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Sustainability trade-offs at the nexus of solar energy, agriculture, and biodiversity

A rapid transition to renewable energy is necessary for achieving global decarbonization targets, but siting conflicts, particularly beyond the built environment, remain a key barrier to sustainable development. At the same time, climate-induced pressures on biodiversity intensify the socio-ecological trade-offs within the energy-agriculture-biodiversity nexus. Using New York State as a case study, we assess the geographic implications of utility-scale solar energy development under competing land-use priorities. We apply a mixed-integer linear programming (MILP) optimization model to evaluate solar buildout across three distinct scenarios: minimizing cost, prioritizing agricultural preservation, and conserving biodiversity, employing a lexicographic hierarchy to enforce a strict ordering of stakeholder priorities. Results indicate that New York can meet its mid-century decarbonization goals by deploying 46,216 MW dc of solar energy, however, achieving this goal involves considerable land-use trade-offs. A cost-minimizing scenario disproportionately targets pasture and hay lands (>40,000 ha), nearly half of which overlap with grassland bird habitat and broader biodiversity areas. Prioritizing agriculture spares ∼80 % of farmland but creates potential for deforestation of over 41,000 ha. Biodiversity-conscious siting avoids ecologically sensitive areas and increases the annualized total costs by 0.17 %, indicating economic feasibility. Our findings highlight the need for spatially informed, integrative land-use strategies that reconcile climate goals with ecological and agricultural values. By linking geospatial optimization with socio-ecological criteria, this work contributes a transferable framework to inform just and ecologically responsible energy transitions in multifunctional landscapes, offering new insights into how geography can advance sustainable development.

New York

Multi-temporal LiDAR and Landsat quantification of fire-induced changes to forest structure

Measuring post-fire effects at landscape scales is critical to an ecological understanding of wildfire effects. Predominantly this is accomplished with either multi-spectral remote sensing data or through ground-based field sampling plots. While these methods are important, field data is usually limited to opportunistic post-fire observations, and spectral data often lacks validation with specific variables of change. Additional uncertainty remains regarding how best to account for environmental variables influencing fire effects (e.g., weather) for which observational data cannot easily be acquired, and whether pre-fire agents of change such as bark beetle and timber harvest impact model accuracy. This study quantifies wildfire effects by correlating changes in forest structure derived from multi-temporal Light Detection and Ranging (LiDAR) acquisitions to multi-temporal spectral changes captured by the Landsat Thematic Mapper and Operational Land Imager for the 2012 Pole Creek Fire in central Oregon. Spatial regression modeling was assessed as a methodology to account for spatial autocorrelation, and model consistency was quantified across areas impacted by pre-fire mountain pine beetle and timber harvest. The strongest relationship (pseudo-r 2 = 0.86, p < 0.0001) was observed between the ratio of shortwave infrared and near infrared reflectance (d74) and LiDAR-derived estimate of canopy cover change. Relationships between percentage of LiDAR returns in forest strata and spectral indices generally increased in strength with strata height. Structural measurements made closer to the ground were not well correlated. The spatial regression approach improved all relationships, demonstrating its utility, but model performance declined across pre-fire agents of change, suggesting that such studies should stratify by pre-fire forest condition. This study establishes that spectral indices such as d74 and dNBR are most sensitive to wildfire-caused structural changes such as reduction in canopy cover and perform best when that structure has not been reduced pre-fire.

Oregon

Projected changes of regional lake hydrologic characteristics in response to 21st century climate change

Inland lakes are socially and ecologically important components of many regional landscapes. Exploring lake responses to plausible future climate scenarios can provide important information needed to inform stakeholders of likely effects of hydrologic changes on these waterbodies in coming decades. To assess potential climate effects on lake hydrology, we combined a previously published spatially explicit, processed-based hydrologic modeling framework implemented over the lake-rich landscape of the Northern Highlands Lake District within the United States with an ensemble of climate change scenarios for the 2050s (2041–2070) and 2080s (2071–2100). Model results quantify the effects of climate change on water budgets and lake stage elevations for 3692 lakes and highlight the importance of landscape and hydrologic setting for the response of specific lake types to climate change. All future climate projections resulted in loss of ice cover and snowpack as well as increased evaporation, but variability in climate projections (warmer conditions, wet winters combined with wet or dry summers) interacted with lake characteristics and landscape position to produce variable lake hydrologic changes. Water levels for drainage lakes (lakes with substantial surface water inflows and outflows) showed nearly no change, whereas minimum water levels for seepage lakes (minimal surface water fluxes) decreased by an average of up to 2.64 m by the end of the 21st century. Our physically based modeling approach is parsimonious and computationally efficient and can be applied to other lake-rich regions to investigate interregional variability in lake hydrologic response to future climate scenarios.

Michigan, Wisconsin

Projecting the long-term effects of large-scale human influence on the spatial and functional persistence of extant longleaf pine ecosystems in the Florida Flatwoods Pyrome

Decades of human activities and fire suppression have adversely affected longleaf pine ( Pinus palustris ) ecosystems, which are home to high levels of diversity and endemism. These iconic ecosystems also now face challenges from urbanization and climate change, which will alter conservation outcomes over the remainder of the 21st century. To explore how long-term, large-scale human influences could affect the spatial and functional persistence of extant longleaf pine ecosystems in the Florida Flatwoods Pyrome, we extracted a set of 2400 longleaf pine patches ≥40 ha in size from the Florida Longleaf Pine Ecosystem Geodatabase. Projections from the FUTURES urban growth model and the Florida 2070 project indicate that development will lead to losses of existing longleaf pine habitat, reductions in longleaf pine patch size, and patches that are predominantly located in close proximity to developed areas. Finer-scale patterns of longleaf pine loss in three focal landscapes highlighted differences in land protection, ecological setting, and development pressure and the value of using of multiple urbanization iterations. The occurrence of suitable conditions to conduct prescribed fires, a crucial tool for maintaining, improving, and restoring longleaf pine ecosystems, is projected to decrease seasonally throughout the study area. As a result, the functional persistence of ecosystems is at risk due to climate changes that increase barriers to the safe and reliable application of intentional fire. The long-term viability of this critical ecosystem will warrant the evaluation of adaptive strategies that explicitly account for the individual and compounding effects of urban development and changing fire management conditions when considering options for ecosystem protection, management, and restoration.

Florida

A conceptual framework and methods for studying the connectivity of fishes

Connectivity is a multifaceted concept that has important implications for the management and conservation of marine and freshwater fishes. We developed a conceptual framework that encompasses multiple, interrelated categories of connectedness, including landscape (e.g., structural, functional) connectivity and ecological (e.g., trophic, genetic, demographic) connectivity, that together shape the flow of organisms, energy and information across ecosystems. We also synthesised six key methods that can be used to study connectivity of fishes: (1) telemetry, including satellite, acoustic, radio and passive integrated transponders (PIT), (2) mark-recapture, (3) environmental tracers, including stable isotopes and otolith-microchemistry, (4) genetics, (5) community structure analysis and (6) emerging technologies and tools (e.g., remote sensing and artificial intelligence). For each method, we describe the categories of connectivity it can assess and provide real-world examples where they have been effectively used. We also identify limitations of each method. This article highlights the diverse and evolving toolbox of methods used to assess fish connectivity, underscoring the need for continued collaboration, innovation and integration of new approaches to refine our understanding and address remaining challenges in this critical area of aquatic ecology and fisheries management.

Fish and Fisheries

Shifting brucellosis risk in livestock coincides with spreading seroprevalence in elk

Tracking and preventing the spillover of disease from wildlife to livestock can be difficult when rare outbreaks occur across large landscapes. In these cases, broad scale ecological studies could help identify risk factors and patterns of risk to inform management and reduce incidence of disease. Between 2002 and 2014, 21 livestock herds in the Greater Yellowstone Area (GYA) were affected by brucellosis, a bacterial disease caused by Brucella abortus , while no affected herds were detected between 1990 and 2001. Using a Bayesian analysis, we examined several ecological covariates that may be associated with affected livestock herds across the region. We showed that livestock risk has been increasing over time and expanding outward from the historical nexus of brucellosis in wild elk on Wyoming’s feeding grounds where elk are supplementally fed during the winter. Although elk were the presumed source of cattle infections, occurrences of affected livestock herds were only weakly associated with the density of seropositive elk across the GYA. However, the shift in livestock risk did coincide with recent increases in brucellosis seroprevalence in unfed elk populations. As increasing brucellosis in unfed elk likely stemmed from high levels of the disease in fed elk, disease-related costs of feeding elk have probably been incurred across the entire GYA, rather than solely around the feeding grounds. Our results suggest that focused disease mitigation in areas where seroprevalence in unfed elk is high could reduce the spillover of brucellosis to livestock. We also highlight the need to better understand the epidemiology of spillover events with detailed histories of disease testing, calving, and movement of infected livestock. Finally, we recommend using case-control studies to investigate local factors important to livestock risk.

Idaho, Montana, Utah, Wyoming

Ecology and conservation of a rare, old-growth-associated canopy lichen in a silvicultural landscape

Nephroma occultum Wetm. is a rare, epiphytic lichen associated with old-growth forests of northwestern North America. We describe its distribution, abundance, and habitat within the managed landscape of a southwestern Oregon watershed. Because this species is found mainly in the canopy, we used direct canopy access (tree climbing) in combination with ground (litter) searches for our surveys. We recommend this dual approach when confident determination of presence or absence of a canopy species is needed. Our surveys confirm that N. occultum is a rare old-growth associate within the area of this study, the southernmost extension of its known range. It was both rare across the landscape and uncommon in our primary study site, a 500 yr old stand. It was most often found growing close to the trunk on branches of large Pseudotsuga menziesii , but its distribution was sporadic even within an old-growth stand. The scarcity of very old stands, in combination with the limited ability of this species to disperse within and between stands, has likely contributed to its rarity within the watershed. Management for N. occultum should focus on populations and habitat needs rather than on individuals. Our calculations show that cutting with retention of individual trees surrounded by small buffers could result in the eventual loss of N. occultum from the study area.

Oregon

Home-range size and habitat used by the northern myotis (Myotis septentrionalis)

We examined home range size and habitat use of nine female northern myotis ( Myotis septentrionalis ) within an intensively managed forest in the central Appalachians of West Virginia. Using the 95% adaptive kernel method, we calculated a mean home range of 65 ha. Northern myotis used recent diameter-limit harvests and road corridors more than expected based on availability of these habitats. Intact forest stands and more open deferment harvested stands were used less than expected based on the availability of these habitats, although intact forest stands still constituted the overall majority of habitat used. Partial timber harvests that leave a relatively closed canopy appear to promote or improve northern myotis foraging habitat in heavily forested landscapes. However, the long-term ecological impacts on bats and other biota from this silviculturally unacceptable practice are unclear.

American Midland Naturalist

Avalanche ecology and large magnitude avalanche events: Glacier National Park, Montana, USA

Large magnitude snow avalanches play an important role ecologically in terms of wildlife habitat, vegetation diversity, and sediment transport within a watershed. Ecological effects from these infrequent avalanches can last for decades. Understanding the frequency of such large magnitude avalanches is also critical to avalanche forecasting for the Going-to-the-Sun Road (GTSR). In January 2009, a large magnitude avalanche cycle occurred in and around Glacier National Park, Montana. The study site is the Little Granite avalanche path located along the GTSR. The study is designed to quantify change in vegetative cover immediately after a large magnitude event and document ecological response over a multi-year period. GPS field mapping was completed to determine the redefined perimeter of the avalanche path. Vegetation was inventoried using modified U.S. Forest Service Forest Inventory and Analysis plots, cross sections were taken from over 100 dead trees throughout the avalanche path, and an avalanche chronology was developed. Initial results indicate that the perimeter of this path was expanded by 30%. The avalanche travelled approximately 1200 vertical meters and 3 linear kilometers. Stands of large conifers as old as 150 years were decimated by the avalanche, causing a shift in dominant vegetation types in many parts of the avalanche path. Woody debris is a major ground cover up to 3 m in depth on lower portions of the avalanche path and will likely affect tree regrowth. Monitoring and measuring the post-avalanche vegetation recovery of this particular avalanche path provides a unique dataset for determining the ecological role of avalanches in mountain landscapes.

Montana

Population ecology of variegate darter (Etheostoma variatum) in Virginia

Variegate darters ( Etheostoma variatum ) were listed as endangered in Virginia in 1992. Reasons for listing included habitat degradation and concerns about current and future impacts of coal mining throughout their Virginia range. Prior to this research, little was known about variegate darter distribution, habitat use, or populations in Virginia. Two primary goals of this research were to gain knowledge about the current population ecology and the relationship between landscape-level factors (e.g., land cover changes, watershed size, isolation from other populations) on current and past variegate darter population sizes. We investigated distribution, habitat suitability, population genetics, and population size and structure of variegate darters in the upper Big Sandy River drainage, Buchanan, Dickenson, and Wise Co., Virginia. Our results indicate variegate darters are primarily found in the Levisa Fork, with highest densities and abundances between its confluence with Dismal Creek and the Virginia-Kentucky border. Sporadic occurrences in smaller tributaries to the Levisa and Tug forks indicate they exist more widely in low densities, especially near the confluence with the Tug and Levisa mainstems. Detection of variegate darters in smaller tributaries was inconsistent, with reach-level occupancy estimates varying among years. We detected young-of-year variegate darters every year we sampled, but age 1 + darters were indistinguishable from older darters based on standard length. Variegate darter population size and stability in Virginia were estimated via multiple methods, including site occupancy surveys, mark-recapture studies, and population genetic analysis. Using mark-recapture methods at five sites, we estimated overall population size in 2011 to be approximately 12,800 individuals in the 35-km reach between the Levisa Fork - Dismal Creek confluence and the Virginia-Kentucky border. Age structure seemed stable, with breeding adults and young-of-year collected annually during 2008-2011. Population genetic analysis indicated variegate darters in the Levisa Fork and its tributaries are part of a single genetic population. Historical and current genetic stability were seen in our analysis of the variegate darter population, with no genetic differentiation among riffles across the upper Levisa Fork watershed, indicating dispersal among these sites is enough to overcome random genetic drift. This population is genetically isolated from downstream populations by the dam at Fishtrap Lake, Pike Co., Kentucky, and is beginning to show genetic isolation from other nearby populations. As expected, the Virginia population is most closely related to those in the Russell Fork and Levisa Fork downstream of the dam. Regular monitoring of variegate darters in the Levisa Fork mainstem from the Dismal Creek confluence to the Virginia-Kentucky border would facilitate better understanding of normal fluctuations of population size and distribution, as well as assessments of population status. This reach encompasses the core of the variegate darter population in Virginia, and its persistence will determine long-term viability of this species. Given that little is known about long-term population trends, we suggest that annual site-occupancy and population size estimates be made at ten randomly selected riffles for at least ten years to understand normal levels of variability. Thereafter, these population parameters could be monitored bi-annually as a way to detect shrinking distribution or abundance, especially after any fish kill or other pollution event in the Levisa Fork. We further suggest that the sites upstream and downstream of the saline diffusor pipe be monitored to detect changes in the extent of the impact zone. Overall, the variegate darter population in Virginia appears stable, although primarily confined to the lower 35 km of the Levisa Fork. Nevertheless, variegate darters in Virginia remain susceptible to extirpation due to catastrophic events, both physical (chemical spill) and biological (disease outbreak or invasive species introduction).

Virginia, West Virginia

Estimating population density and connectivity of American mink using spatial capture-recapture

Estimating the abundance or density of populations is fundamental to the conservation and management of species, and as landscapes become more fragmented, maintaining landscape connectivity has become one of the most important challenges for biodiversity conservation. Yet these two issues have never been formally integrated together in a model that simultaneously models abundance while accounting for connectivity of a landscape. We demonstrate an application of using capture&ndash;recapture to develop a model of animal density using a least-cost path model for individual encounter probability that accounts for non-Euclidean connectivity in a highly structured network. We utilized scat detection dogs ( Canis lupus familiaris ) as a means of collecting non-invasive genetic samples of American mink ( Neovison vison ) individuals and used spatial capture&ndash;recapture models (SCR) to gain inferences about mink population density and connectivity. Density of mink was not constant across the landscape, but rather increased with increasing distance from city, town, or village centers, and mink activity was associated with water. The SCR model allowed us to estimate the density and spatial distribution of individuals across a 388 km 2 area. The model was used to investigate patterns of space usage and to evaluate covariate effects on encounter probabilities, including differences between sexes. This study provides an application of capture&ndash;recapture models based on ecological distance, allowing us to directly estimate landscape connectivity. This approach should be widely applicable to provide simultaneous direct estimates of density, space usage, and landscape connectivity for many species.

Ecological Applications

Gap analysis: Concepts, methods, and recent results

Rapid progress is being made in the conceptual, technical, and organizational requirements for generating synoptic multi-scale views of the earth's surface and its biological content. Using the spatially comprehensive data that are now available, researchers, land managers, and land-use planners can, for the first time, quantitatively place landscape units - from general categories such as 'Forests' or 'Cold-Deciduous Shrubland Formation' to more categories such as 'Picea glauca-Abies balsamea-Populus spp. Forest Alliance' - in their large-area contexts. The National Gap Analysis Program (GAP) has developed the technical and organizational capabilities necessary for the regular production and analysis of such information. This paper provides a brief overview of concepts and methods as well as some recent results from the GAP projects. Clearly, new frameworks for biogeographic information and organizational cooperation are needed if we are to have any hope of documenting the full range of species occurrences and ecological processes in ways meaningful to their management. The GAP experience provides one model for achieving these new frameworks.

Landscape Ecology

Landscape genetic approaches to guide native plant restoration in the Mojave Desert

Restoring dryland ecosystems is a global challenge due to synergistic drivers of disturbance coupled with unpredictable environmental conditions. Dryland plant species have evolved complex life-history strategies to cope with fluctuating resources and climatic extremes. Although rarely quantified, local adaptation is likely widespread among these species and potentially influences restoration outcomes. The common practice of reintroducing propagules to restore dryland ecosystems, often across large spatial scales, compels evaluation of adaptive divergence within these species. Such evaluations are critical to understanding the consequences of large-scale manipulation of gene flow and to predicting success of restoration efforts. However, genetic information for species of interest can be difficult and expensive to obtain through traditional common garden experiments. Recent advances in landscape genetics offer marker-based approaches for identifying environmental drivers of adaptive genetic variability in non-model species, but tools are still needed to link these approaches with practical aspects of ecological restoration. Here, we combine spatially-explicit landscape genetics models with flexible visualization tools to demonstrate how cost-effective evaluations of adaptive genetic divergence can facilitate implementation of different seed sourcing strategies in ecological restoration. We apply these methods to Amplified Fragment Length Polymorphism (AFLP) markers genotyped in two Mojave Desert shrub species of high restoration importance: the long-lived, wind-pollinated gymnosperm Ephedra nevadensis , and the short-lived, insect-pollinated angiosperm Sphaeralcea ambigua . Mean annual temperature was identified as an important driver of adaptive genetic divergence for both species. Ephedra showed stronger adaptive divergence with respect to precipitation variability, while temperature variability and precipitation averages explained a larger fraction of adaptive divergence in Sphaeralcea . We describe multivariate statistical approaches for interpolating spatial patterns of adaptive divergence while accounting for potential bias due to neutral genetic structure. Through a spatial bootstrapping procedure, we also visualize patterns in the magnitude of model uncertainty. Finally, we introduce an interactive, distance-based mapping approach that explicitly links marker-based models of adaptive divergence with local or admixture seed sourcing strategies, promoting effective native plant restoration.

Mojave Desert

Protocol for Landsat-Based Monitoring of Landscape Dynamics at North Coast and Cascades Network Parks

Background and Objectives As part of the National Park Service's larger goal of developing long-term monitoring programs in response to the Natural Resource Challenge of 2000, the parks of the North Coast and Cascades Network (NCCN) have determined that monitoring of landscape dynamics is necessary to track ecosystem health (Weber and others, 2005). Landscape dynamics refer to a broad suite of ecological, geomorphological, and anthropogenic processes occurring across broad spatial scales. The NCCN has sought protocols that would leverage remote-sensing technologies to aid in monitoring landscape dynamics.

Techniques and Methods

Modeling apple snail population dynamics on the Everglades landscape

Context The Florida Everglades has diminished in size and its existing wetland hydrology has been altered. The endangered snail kite ( Rostrhamus sociabilis ) has nearly abandoned the Everglades, and its prey, the apple snail ( Pomacea paludosa ), has declined. Objective We developed a population model (EverSnail) to understand apple snail response to inter- and intra-annual fluctuations in water depths over the Everglades landscape. EverSnail was developed as a tool to understand how apple snails respond to different hydrologic scenarios. Methods EverSnail is an age- and size-structured, spatially-explicit landscape model of P. paludosa in the Everglades. Landscape-level inputs are water depth and air temperature. We conducted sensitivity analyses by running EverSnail with &plusmn; 20 % the baseline value of eight parameters. Results EverSnail was sensitive to changes in survival and water depth associated with reproduction. The EverSnail population varied with changes and/or differences in depth generally consistent with empirical data; site-specific comparisons to field data proved less reliable. A simulated 3-year wet period resulted in a shift in apple snail distribution, but little change in total abundance over the landscape. In contrast, a simulated 3-year succession of relatively dry years resulted in overall lower snail abundances. Conclusions Comparisons of model output to empirical data indicate the need for more data to better understand, and eventually parameterize, several aspects of snail ecology in support of EverSnail. A primary value of EverSnail is its capacity to describe the relative response of snail abundance to alternative hydrologic scenarios considered for Everglades water management and restoration.

Florida

The ecological uncertainty of wildfire fuel breaks: Examples from the sagebrush steppe

Fuel breaks are increasingly being implemented at broad scales (100s to 10,000s of square kilometers) in fire‐prone landscapes globally, yet there is little scientific information available regarding their ecological effects (eg habitat fragmentation). Fuel breaks are designed to reduce flammable vegetation (ie fuels), increase the safety and effectiveness of fire‐suppression operations, and ultimately decrease the extent of wildfire spread. In sagebrush ( Artemisia spp) ecosystems of the western US, installation of extensive linear fuel breaks is also intended to protect habitat, especially for the greater sage‐grouse ( Centrocercus urophasianus ), a species that is sensitive to habitat fragmentation. We examine this apparent contradiction in the Great Basin region, where invasive annual grasses have increased wildfire activity and threaten sagebrush ecosystems. Given uncertain outcomes, we examine how implementation of fuel breaks might (1) directly alter ecosystems, (2) create edges and edge effects, (3) serve as vectors for wildlife movement and plant invasions, (4) fragment otherwise contiguous sagebrush landscapes, and (5) benefit from scientific investigation intended to disentangle their ecological costs and benefits.

California, Idaho, Nevada, Oregon, Utah

Landsat classification of surface-water presence during multiple years to assess response of playa wetlands to climatic variability across the Great Plains Landscape Conservation Cooperative region

To improve understanding of the distribution of ecologically important, ephemeral wetland habitats across the Great Plains, the occurrence and distribution of surface water in playa wetland complexes were documented for four different years across the Great Plains Landscape Conservation Cooperative (GPLCC) region. This information is important because it informs land and wildlife managers about the timing and location of habitat availability. Data with an accurate timestamp that indicate the presence of water, the percent of the area inundated with water, and the spatial distribution of playa wetlands with water are needed for a host of resource inventory, monitoring, and research applications. For example, the distribution of inundated wetlands forms the spatial pattern of available habitat for resident shorebirds and water birds, stop-over habitats for migratory birds, connectivity and clustering of wetland habitats, and surface waters that recharge the Ogallala aquifer; there is considerable variability in the distribution of playa wetlands holding water through time. Documentation of these spatially and temporally intricate processes, here, provides data required to assess connections between inundation and multiple environmental drivers, such as climate, land use, soil, and topography. Climate drivers are understood to interact with land cover, land use and soil attributes in determining the amount of water that flows overland into playa wetlands. Results indicated significant spatial variability represented by differences in the percent of playas inundated among States within the GPLCC. Further, analysis-of-variance comparison of differences in inundation between years showed significant differences in all cases. Although some connections with seasonal moisture patterns may be observed, the complex spatial-temporal gradients of precipitation, temperature, soils, and land use need to be combined as covariates in multivariate models to effectively account for these patterns. We demonstrate the feasibility of using classification of Landsat satellite imagery to describe playa-wetland inundation across years and seasons. Evaluating classifications representing only 4 years of imagery, we found significant year-to-year and state-to-state differences in inundation rates.

Great Plains Landscape Conservation Cooperative