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U.S. Geological Survey Science for the Wyoming Landscape Conservation Initiative-2009 Annual Report
This is the second report produced by the U.S. Geological Survey (USGS) for the Wyoming Landscape Conservation Initiative (WLCI) to detail annual work activities. The first report described work activities for 2007 and 2008; this report covers work activities conducted in 2009. Important differences between the two reports are that (1) this report does not lump all the Effectiveness Monitoring activities together as last year's report did, which will allow WLCI partners and other readers to fully appreciate the scope and accomplishments of those activities, and (2) this report does not include a comprehensive appendix of the background details for each work activity. In 2009, there were 29 ongoing or completed activities, and there were 5 new work activities conducted under the 5 original major multi-disciplinary science and technical assistance activities: (1) Baseline Synthesis; (2) Targeted Monitoring and Research; (3) Data and Information Management; (4) Integration and Coordination; and (5) Decisionmaking and Evaluation. New work included (1) developing a soil-quality index, (2) developing methods for assessing levels of and relationships between mercury and soil organic matter, and (3) ascertaining element source, mobility, and fate. Additionally, (4) remotely sensed imagery was used to assess vegetation as an indicator of soil condition and geology, and (5) an Integrated Assessment (IA) was initiated to synthesize what has been learned about WLCI systems to date, and to develop associated decision tools, maps, and a comprehensive report.
Chemical analysis and modes of occurrence of selected trace elements in a Powder River basin coal and its corresponding simulated cleaned coal
This report provides semi-quantitative data on modes of occurrence of 19 elements in as-mined Powder River Basin coal and its corresponding simulated cleaned coal. The data are in support of the project "Prediction of Trace Element Removal from Coal" --a Cooperative Research and Development Agreement (CRADA) with CQ Inc. The purpose of this CRADA is to apply modes of occurrence information to coal cleaning procedures. Techniques used in this study include sequential selective leaching procedures, scanning electron microscopy, X-ray diffraction analysis, and electron microprobe analysis. Selective leaching results indicate that greater than 40 percent of the elements Co, U, Be, Ca, Fe, Mn, Ba, Zn, Cd, Pb are associated with HCIsoluble carbonates, iron oxides, or monosulfides, greater than 40 percent of the Al, Cr and Mo are associated with HF-soluble silicates, greater than 40 percent of the Ni, Cu, As and Sb are associated with acid-insoluble phases and/or organic matter, and greater than 50 percent of the Hg is associated with HMDs-soluble pyrite. Thirty percent of the Th was leached by HCI and 30 percent of this element was leached by HF. Scanning electron microscopy indicates that quartz, kaolinite, illite and iron oxide, possibly hematite, are the major minerals present. X-ray diffraction analysis confirmed that quartz, kaolinite and hematite are present, but did not determine illite, indicating that illite in these coals is of low abundance or is poorly crystalline. Electron microprobe data indicate that concentrations of the chalcophile elements As, Se, Cu, Ni, Zn, and Cd in most pyrite grains are at or below the detection limit of about 100-200 ppm in both the as-mined coal and its corresponding simulated cleaned coal product. The results of this project should aid in the development of models for predicting the response of potentially toxic trace elements in commercial coal cleaning procedures.
Detecting algal toxins and organic contaminants of concern in the environment
The U.S. Geological Survey (USGS) Kansas Water Science Center Organic Geochemistry Research Laboratory (OGRL) was established in 1987. The OGRL is a multidisciplinary program that contributes knowledge about the distribution, fate, transport, and effects of new and understudied organic compounds that may affect human health and (or) ecosystems. The OGRL consists of two units: Algal and Other Environmental Toxins Unit and Environmental Organic Chemistry Unit. The OGRL does independent and collaborative research, develops robust analytical methods, and provides fee-for-service analytical laboratory analyses.
Mangrove postcard
Mangrove ecosystems protect vulnerable coastlines from storm effects, recycle nutrients, stabilize shorelines, improve water quality, and provide habitat for commercial and recreational fish species as well as for threatened and endangered wildlife. U.S. Geological Survey scientists conduct research on mangrove ecosystems to provide reliable scientific information about their ecology, productivity, hydrological processes, carbon storage stress response, and restoration success. The Mangrove Science Network is a collaboration of USGS scientists focused on working with natural resource managers to develop and conduct research to inform decisions on mangrove management and restoration. Information about the Mangrove Science Network can be found at: http://www.usgs.gov/ecosystems/environments/mangroves.html .
Cyanobacterial harmful algal blooms and U.S. Geological Survey science capabilities
Cyanobacterial harmful algal blooms (CyanoHABs) are increasingly a global concern because CyanoHABs pose a threat to human and aquatic ecosystem health and cause economic damages. Despite advances in scientific understanding of cyanobacteria and associated compounds, many unanswered questions remain about occurrence, environmental triggers for toxicity, and the ability to predict the timing, duration, and toxicity of CyanoHABs. U.S. Geological Survey (USGS) scientists are leading a diverse range of studies to address CyanoHAB issues in water bodies throughout the United States, using a combination of traditional methods and emerging technologies, and in collaboration with numerous partners. By providing practical applications of cutting edge CyanoHAB research, USGS studies have advanced scientific understanding, enabling the development of approaches to help protect ecological and human health.
Analytical method codes and descriptions for well and outcrop samples: Eastern Gas Shales Project data system
The United States Geological Survey and Petroleum Information Corporation (PI) of Denver have created a large computerized file of sample data for the Eastern Gas Shales Project (EGSP) as a responsibility to the U.S. Department of Energy (DOE), Morgantown Energy Technology Center (METC), Morgantown, West Virginia. The EGSP was initiated in 1976 by METC to investigate gas resources in Devonian shales found in the Appalachian basin. An objective of the EGSP is to accumulate a data base characterizing these shale units which can be used to assess future development of the gas resource. More than 30 government and industry participants served as contractors and contributed data from their research.
Integrating authentic scientific research in a conservation course–based undergraduate research experience
Course-based undergraduate research experiences (CUREs) have been developed to overcome barriers including students in research. However, there are few examples of CUREs that take place in a conservation and natural resource context with students engaging in field research. Here, we highlight the development of a conservation-focused CURE integrated to a research program, research benefits, student self-assessment of learning, and perception of the CURE. With the additional data, researchers were able to refine species distribution models and facilitate management decisions. Most students reported gains in their scientific skills, felt they had engaged in meaningful, real-world research. In student reflections on how this experience helped clarify their professional intentions, many reported being more likely to enroll in graduate programs and seek employment related to science. Also interesting was all students reported being more likely to talk with friends, family, or the public about wildlife conservation issues after participating, indicating that courses like this can have effects beyond the classroom, empowering students to be advocates and translators of science. Field-based, conservation-focused CUREs can create meaningful conservation and natural resource experiences with authentic scientific teaching practices.
Multipurpose Wetlands Phase II/III: final design and ongoing research investigations
The Eastern Municipal Water District (EMWD), the Bureau of Reclamation (USBR), and the National Biological Survey (NBS), in consultation with other governmental agencies, the academic community, and environmental groups, are involved in a cooperative wetlands research and demonstration effort. This report reflects progress through the first 3 years of a 5-year program. The goal of the Multipurpose Wetlands Research and Demonstration Project is to evaluate and expand the use of reclaimed water and contaminated ground water through the incorporation of multipurpose constructed wetlands into EMWD's total water resources management program. The focus of the wetlands is the development of design, construction, and operation criteria that will provide a cost-effective and innovative alternative for managing water resources and provide other public benefits in arid areas. The program also recognizes the fact that naturally-occurring wetlands, both coastal and inland, have been disappearing at an alarming rate.
Test and calibration of the Digital World-Wide Standardized Seismograph
During the past decade there has been steady progress in the modernization of the global seismograph network operated by the U.S. Geological Survey (USGS). The World-Wide Standardized Seismograph Network (WWSSN) has been augmented by new stations with advanced instrumentation, including the Seismic Research Observatories (SRO) and the modified High-Gain Long-Period (ASRO) stations. One goal in the modernization effort has been to improve signal resolution in the long-period band. A second goal has been to generate a global digital data base to support contemporary computer-based analysis and research. In 1976, a Panel on Seismograph Networks was established by the Committee on Seismology of the National Academy of Sciences to review progress in network seismology and recommend actions that would lead to an improved global data base for seismology. One recommendation in the Panel report (Engdahl, 1977) called for upgrading selected WWSSN stations by the installation of digital recorders. This was viewed as an economical way of expanding the digital network, which had proven itself to be a very promising new tool for earthquake and explosion research. Funds for the development and assembly of 15 digital recorders were provided to the USGS by the Defense Advanced Research Projects Agency and an ad Inoc panel of scientists was convened by the Committee on Seismology to advise the USGS on the selection of stations to be upgraded and on data recording requirements, A total of 19 digital World-Wide Standardized Seismograph (DWWSS) systems will be operational when all are installed. The additional systems were made available through purchase by the USGS and other organizations; for example, the University of Bergen purchased and installed a DWWSS-type recorder and agreed to furnish the USGS with the data. A list of operational and planned DWWSS network stations is given in Table 1.1. As one might expect, the digital recorder turned out to be somewhat more sophisticated than the original concept. It was decided to record three components of long-period data continuously, three components of intermediateperiod data in an event mode, and the vertical-component short-period data in and event mode (with the capability of adding short-period horizontal channels in the future). Special amplifiers were developed for use with the WWSS seismometers, and a 16-bit fixed-point analog-to-digital converter was chosen to provide increased resolution (as opposed to a 16-bit gain-ranged encoder). The microprocessor-based digital recording systems were developed and assembled at the USGS Albuquerque Seismological Laboratory (ASL) and ASL-based technicians began installation at WWSSN stations in 1980. The current and proposed locations of the DWWSSN stations, together with other stations in the Global Digital Seismograph Network (GDSN), are shown on the map in Figure 1.1. A system was operated at Albuquerque for about 18 months, serving as a test bed for evaluation studies. Although the network hardware has been available for some time, the installation of the DWWSSN has proceeded slowly. The National Science Foundation supported installation of six stations and the USGS is funding installation of most of the others; however, the network completion date is conjectural because of funding uncertainties. The DWWSSN stations are supported with supplies and technical assistance from ASL (subject to availability of funds). Data recorded on magnetic tapes are mailed to ASL where they are reviewed for quality, then merged with other GDSN station data on the network-day tapes. Hoffman (1980) provides a description of the network-day tape format. Zirbes and Buland (1981) have developed and published user software for reading and interpreting the day tapes. This report will serve several purposes. One is to provide nominal system transfer functions and calibration information that are needed in the analysis of DWWSSN data. A second purpose is to report on an evaluation of operating characteristics (calibration stability, noise levels, and linearity) that may limit the usefulness of the data and to determine if modifications may be needed to improve the data. It is not an exhaustive study in this respect. We continue to depend mostly on data user feedback to point out deficiencies and we solicit comments whenever anomalies are observed in the data.
Surface water investigations in Afghanistan: a summary of activities from 1952 to 1969
The purpose of this report is to summarize briefly the history of the Surface Water Research project since its inception in 1952, the work accomplished, and the problems encountered. In general, each topic is discussed under two periods of time: 1952-1963, when projects were confined to the Helmand River Valley and was entitled Helmand Surface Water Investigations (306-12-021, 306-M-12-AD and 306-AC-12-AD5), and 1963-1969 when activities were expanded to cover most of Afghanistan and title was changed to Surface Water Research (306-11-190-002). Prepared by the United States Geological Survey in cooperation with the Water and Soil Survey Department, Ministry of Agriculture and Irrigation, Royal Government of Afghanistan under the auspices of the United States Agency for International Development.
U.S. Geological Survey (USGS) Earth Resources Observation and Science (EROS) Center-fiscal year 2010 annual report
The Earth Resources Observation and Science (EROS) Center is a U.S. Geological Survey (USGS) facility focused on providing science and imagery to better understand our Earth. The work of the Center is shaped by the earth sciences, the missions of our stakeholders, and implemented through strong program and project management, and application of state-of-the-art information technologies. Fundamentally, EROS contributes to the understanding of a changing Earth through 'research to operations' activities that include developing, implementing, and operating remote-sensing-based terrestrial monitoring capabilities needed to address interdisciplinary science and applications objectives at all levels-both nationally and internationally. The Center's programs and projects continually strive to meet, and where possible exceed, the changing needs of the USGS, the Department of the Interior, our Nation, and international constituents. The Center's multidisciplinary staff uses their unique expertise in remote sensing science and technologies to conduct basic and applied research, data acquisition, systems engineering, information access and management, and archive preservation to address the Nation's most critical needs. Of particular note is the role of EROS as the primary provider of Landsat data, the longest comprehensive global land Earth observation record ever collected. This report is intended to provide an overview of the scientific and engineering achievements and illustrate the range and scope of the activities and accomplishments at EROS throughout fiscal year (FY) 2010. Additional information concerning the scientific, engineering, and operational achievements can be obtained from the scientific papers and other documents published by EROS staff or by visiting our web site at http://eros.usgs.gov. We welcome comments and follow-up questions on any aspect of this Annual Report and invite any of our customers or partners to contact us at their convenience. To communicate with us, or for more information about EROS, contact: Communications and Outreach, USGS EROS Center, 47914 252nd Street, Sioux Falls, South Dakota 57198, jsnelson@usgs.gov, http://eros.usgs.gov/.
Perceptions of species abundance, distribution, and diversity: Lessons from four decades of sampling on a government-managed reserve
We examined data relative to species abundance, distribution, and diversity patterns of reptiles and amphibians to determine how perceptions change over time and with level of sampling effort. Location data were compiled on more than one million individual captures or observations of 98 species during a 44-year study period on the US Department of Energy’s (DOE) Savannah River Site National Environmental Research Park (SRS-NERP) in South Carolina. We suggest that perceptions of herpetofaunal species diversity are strongly dependent on level of effort and that land management decisions based on short-term data bases for some faunal groups could result in serious errors in environmental management. We provide evidence that acquiring information on biodiversity distribution patterns is compatible with multiyear spatially extensive research programs and also provide a perspective of what might be achieved if long-term, coordinated research efforts were instituted nationwide. To conduct biotic surveys on government-managed lands, we recommend revisions in the methods used by government agencies to acquire and report biodiversity data. We suggest that government and industry employees engaged in biodiversity survey efforts develop proficiency in field identification for one or more major taxonomic groups and be encouraged to measure the status of populations quantitatively with consistent and reliable methodologies. We also suggest that widespread academic cooperation in the dissemination of information on regional patterns of biodiversity could result by establishment of a peer-reviewed, scientifically rigorous journal concerned with status and trends of the biota of the United States.
Fort Collins Science Center: science accomplishments for fiscal years 2012 and 2013
The Fort Collins Science Center (FORT) is a multi-disciplinary research and development center of the U.S. Geological Survey (USGS) located in Fort Collins, Colorado. Organizationally, FORT is within the USGS Southwest Region, although our work extends across the Nation and into several other countries. FORT research focuses on needs of the land- and water-management bureaus within the U.S. Department of the Interior (DOI), other Federal agencies, and those of State and non-government organizations. As a Science Center, we emphasize a multi-disciplinary science approach to provide information for resource-management decisionmaking. FORT’s vision is to maintain and continuously improve the integrated, collaborative, world-class research needed to inform effective, science-based land and resource management. Our science and technological development activities and unique capabilities support all USGS scientific Mission Areas and contribute to successful, collaborative science efforts across the USGS and DOI. We organized our report into an Executive Summary, a cross-reference table, and an appendix. The executive summary provides brief highlights of some key FORT accomplishments for each Mission Area. The table cross-references all major FY2012 and FY2013 science accomplishments with the various Mission Areas that each supports. The one-page accomplishment descriptions in the appendix are organized by USGS Mission Area and describe the many and diverse ways in which our science is applied to resource issues. As in prior years, lists of all FY2012 and FY2013 publications and other product types also are appended.
Forest bird monitoring protocol for strategic habitat conservation and endangered species management on O'ahu Forest National Wildlife Refuge, Island of O'ahu, Hawai'i
This report describes the results of a pilot forest bird survey and a consequent forest bird monitoring protocol that was developed for the O'ahu Forest National Wildlife Refuge, O'ahu Island, Hawai'i. The pilot survey was conducted to inform aspects of the monitoring protocol and to provide a baseline with which to compare future surveys on the Refuge. The protocol was developed in an adaptive management framework to track bird distribution and abundance and to meet the strategic habitat conservation requirements of the Refuge. Funding for this research was provided through a Science Support Partnership grant sponsored jointly by the U.S. Geological Survey (USGS) and the U.S. Fish and Wildlife Service (USFWS).
Using the FORE-SCE model to project land-cover change in the southeastern United States
A wide variety of ecological applications require spatially explicit current and projected land-use and land-cover data. The southeastern United States has experienced massive land-use change since European settlement and continues to experience extremely high rates of forest cutting, significant urban development, and changes in agricultural land use. Forest-cover patterns and structure are projected to change dramatically in the southeastern United States in the next 50 years due to population growth and demand for wood products [Wear, D.N., Greis, J.G. (Eds.), 2002. Southern Forest Resource Assessment. General Technical Report SRS-53. U.S. Department of Agriculture, Forest Service, Southern Research Station, Asheville, NC, 635 pp]. Along with our climate partners, we are examining the potential effects of southeastern U.S. land-cover change on regional climate. The U.S. Geological Survey (USGS) Land Cover Trends project is analyzing contemporary (1973-2000) land-cover change in the conterminous United States, providing ecoregion-by-ecoregion estimates of the rates of change, descriptive transition matrices, and changes in landscape metrics. The FORecasting SCEnarios of future land-cover (FORE-SCE) model used Land Cover Trends data and theoretical, statistical, and deterministic modeling techniques to project future land-cover change through 2050 for the southeastern United States. Prescriptions for future proportions of land cover for this application were provided by ecoregion-based extrapolations of historical change. Logistic regression was used to develop relationships between suspected drivers of land-cover change and land cover, resulting in the development of probability-of-occurrence surfaces for each unique land-cover type. Forest stand age was initially established with Forest Inventory and Analysis (FIA) data and tracked through model iterations. The spatial allocation procedure placed patches of new land cover on the landscape until the scenario prescriptions were met, using measured Land Cover Trends data to guide patch characteristics and the probability surfaces to guide placement. The approach provides an efficient method for extrapolating historical land-cover trends and is amenable to the incorporation of more detailed and focused studies for the establishment of scenario prescriptions.