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At least 415 records · Page 23Linked to original sources
USGS2015

Climate-induced lake drying causes heterogeneous reductions in waterfowl species richness

Context Lake size has declined on breeding grounds for international populations of waterfowl. Objectives Our objectives were to (1) model the relationship between waterfowl species richness and lake size; (2) use the model and trends in lake size to project historical, contemporary, and future richness at 2500+ lakes; (3) evaluate mechanisms for the species–area relationship (SAR); and (4) identify species most vulnerable to shrinking lakes. Methods Monte Carlo simulations of the richness model were used to generate projections. Correlations between richness and both lake size and habitat diversity were compared to identify mechanisms for the SAR. Patterns of nestedness were used to identify vulnerable species. Results Species richness was greatest at lakes that were larger, closer to rivers, had more wetlands along their perimeters and were within 5 km of a large lake. Average richness per lake was projected to decline by 11 % from 1986 to 2050 but was heterogeneous across sub-regions and lakes. Richness in sub-regions with species-rich lakes was projected to remain stable, while richness in the sub-region with species-poor lakes was projected to decline. Lake size had a greater effect on richness than did habitat diversity, suggesting that large lakes have more species because they provide more habitat but not more habitat types. The vulnerability of species to shrinking lakes was related to species rarity rather than foraging guild. Conclusions Our maps of projected changes in species richness and rank-ordered list of species most vulnerable to shrinking lakes can be used to identify targets for conservation or monitoring.

Landscape Ecology↗
USGS2022

Using piecewise regression to identify biological phenomena in biotelemetry datasets

1. Technological advances in the field of animal tracking have greatly expanded the potential to remotely monitor animals, opening the door to exploring how animals shift their behavior over time or respond to external stimuli. A wide variety of animal-borne sensors can provide information on an animal’s location, movement characteristics, external environmental conditions, and internal physiological status. 2. Here, we demonstrate how piecewise regression can be used to identify the presence and timing of potential shifts in a variety of biological responses using GPS telemetry and other biologging data streams. Different biological latent states can be inferred by partitioning a time-series into multiple segments based on changes in modeled responses (e.g., their mean, variance, trend, degree of autocorrelation) and specifying a unique model structure for each interval. 3. We provide six example applications highlighting a variety of taxonomic species, data streams, timescales and biological phenomena. These examples include a short-term behavioural response (flee and return) by a trumpeter swan Cygnus buccinator following a GPS collar deployment; remote identification of parturition based on movements by a pregnant moose Alces alces ; a physiological response (spike in heart-rate) in a black bear Ursus americanus to a stressful stimulus(presence of a drone); a mortality event of a trumpeter swan signalled by changes in collar temperature and overall dynamic body acceleration; an unsupervised method for identifying the onset, return, duration and staging use of sandhill crane Antigone canadensis migration; and estimation of the transition between incubation and brood-rearing (i.e. hatching) for a breeding trumpeter swan. 4. We implement analyses using the MCP package in R, which provides functionality for specifying and fitting a wide variety of user-defined model structures in a Bayesian framework and methods for assessing and comparing models using information criteria and cross-validation measures.

Journal of Animal Ecology↗
USGS2007

Monitoring boreal forest leaf area index across a Siberian burn chronosequence: A MODIS validation study

Landscapes containing differing amounts of ecological disturbance provide an excellent opportunity to validate and better understand the emerging Moderate Resolution Imaging Spectrometer (MODIS) vegetation products. Four sites, including 1‐year post‐fire coniferous, 13‐year post‐fire deciduous, 24‐year post‐fire deciduous, and >100 year old post‐fire coniferous forests, were selected to serve as a post‐fire chronosequence in the central Siberian region of Krasnoyarsk (57.3&deg;N, 91.6&deg;E) with which to study the MODIS leaf area index (LAI) and vegetation index (VI) products. The collection 4 MODIS LAI product correctly represented the summer site phenologies, but significantly underestimated the LAI value of the >100 year old coniferous forest during the November to April time period. Landsat 7‐derived enhanced vegetation index (EVI) performed better than normalized difference vegetation index (NDVI) to separate the deciduous and conifer forests, and both indices contained significant correlation with field‐derived LAI values at coniferous forest sites ( r 2 = 0.61 and r 2 = 0.69, respectively). The reduced simple ratio (RSR) markedly improved LAI prediction from satellite measurements ( r 2 = 0.89) relative to NDVI and EVI. LAI estimates derived from ETM+ images were scaled up to evaluate the 1 km resolution MODIS LAI product; from this analysis MODIS LAI overestimated values in the low LAI deciduous forests (where LAI<5) and underestimated values in the high LAI conifer forests (where LAI>6). Our results indicate that further research on the MODIS LAI product is warranted to better understand and improve remote LAI quantification in disturbed forest landscapes over the course of the year.

Krasnoyarsk Kray↗
USGS2017

Operationalizing the telecoupling framework for migratory species using the spatial subsidies approach to examine ecosystem services provided by Mexican free-tailed bats

Drivers of environmental change in one location can have profound effects on ecosystem services and human well-being in distant locations, often across international borders. The telecoupling provides a conceptual framework for describing these interactions—for example, locations can be defined as sending areas (sources of flows of ecosystem services, energy, or information) or receiving areas (recipients of flows). However, the ability to quantify feedbacks between ecosystem change in one area and societal benefits in other areas requires analytical approaches. We use spatial subsidies—an approach developed to measure the degree to which a migratory species’ ability to provide services in one location depends on habitat in another location—as an example of how telecoupling can be operationalized. Using the cotton pest control and ecotourism services of Mexican free-tailed bats as an example, we determined that of the 16 states in the United States and Mexico where the species resides, three states (Texas, New Mexico, and Colorado) are receiving areas, while the rest of the states are sending areas. In addition, the magnitude of spatial subsidy can be used as an indicator of the degree to which different locations are telecoupled to other locations. In this example, the Mexican free-tailed bat ecosystem services to cotton production and ecotourism in Texas and New Mexico are heavily dependent on winter habitat in four states in central and southern Mexico. In sum, spatial subsidies can be used to operationalize the telecoupling conceptual framework by identifying sending and receiving areas, and by indicating the degree to which locations are telecoupled to other locations.

Ecology and Society↗
USGS2015

On formally integrating science and policy: walking the walk

The contribution of science to the development and implementation of policy is typically neither direct nor transparent. In 1995, the U.S. Fish and Wildlife Service (FWS) made a decision that was unprecedented in natural resource management, turning to an unused and unproven decision process to carry out trust responsibilities mandated by an international treaty. The decision process was adopted for the establishment of annual sport hunting regulations for the most economically important duck population in North America, the 6 to 11 million mallards Anas platyrhynchos breeding in the mid-continent region of north-central United States and central Canada. The key idea underlying the adopted decision process was to formally embed within it a scientific process designed to reduce uncertainty (learn) and thus make better decisions in the future. The scientific process entails use of models to develop predictions of competing hypotheses about system response to the selected action at each decision point. These prediction not only are used to select the optimal management action, but also are compared with the subsequent estimates of system state variables, providing evidence for modifying degrees of confidence in, and hence relative influence of, these models at the next decision point. Science and learning in one step are formally and directly incorporated into the next decision, contrasting with the usual ad hoc and indirect use of scientific results in policy development and decision-making. Application of this approach over the last 20 years has led to a substantial reduction in uncertainty, as well as to an increase in transparency and defensibility of annual decisions and a decrease in the contentiousness of the decision process. As resource managers are faced with increased uncertainty associated with various components of global change, this approach provides a roadmap for the future scientific management of natural resources.

Journal of Applied Ecology↗
USGS1982

Ecology of avian brood parasitism at an early interfacing of host and parasite populations

The shiny cowbird (Molothrus bonariensis), a brood parasite, has recently spread into the Greater Antilles from South America via the Lesser Antilles. This species is a host generalist and upon reaching Puerto Rico exploited avian communities with no history of social parasitism. Forty-two percent of the resident non-raptorial land bird species were parasitized in mangrove habitat study areas. Cowbird parasitism affected hosts by (1) depressing nest success an average of 41 percent below non-parasitized nests, and (2) reducing host productivity. Parasitized hosts produced 12 percent fewer eggs and fledged 67 percent fewer of their own chicks than non-parasitized pairs. Growth rates of chicks of some host species were lower in parasitized nests compared with non-parasitized nests while growth of others was not affected by brood parasitism. Cowbird chick growth varied directly with host size; i.e., cowbird chicks grew faster and attained greater fledging weight and body size in nests of larger hosts. Factors important in shiny cowbird host selection were examined within the mangrove study community. Cowbirds did not parasitize avian species in proportion to their abundance. The cowbird breeding season coincided with that of its major hosts, which were high quality foster species, and did not extend into other periods even though nests of poor quality species were available. Food habits and egg size of cowbirds were similar to those of their hosts, suggesting that cowbirds choose hosts partly on the basis of this alignment. Cowbirds locate nests by cryptically watching activities of birds in likely habitat. Despite the recency of the cowbird's arrival in Puerto Rico, some nesting species have effective anti-parasite strategies, including alien egg rejection and nest guarding. Behavior effective in avoiding parasitism is similar to that used by certain birds in evading nest predators. It is suggested that anti-predator behavior is preadaptive to countering cowbird parasitism.

Dissertation Abstracts International↗
USGS2013

Effects of drought on birds and riparian vegetation in the Colorado River Delta, Mexico

The riparian corridor in the delta of the Colorado River in Mexico supports internationally important bird habitat. The vegetation is maintained by surface flows from the U.S. and Mexico and by a high, non-saline aquifer into which the dominant phreatophytic shrubs and trees are rooted. We studied the effects of a regional drought on riparian vegetation and avian abundance and diversity from 2002 to 2007, during which time surface flows were markedly reduced compared to the period from 1995 to 2002. Reduced surface flows led to a reduction in native tree cover but an increase in shrub cover, mostly due to an increase in Tamarix spp., an introduced halophytic shrub, and a reduction in Populus fremontii and Salix gooddingii trees. However, overall vegetation cover was unchanged at about 70%. Overall bird density and diversity were also unchanged, but riparian-obligate species tended to decrease in abundance, and generalist species increased. Although reduction in surface flows reduced habitat value and negatively impacted riparian-obligate bird species, portions of the riparian zone exhibited resilience. Surface flows are required to reduce soil salt levels and germinate new cohorts of native trees, but the main source of water supporting this ecosystem is the aquifer, derived from underflows from irrigated fields in the U.S. and Mexico. The long-term prospects for delta riparian habitats are uncertain due to expected reduced flows of river water from climate change, and land use practices that will reduce underflows to the riparian aquifer and increase salinity levels. Active restoration programs would be needed if these habitats are to be preserved for the future.

Colorado River↗
USGS2019

The contribution of road-based citizen science to the conservation of pond-breeding amphibians

Roadside amphibian citizen science (CS) programmes bring together volunteers focused on collecting scientific data while working to mitigate population declines by reducing road mortality of pond‐breeding amphibians. Despite the international popularity of these movement‐based, roadside conservation efforts (i.e. “big nights,” “bucket brigades” and “toad patrols”), direct benefits to conservation have rarely been quantified or evaluated. As a case study, we used a population simulation approach to evaluate how volunteer intensity, frequency and distribution influence three conservation outcomes (minimum population size, population growth rate and years to extinction) of the spotted salamander ( Ambystoma maculatum ), often a focal pond‐breeding amphibian of CS and conservation programmes in the United States. Sensitivity analysis supported the expectation that spotted salamander populations were primarily recruitment‐driven. Thus, conservation outcomes were highest when volunteers focused on metamorph outmigration as opposed to adult in‐migration—contrary to the typical timing of such volunteer events. Almost every volunteer strategy resulted in increased conservation outcomes compared to a no‐volunteer strategy. Specifically, volunteer frequency during metamorph migration increased outcomes more than the same increases in volunteer effort during adult migration. Small population sizes resulted in a negligible effect of volunteer intensity. Volunteers during the first adult in‐migration had a relatively small effect compared to most other strategies. Synthesis and applications . Although citizen science (CS)‐focused conservation actions could directly benefit declining populations, additional conservation measures are needed to halt or reverse local amphibian declines. This study demonstrates a need to evaluate the effectiveness of focusing CS mitigation efforts on the metamorph stage, as opposed to the adult stage. This may be challenging, compared to other management actions such as road‐crossing infrastructure. Current amphibian CS programmes will be challenged to balance implementing evidence‐based conservation measures on the most limiting life stage, while retaining social and community benefits for volunteers.

Journal of Applied Ecology↗
USGS2011

Millennial precipitation reconstruction for the Jemez Mountains, New Mexico, reveals changing drought signal

Drought is a recurring phenomenon in the American Southwest. Since the frequency and severity of hydrologic droughts and other hydroclimatic events are of critical importance to the ecology and rapidly growing human population of this region, knowledge of long-term natural hydroclimatic variability is valuable for resource managers and policy-makers. An October–June precipitation reconstruction for the period AD 824–2007 was developed from multi-century tree-ring records of Pseudotsuga menziesii (Douglas-fir), Pinus strobiformis (Southwestern white pine) and Pinus ponderosa (Ponderosa pine) for the Jemez Mountains in Northern New Mexico. Calibration and verification statistics for the period 1896–2007 show a high level of skill, and account for a significant portion of the observed variance (>50%) irrespective of which period is used to develop or verify the regression model. Split-sample validation supports our use of a reconstruction model based on the full period of reliable observational data (1896–2007). A recent segment of the reconstruction (2000–2006) emerges as the driest 7-year period sensed by the trees in the entire record. That this period was only moderately dry in precipitation anomaly likely indicates accentuated stress from other factors, such as warmer temperatures. Correlation field maps of actual and reconstructed October–June total precipitation, sea surface temperatures and 500-mb geopotential heights show characteristics that are similar to those indicative of El Niño–Southern Oscillation patterns, particularly with regard to ocean and atmospheric conditions in the equatorial and north Pacific. Our 1184-year reconstruction of hydroclimatic variability provides long-term perspective on current and 20th century wet and dry events in Northern New Mexico, is useful to guide expectations of future variability, aids sustainable water management, provides scenarios for drought planning and as inputs for hydrologic models under a broader range of conditions than those provided by historical climate records.

New Mexico↗
USGS2015

Mapping migratory flyways in Asia using dynamic Brownian bridge movement models

Background Identifying movement routes and stopover sites is necessary for developing effective management and conservation strategies for migratory animals. In the case of migratory birds, a collection of migration routes, known as a flyway, is often hundreds to thousands of kilometers long and can extend across political boundaries. Flyways encompass the entire geographic range between the breeding and non-breeding areas of a population, species, or a group of species, and they provide spatial frameworks for management and conservation across international borders. Existing flyway maps are largely qualitative accounts based on band returns and survey data rather than observed movement routes. In this study, we use satellite and GPS telemetry data and dynamic Brownian bridge movement models to build upon existing maps and describe waterfowl space use probabilistically in the Central Asian and East Asian-Australasian Flyways. Results Our approach provided new information on migratory routes that was not easily attainable with existing methods to describe flyways. Utilization distributions from dynamic Brownian bridge movement models identified key staging and stopover sites, migration corridors and general flyway outlines in the Central Asian and East Asian-Australasian Flyways. A map of space use from ruddy shelducks depicted two separate movement corridors within the Central Asian Flyway, likely representing two distinct populations that show relatively strong connectivity between breeding and wintering areas. Bar-headed geese marked at seven locations in the Central Asian Flyway showed heaviest use at several stopover sites in the same general region of high-elevation lakes along the eastern Qinghai-Tibetan Plateau. Our analysis of data from multiple Anatidae species marked at sites throughout Asia highlighted major movement corridors across species and confirmed that the Central Asian and East Asian-Australasian Flyways were spatially distinct. Conclusions The dynamic Brownian bridge movement model improves our understanding of flyways by estimating relative use of regions in the flyway while providing detailed, quantitative information on migration timing and population connectivity including uncertainty between locations. This model effectively quantifies the relative importance of different migration corridors and stopover sites and may help prioritize specific areas in flyways for conservation of waterbird populations.

Movement Ecology↗
USGS2017

Monitoring land surface albedo and vegetation dynamics using high spatial and temporal resolution synthetic time series from Landsat and the MODIS BRDF/NBAR/albedo product

Seasonal vegetation phenology can significantly alter surface albedo which in turn affects the global energy balance and the albedo warming/cooling feedbacks that impact climate change. To monitor and quantify the surface dynamics of heterogeneous landscapes, high temporal and spatial resolution synthetic time series of albedo and the enhanced vegetation index (EVI) were generated from the 500 m Moderate Resolution Imaging Spectroradiometer (MODIS) operational Collection V006 daily BRDF/NBAR/albedo products and 30 m Landsat 5 albedo and near-nadir reflectance data through the use of the Spatial and Temporal Adaptive Reflectance Fusion Model (STARFM). The traditional Landsat Albedo (Shuai et al., 2011) makes use of the MODIS BRDF/Albedo products (MCD43) by assigning appropriate BRDFs from coincident MODIS products to each Landsat image to generate a 30 m Landsat albedo product for that acquisition date. The available cloud free Landsat 5 albedos (due to clouds, generated every 16 days at best) were used in conjunction with the daily MODIS albedos to determine the appropriate 30 m albedos for the intervening daily time steps in this study. These enhanced daily 30 m spatial resolution synthetic time series were then used to track albedo and vegetation phenology dynamics over three Ameriflux tower sites (Harvard Forest in 2007, Santa Rita in 2011 and Walker Branch in 2005). These Ameriflux sites were chosen as they are all quite nearby new towers coming on line for the National Ecological Observatory Network (NEON), and thus represent locations which will be served by spatially paired albedo measures in the near future. The availability of data from the NEON towers will greatly expand the sources of tower albedometer data available for evaluation of satellite products. At these three Ameriflux tower sites the synthetic time series of broadband shortwave albedos were evaluated using the tower albedo measurements with a Root Mean Square Error (RMSE) less than 0.013 and a bias within the range of ±0.006. These synthetic time series provide much greater spatial detail than the 500 m gridded MODIS data, especially over more heterogeneous surfaces, which improves the efforts to characterize and monitor the spatial variation across species and communities. The mean of the difference between maximum and minimum synthetic time series of albedo within the MODIS pixels over a subset of satellite data of Harvard Forest (16 km by 14 km) was as high as 0.2 during the snow-covered period and reduced to around 0.1 during the snow-free period. Similarly, we have used STARFM to also couple MODIS Nadir BRDF Adjusted Reflectances (NBAR) values with Landsat 5 reflectances to generate daily synthetic times series of NBAR and thus Enhanced Vegetation Index (NBAR-EVI) at a 30 m resolution. While normally STARFM is used with directional reflectances, the use of the view angle corrected daily MODIS NBAR values will provide more consistent time series. These synthetic times series of EVI are shown to capture seasonal vegetation dynamics with finer spatial and temporal details, especially over heterogeneous land surfaces.

International Journal of Applied Earth Observation↗
USGS2025

Are we heading towards a global decrease in coregonine catches?

Coregonines have specific ecological needs, making them potentially very vulnerable to changes in lake conditions. A contemporary concern is that many lakes worldwide are experiencing environmental changes due to anthropogenic pressure and climate warming. Here, we compiled long-term data of coregonine catches from 27 lakes from three continents in the northern hemisphere. Declines in catch were observed in 67% of the lakes during the first two decades of the 21 st century, with a significant trend (p-value<0.05) in 44% of the cases. An analysis to determine whether trends are globally linked to environmental conditions and specific lake attributes was carried out on 26 lakes for the period 2000–2019. Several local declines in catches had already been documented in the literature and are likely to be due to local forcing such as nutrients, species invasions and changes in fishing practices. Nevertheless, on a global scale, our results indicate that lakes, which exhibited a significant decrease in catch were larger and more nutrient-poor than other lakes. The rate of change in catches appeared to be related to the trophic state of the lake. The specific effect of warming is difficult to determine during the studied period. When warming occurred outside the period of egg incubation, decreasing trends were more frequently observed in nutrient-poor than in mesotrophic lakes. In conclusion, our findings suggest that achieving oligo- or ultraoligotrophic conditions, as required in developed countries to control phytoplankton blooms and enhance water quality, could pose significant challenges for future management of coregonine fisheries.

International Journal of Limnology↗
USGS2013

Vegetation dynamics in response to water inflow rates and fire in a brackish Typha domingensis Pers. marsh in the delta of the Colorado River, Mexico

The Cienega de Santa Clara is a 5600 ha, anthropogenic wetland in the delta of the Colorado River in Mexico. It is the inadvertent creation of the disposal of brackish agricultural waste water from the U.S. into the intertidal zone of the river delta in Mexico, but has become an internationally important wetland for resident and migratory water birds. We used high resolution Quickbird and WorldView-2 images to produce seasonal vegetation maps of the Cienega before, during and after a test run of the Yuma Desalting Plant, which will remove water from the inflow stream and replace it with brine. We also used moderate resolution, 16-day composite NDVI imagery from the Moderate Resolution Imaging Spectrometer (MODIS) sensors on the Terra satellite to determine the main factors controlling green vegetation density over the years 2000–2011. The marsh is dominated by Typha domingensis Pers. with Phragmites australis (Cav.) Trin. Ex Steud. as a sub-dominant species in shallower marsh areas. The most important factor controlling vegetation density was fire. Spring fires in 2006 and 2011 were followed by much more rapid green-up of T. domingensis in late spring and 30% higher peak summer NDVI values compared to non-fire years ( P < 0.001). Fires removed thatch and returned nutrients to the water, resulting in more vigorous vegetation growth compared to non-fire years. The second significant ( P < 0.01) factor controlling NDVI was flow rate of agricultural drain water from the U.S. into the marsh. Reduced summer flows in 2001 due to canal repairs, and in 2010 during the YDP test run, produced the two lowest NDVI values of the time series from 2000 to 2011 ( P < 0.05). Salinity is a further determinant of vegetation dynamics as determined by greenhouse experiments, but was nearly constant over the period 2000–2011, so it was not a significant variable in regression analyses. It is concluded that any reduction in inflow volumes will result in a linear decrease in green foliage density in the marsh.

Ecological Engineering↗
USGS2021

Modeling structural mechanics of oyster reef self-organization including environmental constraints and community interactions

Self-organization is a process of establishing and reinforcing local structures through feedbacks between internal population dynamics and external factors. In reef-building systems, substrate is collectively engineered by individuals that also occupy it and compete for space. Reefs are constrained spatially by the physical environment, and by mortality, which reduces production but exposes substrate for recruits. Reef self-organization therefore depends on efficient balancing of production and occupancy of substrate. To examine this, we develop a three-dimensional individual-based model (IBM) of oyster reef mechanics. Shell substrate is grown by individuals as valves, accumulates at the reef level, and degrades following mortality. Single restoration events and subsequent dynamics are simulated for a case study in South Carolina (USA). Variability in model processes is included on recruitment, spatial environmental constraints, and predation, over multiple independent runs and five predator community scenarios. The main goal for this study is to summarize trends in dynamics that are robust across this uncertainty, and from these generate new hypotheses and predictions for future studies. Simulation results demonstrate three phases following restoration: initial transient dynamics with considerable shell loss, followed by growth and saturation of the live population, and then saturation of settlement habitat several years later. Over half of simulations recoup initial shell losses as populations grow, while others continue in decline. The balance between population density, substrate supporting the reef, and exposed surfaces for settlement is mediated by overall population size and size structure, presence of predators, and relative amounts of live individuals and intact dead shells. The efficiency of settlement substrate production improves through time as population size structure becomes more complex, and the population of dead valves accumulates.

Ecological Modelling↗
USGS2013

Approaches to setting organism-based ballast water discharge standards

As a vector by which foreign species invade coastal and freshwater waterbodies, ballast water discharge from ships is recognized as a major environmental threat. The International Maritime Organization (IMO) drafted an international treaty establishing ballast water discharge standards based on the number of viable organisms per volume of ballast discharge for different organism size classes. Concerns that the IMO standards are not sufficiently protective have initiated several state and national efforts in the United States to develop more stringent standards. We evaluated seven approaches to establishing discharge standards for the >50-μm size class: (1) expert opinion/management consensus, (2) zero detectable living organisms, (3) natural invasion rates, (4) reaction–diffusion models, (5) population viability analysis (PVA) models, (6) per capita invasion probabilities (PCIP), and (7) experimental studies. Because of the difficulty in synthesizing scientific knowledge in an unbiased and transparent fashion, we recommend the use of quantitative models instead of expert opinion. The actual organism concentration associated with a “zero detectable organisms” standard is defined by the statistical rigor of its monitoring program; thus it is not clear whether such a standard is as stringent as other standards. For several reasons, the natural invasion rate, reaction–diffusion, and experimental approaches are not considered suitable for generating discharge standards. PVA models can be used to predict the likelihood of establishment of introduced species but are limited by a lack of population vital rates for species characteristic of ballast water discharges. Until such rates become available, PVA models are better suited to evaluate relative efficiency of proposed standards rather than predicting probabilities of invasion. The PCIP approach, which is based on historical invasion rates at a regional scale, appears to circumvent many of the indicated problems, although it may underestimate invasions by asexual and parthenogenic species. Further research is needed to better define propagule dose–responses, densities at which Allee effects occur, approaches to predicting the likelihood of invasion from multi-species introductions, and generation of formal comparisons of approaches using standardized scenarios.

Ecological Applications↗
USGS2024

Annotated bibliography of scientific research relevant to oil and gas reclamation best management practices in the western United States, published from 1969 through 2020

Integrating recent scientific knowledge into management decisions supports effective natural resource management and can lead to better resource outcomes. However, finding and accessing scientific knowledge can be time consuming and costly. To assist in this process, the U.S. Geological Survey has created a series of annotated bibliographies on topics of management concern for lands in the western United States (U.S.). Oil and gas development on public lands is a long-standing and substantial component of local and regional economies and has expanded in recent decades, particularly on public lands in the western U.S. This development is associated with extensive networks of pipelines, roads, and processing facilities, across which reclamation is Federally mandated following initial well pad development (“interim” reclamation) and once resource extraction is complete (“final” reclamation). Reclamation is critical for recovering ecological services to energy-affected lands, including vegetation productivity, wildlife habitat, water and air quality, and soil stability (for example, resistance to wind and water erosion). However, reclamation of oil and gas affected lands in the western U.S. has proved challenging due to an array of regulatory and environmental factors, such as minimally developed soils, short growing seasons, herbivory, high winds, invasive species, rugged terrain, and in particular, arid climates associated with low total precipitation, high evapotranspiration rates, and highly variable precipitation patterns. We compiled and summarized journal articles, government reports, technical reports, proceedings, and theses and dissertations relevant to oil and gas reclamation. We constrained our search to products published on or before December 31, 2020 but did not limit our search by a starting date; the earliest product resulting from this effort was published in March 1969. Second, we manually scanned the last 15 years (2005-2020) of tables of contents in journals, bibliographies, and proceedings of which we were aware would contain articles highly relevant to this bibliography. We carried out the search for these products through multiple means: (1) performing a structured search of two reference databases, (2) examining articles published since 2005 in highly relevant scientific journals and conference proceedings, and (3) reviewing additional material suggested by authors of products identified in steps 1 and 2. Our search was intentionally broad in order to identify as much relevant work as possible, much of which is professionally applied and tested within the industry of oil and gas reclamation, but which remains unpublished in scientific journals. We refined the initial list of products by removing: (1) duplicates, (2) products not written in English, (3) products that were not relevant to the arid ecosystems of western North America, (4) products that were not released as research, data products, or review articles in journals or as formal scientific reports, and (5) products with data which were not relevant to reclamation of oil and gas-affected lands, or for which the study did not present new data, findings, or syntheses relevant to reclamation of oil and gas-affected lands. We summarized each product using a consistent structure (background, objectives, methods, location, findings, and implications) and assigned standardized management topics to each. Management topics are intended to aid online searching within the bibliography and are described in more detail in the Methods Section of this report; they include what type of disturbance the product addresses (well pads, mining, pipelines), what aspect of oil and gas reclamation they pertain to (practices, standards, monitoring), what type of data are present in the product (for instance soil or vegetation recovery data), and an indication if the product were from a source other than a published, peer-reviewed outlet (such as dissertations or unpublished professional reports – these are identified as grey literature). The review process for this annotated bibliography included an initial internal colleague review of each summary, requesting input on each summary from an author of the original product, and a formal peer-review. Our initial searches resulted in 3,197 total products, of which 290 met our criteria for inclusion. “Reclamation Practices” is by far the management topic most addressed, followed by “Reclamation Monitoring,” for example, products assessing what and how monitoring methods are used to track and measure reclamation outcome. This document may be accessed at https://doi.org/10.3133/ofr20231068 or from the U.S. Geological Survey Publication Warehouse ( https://pubs.usgs.gov/ ). The 1-page product summaries herein will also be used to create a bibliography at https://apps.usgs.gov/science-for-resource-managers that includes links to each original product, where available, and in which subject matter will be searchable by topic, location, and year. The studies compiled and summarized here may inform planning and management actions that seek to reclaim landscapes across the western U.S. which have been affected by oil and gas development.

Open-File Report↗
USGS2023

Luminescence ages and new interpretations of the timing and deposition of Quaternary sediments at Natural Trap Cave, Wyoming

Natural Trap Cave, located in the Big Horn Mountains of north-central Wyoming, has a history of trapping and preserving a range of North American fauna that plummeted into the deep vertical entrance. These animal remains were buried and preserved within sediments of the main chamber and, in turn, have helped elucidate the procession of faunal dynamics during the latest glacial cycle. The cave location, south of the Laurentide and Cordilleran Ice Sheets, and proximal to Yellowstone, is at an ideal geographical juncture to provide insights to ecological changes in North America. The sediments that the animals are buried in inform us about transport and deposition both inside and outside of the cave that relate to catchment dynamics. We report on a series of optically stimulated luminescence (OSL) ages derived from samples obtained within the cave during excavation work in 2014 and in 2018. We also examine chronology produced by argon, tephrochronology, fission track, and luminescence techniques that have been used for understanding the infilling of the cave. The cave sediment ages and in situ measured gamma spectroscopy as measured in this study helped resolve an improved chronological age model when combined with previous data. The suite of OSL ages is interpreted through the stratigraphic relationships (and vertebrates contained within) which requires the use of an adequate age model; we use either the central age model or minimum age model where appropriate and with justification. Lowest sediments are dated to ∼150 ka with a hiatus at ∼130 to 52 ka. Above this, sediment deposition and entrainment of paleontological materials are representative of Pleistocene and early Holocene times, between 37 ± 6 ka and 7.6 ± 0.5 ka. The stratigraphic architecture suggests that deposition of materials into the cave is episodic and rapid, followed by quiescent periods where hydrologic scour, heavy overland flow , or possibly a cryo-hydrologic process may have altered unit relationships. Thus, the complementary geochronometers and the characteristics of quartz versus feldspar luminescence signals improve temporal interpretations of these complex deposits. This adapted understanding of mixing also sets the stage for future work with the aim to improve our understanding of ages and sources for ash units within these cave deposits. The three ash units recognized in the cave may represent an in-situ reworking of the same ash or may be representative of previously undocumented eruptions from the Yellowstone Caldera.

Wyoming↗
USGS2001

Ecotoxicology of Wild Mammals

An international group of 32 scientists has critically reviewed the scientific literature on exposure and effects of environmental contaminants in wild mammals. The underlying theme of this text is encompassed by the following four questions: What exactly do we know about environmental contaminants in mammals? What are the commonalities and differences between mammal orders/species in the effects that contaminants have? How and to what degree of accuracy can we predict the adverse effects of environmental contaminants on mammalian wildlife? How significant are contaminant insults compared with other density-independent and -dependent factors such as habitat loss, climatic factors and disease? The book is organized three topical sections including introductory chapters that provide a background on environmental contaminants and the mammalian orders, eight taxonomic chapters discussing all aspects of the exposure to and effects of contaminants in mammalian orders, and four thematic chapters that review and discuss generic issues including biomarkers, prediction and extrapolation of exposure and effects, hazard and risk assessment, and the relative significance of contaminants on mammals compared with other commonly encountered stressors. A final a summary chapter identifies phylogenetic trends, critical data gaps, and overarching research needs. Although the absolute number of toxicological studies in domesticated and wild mammals eclipses that wildlife species, a detailed examination of our knowledge base reveals that information for 'wild' birds is actually greater than that for 'wild' mammals. Of the various mammalian taxa, ecotoxicological data is most noticeably lacking for marsupials and monotremes. In contrast, rodents (comprising 43% of all mammal species) have been studied extensively, despite evidence of their tolerance to some organochlorine compounds, rodenticides, and even radionuclides. Mammalian species at greatest risk of exposure include those that consume a high percentage of their body weight on a daily basis. Aquatic mammals tend to bioaccumulate tremendous burdens of lipophilic contaminants, although storage in their fat depots may actually limit toxicity. Carnivores appear to be more sensitive to adverse effects of environmental contaminants than herbivores. Remarkably few of the thousands of compounds manufactured worldwide have been toxicologically evaluated in wild mammals, and concentrations of even fewer have been monitored in tissues.

Ecological & Environmental Toxicology Series.↗