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USGS2015

Variability within nearshore ecosystems of the Gulf of Alaska

Nearshore marine habitats, which represent the interface among air, land and sea, form a critical component of the Gulf of Alaska (GOA) ecosystem. As an interface, the nearshore facilitates transfer of water, nutrients and biota between terrestrial and oceanic systems, creating zones of high productivity. The nearshore provides a variety of ecosystem services, including (1) nursery grounds for a wide variety of marine invertebrates and fishes (e.g., crabs, salmon, and herring), (2) nesting and pupping habitats for many pelagic marine predators (e.g., sea bird nesting colonies and pinniped rookeries), (3) important feeding habitats for high trophic level pelagic predators (e.g., killer whales), (4) habitat for resident nearshore species (including sea otters, harbor seals, shorebirds, sea ducks, nearshore fishes, and marine invertebrates), many of which are important sources of commercial and subsistence harvests, and (5) recreational, commercial and subsistence opportunities for human populations (Figure 1-1). The canopy forming kelps and eel grass beds found in the nearshore provide primary production and structure to nursery habitats, and also can dissipate wave energy thus reducing coastal erosion, and serve as a carbon “sink” capable of storing substantial amounts of atmospheric CO 2 (Wilmers et al. 2012).

Report↗

USGS2021

Characterization of halogenated organic compounds in pelagic sharks and sea turtles using a nontargeted approach

Halogenated organic compounds (HOCs) in marine species collected from the Atlantic Ocean [3 shortfin mako ( Isurus oxyrinchus ) and 1 porbeagle ( Lamna nasus )], and 12 sea turtles collected from the Pacific Ocean [3 loggerhead ( Caretta caretta ), 3 green ( Chelonia mydas ), 3 olive ridley ( Lepidochelys olivacea ), and 3 hawksbill ( Eretmochelys imbricata )] were analyzed with a nontargeted analytical method using two-dimensional gas chromatography coupled to high-resolution time-of-flight mass spectrometry. Sharks and sea turtles had distinct HOC profiles. Halogenated methoxyphenols (halo-MeOPs) were the most abundant compound class identified in sea turtle livers, while polychlorinated biphenyls (PCBs) were the most abundant in shark livers. In addition to legacy contaminants and halo-MeOPs, a total of 110 nontargeted/novel HOCs (NHOCs) were observed in the shark livers. Shortfin mako collected from the northern Gulf of Mexico contained the largest number (89) and most diverse structural classes of NHOCs. Among all NHOCs, a group of compounds with the elemental composition C 14 H 12– n Cl n ( n = 5–8) exhibited the highest concentrations, followed by chlorocarbazoles and tris(chlorophenyl) methanes (TCPMs). Using nontargeted workflows, a variety of known and unknown HOCs were observed, which demonstrate the need to develop more complete chemical profiles in the marine environment.

Environmental Science & Technology↗

USGS2009

Environmental forcing on life history strategies: Evidence for multi-trophic level responses at ocean basin scales

Variation in life history traits of organisms is thought to reflect adaptations to environmental forcing occurring from bottom-up and top-down processes. Such variation occurs not only among, but also within species, indicating demographic plasticity in response to environmental conditions. From a broad literature review, we present evidence for ocean basin- and large marine ecosystem-scale variation in intra-specific life history traits, with similar responses occurring among trophic levels from relatively short-lived secondary producers to very long-lived apex predators. Between North Atlantic and North Pacific Ocean basins, for example, species in the Eastern Pacific exhibited either later maturation, lower fecundity, and/or greater annual survival than conspecifics in the Western Atlantic. Parallel variations in life histories among trophic levels also occur in adjacent seas and between eastern vs. western ocean boundaries. For example, zooplankton and seabird species in cooler Barents Sea waters exhibit lower fecundity or greater annual survival than conspecifics in the Northeast Atlantic. Sea turtles exhibit a larger size and a greater reproductive output in the Western Pacific vs. Eastern Pacific. These examples provide evidence for food-web-wide modifications in life history strategies in response to environmental forcing. We hypothesize that such dichotomies result from frequency and amplitude shifts in resource availability over varying temporal and spatial scales. We review data that supports three primary mechanisms by which environmental forcing affects life history strategies: (1) food-web structure; (2) climate variability affecting the quantity and seasonality of primary productivity; (3) bottom-up vs. top-down forcing. These proposed mechanisms provide a framework for comparisons of ecosystem function among oceanic regions (or regimes) and are essential in modeling ecosystem response to climate change, as well as for creating dynamic ecosystem-based marine conservation strategies.

Progress in Oceanography↗

USGS1941

Geologic structure and occurrence of gas in part of southwestern New York

The area covered by this report is in southwestern New York and includes a little more than 3,000 square miles in Steuben and Yates counties and parts of the six adjacent counties. This area has been mapped to determine the structural attitude of the exposed rocks, so as to aid those interested in prospecting for natural gas in the Oriskany sandstone of Lower Devonian age. Because of the gentle regional dip toward the southwest, the youngest beds are exposed in the southwest corner of the area, and progressively older beds crop out northeastward in successive bands that strike generally northwest. All the exposed rocks are of Upper Devonian age except those in a narrow belt at the extreme north edge of the area, where a small thickness of Middle Devonian rocks crops out. The maximum thickness of beds so exposed is nearly 4,000 feet, of which the lower part is predominantly soft dark shale and the upper part predominantly fine-grained sandstone and gray shale. All the beds are marine except a few tongues of continental deposits—red shale and sandstone and gray mudstone—in the youngest beds. All the beds thicken southeastward, so that there is a northwestward convergence between any two lithologic units in the series. More than 30 key horizons that are persistent and distinctive were mapped, and altitudes on these key horizons served as a basis for constructing the structure contour map. Many of the key horizons are formation or member boundaries, but others are the tops or bottoms of limestone or sandstone beds within formations. All the stratigraphic units mapped are purely lithologic. (See pl. 2.) The Tully limestone, which crops out along the northern border of the area, is an easily recognizable and therefore valuable key bed for subsurface correlations in this part of the State. Below the Tully limestone is a thick body of Middle Devonian shales of the Hamilton group which rests on another valuable key bed, the hard, cherty Onondaga limestone, also of Middle Devonian age. Below the Onondaga limestone is the Lower Devonian Oriskany sandstone, which is the gas-producing bed. Unlike the Onondaga, the Oriskany is locally thin or absent. The structure of most of the area is shown by contour lines at 25-foot intervals, but, where key horizons are lacking the structure is indicated by dip symbols. Upon the regional south and southwest dip are superposed numerous gentle folds whose axes trend approximately northeastward in the greater part of the area but more nearly eastward in the eastern part. The folds generally tend to become narrower and steeper, and therefore more closely spaced, southwestward. Many of the anticlines fork southwestward, whereas the synclines tend to fork northeastward. All the folds have a westward or southwestward plunge. Throughout the area the rocks are jointed in two dominant sets—one that trends northwest and the other east or northeast. No evident relation between these joints, which were measured only in the hard, relatively brittle beds, and the individual folds or domes was discernible. The faults are concentrated in the northeastern and southwestern parts of the area and trend either northeastward or northwestward. Some are nearly vertical normal faults ; others are steep reverse faults. Subsurface data show that most of the faults increase in throw downward and also that many subsurface faults do not reach the surface. A group of faults in the northwestern part of the Greenwood quadrangle and the southwestern part of the Hornell quadrangle were active during Upper Devonian time, while the Gowanda shale and overlying beds were being deposited. At this stratigraphic horizon the beds in a zone a few hundred feet thick are highly deformed in a wide belt on both sides of the faults. Sandstone layers are thinned out into long stringers or swollen into thick masses and in places are bent acutely without fracture. Thin layers of shale, coquina, and sand have flowed together into intricately plicated zones that lack cleavage and joints. These features show that the sediments were deformed while wet and plastic and buried only a little way below the sea floor. The beds that were laid down over these disturbed zones were not involved in this deformation. Many of the sharper flexures and most of the faults are not evident in the beds several hundred feet stratigraphically higher. Accordingly, broad, gentle folds in these higher beds in parts of the area south and west of the northwest corner of the Greenwood quadrangle may conceal, at considerable depths below them, narrow folds separated by abrupt flexures or faults. Several of the larger streams and rivers occupy strike valleys, and their courses swing to follow the changing strike of the rocks where they cross successive folds. But, with few exceptions, the small streams are not adjusted to the bedrock structure. Domes likely to serve as traps for natural gas are concentrated in the northeastern and southwestern parts of the area. The Wayne-Dundee gas field is in the northeastern part. All the other potentially valuable domes in this part of the area have been drilled and found valueless except one small structural feature in the southern part of the Ovid quadrangle, which, if the Oriskany is present, may trap a small quantity of gas. In the Greenwood quadrangle in the southwestern part of the area there is one gas field and four well-defined domes, all of which may be productive if the Oriskany sandstone is present. In the northwest corner of the quadrangle the dips indicate at least two domes that can be adequately defined and evaluated only by geophysical prospecting. The State Line gas field is in the Wellsville quadrangle. In the southeast corner of this quadrangle there are three other domes of comparable size that may also be productive if underlain by the Oriskany sandstone. At other places in the Wellsville quadrangle the dips suggest several anticlinal axes on which analogous productive domes may be found. The structural features in this quadrangle, however, are defined by contours only in the southeastern part. In the Woodhull quadrangle a large dome east of Jasper may be productive, and the western top of the large Wood-hull dome in the southwestern part of the quadrangle seems to warrant drilling, despite the absence of the Oriskany in a well on the eastern top. Two wells drilled in 1936 and 1937 a little northeast of a broad, nearly flat-topped dome in the Hornell quadrangle, a few miles east of Hornell, struck small flows of gas, suggesting that wells drilled higher on this dome may be productive. In much of the southwestern part of the area seismograph surveys should be of great value in determining the structure at the Tully and Onondaga horizons. Without abundant subsurface control of this sort, the danger of drilling into subsurface faults can hardly be overemphasized. Three closed or nearly closed synclines in the Greenwood and Wellsville quadrangles appear to be favorable places to drill for oil in the shallow sands— presumably parts of the Dunkirk sandstone.

New York↗

USGS1941

Geologic structure and occurrence of gas in part of southwestern New York. Part 1, Structure and gas possibilities of the Oriskany sandstone in Steuben, Yates, and parts of the adjacent counties

The area covered by this report is in southwestern New York and includes a little more than 3,000 square miles in Steuben and Yates counties and parts of the six adjacent counties. This area has been mapped to determine the structural attitude of the exposed rocks, so as to aid those interested in prospecting for natural gas in the Oriskany sandstone of Lower Devonian age. Because of the gentle regional dip toward the southwest, the youngest beds are exposed in the southwest corner of the area, and progressively older beds crop out northeastward in successive bands that strike generally northwest. All the exposed rocks are of Upper Devonian age except those in a narrow belt at the extreme north edge of the area, where a small thickness of Middle Devonian rocks crops out. The maximum thickness of beds so exposed is nearly 4,000 feet, of which the lower part is predominantly soft dark shale and the upper part predominantly fine-grained sandstone and gray shale. All the beds are marine except a few tongues of continental deposits red shale and sandstone and gray mudstone in the youngest beds. All the beds thicken southeastward, so that there is a northwestward convergence between any two lithologic units in the series. More than 30 key horizons that are persistent and distinctive were mapped, and altitudes on these key horizons served as a basis for constructing the structure contour map. Many of the key horizons are formation or member boundaries, but others are the tops or bottoms of limestone or sandstone beds within formations. All the stratigraphic units mapped are purely lithologic. (See pi. 2.) The Tully limestone, which crops out along the northern border of the area, is an easily recognizable and therefore valuable key bed for subsurface correlations in this part of the State. Below the Tully limestone is a thick body of Middle Devonian shales of the Hamilton group which rests on another valuable key bed, the hard, cherty Onondaga limestone, also of Middle Devonian age. Below the Onondaga limestone is the Lower Devonian Oriskany sandstone, which is the gas-producing bed. Unlike the Onondaga, the Oriskany is locally thin or absent. The structure of most of the area is shown by contour lines at 25-foot intervals, but where key horizons are lacking the structure is indicated by dip symbols. Upon the regional south and southwest dip are superposed numerous gentle folds whose axes trend approximately northeastward in the greater part of the area but more nearly eastward in the eastern part. The folds generally tend to become narrower and steeper, and therefore more closely spaced, southwestward. Many of the anticlines fork southwestward, whereas the synclines. tend to fork northeastward. All the folds have a westward or southwestward plunge. Throughout the area the rocks are jointed in two dominant sets one that trends northwest and the other east or northeast. No evident relation .between these joints, which were measured only in the hard, relatively brittle beds, and the individual folds or domes was discernible. The faults are concentrated in the northeastern and southwestern parts of the area and trend either northeastward or northwestward. Some are nearly vertical normal faults; others are steep reverse faults. Subsurface data show that most of the faults increase in throw downward and also that many subsurface faults do not reach the surface. A group of faults in the northwestern part of the Greenwood quadrangle and the southwestern part of the Hornell quadrangle were active during Upper Devonian time, while the Gowanda shale and overlying beds were being deposited. At this stratigraphic horizon the beds in a zone a few hundred feet thick are highly deformed in a wide belt on both sides of the faults. Sandstone layers are thinned out into long stringers or swollen into thick masses and in places are bent acutely without fracture. Thin layers of shale, coquina, and sand have flowed together into intricately plicated zones that lack cleavage and joints. These features show that the sediments were deformed while wet and plastic and buried only a little way below the sea floor. The beds that were laid down over these disturbed zones were not involved in this deformation. Many of the sharper flexures and most of the faults are not evident in the beds several hundred feet stratigraphically higher. Accordingly, broad, gentle folds in these higher beds in parts of the area south and west of the northwest corner of the Greenwood quadrangle may conceal, at considerable depths below them, narrow folds separated by abrupt flexures or faults. Several of the larger streams and rivers occupy strike valleys, and their j courses swing to follow the changing strike of the rocks where they cross ( successive folds. But, with few exceptions, the small streams are not adjusted to the bedrock structure. Domes likely to serve as traps for natural gas are concentrated in the northeastern and southwestern parts of the area. The Wayne-Dundee gas field is in the northeastern part. All the other potentially valuable domes in this part of the area have been drilled and found valueless except one small structural feature in the southern part of the Ovid quadrangle, which, if the Oriskany is present, may trap a small quantity of gas. In the Greenwood quadrangle in the southwestern part of the area there is one gas field and four well-defined domes, all of which may be productive if the Oriskany sandstone is present. In the northwest corner of the quadrangle the dips indicate at least two domes that can be adequately defined and evaluated only by geophysical prospecting. The State Line gas field is in tbe Wellsville quadrangle. In the southeast corner of this quadrangle there are three other domes of comparable size that may also be productive if underlain by the Oriskany sandstone. At other places in the Wellsville quadrangle the dips suggest several anticlinal axes on which analogous productive domes maybe found. The structural features in this quadrangle, however, are defined by contours only in the southeastern part. In the Woodhull quadrangle a large dome east of Jasper may be productive, and the western top of the large Woodhull dome in the southwestern part of the quadrangle seems to warrant drilling, despite the absence of the Oriskany in a well on the eastern top. Two wells drilled in 1936 and 1937 a little northeast of a broad, nearly flat-topped dome in the Hornell quadrangle, a few miles east of Hornell,, struck small flows of gas, suggesting that wells drilled higher on this dome may be productive. In much of the southwestern part of the area seismograph surveys should be of great value in determining the structure at the Tully and Onondaga horizons. Without abundant subsurface control of this sort, the danger of drilling into subsurface faults can hardly be overemphasized. Three closed or nearly closed synclines in the Greenwood and Wellsville quadrangles appear to be favorable places to drill for oil in the shallow sands presumably parts of the Dunkirk sandstone.

New York↗

USGS1996

Mechanism of molybdenum removal from the sea and its concentration in black shales: EXAFS evidence

Molybdenum K-edge EXAFS (extended X-ray absorption fine structure) spectra yield new structural information about the chemical environment of Mo in high-Mo black shales and sediments. Two spectral types are found. The less common one, associated with Mo ores developed in shale in China, is that of a MoS2 phase, possibly X-ray amorphous jordisite. The other, associated with Cretaceous deep sea sediments and with other black shales, is characterized by short Mo-O distances (1.69-1.71 A??), by Mo-S distances of 2.30-2.38 A??, and in some cases by second shell Mo and Fe interactions, which suggests that some Mo resides in transition metal-rich phases. EXAFS spectra of synthetic amorphous materials, prepared by scavenging Mo from HS solutions with Fe(II), FeOOH, and humic acid, suggest that the second spectral type arises from Mo present chiefly in two forms. One is a compact, Mo-Fe-S "cubane" type compound with Mo-S distances of ???2.36 A?? and Mo-Fe distances of ???2.66 A??, while the other is probably an organic form containing some Mo-O double bonds (???1.69 A??). Laboratory products, that were prepared by scavenging dissolved Mo from sulfidic solutions with humic acid, yield spectra quite similar to the second spectral type observed in shales and sediments, including unexpected indications of Mo-Fe interactions. Molybdenum L-edge spectra indicate that the mean oxidation state in the sediments and shales lies between IV and VI. This work demonstrates the merit of EXAFS for obtaining structural information on natural materials containing X-ray amorphous components which defeat conventional mineralogical characterization. The implications of these findings regarding Mo scavenging from sulfidic natural waters are considered. We introduce the concept of a geochemical switch, in which HS- transforms the marine behavior of Mo from that of a conservative element to that of a particle reactive element. The action point of the HS- switch is calculated to be, aHS- = 10-3.6 - 10-4.3. When aHS- approaches the action point, Mo becomes reactive to particles containing transition metals (e.g., Fe). We conjecture that thiols, including humic-bound thiol groups, also switch Mo behavior. In contrast to previous ideas, our model for Mo scavenging deemphasizes the role of reduction from Mo(VI) to Mo(V) as the initial step in scavenging; instead, we emphasize the ease with which Mo forms covalent bonds to transition metals and organic molecules via S bridges.

Geochimica et Cosmochimica Acta↗

USGS1994

Seismic images of a tectonic subdivision of the Greenville Orogen beneath lakes Ontario and Erie

New seismic data from marine air-gun and Vibroseis profiles in Lake Ontario and Lake Erie provide images of subhorizontal Phanerozoic sediments underlain by a remarkable series of easterly dipping reflections that extends from the crystalline basement to the lower crust. These reflections are interpreted as structural features of crustal-scale subdivisions within the Grenville Orogen. Broadly deformed, imbricated, and overlapping thrust sheets within the western Central Metasedimentary Belt are succeeded to the west by a complex zone of easterly dipping, apparent thrust faults that are interpreted as a southwest subsurface extension of the boundary zone between the Central Metasedimentary Belt and the Central Gneiss Belt. The interpreted Central Metasedimentary Belt boundary zone has a characteristic magnetic anomaly that provides a link from the adjacent ends of lakes Ontario and Erie to structures exposed 150&ensp;km to the north. Less reflective, west-dipping events are interpreted as structures within the eastern Central Gneiss Belt. The seismic interpretation augments current tectonic models that suggest the exposed ductile structures formed at depth as a result of crustal shortening along northwest-verging thrust faults. Relatively shallow reflections across the boundary region suggest local, Late Proterozoic extensional troughs containing post-Grenville sediments, preserved possibly as a result of pre-Paleozoic reactivation of basement structures.

Lake Erie, Lake Ontario↗

USGS2016

Environmental controls on spatial patterns in the long-term persistence of giant kelp in central California

As marine management is moving towards the practice of protecting static areas, it is 44 important to make sure protected areas capture and protect persistent populations. Rocky reefs in 45 many temperate areas worldwide serve as habitat for canopy forming macroalgae and these 46 structure forming species of kelps (order Laminariales) often serve as important habitat for a great 47 diversity of species. Macrocystis pyrifera is the most common canopy forming kelp species found 48 along the coast of California but the distribution and abundance of M. pyrifera varies in space and 49 time. The purpose of this study is to determine what environmental parameters are correlated with 50 the spatial and temporal persistence of M. pyrifera along the central coast of California and how 51 well those environmental parameters can be used to predict areas where M. pyrifera is more likely 52 to persist. Nine environmental variables considered in this study included depth of the seafloor, 53 structure of the rocky reef, proportion of rocky reef, size of kelp patch, biomass of kelp within a 54 patch, distance from the edge of a kelp patch, sea surface temperature, wave orbital velocities, and 55 population connectivity of individual kelp patches. Using a generalized linear mixed effects model 56 (GLMM), the persistence of M. pyrifera was significantly associated with seven of the nine 57 variables considered: depth, complexity of the rocky reef, proportion of rock, patch biomass, 58 distance from the edge of a patch, population connectivity, and wave-orbital velocities. These 59 seven environmental variables were then used to predict the persistence of kelp across the central 60 coast and these predictions were compared to a reserved dataset of M. pyrifera persistence, which 61 was not used in the creation of the GLMM. The environmental variables were shown to accurately 62 predict the persistence of M. pyrifera within the central coast of California (r = 0.71, P<0.001). 63 Because persistence of giant kelp is important to the community structure of kelp forests, 64 understanding those factors that support persistent populations of M. pyrifera will enable more 65 effective management of these ecosystems.

California↗

USGS1988

Genetic variability in the Florida manatee ( Trichechus manatus )

Tissue was obtained from 59 manatee ( Trichechus manatus ) carcasses salvaged from 20 counties in Florida. Allozyme phenotypes at 24 structural loci were determined by gel electrophoresis. Averages for the proportion of polymorphic loci and mean heterozygosity were 0.300 (range, 0.167-0.417) and 0.050 (range, 0.028-0.063), respectively. These estimates are equivalent to or higher than those generally reported for other species of marine mammals and do not support the hypothesis that body size and heterozygosity in mammals are related inversely. Among-region gene diversity accounted for only 4% of the total diversity. High rates of gene flow probably account for genetic homogeneity across regions. An F-statistic analysis revealed a general tendency toward excess homozygosity within regions. Management efforts to prevent future reductions in population size that would erode existing genic diversity should continue.

Journal of Mammalogy↗

USGS2008

Geologic resource evaluation of Kaloko-Honokohau National Historical Park, Hawai'i: Geology and coastal landforms

Geologic resource inventories of lands managed by the National Park Service (NPS) are important products for the parks and are designed to provide scientific information to better manage park resources. Park-specific geologic reports are used to identify geologic features and processes that are relevant to park ecosystems, evaluate the impact of human activities on geologic features and processes, identify geologic research and monitoring needs, and enhance opportunities for education and interpretation. These geologic reports are planned to provide a brief geologic history of the park and address specific geologic issues that link the park geology and the resource manager. The Kona coast National Parks of the Island of Hawai'i are intended to preserve the natural beauty of the Kona coast and protect significant ancient structures and artifacts of the native Hawaiians. Pu'ukohola Heiau National Historic Site (PUHE), Kaloko-Honokohau National Historical Park (KAHO), and Pu'uhonua O Honaunau National Historical Park (PUHO) are three Kona parks studied by the U.S. Geological Survey (USGS) Coastal and Marine Geology Team in cooperation with the National Park Service. This report is one of six related reports designed to provide geologic and benthic-habitat information for the three Kona parks. Each geology and coastal-landform report describes the regional geologic setting of the Hawaiian Islands, gives a general description of the geology of the Kona coast, and presents the geologic setting and issues for one of the parks. The related benthic-habitat mapping reports discuss the marine data and habitat classification scheme, and present results of the mapping program. Kaloko-Honokohau National Historical Park (KAHO) was established in 1978 in order to preserve and protect traditional native Hawaiian culture and cultural sites. The park is the site of an ancient Hawaiian settlement, occupies 469 ha and is considered a locale of considerable cultural and historical significance. Cultural resources include fishponds, petroglyphs and a heiau (religious site). The fishponds are also recognized as exceptional birding areas and are important wetlands for migratory birds. The ocean and reef have been designated as a Marine Area Reserve, where green sea turtles commonly come ashore to rest. The park is also a valuable recreational resource, with approximately 4 km of coastline and a protective cove ideal for snorkeling and swimming. KAHO park boundaries extend beyond the mean high tide line and include the adjacent marine environment. An accompanying report for KAHO presents the results of benthic habitat mapping of the offshore waters, from the shoreline to approximately 40 m water depth. Ground-water quality and potential downslope impacts created by development around the park are of concern to Park management.

Hawaii↗

USGS2013

Theoretical life history responses of juvenile Oncorhynchus mykiss to changes in food availability using a dynamic state-dependent approach

Marine subsidies can play an important role in the growth, survival, and migratory behavior of rearing juvenile salmonids. Availability of high-energy, marine-derived food sources during critical decision windows may influence the timing of emigration or the decision to forego emigration completely and remain in the freshwater environment. Increasing growth and growth rate during these decision windows may result in an altered juvenile population structure, which will ultimately affect the adult population age-structure. We used a state dependent model to understand how the juvenile Oncorhynchus mykiss population structure may respond to increased availability of salmon eggs in their diet during critical decision windows. Our models predicted an increase in smolt production until coho salmon eggs comprised more than 50 percent of juvenile O. mykiss diet at the peak of the spawning run. At higher-than intermediate levels of egg consumption, smolt production decreased owing to increasing numbers of fish adopting a resident life-history strategy. Additionally, greater growth rates decreased the number of age-3 smolts and increased the number of age-2 smolts. Increased growth rates with higher egg consumption also decreased the age at which fish adopted the resident pathway. Our models suggest that the introduction of a high-energy food source during critical periods of the year could be sufficient to increase smolt production.

Open-File Report↗

USGS1976

Groundwater from Lower Cretaceous rocks in Kansas

Sandstones in Lower Cretaceous rocks contain supplies, of water that may be adequate to meet increasing present and future demands for supplemental municipal and domestic use in central and western Kansas. An estimated 70 to 80 million acre-feet (86,000 to 99,000 cubic hectometers) of water containing less than 1,000 milligrams per liter dissolved solids may be acceptable for use at the present (1976). An additional 10 to 15 million acre-feet (12,000 to 18,000 cubic hectometers) containing 1,000 to 3,000 milligrams per liter dissolved solids is estimated to be available for use in the future with appropriate desalinization. Lower Cretaceous rocks crop out from Washington County on the north to Comanche County on-the south. The rocks dip from a structural high in the southwest part of the State to structural lows in the northwest and north-central part. Depth below land surface increases generally northwestward to about 2,600 feet (790 meters); thickness of the rocks increases westward, nearly zero to about 850 feet (260 meters). The rocks consist chiefly of marine to nonmarine shale and silt- stone interbedded with coastal to deltaic sandstone. The interbedded sandstone, which composes about one-third of the rocks, consists of one or more lenses that thicken westward to about 400 feet (120 meters) in the central part of western Kansas. The yield of water to individual wells is related to areal extent, thickness, and interconnection of the sand lenses and to grain size and cementation of the sand. Large amounts of water may be pumped by wells where loosely cemented sand lenses are interconnected. Wells commonly yield adequate supplies for domestic and stock use; reported yields from municipal and irrigation wells range from about 100 to 2,000 gallons per minute (6 to 125 liters per second). Recharge to the Lower Cretaceous-rocks occurs in the area of outcrop and from hydraulically connected saturated Cenozoic rocks, especially in the southern part of the State. Movement of water is principally northeastward from areas of recharge to areas of discharge where streams intersect the sandstone outcrops. Water in the sandstone aquifers commonly is confined between beds of relatively impermeable shale, causing water in wells to rise above the top of the aquifer. Water levels fluctuate in response to changes in atmospheric pressure, recharge, and discharge; greatest fluctuations result from discharge to wells for municipal and irrigation use. Progressive declines in water levels have occurred where irrigation withdrawals exceed recharge. Calcium bicarbonate water is dominant near recharge areas; mixed sodium and calcium bicarbonate water and sodium chloride water become successively dominant as the water moves downgradient from the recharge areas. The quality of water ranges from fresh to very saline (less than 1.000 to 35,000 milligrams per liter dissolved solids). In the areas of generally fresh water, localized areas of calcium sulfate water result from solution of gypsum in the Kiowa Formation, and areas of sodium chloride water result from contamination by oil-field brines.

Open-File Report↗

USGS1980

Single-channel seismic-reflection profiles from Massachusetts coastal waters and the western part of Georges Bank

The U.S. Geological Survey collected approximately 1,200 km each of airgun and minisparker single-channel seismic-reflection profiles during the R/V FAY cruise 023 in September 1976. The purpose of the 6-day cruise was to study the shallow sedimentary structure south and east of southern Massachusetts and to obtain magnetic and gravity data in these areas and in the vicinity of Great South Channel and Cape Ann. The survey was conducted by the U.S. Geological Survey as part of the Massachusetts Cooperative Marine Geologic Program. Seismic instruments used include a 1 Teledyne 600-joule minisparker system and a 20-in 3 airgun system. Navigational data during the cruise were obtained by the use of an Integrated Navigation System, which included the following subsystems: Teledyne Loran-C for both range-range and hyperbofic positions; Magnovox s'atellite receiver; Sperry Mark-29 gyrocompass; and Hewlett-Packard 21 MX computer system with dual 9-track magnetic tape recording. The original records may be studied at the U.S. Geological Survey offices in Woods Hole, Mass. Copies of the records can be purchased only from the National Geophysical and Solar-Terrestrial Data Center, NOAA/EDIS/NGSDC, Code D621, 325 Broadway, Boulder CO 80303- (303-497-6338).

Open-File Report↗

USGS1996

Geologic framework and hydrogeologic characteristics of the Edwards aquifer outcrop (Barton Springs segment), northeastern Hays and southwestern Travis Counties, Texas

The hydrogeologic subdivisions within the Barton Springs segment of the Edwards aquifer outcrop in northeastern Hays and southwestern Travis Counties generally are porous and permeable. The most porous and permeable appear to be hydrogeologic subdivision VI, the Kirschberg evaporite member of the Kainer Formation; and hydrogeologic subdivision III, the leached and collapsed members, undivided, of the Person Formation. Hydrogeologic subdivision II, the cyclic and marine members, undivided, of the Person Formation, also is quite porous and permeable in Hays County. The porosity of the rocks in the Edwards aquifer outcrop is related to depositional or diagenetic elements along specific stratigraphic horizons (fabric selective) and to dissolution and structural elements that can occur in any lithostratigraphic horizon (not fabric selective). Permeability depends on the physical properties of the rock such as pore size, shape, distribution, fissuring, dissolution, and interconnection of pores and vugs. The Edwards aquifer rocks that crop out in the Barton Springs segment of the Edwards aquifer generally have the same lithologic characteristics as the Edwards aquifer rocks that crop out in Comal and southwestern Hays Counties. However, in the northeastern part of the segment in Travis County, the rock unit that is apparently equivalent to the basal nodular member of the Kainer Formation is called the Walnut Formation. Because the units appear to be stratigraphically and lithologically equivalent, the basal nodular member is used instead of the Walnut Formation for this report. Essentially all of hydrogeologic subdivision II, which is about 70 feet thick in Hays County, is missing in Travis County. In the Barton Springs segment of the Edwards aquifer, the aquifer probably is most vulnerable to surface contamination in the rapidly urbanizing areas on the Edwards aquifer outcrop. Contamination can result from spills or leakage of hazardous materials; or runoff on the intensely faulted and fractured, karstic limestone outcrops characteristic of the recharge zone.

Texas↗

USGS2016

Geologic framework and hydrostratigraphy of the Edwards and Trinity aquifers within northern Bexar and Comal Counties, Texas

During 2014–16, the U.S. Geological Survey, in cooperation with the Edwards Aquifer Authority, documented the geologic framework and hydrostratigraphy of the Edwards and Trinity aquifers within northern Bexar and Comal Counties, Texas. The Edwards and Trinity aquifers are major sources of water for agriculture, industry, and urban and rural communities in south-central Texas. Both the Edwards and Trinity are classified as major aquifers by the State of Texas. The purpose of this report is to present the geologic framework and hydrostratigraphy of the Edwards and Trinity aquifers within northern Bexar and Comal Counties, Tex. The report includes a detailed 1:24,000-scale hydrostratigraphic map, names, and descriptions of the geology and hydrostratigraphic units (HSUs) in the study area. The scope of the report is focused on geologic framework and hydrostratigraphy of the outcrops and hydrostratigraphy of the Edwards and Trinity aquifers within northern Bexar and Comal Counties, Tex. In addition, parts of the adjacent upper confining unit to the Edwards aquifer are included. The study area, approximately 866 square miles, is within the outcrops of the Edwards and Trinity aquifers and overlying confining units (Washita, Eagle Ford, Austin, and Taylor Groups) in northern Bexar and Comal Counties, Tex. The rocks within the study area are sedimentary and range in age from Early to Late Cretaceous. The Miocene-age Balcones fault zone is the primary structural feature within the study area. The fault zone is an extensional system of faults that generally trends southwest to northeast in south-central Texas. The faults have normal throw, are en echelon, and are mostly downthrown to the southeast. The Early Cretaceous Edwards Group rocks were deposited in an open marine to supratidal flats environment during two marine transgressions. The Edwards Group is composed of the Kainer and Person Formations. Following tectonic uplift, subaerial exposure, and erosion near the end of Early Cretaceous time, the area of present-day south-central Texas was again submerged during the Late Cretaceous by a marine transgression resulting in deposition of the Georgetown Formation of the Washita Group. The Early Cretaceous Edwards Group, which overlies the Trinity Group, is composed of mudstone to boundstone, dolomitic limestone, argillaceous limestone, evaporite, shale, and chert. The Kainer Formation is subdivided into (bottom to top) the basal nodular, dolomitic, Kirschberg Evaporite, and grainstone members. The Person Formation is subdivided into (bottom to top) the regional dense, leached and collapsed (undivided), and cyclic and marine (undivided) members. Hydrostratigraphically the rocks exposed in the study area represent a section of the upper confining unit to the Edwards aquifer, the Edwards aquifer, the upper zone of the Trinity aquifer, and the middle zone of the Trinity aquifer. The Pecan Gap Formation (Taylor Group), Austin Group, Eagle Ford Group, Buda Limestone, and Del Rio Clay are generally considered to be the upper confining unit to the Edwards aquifer. The Edwards aquifer was subdivided into HSUs I to VIII. The Georgetown Formation of the Washita Group contains HSU I. The Person Formation of the Edwards Group contains HSUs II (cyclic and marine members [Kpcm], undivided), III (leached and collapsed members [Kplc,] undivided), and IV (regional dense member [Kprd]), and the Kainer Formation of the Edwards Group contains HSUs V (grainstone member [Kkg]), VI (Kirschberg Evaporite Member [Kkke]), VII (dolomitic member [Kkd]), and VIII (basal nodular member [Kkbn]). The Trinity aquifer is separated into upper, middle, and lower aquifer units (hereinafter referred to as “zones”). The upper zone of the Trinity aquifer is in the upper member of the Glen Rose Limestone. The middle zone of the Trinity aquifer is formed in the lower member of the Glen Rose Limestone, Hensell Sand, and Cow Creek Limestone. The regionally extensive Hammett Shale forms a confining unit between the middle and lower zones of the Trinity aquifer. The lower zone of the Trinity aquifer consists of the Sligo and Hosston Formations, which do not crop out in the study area. The upper zone of the Trinity aquifer is subdivided into five informal HSUs (top to bottom): cavernous, Camp Bullis, upper evaporite, fossiliferous, and lower evaporite. The middle zone of the Trinity aquifer is composed of the (top to bottom) Bulverde, Little Blanco, Twin Sisters, Doeppenschmidt, Rust, Honey Creek, Hensell, and Cow Creek HSUs. The underlying Hammett HSU is a regional confining unit between the middle and lower zones of the Trinity aquifer. The lower zone of the Trinity aquifer is not exposed in the study area. Groundwater recharge and flow paths in the study area are influenced not only by the hydrostratigraphic characteristics of the individual HSUs but also by faults and fractures and geologic structure. Faulting associated with the Balcones fault zone (1) might affect groundwater flow paths by forming a barrier to flow that results in water moving parallel to the fault plane, (2) might affect groundwater flow paths by increasing flow across the fault because of fracturing and juxtaposing porous and permeable units, or (3) might have no effect on the groundwater flow paths. The hydrologic connection between the Edwards and Trinity aquifers and the various HSUs is complex. The complexity of the aquifer system is a combination of the original depositional history, bioturbation, primary and secondary porosity, diagenesis, and fracturing of the area from faulting. All of these factors have resulted in development of modified porosity, permeability, and transmissivity within and between the aquifers. Faulting produced highly fractured areas that have allowed for rapid infiltration of water and subsequently formed solutionally enhanced fractures, bedding planes, channels, and caves that are highly permeable and transmissive. The juxtaposition resulting from faulting has resulted in areas of interconnectedness between the Edwards and Trinity aquifers and the various HSUs that form the aquifers.

Texas↗

USGS2012

Demographic population model for American shad: will access to additional habitat upstream of dams increase population sizes?

American shad Alosa sapidissima are in decline in their native range, and modeling possible management scenarios could help guide their restoration. We developed a density-dependent, deterministic, stage-based matrix model to predict the population-level results of transporting American shad to suitable spawning habitat upstream of dams on the Roanoke River, North Carolina and Virginia. We used data on sonic-tagged adult American shad and oxytetracycline-marked American shad fry both above and below dams on the Roanoke River with information from other systems to estimate a starting population size and vital rates. We modeled the adult female population over 30 years under plausible scenarios of adult transport, effective fecundity (egg production), and survival of adults (i.e., to return to spawn the next year) and juveniles (from spawned egg to age 1). We also evaluated the potential effects of increased survival for adults and juveniles. The adult female population size in the Roanoke River was estimated to be 5,224. With no transport, the model predicted a slow population increase over the next 30 years. Predicted population increases were highest when survival was improved during the first year of life. Transport was predicted to benefit the population only if high rates of effective fecundity and juvenile survival could be achieved. Currently, transported adults and young are less likely to successfully out-migrate than individuals below the dams, and the estimated adult population size is much smaller than either of two assumed values of carrying capacity for the lower river; therefore, transport is not predicted to help restore the stock under present conditions. Research on survival rates, density-dependent processes, and the impacts of structures to increase out-migration success would improve evaluation of the potential benefits of access to additional spawning habitat for American shad.

North Carolina, Virginia↗

USGS2008

Phase shift from a coral to a corallimorph-dominated reef associated with a shipwreck on Palmyra atoll

Coral reefs can undergo relatively rapid changes in the dominant biota, a phenomenon referred to as phase shift. Various reasons have been proposed to explain this phenomenon including increased human disturbance, pollution, or changes in coral reef biota that serve a major ecological function such as depletion of grazers. However, pinpointing the actual factors potentially responsible can be problematic. Here we show a phase shift from coral to the corallimorpharian Rhodactis howesii associated with a long line vessel that wrecked in 1991 on an isolated atoll (Palmyra) in the central Pacific Ocean. We documented high densities of R. howesii near the ship that progressively decreased with distance from the ship whereas R. howesii were rare to absent in other parts of the atoll. We also confirmed high densities of R. howesii around several buoys recently installed on the atoll in 2001. This is the first time that a phase shift on a coral leef has been unambiguously associated with man-made structures. This association was made, in part, because of the remoteness of Palmyra and its recent history of minimal human habitation or impact. Phase shifts can have long-term negative ramification for coral reefs, and eradication of organisms responsible for phase shifts in marine ecosystems can be difficult, particularly if such organisms cover a large area. The extensive R. howesii invasion and subsequent loss of coral reef habitat at Palmyra also highlights the importance of rapid removal of shipwrecks on corals reefs to mitigate the potential of reef overgrowth by invasives.

Palmyra Atoll↗

USGS2011

Integrating science and resource management in Tampa Bay, Florida

Tampa Bay is recognized internationally for its remarkable progress towards recovery since it was pronounced "dead" in the late 1970s. Due to significant efforts by local governments, industries and private citizens throughout the watershed, water clarity in Tampa Bay is now equal to what it was in 1950, when population in the watershed was less than one-quarter of what it is today. Seagrass extent has increased by more than 8,000 acres since the mid-1980s, and fish and wildlife populations are increasing. Central to this successful turn-around has been the Tampa Bay resource management community's long-term commitment to development and implementation of strong science-based management strategies. Research institutions and agencies, including Eckerd College, the Florida Wildlife Commission Fish and Wildlife Research Institute, Mote Marine Laboratory, National Oceanic and Atmospheric Administration, the Southwest Florida Water Management District, University of South Florida, U.S. Environmental Protection Agency, U.S. Geological Survey, local and State governments, and private companies contribute significantly to the scientific basis of our understanding of Tampa Bay's structure and ecological function. Resource management agencies, including the Tampa Bay Regional Planning Council's Agency on Bay Management, the Southwest Florida Water Management District's Surface Water Improvement and Management Program, and the Tampa Bay Estuary Program, depend upon this scientific basis to develop and implement regional adaptive management programs. The importance of integrating science with management has become fully recognized by scientists and managers throughout the region, State and Nation. Scientific studies conducted in Tampa Bay over the past 10–15 years are increasingly diverse and complex, and resource management programs reflect our increased knowledge of geology, hydrology and hydrodynamics, ecology and restoration techniques. However, a synthesis of this research and its integration into resource management has not been prepared for Tampa Bay since the mid-1980s. The need for an up-to-date synthesis of Tampa Bay science and management has resulted in the production of this document. The U.S. Geological Survey recently completed a 5-year Tampa Bay Integrated Science Study, and the Tampa Bay Estuary Program updated the Comprehensive Conservation and Management Plan for Tampa Bay in 2006. These efforts build upon results of the many research and management studies and programs summarized here.

Florida↗