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USGS2022

Supplemental habitat is reservoir dependent: Identifying optimal planting decision using Bayesian Decision Networks

Environmental management often requires making decisions despite system uncertainty. One such example is mudflat mediation in flood control reservoirs. Reservoir mudflats limit development of diverse fish assemblages due to the lack of structural habitat provided by plants. Seeding mudflats with agricultural plants may mimic floodplain wetlands once inundated and provide fish habitat and achieve habitat management objectives. However, planting success is uncertain because of unpredictable water level fluctuations that affect plant survival and growth. Decision support tools can account for uncertainty that influences decision outcomes and reduce the risk in reservoir mudflat planting decisions. We used Bayesian decision networks and sensitivity analyses to quantify uncertainty surrounding mudflat plantings as supplemental fish habitat in four northwest Mississippi reservoirs. When averaged across all uncertainty, planting was the optimal decision only in Enid Lake. Response profiles indicated planting decisions depended on elevation contours within Enid, Sardis, and Grenada reservoirs. No planting was optimal at all elevations for Arkabutla Lake. These results provide a quantified basis for establishing best management practices and identify key system states that influence decision outcomes. The process used in this study to evaluate planting decisions can be applied to any reservoir by modifying reservoir dependent inputs to evaluate planting decisions to provide supplemental fish habitat.

Mississippi↗

USGSDate not supplied

Characterizing the interface between wild ducks and poultry to evaluate the potential of transmission of avian pathogens

Background Characterizing the interface between wild and domestic animal populations is increasingly recognized as essential in the context of emerging infectious diseases (EIDs) that are transmitted by wildlife. More specifically, the spatial and temporal distribution of contact rates between wild and domestic hosts is a key parameter for modeling EIDs transmission dynamics. We integrated satellite telemetry, remote sensing and ground-based surveys to evaluate the spatio-temporal dynamics of indirect contacts between wild and domestic birds to estimate the risk that avian pathogens such as avian influenza and Newcastle viruses will be transmitted between wildlife to poultry. We monitored comb ducks ( Sarkidiornis melanotos melanotos ) with satellite transmitters for seven months in an extensive Afro-tropical wetland (the Inner Niger Delta) in Mali and characterise the spatial distribution of backyard poultry in villages. We modelled the spatial distribution of wild ducks using 250-meter spatial resolution and 8-days temporal resolution remotely-sensed environmental indicators based on a Maxent niche modelling method. Results Our results show a strong seasonal variation in potential contact rate between wild ducks and poultry. We found that the exposure of poultry to wild birds was greatest at the end of the dry season and the beginning of the rainy season, when comb ducks disperse from natural water bodies to irrigated areas near villages. Conclusions Our study provides at a local scale a quantitative evidence of the seasonal variability of contact rate between wild and domestic bird populations. It illustrates a GIS-based methodology for estimating epidemiological contact rates at the wildlife and livestock interface integrating high-resolution satellite telemetry and remote sensing data.

Inner Niger Delta↗

USGS2020

Impacts of sea-level rise on the tidal reach of California coastal rivers using the Coastal Storm Modeling System (CoSMoS)

In coastal rivers, the interactions between tides and fluvial discharge affect local ecology, sedimentation, river dynamics, river mouth configuration, and the flooding potential in adjacent wetlands and low-lying areas. With sea-level rise, the tidal reach within coastal rivers can expand upstream, impacting river dynamics and increasing flood risk across a much greater area. Rivers along the Pacific coast of California are constrained by coastal mountain ranges, in contrast to the typical large and low-gradient river deltas and estuaries often used in tidal reach studies. Yet, the impacts of tides are ever-present and considerable to these rivers' habitats and neighboring communities. The impacts of a range of sea-level rise, discharge, and coastal storm conditions on the upstream extent of a spring tidal influence and the associated flood potential are assessed for several coastal rivers across California using coupled Delft3D FLOW-WAVE hydrodynamic simulations that explicitly account for the interactions between waves, currents, surge, and water levels in this study. Projected changes in tidal reach among the various rivers are characterized and implications for adjacent communities and stakeholders are discussed.

California↗

USGS1976

Feeding ecology of breeding gadwalls on saline wetlands

The feeding ecology of breeding gadwalls ( Anas strepera ) from saline wetlands in North Dakota was examined in relation to sex, pair mates, reproductive status, food availability, and wetland type during the spring and summer of 1971 and 1972. Esophagi of males and females contained 40.4 and 48.2 percent animal food, respectively, between 17 April and 25 August. Animal foods consumed by paired females varied with reproductive condition and were independent of their mates. Invertebrates increased from 47.7 i?? 17.4 percent in the diet during prelaying to 72.0 i?? 18.4 percent during laying and declined to 46.3 i?? 30.0 percent during postlaying. Aquatic insects dominated the diet during egg-laying and were selected disproportionately relative to their availability. Esophageal contents indicated that diversity of plant and animal foods in the diet varied inversely with specific conductance. Major factors influencing food selection of the breeding birds are discussed as interactions among their physiological status, their anatomical and behavioral characteristics, and the abundance and behavior of food organisms as influenced by chemical and physical features of the environment. The data suggested that these interrelated ecological factors act simultaneously to control the phenology of events and determine the foods utilized.

North Dakota↗

USGS2005

The Circumpolar Arctic vegetation map

Question: What are the major vegetation units in the Arctic, what is their composition, and how are they distributed among major bioclimate subzones and countries? Location: The Arctic tundra region, north of the tree line. Methods: A photo-interpretive approach was used to delineate the vegetation onto an Advanced Very High Resolution Radiometer (AVHRR) base image. Mapping experts within nine Arctic regions prepared draft maps using geographic information technology (ArcInfo) of their portion of the Arctic, and these were later synthesized to make the final map. Area analysis of the map was done according to bioclimate subzones, and country. The integrated mapping procedures resulted in other maps of vegetation, topography, soils, landscapes, lake cover, substrate pH, and above-ground biomass. Results: The final map was published at 1:7 500 000 scale map. Within the Arctic (total area = 7.11 x 106 km 2), about 5.05 ?? 106 km2 is vegetated. The remainder is ice covered. The map legend generally portrays the zonal vegetation within each map polygon. About 26% of the vegetated area is erect shrublands, 18% peaty graminoid tundras, 13% mountain complexes, 12% barrens, 11% mineral graminoid tundras, 11% prostrate-shrub tundras, and 7% wetlands. Canada has by far the most terrain in the High Arctic mostly associated with abundant barren types and prostrate dwarf-shrub tundra, whereas Russia has the largest area in the Low Arctic, predominantly low-shrub tundra. Conclusions: The CAVM is the first vegetation map of an entire global biome at a comparable resolution. The consistent treatment of the vegetation across the circumpolar Arctic, abundant ancillary material, and digital database should promote the application to numerous land-use, and climate-change applications and will make updating the map relatively easy. ?? IAVS; Opulus Press.

Journal of Vegetation Science↗

USGS1996

Patch occupancy and dispersal of spruce grouse on the edge of its range in Maine

We surveyed 18 habitat patches (black spruce (Picea marinana) - tamarack (Larix larcina) wetlands) for spruce grouse (Dendragapus canadensis canadensis) on Mount Desert Island, Maine, during April-May in 1992 and 1993 to determine patch occupancy relative to patch area. We also equipped nine juvenile grouse with radio transmitters to determine movement and habitat use outside of patches during autumn dispersal. The 2 large patches (77 and 269 ha), 5 of 6 medium-sized (11-26 ha) patches, and 1 of 10 small (4-8 ha) patches were occupied. Spruce grouse occupied smaller habitat patches than previously reported, and occupied patches were closer (P < 0.05) to the nearest occupied patch (x = 1.2 km) than were unoccupied patches (x = 2.5 km). Eight of nine juvenile grouse left their natal habitat patch during autumn dispersal, and net dispersal distance (x = 2.3 km) was greater than that reported for grouse in areas with more contiguous habitat. Dispersing juveniles used all major forest types and 33 % of relocations were in deciduous forest. Thus, deciduous forest was not an absolute dispersal barrier.

Maine↗

USGS2016

Active season microhabitat and vegetation selection by giant gartersnakes associated with a restored marsh in California

Studies of habitat selection can reveal important patterns to guide habitat restoration and management for species of conservation concern. Giant gartersnakes Thamnophis gigas are endemic to the Central Valley of California, where >90% of their historical wetland habitat has been converted to agricultural and other uses. Information about the selection of habitats by individual giant gartersnakes would guide habitat restoration by indicating which habitat features and vegetation types are likely to be selected by these rare snakes. We examined activity patterns and selection of microhabitats and vegetation types by adult female giant gartersnakes with radiotelemetry at a site composed of rice agriculture and restored wetlands using a paired case-control study design. Adult female giant gartersnakes were 14.7 (95% credible interval [CRI] = 9.4–23.7) times more likely to be active (foraging, mating, or moving) when located in aquatic habitats than when located in terrestrial habitats. Microhabitats associated with cover—particularly emergent vegetation, terrestrial vegetation, and litter—were positively selected by giant gartersnakes. Individual giant gartersnakes varied greatly in their selection of rice and rock habitats, but varied little in their selection of open water. Tules Schoenoplectus acutus were the most strongly selected vegetation type, and duckweed Lemna spp., water-primrose Ludwigia spp., forbs, and grasses also were positively selected at the levels of availability observed at our study site. Management practices that promote the interface of water with emergent aquatic and herbaceous terrestrial vegetation will likely benefit giant gartersnakes. Given their strong selection of tules, restoration of native tule marshes will likely provide the greatest benefit to these threatened aquatic snakes.

California↗

USGS2000

Contrasting patterns of habitat use by prawns and crayfish in a headwater marsh of the St. Johns River, Florida

We compared seasonal patterns of habitat use by the prawn Palaemonetes paludosus and the crayfish Procambarus alleni in Blue Cypress Marsh Conservation Area, Florida. Prawn densities were similar to those found in other oligotrophic wetlands of southern Florida, whereas crayfish densities were much greater than reported previously for other wetlands in the area. Prawns and crayfish had strikingly different patterns of habitat use. Prawn density and biomass were similar in wet prairies and sloughs, whereas crayfish density and biomass were significantly higher in wet prairies. Within habitats, the abundance of prawns and crayfish generally increased with increasing structural complexity and the abundance of crayfish generally decreased with increasing water depth. Differences in risk of predation, frequency of agonistic encounters, food availability, and other factors likely contributed to observed patterns of habitat use. Because of differences in their ability to burrow and avoid concentration into dry-season refugia, prawns and crayfish responded very differently to seasonal variation in hydrologic conditions. Prawn densities were initially low (following a severe drought) and then increased during much of the study period, whereas crayfish densities were relatively stable throughout the study period. Overall, it appears that prawns are more responsive to antecedent hydrologic conditions and crayfish are more responsive to the availability of suitable habitats such as wet prairies.

Florida↗

USGS2006

Effects of long-term water table drawdown on evapotranspiration and vegetation in an arid region phreatophyte community

Evapotranspiration rates and the ground water component of evapotranspiration at a site in Colorado's San Luis Valley that is dominated by shrubby phreatophytes (greasewood and rabbitbrush) were compared before and after a water table drawdown. Evapotranspiration (ET) rates at the site were first measured in 1985-1987 (pre-drawdown) when the mean water table depth was 0.92 m. Regional ground water pumping has since lowered the water table by 1.58 m, to a mean of 2.50 m. We measured ET at the same site in 1999-2003 (post-drawdown), and assessed physical and biological factors affecting the response of ET to water table drawdown. Vegetation changed markedly from the pre-drawdown to the post-drawdown period as phreatophytic shrubs invaded former wetland areas, and wetland grasses and grass-like species decreased. Lowering the water table reduced estimated total annual ET from a mean of 409.0 to 278.0 mm, a decrease of 32%, and the ground water component of ET (ETg), from a mean of 226.6 to 86.5 mm, a decrease of 62%. Two water table depth/ET models that have been used in the San Luis Valley overestimated the reduction in ETg due to lowering the water table by as much as 253%. While our results corroborate the generally observed negative correlation between ET rates and water table depth, they demonstrate that specific models to estimate ET as a function of water table depth, if not verified, may be prone to large errors. Both the water table drawdown and the vegetation change are continuing 20 years after the drawdown began, and it is unclear how site ET rates and processes will differ after the water table has stabilized and vegetation has adjusted to the new site hydrologic conditions. ?? 2005 Elsevier B.V. All rights reserved.

Journal of Hydrology↗

USGS1997

Shorebird-prey interactions in South Carolina coastal soft-sediments

We investigated the simultaneous influence of benthic prey (primarily insect larvae, oligochaetes, and polychaetes) on spring-migrating shorebirds (Charadriiformes) and shorebirds on prey in brackish managed wetlands of South Carolina. We proposed that positive correlations between shorebird and prey densities and between prey reduction and shorebird density might result in a negative feedback loop. The loop would be characterized by shorebird redistribution over time and equalization of shorebird and prey densities (and biomass) across the site. In support of the feedback loop ( i ) there were positive correlations between shorebird and prey densities (and biomass) early in migration; ( ii ) shorebird predation was responsible for declines of 49% in prey density and 50% in prey biomass in a shorebird exclosure experiment, with shorebird density positively correlated with prey decline in open plots; ( iii ) there was equalization of prey biomass across the site, and relative prey species abundance appeared to become more equal. Contrary to predictions, shorebirds did not redistribute after prey reduction, and patchiness of shorebird and prey densities persisted across the site. This failure was attributed to high prey density, even at the season's end, and high water depths. There were no confounding indirect trophic-level effects.

South Carolina↗

USGS2014

Natural uranium and strontium isotope tracers of water sources and surface water-groundwater interactions in arid wetlands: Pahranagat Valley, Nevada, USA

Near-surface physical and chemical process can strongly affect dissolved-ion concentrations and stable isotope compositions of water in wetland settings, especially under arid climate conditions. In contrast, heavy radiogenic isotopes of strontium ( 87 Sr/ 86 Sr) and uranium ( 234 U/ 238 U) remain largely unaffected and can be used to help identify unique signatures from different sources and quantify end-member mixing that would otherwise be difficult to determine. The utility of combined Sr and U isotopes are demonstrated in this study of wetland habitats on the Pahranagat National Wildlife Refuge, which depend on supply from large-volume springs north of the Refuge, and from small-volume springs and seeps within the Refuge. Water budgets from these sources have not been quantified previously. Evaporation, transpiration, seasonally variable surface flow, and water management practices complicate the use of conventional methods for determining source contributions and mixing relations. In contrast, 87 Sr/ 86 Sr and 234 U/ 238 U remain unfractionated under these conditions, and compositions at a given site remain constant. Differences in Sr- and U-isotopic signatures between individual sites can be related by simple two- or three-component mixing models. Results indicate that surface flow constituting the Refuge’s irrigation source consists of a 65:25:10 mixture of water from two distinct regionally sourced carbonate aquifer springs, and groundwater from locally sourced volcanic aquifers. Within the Refuge, contributions from the irrigation source and local groundwater are readily determined and depend on proximity to those sources as well as water management practices.

Nevada↗

USGS1997

Woody debris decomposition in the Atchafalaya River Basin of Louisiana following hurricane disturbance

The contribution of woody debris to some biogeochemical functions of forested wetlands was examined in the Atchafalaya River Basin in Louisiana following disturbance by Hurricane Andrew. Woody debris decomposition processes were characterized in terms of mass, C, N, and P dynamics. These were compared between different diameters of debris, areas recieving different intensities of disturbance, and between different positions relative to the soil. Disturbance intensity (as defined by canopy closure) had little effect on decomposition processes when compared with soil orientation (i.e., whether in contact with or suspended above the soil). Rates of mass loss varied between 0.055 and 0.068 for suspended and ground-contact coarse woody debris, respectively. Fine woody debris rate coefficients averaged 0.060 and 0.085 for the same respective orientations. In general, woody debris displayed strong source activity for P but a greater tendency toward sink behavior for N. In terms of biogeochemical transformations, these data suggest that woody debris might act as a phosphate source during sheet flow events but could provide short-term retention of inorganic N associated with floodwaters.

Louisiana↗

USGS2006

Characterization of a microbial consortium capable of rapid and simultaneous dechlorination of 1,1,2,2-tetrachloroethane and chlorinated ethane and ethene intermediates:

Mixed cultures capable of dechlorinating chlorinated ethanes and ethenes were enriched from contaminated wetland sediment at Aberdeen Proving Ground (APG) Maryland. The “West Branch Consortium” (WBC-2) was capable of degrading 1,1,2,2-tetrachloroethane (TeCA), trichloroethene (TCE), cis and trans 1,2-dichloroethene (DCE), 1,1,2-trichloroethane (TCA), 1,2-dichloroethane, and vinyl chloride to nonchlorinated end products ethene and ethane. WBC-2 dechlorinated TeCA, TCA, and cis DCE rapidly and simultaneously. A Clostridium sp. phylogenetically closely related to an uncultured member of a TCE-degrading consortium was numerically dominant in the WBC-2 clone library after 11 months of enrichment in culture. Clostridiales, including Acetobacteria, comprised 65% of the bacterial clones in WBC-2, with Bacteroides (14%), and epsilon Proteobacteria (14%) also numerically important. Methanogens identified in the consortium were members of the class Methanomicrobia, which includes acetoclastic methanogens. Dehalococcoides did not become dominant in the culture, although it was present at about 1% in the microbial population. The WBC-2 consortium provides opportunities for the in situ bioremediation of sites contaminated with mixtures of chlorinated ethenes and ethanes.

Bioremediation Journal↗

USGS2008

Maximizing detection probability of Wetland-dependent birds during point-count surveys in northwestern Florida

We conducted 262 call-broadcast point-count surveys (1-6 replicate surveys on each of 62 points) using standardized North American Marsh Bird Monitoring Protocols between 31 May and 7 July 2006 on St. Vincent National Wildlife Refuge, an island off the northwest coast of Florida. We conducted double-blind multiple-observer surveys, paired morning and evening surveys, and paired morning and night surveys to examine the influence of call-broadcast and time of day on detection probability. Observer detection probability for all species pooled was 75% and was similar between passive (69%) and call-broadcast (65%) periods. Detection probability was higher on morning than evening (t = 3.0, P = 0.030) or night (t = 3.4, P = 0.042) surveys when we pooled all species. Detection probability was higher (but not significant for all species) on morning compared to evening or night surveys for all five focal species detected on surveys: Least Bittern (Ixobrychus exilis), Clapper Rail (Rallus longirostris), Purple Gallinule (Porphyrula martinica), Common Moorhen (Gallinula chloropus), and American Coot (Fulica americana). We detected more Least Bitterns (t = 2.4, P = 0.064) and Common Moorhens (t = 2.8, P = 0.026) on morning than evening surveys, and more Clapper Rails (t = 5.1, P = 0.014) on morning than night surveys.

Wilson Journal of Ornithology↗

USGS2011

Survival of white-tailed deer neonates in Minnesota and South Dakota

Understanding the influence of intrinsic (e.g., age, birth mass, and sex) and habitat factors on survival of neonate white-tailed deer improves understanding of population ecology. During 2002–2004, we captured and radiocollared 78 neonates in eastern South Dakota and southwestern Minnesota, of which 16 died before 1 September. Predation accounted for 80% of mortality; the remaining 20% was attributed to starvation. Canids (coyotes [ Canis latrans ], domestic dogs) accounted for 100% of predation on neonates. We used known fate analysis in Program MARK to estimate survival rates and investigate the influence of intrinsic and habitat variables on survival. We developed 2 a priori model sets, including intrinsic variables (model set 1) and habitat variables (model set 2; forested cover, wetlands, grasslands, and croplands). For model set 1, model { S age-interval } had the lowest AIC c (Akaike's information criterion for small sample size) value, indicating that age at mortality (3-stage age-interval: 0–2 weeks, 2–8 weeks, and >8 weeks) best explained survival. Model set 2 indicated that habitat variables did not further influence survival in the study area; β-estimates and 95% confidence intervals for habitat variables in competing models encompassed zero; thus, we excluded these models from consideration. Overall survival rate using model { S age-interval } was 0.87 (95% CI = 0.83–0.91); 61% of mortalities occurred at 0–2 weeks of age, 26% at 2–8 weeks of age, and 13% at >8 weeks of age. Our results indicate that variables influencing survival may be area specific. Region-specific data are needed to determine influences of intrinsic and habitat variables on neonate survival before wildlife managers can determine which habitat management activities influence neonate populations.

Journal of Wildlife Management↗

USGS2018

Long-term changes in pond permanence, size, and salinity in Prairie Pothole Region wetlands: The role of groundwater-pond interaction

Study Region Cottonwood Lake area wetlands, North Dakota, U.S.A. Study Focus Fluctuations in pond permanence, size, and salinity are key features of prairie-pothole wetlands that provide a variety of wetland habitats for waterfowl in the northern prairie of North America. Observation of water-level and salinity fluctuations in a semi-permanent wetland pond over a 20-year period, included periods when the wetland occasionally was dry, as well as wetter years when the pond depth and surface extent doubled while volume increased 10 times. New hydrological insights for the study region Compared to all other measured budget components, groundwater flow into the pond often contributed the least water (8–28 percent) but the largest amount (>90 percent) of specific solutes to the water and solute budgets of the pond. In drier years flow from the pond into groundwater represented > 10 percent of water loss, and in 1992 was approximately equal to evapotranspiration loss. Also during the drier years, export of calcium, magnesium, sodium, potassium, chloride, and sulfate by flow from the pond to groundwater was substantial compared with previous or subsequent years, a process that would have been undetected if groundwater flux had been calculated as a net value. Independent quantification of water and solute gains and losses were essential to understand controls on water-level and salinity fluctuations in the pond in response to variable climate conditions.

Journal of Hydrology: Regional Studies↗

USGS2007

Generation and validation of characteristic spectra from EO1 Hyperion image data for detecting the occurrence of the invasive species, Chinese tallow

Chinese tallow (Triadica sebifera) is an invasive tree that is spreading throughout the south-eastern United States and now into the west, and in many places causing extensive change to native habitat and associated wildlife. Detecting and mapping the relative distribution of this species is important to its control and eradication. To map the relative distribution of Chinese tallow within a southwestern Louisiana coastal wetland to upland environment, Earth Observing 1 (EO1) satellite Hyperion sensor hyperspectral image data were combined with a subpixel extraction method that modelled characteristic spectra from the image data without requiring a priori characteristic spectra. Because of the low percentage occurrences of Chinese tallow and high spectral covariation in the environment, unique validation and verification methods were implemented, relying on simultaneous collection of field canopy reflectance spectra and subsequent classification of canopy compositions. The subpixel extraction method produced five characteristic spectra, which we further refined to four that adequately represented the field spectra, as well as the Hyperion imaged canopy reflectance datasets. Characteristic spectra were designated as senescing foliage, cypress-tupelo trees, and trees without leaves; shadows and green vegetation; senescing Chinese tallow with yellow leaves and yellowing foliage; and senescing Chinese tallow with red leaves ('red tallow'). About 81% (n=34) of the field and 78% (n=33) of the Hyperion imaged characteristic spectra associated with 'red tallow' were explained by the compositions generated in the field slide classifications. ?? 2005 US Government.

International Journal of Remote Sensing↗

USGS2008

Estimation and correction of visibility bias in aerial surveys of wintering ducks

Incomplete detection of all individuals leading to negative bias in abundance estimates is a pervasive source of error in aerial surveys of wildlife, and correcting that bias is a critical step in improving surveys. We conducted experiments using duck decoys as surrogates for live ducks to estimate bias associated with surveys of wintering ducks in Mississippi, USA. We found detection of decoy groups was related to wetland cover type (open vs. forested), group size (1?100 decoys), and interaction of these variables. Observers who detected decoy groups reported counts that averaged 78% of the decoys actually present, and this counting bias was not influenced by either covariate cited above. We integrated this sightability model into estimation procedures for our sample surveys with weight adjustments derived from probabilities of group detection (estimated by logistic regression) and count bias. To estimate variances of abundance estimates, we used bootstrap resampling of transects included in aerial surveys and data from the bias-correction experiment. When we implemented bias correction procedures on data from a field survey conducted in January 2004, we found bias-corrected estimates of abundance increased 36?42%, and associated standard errors increased 38?55%, depending on species or group estimated. We deemed our method successful for integrating correction of visibility bias in an existing sample survey design for wintering ducks in Mississippi, and we believe this procedure could be implemented in a variety of sampling problems for other locations and species.

Journal of Wildlife Management↗