicate historical conditions in these mixed or high-severity fire regimes, which include many mixed coniferous forests and all lodgepole pine ( Pinus contorta ) and spruce-fi r ( Picea-Abies ) forests. We suggest four research priorities: (1) the effects of fire severity and patch size on species’ responses to fire, (2) the possibility that postfire forests are ephemeral sources for some bird species, (3) the effect of salvage logging prescriptions on bird communities, and (4) experiments that illustrate bird responses to prescribed fire and other forest restoration methods. This research is urgent if we are to develop fire management strategies that reduce fire risk and maintain habitat for avifauna and other wildlife of the Rocky Mountains.

Studies in Avian Biology