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Seasonal and elevational differences by sex in capture rate of ʻōpeʻapeʻa (Lasiurus semotus) on Hawai‘i Island

The study of nocturnally active bats is difficult even for those species that seasonally congregate. This challenge is particularly acute for ‘ōpe‘ape‘a (Hawaiian hoary bat; Lasiurus semotus ) because of its solitary foliage-roosting behavior. Yet surveys are essential for conservation and management of this endangered species and only land mammal endemic to the Hawaiian Islands. We surveyed for ‘ōpe‘ape‘a at 23 sites and a range of elevations (33–2,341 m) on Hawai‘i Island from May 2018 to August 2021. We captured 138 unique bats (37 female, 101 male) over 224 mist-netting events. We averaged 16 net-hours per bat capture, with peak captures 30–90 min after sunset. We marked all captured individuals in this study with identifying forearm bands and recaptures represented 7% of total captures (10 of 148). We developed generalized linear mixed models to examine the relationship of nightly bat captures by sex to elevation and time-of-year while accounting for variable sampling effort and repeated sampling in this study. Both males and females were captured at low and high elevations with peak capture rates occurring at approximately 930 m. The capture rate for females was highest during the reproductive season (May to September), whereas it was highest for males during the non-reproductive season (October to April). This study informs future fieldwork with a description of ‘ōpe‘ape‘a capture on Hawai‘i Island by sex, elevation, time-of-year and time-of-night, radio transmitter retention, and recapture frequency.

Hawai‘i

Archive of bathymetry and backscatter data collected in 2014 nearshore Breton and Gosier Islands, Breton National Wildlife Refuge, Louisiana

As part of the Barrier Island Monitoring Project, scientists from the U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center conducted nearshore geophysical surveys off Breton and Gosier Islands, Louisiana, in July and August of 2014. To assist the United States Fish and Wildlife Service (USFWS) with restoration planning efforts, the USGS was tasked with answering fundamental questions about the physical environment of the southern Chandeleur Islands, including the geology, morphology, and oceanography. Baseline data needed to answer these questions were either insufficient or missing. The USGS conducted a comprehensive geologic investigation in the summer of 2014, collecting geophysical and sedimentological data. Breton Island, located at the southern end of the Chandeleur Island chain in southeastern Louisiana, was recognized as a natural, globally significant nesting sanctuary for several bird species and was established as the Breton National Wildlife Refuge (NWR) in 1904. The areal extent of Breton Island has diminished 90 percent since 1920. Land loss is attributed to ongoing relative sea-level rise, diminished sediment supply, and storm impacts. The bird population on Breton Island has also declined over the years, most notably after Hurricane George in 1998 and after Hurricane Katrina in 2015; the latter completely submerged the island. Despite decreasing habitable acreage, migratory seabirds continue to return and nest on Breton Island. To prevent the island from being submerged in the future, and to protect, stabilize, and provide more nesting and foraging areas for the bird population, the USFWS proposed a restoration effort to rebuild Breton Island to its pre-Katrina footprint. This data series serves as an archive of processed interferometric swath and single-beam bathymetry data, and side-scan sonar data, collected in the nearshore of Breton and Gosier Islands, NWR, Louisiana. The data were collected during two USGS cruises (USGS Field Activity Numbers 2014-314-FA and 2014-317-FA) in July and August 2014. Geographic information system data products include a 100-meter-cell-size interpolated bathymetry grid, trackline maps, and point data files. Additional files include error analysis maps, Field Activity Collection System logs, and formal Federal Geographic Data Committee metadata. NOTE: These data are scientific in nature and are not to be used for navigation. Any use of trade names is for descriptive purposes only and does not imply endorsement by the U.S. Government.

Louisiana

Recent, widespread nitrate decreases may be linked to persistent dissolved organic carbon increases in headwater streams recovering from past acidic deposition

Long-term monitoring of water quality responses to natural and anthropogenic perturbation of watersheds informs policies for managing natural resources. Dissolved organic carbon (DOC) and nitrate (NO 3 − ) in streams draining forested landscapes provide valuable information on ecosystem function due to their biogeochemical reactivity and solubility in water. Here we evaluate a 20-year record (2001−2021) of biweekly stream-water samples ( n > 3000) and continuous discharge in three forested catchments in the Adirondack region of New York to investigate and interpret long-term trends in DOC and NO 3 − concentrations. Results from the intensively monitored catchments were compared with data from synoptic surveys of streams throughout the Adirondack region. A weighted regressions on time, discharge, and season (WRTDS) model, used to estimate daily flow-normalized concentrations, determined that DOC increased by ~30 to 50 % while NO 3 − decreased by ~50 to 70 % over the study period. The large amount of data from catchments with different soil properties permitted us to assess the relative effects of hydrology, season, and land cover factors on temporal trends in DOC and NO 3 − concentrations. We found weak evidence of climatic forcing of long-term increases in DOC, and instead contend that declining ionic strength in precipitation linked to declining anthropogenic acid deposition is driving DOC trends in stream waters. Nitrate concentrations were more variable but clearly decreased in recent years possibly related to declining N deposition. The recent increase in DOC:NO 3 − in all catchments indicates a major shift in stream stoichiometry that reflects changes in ecosystem functioning that may have important biogeochemical implications for terrestrial as well as aquatic ecosystems.

Science of the Total Environment

System characterization report on Resourcesat-2A Advanced Wide Field Sensor

Executive Summary This report documents the system characterization of the Indian Space Research Organisation Resourcesat-2A Advanced Wide Field Sensor (AWiFS) and is part of a series of system characterization reports produced by the U.S. Geological Survey Earth Resources Observation and Science Cal/Val Center of Excellence. These reports describe the methodology and procedures used for characterization, present technical and operational information about the specific sensing system being evaluated, and provide a summary of test measurements, data retention practices, data analysis results, and conclusions. Resourcesat-2A was launched in 2016 on the Polar Satellite Launch Vehicle-C36; it is identical to Resourcesat-2, and together, they decrease imaging revisit time from 5 days to 2–3 days, providing data continuity and improved temporal resolution. Resourcesat-2 and -2A carry the AWiFS, Linear Imaging Self Scanning-3, and Linear Imaging Self Scanning-4 medium-resolution imaging sensors, continuing the legacy of the Indian Space Research Organisation’s Indian Remote Sensing-1C/1D/P3 satellite programs. More information about Indian Space Research Organisation satellites and sensors is available through the Joint Agency Commercial Imagery Evaluation Earth Observing Satellites Online Compendium and from the Indian Space Research Organisation at https://www.isro.gov.in/ . The Earth Resources Observation and Science Cal/Val Center of Excellence system characterization team assessed the geometric, radiometric, and spatial performance of the Resourcesat-2A AWiFS sensor. Geometric performance is divided into the interior geometric performance of band-to-band registration and the exterior geometric performance of geolocation accuracy. The interior geometric performance had offsets in the range of −1.10 meters (m; −0.020 pixel) to 3.67 m (0.066 pixel) in easting and −5.68 m (−0.101 pixel) to 10.38 m (0.185 pixel) in northing with root mean square error values from 5.60 m (0.100 pixel) to 11.31 m (0.202 pixel) in easting and from 3.00 m (0.054 pixel) to 13.52 m (0.241 pixel) in northing. The exterior geometric performance had mean offsets of −25.29 m in easting and 16.22 m northing with root mean square error values of 26.07 m in easting and 17.60 m in northing compared to the Landsat 8 Operational Land Imager sensor. The radiometric performance had offsets from −0.002 to 0.029 and slopes from 0.733 to 1.012. Spatial performance was in the range of 1.354 to 1.639 pixels for full width at half maximum with a modulation transfer function at a Nyquist frequency in the range of 0.108 to 0.174.

Open-File Report

Land-margin ecosystem hydrologic data for the coastal Everglades, Florida, water years 1996-2012

Mangrove forests and salt marshes dominate the landscape of the coastal Everglades (Odum and McIvor, 1990). However, the ecological effects from potential sea-level rise and increased water flows from planned freshwater Everglades restoration on these coastal systems are poorly understood. The National Park Service (NPS) proposed the South Florida Global Climate Change Project (SOFL-GCC) in 1990 to evaluate climate change and the effect from rising sea levels on the coastal Everglades, particularly at the marsh/mangrove interface or ecotone (Soukup and others, 1990). A primary objective of SOFL-GCC project was to monitor and synthesize the hydrodynamics of the coastal Everglades from the upstream freshwater marsh to the downstream estuary mangrove. Two related hypotheses were set forward (Nuttle and Cosby, 1993): 1. There exists hydrologic conditions (tide, local rainfall, and upstream water deliveries), which characterize the location of the marsh/mangrove ecotone along the marine and terrestrial hydrologic gradient; and 2. The marsh/mangrove ecotone is sensitive to fluctuations in sea level and freshwater inflow from inland areas. Hydrologic monitoring of the SOFL-GCC network began in 1995 after startup delays from Hurricane Andrew (August 1992) and organizational transfers from the NPS to the National Biological Survey (October 1993) and the merger with the U.S. Geological Survey (USGS) Biological Research Division in 1996 (Smith, 2004). As the SOFL-GCC project progressed, concern by environmental scientists and land managers over how the diversion of water from Everglades National Park would affect the restoration of the greater Everglades ecosystem. Everglades restoration scenarios were based on hydrodynamic models, none of which included the coastal zone (Fennema and others, 1994). Modeling efforts were expanded to include the Everglades coastal zone (Schaffranek and others, 2001) with SOFL-GCC hydrologic data assisting the ecological modeling needs. In 2002, as a response for a more interdisciplinary science approach to understanding the coastal Everglades ecological system, the SOFL-GCC hydrology project was integrated into the “Dynamics of Land-Margin Ecosystems: Historical Change, Hydrology, Vegetation, Sediment, and Climate” study (Smith and others, 2002). Data from the ongoing study has been useful in providing an empirical hydrologic baseline for the greater Everglades ecosystem restoration science and management needs. The hydrology network consisted of 13 hydrologic gaging stations installed in the southwestern coastal region of Everglades National Park along three transects: Shark River (Shark or SH) transect, Lostmans River (Lostmans or LO) transect, and Chatham River (Chatham or CH) transect (fig. 1). There were five paired surface-water/groundwater gaging stations on the Shark transect (SH1, SH2, SH3, SH4, and SH5) and one stage gaging station (BSC) in the Big Sable Creek; four paired surface-water/groundwater gaging stations on the Lostmans transect (LO1, LO2, LO3, and LO4); and three paired surface-water/groundwater gaging stations on the Chatham transect (CH1, CH2, and CH3). Both surface-water and groundwater levels, salinities, and temperatures were monitored at the paired gaging stations. Rainfall was recorded at marsh and open canopy gaging stations. This report details the study introduction, method, and description of data collected, which are accessible through the final instantaneous hydrologic dataset stored in the USGS South Florida Information Access (SOFIA) South Florida Hydrology Database website, http://sofia.usgs.gov/exchange/sfl_hydro_data/location.html#brdlandmargin .

Florida

Surrounding land cover types as predictors of palustrine wetland vegetation quality in conterminous USA

The loss of wetland habitats and their often-unique biological communities is a major environmental concern. We examined vegetation data obtained from 380 wetlands sampled in a statistical survey of wetlands in the USA. Our goal was to identify which surrounding land cover types best predict two indices of vegetation quality in wetlands at the regional scale. We considered palustrine wetlands in four regions (Coastal Plains, North Central East, Interior Plains, and West) in which the dominant vegetation was emergent, forested, or scrub-shrub. For each wetland, we calculated weighted proportions of eight land cover types surrounding the area in which vegetation was assessed, in four zones radiating from the edge of the assessment area to 2 km. Using Akaike's Information Criterion, we determined the best 1-, 2- and 3-predictor models of the two indices, using the weighted proportions of the land cover types as potential predictors. Mean values of the two indices were generally higher in the North Central East and Coastal Plains than the other regions for forested and emergent wetlands. In nearly all cases, the best predictors of the indices were not the dominant surrounding land cover types. Overall, proportions of forest (positive effect) and agriculture (negative effect) surrounding the assessment area were the best predictors of the two indices. One or both of these variables were included as predictors in 65 of the 72 models supported by the data. Wetlands surrounding the assessment area had a positive effect on the indices, and ranked third (33%) among the predictors included in supported models. Development had a negative effect on the indices and was included in only 28% of supported models. These results can be used to develop regional management plans for wetlands, such as creating forest buffers around wetlands, or to conserve zones between wetlands to increase habitat connectivity.

Science of the Total Environment

System characterization report on Resourcesat-2A Linear Imaging Self Scanning-3 sensor

Executive Summary This report addresses system characterization of the Indian Space Research Organisation Resourcesat-2A Linear Imaging Self Scanning-3 sensor and is part of a series of system characterization reports produced and delivered by the U.S. Geological Survey Earth Resources Observation and Science Cal/Val Center of Excellence since 2021. These reports present and detail the methodology and procedures for characterization, present technical and operational information about the specific sensing system being evaluated, and provide a summary of test measurements, data retention practices, data analysis results, and conclusions. Resourcesat-2A is identical to Resourcesat-2 and was launched in 2016 on the Polar Satellite Launch Vehicle-C36 for continuity of data and improved temporal resolution. The Resourcesat-2 platform (which includes Resourcesat-2A) is of Indian Remote Sensing Satellites-1C/1D–P3 heritage and was built by the Indian Space Research Organisation. Resourcesat-2 and Resourcesat-2A carry the Linear Imaging Self Scanning-3 and Linear Imaging Self Scanning-4 sensors for medium-resolution imaging. More information on Indian Space Research Organisation satellites and sensors is available in the “2022 Joint Agency Commercial Imagery Evaluation—Remote Sensing Satellite Compendium” and from the manufacturer at https://www.isro.gov.in/ . The Earth Resources Observation and Science Cal/Val Center of Excellence system characterization team completed data analyses to characterize the geometric (interior and exterior), radiometric, and spatial performances. To summarize the results, we have determined that this sensor provides an interior geometric performance with mean offsets in the range of 1.75 meters (m; 0.06 pixel) to 6.83 m (0.23 pixel) in easting and −1.83 m (−0.06 pixel) to 1.81 m (0.06 pixel) in northing in band-to-band registration and a root mean square error in the range of 3.81 m (0.13 pixel) to 8.19 m (0.27 pixel) in easting and 2.21 m (0.09 pixel) to 4.72 m (0.16 pixel) in northing. We have measured an exterior geometric error offset in the range of −21.29 to 6.88 m in easting and −7.35 to −2.63 m in northing, and the root mean square error is in the range of 7.19 to 21.43 m in easting and 3.64 to 8.19 m in northing in comparison to the Landsat 8 Operational Land Imager. The measured radiometric performance was in the range of −0.002 to 0.031 in offset and 0.701 to 0.940 in slope, and the spatial performance was in the range of 1.204 to 1.265 pixels for full width at half maximum with a modulation transfer function at a Nyquist frequency in the range of 0.251 to 0.277.

Open-File Report

Validation of the ASTER Global Digital Elevation Model version 3 over the conterminous United States

The ASTER Global Digital Elevation Model Version 3 (GDEM v3) was evaluated over the conterminous United States in a manner similar to the validation conducted for the original GDEM Version 1 (v1) in 2009 and GDEM Version 2 (v2) in 2011. The absolute vertical accuracy of GDEM v3 was calculated by comparison with more than 23,000 independent reference geodetic ground control points from the U.S. National Geodetic Survey. The root mean square error (RMSE) measured for GDEM v3 is 8.52 meters. This compares with the RMSE of 8.68 meters for GDEM v2. Another important descriptor of vertical accuracy is the mean error, or bias, which indicates if a DEM has an overall vertical offset from true ground level. The GDEM v3 mean error of −1.20 meters reflects an overall negative bias in GDEM v3. The absolute vertical accuracy assessment results, both mean error and RMSE, were segmented by land cover type to provide insight into how GDEM v3 performs in various land surface conditions. While the RMSE varies little across cover types (6.92 to 9.25 meters), the mean error (bias) does appear to be affected by land cover type, ranging from −2.99 to +4.16 meters across 14 land cover classes. These results indicate that in areas where built or natural aboveground features are present, GDEM v3 is measuring elevations above the ground level, a condition noted in assessments of previous GDEM versions (v1 and v2) and an expected condition given the type of stereo-optical image data collected by ASTER. GDEM v3 was also evaluated by differencing with the Shuttle Radar Topography Mission (SRTM) dataset. In many forested areas, GDEM v3 has elevations that are higher in the canopy than SRTM. The overall validation effort also included an evaluation of the GDEM v3 water mask. In general, the number of distinct water polygons in GDEM v3 is much lower than the number in a reference land cover dataset, but the total areas compare much more closely.

The International Archives of the Photogrammetry,

A Central Asia hydrologic monitoring dataset for food and water security applications in Afghanistan

From the Hindu Kush mountains to the Registan Desert, Afghanistan is a diverse landscape where droughts, floods, conflict, and economic market accessibility pose challenges for agricultural livelihoods and food security. The ability to remotely monitor environmental conditions is critical to support decision making for humanitarian assistance. The Famine Early Warning Systems Network (FEWS NET) Land Data Assimilation System (FLDAS) global and Central Asia data streams provide information on hydrologic states for routine integrated food security analysis. While developed for a specific project, these data are publicly available and useful for other applications that require hydrologic estimates of the water and energy balance. These two data streams are unique because of their suitability for routine monitoring, as well as for being a historical record for computing relative indicators of water availability. The global stream is available at ∼ 1-month latency, and monthly average outputs are on a 10 km grid from 1982–present. The second data stream, Central Asia (21–56 ∘ N, 30–100 ∘ E), at ∼ 1 d latency, provides daily average outputs on a 1 km grid from 2000–present. This paper describes the configuration of the two FLDAS data streams, background on the software modeling framework, selected meteorological inputs and parameters, and results from previous evaluation studies. We also provide additional analysis of precipitation and snow cover over Afghanistan. We conclude with an example of how these data are used in integrated food security analysis. For use in new and innovative studies that will improve understanding of this region, these data are hosted by U.S. Geological Survey data portals and the National Aeronautics and Space Administration (NASA). The Central Asia data described in this paper can be accessed via the NASA repository at https://doi.org/10.5067/VQ4CD3Y9YC0R (Jacob and Slinski, 2021), and the global data described in this paper can be accessed via the NASA repository at https://doi.org/10.5067/5NHC22T9375G (McNally, 2018).

Earth System Science Data

Flood-inundation maps and wetland restoration suitability index for the Blue River and selected tributaries, Kansas City, Missouri, and vicinity, 2012

Digital flood-inundation maps for a 39.7-mile reach of the Blue River and selected tributaries (Brush Creek, Indian Creek, and Dyke Branch) at Kansas City, Missouri, and vicinity, were created by the U.S. Geological Survey (USGS) in cooperation with the City of Kansas City, Missouri. The flood-inundation maps, accessed through the USGS Flood-Inundation Mapping Science Web site at http://water.usgs.gov/osw/flood_inundation/, depict estimates of the spatial extent and depth of flooding corresponding to selected water levels (stages) at 15 reference streamgages and associated stream reaches in the Blue River Basin. Near-real-time stage data from the streamgages may be obtained from the USGS National Water Information System at http://waterdata.usgs.gov/ or the National Weather Service (NWS) Advanced Hydrologic Prediction Service (AHPS) at http://water.weather.gov/ahps/, which also forecasts flood hydrographs at selected sites. Flood profiles were computed for each of 15 reaches by means of one-dimensional or two-dimensional hydraulic models. The models were calibrated by using the current stage-streamflow relations at 10 USGS streamgages and documented high-water marks from the flood of June 14, 2010. Hydraulic models were then used to compute water-surface profiles for flood stages at 1-foot intervals referenced to the streamgage datum and ranging from the National Weather Service Action stage, or near bankfull streamflow, through the stage corresponding to, or exceeding, the estimated 0.2-percent annual exceedance probability flood (500-year recurrence interval flood). The simulated water-surface profiles were then combined with a geographic information system (GIS) terrain model derived from light detection and ranging (lidar) data having a vertical accuracy of less than 0.6 foot and maximum nominal horizontal post spacing of 2.46–3.28 feet to delineate the area flooded at each 1-foot increment of stage. The availability of these flood-inundation maps, along with Internet information regarding current stage from the USGS streamgages and forecasted high-flow stages from the NWS, will provide emergency management personnel and residents with information that is critical for flood response activities such as evacuations and road closures, as well as for postflood recovery efforts. Additional information in this report includes maps of simulated stream velocity for an 8.2-mile, two-dimensional modeled reach of the Blue River and a Wetland Restoration Suitability Index (WRSI) generated for the study area that was based on hydrologic, topographic, and land-use digital feature layers. The calculated WRSI for the selected flood-plain area ranged from 1 (least suitable for possible wetland mitigation efforts) to 10 (most suitable for possible wetland mitigation efforts). A WRSI of 5 to 10 is most closely associated with existing riparian wetlands in the study area. The WRSI allows for the identification of lands along the Blue River and selected tributaries that are most suitable for restoration or creation of wetlands. Alternatively, the index can be used to identify and avoid disturbances to areas with the highest potential to support healthy sustainable riparian wetlands.

Missouri

Surficial geology of the lower Comb Wash, San Juan County, Utah

The surficial geologic map of lower Comb Wash was produced as part of a master’s thesis for Northern Arizona University Quaternary Sciences program. The map area includes the portion of the Comb Wash alluvial valley between Highway 163 and Highway 95 on the Colorado Plateau in southeastern Utah. The late Quaternary geology of this part of the Colorado Plateau had not previously been mapped in adequate detail. The geologic information in this report will be useful for biological studies, land management and range management for federal, state and private industries. Comb Wash is a south flowing ephemeral tributary of the San Juan River, flanked to the east by Comb Ridge and to the west by Cedar Mesa (Figure 1). The nearest settlement is Bluff, about 7 km to the east of the area. Elevations range from 1951 m where Highway 95 crosses Comb Wash to 1291 m at the confluence with the San Juan River. Primary vehicle access to lower Comb Wash is provided by a well-maintained dirt road that parallels the active channel of Comb Wash between Highway 163 and Highway 95. For much of the year this road can be traversed without the aid of four-wheel drive. However, during inclement weather such as rain or snow the road becomes treacherous even with four-wheel drive. The Comb Wash watershed is public land managed by the Bureau of Land management (BLM) office in Monticello, Utah. The semi-arid climate of Comb Wash and the surrounding area is typical of the Great Basin Desert. Temperature in Bluff, Utah ranges from a minimum of –8° C in January to a maximum of 35° C in July with a mean annual temperature of 9.8° C (U.S. Department of Commerce, 1999). The difference between day and nighttime temperatures is as great as 20° C. Between 1928 and 1998, annual rainfall in Bluff averaged 178 mm per year (U.S. Department of Commerce, 1999). Annual rainfall in Comb Wash averaged 240 mm per year from 1991 to 1999 while Bluff received an average of 193 mm for the same 8 year period. Most precipitation is monsoonal, convective storms that bring moisture from the Gulf of Mexico beginning in early July and ending by October. Large frontal storms during December and January are responsible for most winter precipitation (Figure 2). The record from U.S. Geological Survey gauging station number 09379000 operated by the BLM from 1959 through 1968 indicates that Comb Wash flows in direct response to precipitation events. Most daily discharge and peak events occur in late July through September, coinciding with high intensity monsoon thunderstorms. Comb Wash supports a variety of vegetation typical of the Great Basin Desert and the northern desert shrub zone as described by Fowler and Koch (1982). On the lower alluvial terraces, bushes and shrubs dominate the vegetation, including: sagebrush (Artemesia tridentata), rabbitbrush (Chrysothamnus nauseosus), fourwing saltbush (Atriplex canescens), winterfat (Eurotia lanata), greasewood (Sarcobatus vermiculatus), and shadscale (Atriplex concertifolia). Juniper trees (Juniperus osteosperma) can be found on the rocky colluvial slopes near Comb Ridge and on the higher terrace near Cedar Mesa. The floodplain contains an abundance of riparian vegetation including cottonwood (Populus fremontii), willow (Salix exigua), and tamarisk (Tamarix ramosissima). Tamarisk is one of 7 non-native species present in the lower Comb Wash watershed. At least seven known species of noxious weeds have invaded the watershed, including Bermuda grass (Cynodon dactylon), field bindweed (Convolvulus avensis), Canada thistle (Cirsium arvense), Russian knapweed (Centaurea repens), tamarisk and camel thorn (Alhagi pseudalhagi). Of these, tamarisk or salt-cedar has most aggressively colonized the southwestern United States, including the San Juan watershed. Graf (1978) estimates that since the late 19th century, tamarisk has spread at a rate of 20 km per year. Tamarisk first appeared in Comb Wash during the mid to early 20th century based on photographs taken by Gregory in the early 1900’s (Gregory, 1938).

Utah

Stakeholder Evaluation for Canaan Valley National Wildlife Refuge: Completion Report

The National Wildlife Refuge System, managed by the U.S. Fish and Wildlife Service (FWS), is the largest system of public lands in the world dedicated to wildlife conservation. There are over 545 national wildlife refuges nationwide, encompassing 95 million acres. As part of the National Wildlife Refuge System Improvement Act of 1997, each refuge is developing 15-year comprehensive conservation plans (CCPs). Each CCP describes a vision and desired future condition for the refuge and outlines goals, objectives, and management strategies for each refuge's habitat and visitor service programs. The CCP process for Canaan Valley National Wildlife Refuge (Refuge) in Davis, West Virginia was initiated in 2006. This planning process provides a unique opportunity for public input and involvement. Public involvement is an important part of the CCP process. Participation by parties with a stake in the resource (stakeholders) has the potential to increase understanding and support and reduce conflicts. Additionally, meaningful public participation in a decision process may increase trust and provide satisfaction in terms of both process and outcome for management and the public. Public meetings are a common way to obtain input from community members, visitors, and potential visitors. An 'Issues Workbook' is another tool the FWS uses to obtain public input and participation early in the planning process. Sometimes, however, these traditional methods do not capture the full range of perspectives that exist. A stakeholder evaluation is a way to more fully understand community preferences and opinions related to key topics in refuge planning. It can also help refuge staff understand how changes in management affect individuals in terms of their preference for services and experiences. Secondarily, a process such as this can address 'social goals' such as fostering trust in regulating agencies and reducing conflict among stakeholders. As part of the CCP planning effort at Canaan Valley National Wildlife Refuge, the FWS sponsored a stakeholder evaluation conducted by the Policy Analysis and Science Assistance Branch of U.S. Geological Survey, Fort Collins Science Center the winter of 2006-2007. The stakeholder evaluation was intended to answer the following questions: 1)Which Refuge management issues are most important, and to whom?, 2)How do opinions about what is most important to stakeholders overlap or conflict?, 3)Why do stakeholders emphasize specific issues, and what values are driving this?, and 4)What potential solutions do stakeholders have for addressing important issues? This information will be used by the Refuge to help guide development of their CCP as they strive to balance stakeholder desires with their charge to manage the unique wetlands and uplands of the Canaan Valley for wildlife conservation.

Open-File Report

Annotated bibliography of scientific research on Gunnison sage-grouse published from January 2005 to September 2022

Integrating recent scientific knowledge into management decisions supports effective natural resource management and can lead to better resource outcomes. However, finding and accessing scientific knowledge can be time consuming and costly. To assist in this process, the U.S. Geological Survey is creating a series of annotated bibliographies on topics of management concern for western lands. Previously published reports introduced a methodology for preparing annotated bibliographies to facilitate the integration of recent, peer-reviewed science into resource management decisions. Therefore, relevant text from those efforts is reproduced here to frame the presentation. Centrocercus minimus (Gunnison sage-grouse; hereafter GUSG) has been a focus of scientific investigation since the early 2000s. The U.S. Fish and Wildlife Service listed GUSG as threatened under the Endangered Species Act in 2014 because of declining populations and increasing habitat loss. The U.S. Fish and Wildlife Service, Bureau of Land Management, and Colorado Parks and Wildlife have sought to increase the conservation of this species by adapting management and recovery plans to reduce threats and increase population resiliency. GUSG are studied less than the closely related Centrocercus urophasianus (greater sage-grouse); however, research efforts have recently increased to understand the life history, genetics, and habitat suitability of this sagebrush-obligate species. We compiled and summarized peer-reviewed journal articles, data products, and formal technical reports (such as U.S. Department of Agriculture Forest Service General Technical Reports and U.S. Geological Survey Open-File Reports) on GUSG, published between January 2005 and September 2022. We first systematically searched three reference databases and three government databases using the following search phrases: “Gunnison sage-grouse” or “lesser sage-grouse” or “Gunnison grouse” or “Gunnison sage grouse” or “lesser sage grouse” or “ Centrocercus minimus .” We refined the initial list of products by removing (1) duplicates, (2) publications that were not published as research, data products, or scientific review articles in peer-reviewed journals or as formal technical reports, and (3) products that did not have GUSG as a research focus or products that did not present new data or findings about GUSG. We summarized each product using a consistent structure (background, objectives, methods, location, findings, and implications) and identified the management topics (for example, population estimates or targets, habitat, and management efforts) addressed by each product. We also noted which publications included new geospatial data. The review process for this annotated bibliography included two initial internal colleague reviews of each summary, requesting input on each summary from an author of the original publication, and a formal peer review. Our initial searches resulted in 80 total products, of which 63 met our criteria for inclusion of which 53 were products that had not been summarized before. Across products summarized in the annotated bibliography, broad-scale habitat characteristics; population estimates or targets; behavior or demographics; and genetics were the most commonly addressed management topics. The bibliographies are available on the Science for Resource Managers tool ( https://apps.usgs.gov/science-for-resource-managers ) and are searchable by topic, location, and year, and the search tool includes links to each original publication. The studies compiled and summarized in this annotated bibliography may inform planning and management actions that seek to maintain and restore sagebrush landscapes and GUSG populations across the GUSG range.

Colorado

Strategic directions for U.S. Geological Survey water science, 2012-2022 - Observing, understanding, predicting, and delivering water science to the Nation

Executive Summary This report expands the Water Science Strategy that was begun in the USGS Science Strategy, “Facing Tomorrow’s Challenges—U.S. Geological Survey Science in the Decade 2007–2017” (U.S. Geological Survey, 2007). The report looks at the relevant issues facing society and develops a strategy built around observing, understanding, predicting, and delivering water science for the next 5 to 10 years by building new capabilities, tools, and delivery systems to meet the Nation’s water-resource needs. This report begins by presenting the vision of water science for the USGS and the societal issues that are influenced by, and in turn influence, the water resources of our Nation. The essence of the Water Strategic Science Plan is built on the concept of “water availability,” defined as spatial and temporal distribution of water quantity and quality, as related to human and ecosystem needs, as affected by human and natural influences . The report also describes the core capabilities of the USGS in water science—the strengths, partnerships, and science integrity that the USGS has built over its 130-year history. Nine priority actions are presented in the report, which combine and elevate the numerous specific strategic actions listed throughout the report. Priority actions were developed as a means of providing the audience of this report with a list for focused attention, even if resources and time limit the ability of managers to address all of the strategic actions in the report. Priority actions focus on the following: Improve integrated science planning for water. Expand and enhance water-resource monitoring networks. Characterize the water cycle through development of state-of-the-art 3-D/4-D hydrogeologic framework models at multiple scales. Clarify the linkage between human water use (engineered hydrology) and the water cycle (natural hydrology). Advance ecological flow science. Provide flood-inundation science and information. Develop rapid deployment teams for water-related emergencies. Conduct integrated watershed assessment, research, and modeling. Deliver water data and analyses to the Nation. The body of the report is presented as a hierarchal set of 5 goals, 14 objectives, and 27 strategic actions that the USGS should undertake to advance water science through year 2022. The goals deal with: Providing society the information it needs regarding the amount and quality of water in all components of the water cycle at high temporal and spatial resolution, nationwide; Advancing our understanding of processes that determine water availability; Predicting changes in the quantity and quality of water resources in response to changing climate, population, land use, and management scenarios; Anticipating and responding to water-related emergencies and conflicts; and Delivering timely hydrologic data, analyses, and decision-support tools seamlessly across the Nation to support water-resource decisions. Scientific information produced on water resources would be without value if it were not communicated to society in a fashion that can inform decisions and actions. Therefore, the chapter following the goals describes how the USGS should inform, involve, and educate society about the science it produces. This includes discussions on local outreach and the use of social media for effective communication. This report concludes with a chapter devoted to the crosscutting science issues of the Water Mission Area with the other USGS Mission Areas: Climate and Land Use Change, Core Science Systems, Ecosystems, Energy and Minerals, Environmental Health Science, and Natural Hazards. Not one of these Mission Areas stands alone—all must work together and integrate their actions to fulfill the USGS science mission for the future. This final chapter identifies the important linkages that must be realized and maintained for this integration to occur.

Open-File Report

Combining ecological and genomic diversity surveys to inform conservation and restoration of an endangered wetland plant, soft salty bird’s-beak (Chloropyron molle ssp. molle)

Emergent tidal wetlands are declining globally as a result of sea level rise and land use change. This habitat loss can keenly affect rare plant species within wetlands, and may require restoration to meet species recovery goals related to retaining populations throughout species' ranges. Soft salty bird’s-beak ( Chloropyron molle ssp. molle ) is a federally- and state-endangered hemi-parasitic plant that occurs at the upper marsh transition zone in the San Francisco Bay–Delta, California, USA. We combined field surveys to document habitat associations and trends in abundance with genomic surveys to understand patterns of genetic structure in this rare endemic. We found that C . molle ssp. molle persisted at nine previously occupied marsh sites, although four sites (Hill Slough, MOTCO East, Fagan Marsh, and Joice Island) were smaller in population size than when surveyed in the 1990s. Additionally, twelve sites contained plots with suitable but unoccupied habitat that could be further assessed for restoration. Genomic analysis of over 40,000 single-nucleotide polymorphisms (SNPs) and 253 individuals grouped C . molle ssp. molle into six to seven regional genetic clusters with isolation by distance, and confirmed that C . molle ssp. molle is genetically distinct from adjacent populations of its closest relative ( C . molle ssp. hispidum ). The western-most C . molle ssp. molle sites of Point Pinole and Fagan Marsh were the most genetically and geographically isolated and had the lowest genome-wide diversity. Heterozygosity in sets of genes associated with tidal elevation, salinity, and annual and summer precipitation varied independently across populations. Overall, these genomic patterns indicate that selecting donor sites with similar environmental conditions and utilizing composite seeding approaches from multiple sites could allow for local adaptation to a range of possible environmental conditions. This comprehensive survey of habitat and genomic patterns can allow for the development of restoration actions and build climate-adaptation planning to help prevent the loss of a rare plant.

California

Field surveys of Midwestern and Northeastern Fish and Wildlife Service lands for the presence of abnormal frogs and toads

The national distribution of information on the discovery of malformations in Minnesota frogs in 1995 stimulated collection and examination of newly metamorphosed frogs during 1996. By late summer and early fall of 1996, malformed frogs and toads were reported on U.S. Fish and Wildlife Service (USFWS) lands in Vermont (Northeast, Region 5) and Minnesota (Midwest, Region 3). In response to these reports, biologists in USFWS Regions 3 and 5 conducted a survey, during the summer of 1997 to determine the distribution and type of malformations in frogs and toads on selected federal lands. Region 3 personnel surveyed 38 field stations at National Wildlife Refuges (NWR's) and Wetland Management Districts. Malformed frogs and toads were collected at 23 (61%) of the Region 3 sites. External malformations were detected in 110 of 6632 individuals representing seven of 13 frog species and one of three toad species examined for an overall of 1.7% affected (percentages for affected species ranged from 0.4-5.2%). In Region 5, 17 NWR's and one National Park were surveyed. Malformed frogs were collected at 10 (56%) of the Region 5 sites. External malformations were detected in 58 of 2267 individuals representing six of 11 frog species and one of two toad species examined for an overall total of 2.6% affected (percentages for affected species ranged from 1.8-15.6%). The majority of malformations observed in frogs and toads collected in Regions 3 and 5 were partially or completely missing hind limbs and digits (50%)or malformed hind limbs and digits (14%). A few individuals had an extra limb or toe, missing or malformed front limb, missing eye, or malformation of the mandible. Despite small sample sizes at some sites, malformations were confirmed to be present in eight species of frogs and two species of toads on Federal lands in USFWS Regions 3 and 5. Further study is needed to determine the extent and distribution of amphibian malformations in these Regions. Data from this study were provided to the national database on distribution of malformed amphibians.

Iowa, Illinois, Michigan, Minnesnowta, Missouri, O

Application of the Precipitation-Runoff Modeling System (PRMS) in the Apalachicola-Chattahoochee-Flint River Basin in the southeastern United States

A hydrologic model of the Apalachicola–Chattahoochee–Flint River Basin (ACFB) has been developed as part of a U.S. Geological Survey (USGS) National Climate Change and Wildlife Science Center effort to provide integrated science that helps resource managers understand the effect of climate change on a range of ecosystem responses. The hydrologic model was developed as part of the Southeast Regional Assessment Project using the Precipitation Runoff Modeling System (PRMS), a deterministic, distributed-parameter, process-based system that simulates the effects of precipitation, temperature, and land use on basin hydrology. The ACFB PRMS model simulates streamflow throughout the approximately 50,700 square-kilometer basin on a daily time step for the period 1950–99 using gridded climate forcings of air temperature and precipitation, and parameters derived from spatial data layers of altitude, land cover, soils, surficial geology, depression storage (small water bodies), and data from 56 USGS streamgages. Measured streamflow data from 35 of the 56 USGS streamgages were used to calibrate and evaluate simulated basin streamflow; the remaining gage locations were used for model delineation only. The model matched measured daily streamflow at 31 of the 35 calibration gages with Nash-Sutcliffe Model Efficiency Index (NS) greater than 0.6. Streamflow data for some calibration gages were augmented for regulation and water use effects to represent more natural flow volumes. Time-static parameters describing land cover limited the ability of the simulation to match historical runoff in the more developed subbasins. Overall, the PRMS simulation of the ACFB provides a good representation of basin hydrology on annual and monthly time steps. Calibration subbasins were analyzed by separating the 35 subbasins into five classes based on physiography, land use, and stream type (tributary or mainstem). The lowest NS values were rarely below 0.6, whereas the median NS for all five classes was within 0.74 to 0.96 for annual mean streamflow, 0.89 to 0.98 for mean monthly streamflow, and 0.82 to 0.98 for monthly mean streamflow. The median bias for all five classes was within –4.3 to 0.8 percent for annual mean streamflow, –6.3 to 0.5 percent for mean monthly streamflow, and –9.3 to 1.3 percent for monthly mean streamflow. The NS results combined with the percent bias results indicated a good to very good streamflow volume simulation for all subbasins. This simulation of the ACFB provides a foundation for future modeling and interpretive studies. Streamflow and other components of the hydrologic cycle simulated by PRMS can be used to inform other types of simulations; water-temperature, hydrodynamic, and ecosystem-dynamics simulations are three examples. In addition, possible future hydrologic conditions could be studied using this model in combination with land cover projections and downscaled general circulation model results.

Alabama, Florida, Georgia

LiDAR-Derived Flood-Inundation Maps for Real-Time Flood-Mapping Applications, Tar River Basin, North Carolina

Flood-inundation maps were created for selected streamgage sites in the North Carolina Tar River basin. Light detection and ranging (LiDAR) data with a vertical accuracy of about 20 centimeters, provided by the Floodplain Mapping Information System of the North Carolina Floodplain Mapping Program, were processed to produce topographic data for the inundation maps. Bare-earth mass point LiDAR data were reprocessed into a digital elevation model with regularly spaced 1.5-meter by 1.5-meter cells. A tool was developed as part of this project to connect flow paths, or streams, that were inappropriately disconnected in the digital elevation model by such features as a bridge or road crossing. The Hydraulic Engineering Center-River Analysis System (HEC-RAS) model, developed by the U.S. Army Corps of Engineers, was used for hydraulic modeling at each of the study sites. Eleven individual hydraulic models were developed for the Tar River basin sites. Seven models were developed for reaches with a single gage, and four models were developed for reaches of the Tar River main stem that receive flow from major gaged tributaries, or reaches in which multiple gages were near one another. Combined, the Tar River hydraulic models included 272 kilometers of streams in the basin, including about 162 kilometers on the Tar River main stem. The hydraulic models were calibrated to the most current stage-discharge relations at 11 long-term streamgages where rating curves were available. Medium- to high-flow discharge measurements were made at some of the sites without rating curves, and high-water marks from Hurricanes Fran and Floyd were available for high-stage calibration. Simulated rating curves matched measured curves over the full range of flows. Differences between measured and simulated water levels for a specified flow were no more than 0.44 meter and typically were less. The calibrated models were used to generate a set of water-surface profiles for each of the 11 modeled reaches at 0.305-meter increments for water levels ranging from bankfull to approximately the highest recorded water level at the downstream-most gage in each modeled reach. Inundated areas were identified by subtracting the water-surface elevation in each 1.5-meter by 1.5-meter grid cell from the land-surface elevation in the cell through an automated routine that was developed to identify all inundated cells hydraulically connected to the cell at the downstream-most gage in the model domain. Inundation maps showing transportation networks and orthoimagery were prepared for display on the Internet. These maps also are linked to the U.S. Geological Survey North Carolina Water Science Center real-time streamflow website. Hence, a user can determine the near real-time stage and water-surface elevation at a U.S. Geological Survey streamgage site in the Tar River basin and link directly to the flood-inundation maps for a depiction of the estimated inundated area at the current water level. Although the flood-inundation maps represent distinct boundaries of inundated areas, some uncertainties are associated with these maps. These are uncertainties in the topographic data for the hydraulic model computational grid and inundation maps, effective friction values (Manning's n), model-validation data, and forecast hydrographs, if used. The Tar River flood-inundation maps were developed by using a steady-flow hydraulic model. This assumption clearly has less of an effect on inundation maps produced for low flows than for high flows when it typically takes more time to inundate areas. A flood in which water levels peak and fall slowly most likely will result in more inundation than a similar flood in which water levels peak and fall quickly. Limitations associated with the steady-flow assumption for hydraulic modeling vary from site to site. The one-dimensional modeling approach used in this study resulted in good agreement between measurements and simulations. T

North Carolina