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Assessing biological effects from highway-runoff constituents

Increased emphasis on evaluation of nonpoint-source pollution has intensified the need for techniques that can be used to discern the toxicological effects of complex chemical mixtures. In response, the use of biological assessment techniques is receiving increased regulatory emphasis. When applied with documented habitat assessment and chemical analysis, these techniques can increase our understanding of the influence of environmental contaminants on the biological integrity and ecological function of aquatic communities. The contaminants of greatest potential concern in highway runoff are those that arise from highway construction, maintenance, and use. The major contaminants of interest are deicers; nutrients; metals; petroleum-related organic compounds, such as polycyclic aromatic hydrocarbons (PAHs), benzene, toluene, ethylbenzene, and xylene (BTEX), and methyl tert -butyl ether (MTBE); sediment washed off the road surface; and agricultural chemicals used in highway maintenance. Hundreds, if not thousands, of biological endpoints (measurable responses of living organisms) may be either directly or associatively affected by contaminant exposure. Measurable effects can occur throughout ecosystem processes across the wide range of biological complexity, ranging from responses at the biochemical level to the community level. The challenge to the environmental scientist is to develop an understanding of the relationship of effects at various levels of biological organization in order to determine whether a causal relationship exists between chemical exposure and substantial ecological impairment. This report provides a brief history of the evolution of biological assessment techniques, a description of the major classes of contaminants that are of particular interest in highway runoff, an overview of representative biological assessment techniques, and a discussion of data-quality considerations. Published reports with a focus on the effects of highway runoff on the local ecosystem were reviewed to provide information on (1) the suitability of the existing data for a quantitative national synthesis, (2) the methods available to study the effects of highway runoff on local ecosystems, and (3) the potential for adverse effects on the roadside environment and receiving waters. Although many biological studies have been done, the use of different methods and a general lack of sufficient documentation precludes a quantitative national synthesis on the basis of the existing data. The Federal Highway Administration, the U.S. Environmental Protection Agency, the U.S. Geological Survey, the Intergovernmental Task Force on Monitoring Water Quality, and the National Resources Conservation Service all have developed and documented methods for assessing the effects of contaminants on ecosystems in receiving waters. These published methods can be used to formulate a set of protocols to provide consistent information from highway-runoff studies. Review of the literature indicates (qualitatively) that highway runoff (even from highways with high traffic volume) may not usually be acutely toxic. Tissue analysis and community assessments, however, indicate effects from highway- runoff sediments near discharge points (even from sites near highways with relatively low traffic volumes). At many sites, elevated concentrations of highway-runoff constituents were measured in tissues of species associated with aquatic sediments. Community assessments also indicate decreases in the diversity and productivity of aquatic ecosystems at some sites receiving highway runoff. These results are not definitive, however, and depend on many site-specific criteria that were not sufficiently documented in most of the studies reviewed.

Open-File Report↗

A meta-analysis highlights the idiosyncratic nature of tradeoffs in laboratory models of virus evolution

Different theoretical frameworks have been invoked to guide the study of virus evolution. Three of the more prominent ones are (i) the evolution of virulence, (ii) life history theory, and (iii) the generalism–specialism dichotomy. All involve purported tradeoffs between traits that define the evolvability and constraint of virus-associated phenotypes. However, as popular as these frameworks are, there is a surprising paucity of direct laboratory tests of the frameworks that support their utility as broadly applicable theoretical pillars that can guide our understanding of disease evolution. In this study, we conduct a meta-analysis of direct experimental evidence for these three frameworks across several widely studied virus–host systems: plant viruses, fungal viruses, animal viruses, and bacteriophages. We extracted 60 datasets from 28 studies and found a range of relationships between traits in different analysis categories (e.g., frameworks, virus–host systems). Our work demonstrates that direct evidence for relationships between traits is highly idiosyncratic and specific to the host–virus system and theoretical framework. Consequently, scientists researching viral pathogens from different taxonomic groups might reconsider their allegiance to these canons as the basis for expectation, explanation, or prediction. Future efforts could benefit from consistent definitions, and from developing frameworks that are compatible with the evidence and apply to particular biological and ecological contexts.

Virus Evolution↗

Geohistory and thermal maturation in the Cherokee Basin (Mid-Continent, U.S.A.): results from modeling

The Cherokee basin in southeastern Kansas contains a stratigraphic section consisting mostly of Permian-Pennsylvanian alternating clastics and thin carbonates overlying carbonates of Mississippian and Cambrian-Ordovician age on a Precambrian crytalline basement. Based on a conceptual model of events of deposition, nondeposition, and erosion, a burial history model for (1) noncompaction, and a series of models for (2) compaction are computed for a borehole location in the south-central part of the basin. The models are copled with the calculation of nonsteady-state geothermal conditions. Maximum temperatures during basin evolution of about 70??C at the base of the organic-rich Pennsylvanian are predicted by our models, assuming pure heat conduction and a heat flow from the basement of 60 m W/m2. The maturation of organic matter as indicated by three different vitrinite reflectance (Ro) models is on the order og 0.3-0.5% Ro for Pennsylvanian rocks and 0.6% Ro for the Devonian-Mississippian Cattanooga Shale. Vitrinite reflectance was measured on subsurface smaples from three wells. The measured values correlate in the upper part of the sequence with modeled data, but diverge slightly in the Lower Pennsylvanian and Cattanooga Shale. The differences in maturation may be a result of differing local geological conditions within the basin. The relatively high Ro-depth gradients observed in one borehole may be explained by conditions in the Teeter oil field, which is a typical plains-type anticline that has been affected by fluid flow through vertical faults. Higher Ro values correlate positively with the grade of sulfidfe mineralization in the sediment, which may be a hint of fluid impact. The high Ro values relative to the shallow depth of the Mississippian and the Chattanooga Shale in the Brown well are on the order of Ro values modeled for the same stratigraphic units at present-day greater depths and may reflect uplift of the Ozark dome, located further east, affecting the eastern side of the Cherokee Basin.Based on a concept model of deposition, nondeposition and erosion, a burial history model for noncompaction, and a series of models for compaction are developed for a borehole location in a south-central part of the Cherokee basin in southeastern Kansas. Coupled with the calculation of nonsteady state-state geothermal conditions, the models predict maximum temperatures during evolution of about 70 ??C at the base of the organic-rich Pennsylvanian. A difference in organic matter maturation in the Pennsylvanian and the Chattanooga shale exhibited by vitrinite reflectance models indicate probably differing local geological conditions within the basin.

American Association of Petroleum Geologists Bulle↗

Fracture Development within the Karaha-Telaga Bodas Geothermal Field, Indonesia

Karaha-Telaga Bodas is a partially vapor-dominated geothermal system located in an active volcano in western Java. More than 2 dozen geothermal wells have been drilled to depths of 3 km. Detailed paragenetic and fluid-inclusion studies have defined liquid-dominated, transitional and vapor-dominated stages in the evolution of this system. The liquid-dominated stage was initiated by shallow magma intrusion into the base of the volcanic cone. Lava and pyroclastic flows capped a geothermal system. The uppermost andesite flows were only weakly fractured due to the insulating effect of the intervening altered pyroclastics, which absorbed the deformation. Shear and tensile fractures were filled with carbonates at shallow depths and by quartz, epidote and actinolite at depths and temperatures over 1km and 300??C. The system underwent numerous local cycles of overpressuring, which are marked by subhorizontal tensile fractures, anastomosing tensile fractures and implosion breccias. The development of the liquid system was interrupted by a catastrophic drop in fluid pressures. As the fluids boiled in response to this pressure drop, chalcedony and quartz were deposited in fractures having the largest apertures and steep dips. The orientations of these fractures indicate that the escaping overpressured fluids used the shortest possible paths to the surface. Vapor-dominated conditions were initiated within a vertical chimney over the still hot intrusion. As pressures declined these conditions spread outward. Downward migration of the chimney occurred as the intrusion cooled and the brittle-ductile transition migrated to greater depths. Condensate that formed at the top of the vapor-dominated zone percolated downward and lowsalinity meteoric water entered the marginal parts of the system. Calcite, anhydrite, and fluorite precipitated in fractures upon heating. A progressive sealing of the fractures occurred, resulting in the downward migration of the cap rock. In response to decreasing pore pressures in the expanding vapor zone, the fracture system within the vapor-dominated reservoir progressively collapsed, leaving only residual permeability, with apertures supported by asperities or propping breccia. In places, the fractures have completely collapsed where normal stresses acting on the fracture walls exceeded the compressive strength of the wall rock.

Conference Paper↗

Predictive techniques for river channel evolution and maintenance

Predicting changes in alluvial channel morphology associated with anthropogenic and natural changes in flow and/or sediment supply is a critical part of the management of riverine systems. Over the past few years, advances in the understanding of the physics of sediment transport in conjunction with rapidly increasing capabilities in computational fluid dynamics have yielded now approaches to problems in river mechanics. Techniques appropriate for length scales ranging from reaches to bars and bedforms are described here. Examples of the use of these computational approaches are discussed for three cases: (1) the design of diversion scenarios that maintain channel morphology in steep cobble-bedded channels in Colorado, (2) determination of channel maintenance flows for the preservation of channel islands in the Snake River in Idaho, and (3) prediction of the temporal evolution of deposits in lateral separation zones for future assessment of the impacts of various dam release scenarios on lateral separation deposits in the Colorado River in Grand Canyon. With continued development of their scientific and technical components, the methodologies described here can provide powerful tools for the management of river environments in the future.

Water, Air, & Soil Pollution↗

Geologic map and digital database of the Yucaipa 7.5’ quadrangle, San Bernardino and Riverside Counties, California

Introduction This geologic database of the Yucaipa 7.5' quadrangle was prepared by the Southern California Areal Mapping Project (SCAMP), a regional geologic-mapping project sponsored jointly by the U.S. Geological Survey and the California Geological Survey. The database was developed as a contribution to the National Cooperative Geologic Mapping Program's National Geologic Map Database, and is intended to provide a general geologic setting of the Yucaipa quadrangle. The database and map provide information about earth materials and geologic structures, including faults and folds that have developed in the quadrangle due to complexities in the San Andreas Fault system. The Yucaipa 7.5' quadrangle contains materials and structures that provide unique insight into the Mesozoic and Cenozoic geologic evolution of southern California. Stratigraphic and structural elements include: (1) strands of the San Andreas Fault that bound far-traveled terranes of crystalline and sedimentary rock; (2) Mesozoic crystalline rocks that form lower and upper plates of the regionwide Vincent-Orocopia Thrust system; and (3) late Tertiary and Quaternary sedimentary materials and geologic structures that formed during the last million years or so and that record complex geologic interactions within the San Andreas Fault system. These materials and the structures that deform them provide the geologic framework for investigations of geologic hazards and ground-water recharge and subsurface flow. Geologic information contained in the Yucaipa database is general-purpose data that is applicable to land-related investigations in the earth and biological sciences. The term "generalpurpose" means that all geologic-feature classes have minimal information content adequate to characterize their general geologic characteristics and to interpret their general geologic history. However, no single feature class has enough information to definitively characterize its properties and origin. For this reason the database cannot be used for site-specific geologic evaluations, although it can be used to plan and guide investigations at the site-specific level.

California↗

Porphyry copper assessment of Europe, exclusive of the Fennoscandian Shield: Chapter K in Global mineral resource assessment

The U.S. Geological Survey (USGS) collaborated with European geologists to assess resources in porphyry copper deposits in Europe, exclusive of Scandinavia (Sweden, Denmark, Norway, and Finland) and Russia. Porphyry copper deposits in Europe are Paleozoic and Late Cretaceous to Miocene in age. A number of the 31 known Phanerozoic deposits contain more than 1 million metric tons of contained copper, including the Majdanpek deposit, Serbia; Assarel, Bulgaria; Skouries, Greece; and Rosia Poeni, Romania. Five geographic areas were delineated as permissive tracts for post-Paleozoic porphyry copper deposits. Two additional tracts were delineated to show the extent of permissive igneous rocks associated with porphyry copper mineralization related to the Paleozoic Caledonian and Variscan orogenies. The tracts are based on mapped and inferred subsurface distributions of igneous rocks of specific age ranges that define areas where the occurrence of porphyry copper deposits within 1 kilometer of the Earth’s surface is possible. These tracts range in area from about 4,000 to 93,000 square kilometers. Although maps at a variety of different scales were used in the assessment, the final tract boundaries are intended for use at a scale of 1:1,000,000. The post-Paleozoic deposits in Europe all formed in conjunction with the tectonic evolution of southern Europe as the former Tethyan Ocean closed by convergence of the African and Arabian Plates with Europe, accompanied by accretion of microcontinents to the southern Eurasian Plate and development and demise of magmatic arcs and ocean basins. Many of the deposits formed in extensional or post-collisional settings; these tectonic environments are increasingly being recognized as environments where porphyry copper deposits occur. Probabilistic estimates of undiscovered porphyry copper deposits were made for four Phanerozoic permissive tracts; the other tracts are discussed qualitatively. Assessment participants estimated numbers of undiscovered deposits at different levels of confidence for the four tracts. These estimates were then combined with grade and tonnage models using Monte Carlo simulation to generate probabilistic estimates of amounts of in-place undiscovered resources. Additional resources that may be present in extensions of known deposits were not evaluated. Assessment results are reported in tables and graphs as expected amounts of metal and rock in undiscovered deposits at different quantile levels, as well as the arithmetic mean for each commodity for each tract. This assessment estimated a mean of 14 undiscovered porphyry copper deposits within the four permissive tracts for which estimates were made. On the basis of global grade and tonnage models, mean (arithmetic) estimated resources that could be associated with undiscovered deposits are about 46 million metric tons of copper and about 2,600 metric tons of gold, as well as byproduct molybdenum and silver. Reliable reported identified resources for the 27 deposits in the assessed areas total about 44 million metric tons of copper and about 2,300 metric tons of gold. Exploration for gold-rich porphyry systems is ongoing in some parts of historical copper mining districts in central Europe and in northwesternmost (European) Turkey. Political and social conflicts, environmental concerns associated with historical mining, and the global economic situation have had negative effects on exploration, development, and mining in Europe for many years. The assessment includes an overview with summary tables. Detailed descriptions of each tract, including the rationales for delineation and assessment, are given in appendixes A–G. Appendix H describes a geographic information system (GIS) that includes tract boundaries and point locations of known porphyry copper deposits and significant prospects.

Scientific Investigations Report↗

Response of Late Cretaceous migrating deltaic facies systems to sea level, tectonics, and sediment supply changes, New Jersey Coastal Plain, U.S.A.

Paleogeographic, isopach, and deltaic lithofacies mapping of thirteen depositional sequences establish a 35 myr high resolution (> 1 Myr) record of Late Cretaceous wave- and tide-influenced deltaic sedimentation. We integrate sequences defined on the basis of lithologic, biostratigraphic, and Sr-isotope stratigraphy from cores with geophysical log data from 28 wells to further develop and extend methods and calibrations of well-log recognition of sequences and facies variations. This study reveals the northeastward migration of depocenters from the Cenomanian (ca. 98 Ma) through the earliest Danian (ca. 64 Ma) and documents five primary phases of paleodeltaic evolution in response to long-term eustatic changes, variations in sediment supply, the location of two long-lived fluvial axes, and thermoflexural basement subsidence: (1) Cenomanian-early Turonian deltaic facies exhibit marine and nonmarine facies and are concentrated in the central coastal plain; (2) high sediment rates, low sea level, and high accommodation rates in the northern coastal plain resulted in thick, marginal to nonmarine mixed-influenced deltaic facies during the Turonign-Coniacian; (3) comparatively low sediment rates and high long-term sea level in the Santonian resulted in a sediment-starved margin with low deltaic influence; (4) well-developed Campanian deltaic sequences expand to the north and exhibit wave reworking and longshore transport of sands, and (5) low sedimentation rates and high long-term sea level during the Maastrichtian resulted in the deposition of a sediment-starved glauconitic shelf. Our study illustrates the widely known variability of mixed-influence deltaic systems, but also documents the relative stability of deltaic facies systems on the 106-107 yr scale, with long periods of cyclically repeating systems tracts controlled by eustasy. Results from the Late Cretaceous further show that although eustasy provides the template for sequences globally, regional tectonics (rates of subsidence and accommodation), changes in sediment supply, proximity to sediment input, and flexural subsidence from depocenter loading determines the regional to local preservation and facies expression of sequences. Copyright ?? 2008, SEPM (Society for Sedimentary Geology).

Journal of Sedimentary Research↗

Late Cretaceous inoceramid bivalves of the Kuskokwim Basin, southwestern Alaska, and their implications for basin evolution

Upper Cretaceous rocks of the Kuskokwim Group are exposed in a large region of southwestern Alaska and are mainly composed of deformed turbidite deposits that contain few fossils other than inoceramid bivalves. This paper documents the taxonomy of the inoceramids in the Kuskokwim Group, develops an inoceramid biostratigraphy based on known ranges in other regions, and analyzes biogeographic patterns, paleoecology, and depositional history of the Kuskokwim Group. Most of the inoceramid bivalves present in the Kuskokwim Group are of Cenomanian and Turonian age, and an assemblage of species typical of late Turonian age rocks is particularly well developed. Only two localities appear to be as young as Santonian age. The following 16 species or subspecies are discussed and illustrated in detail: Birostrina tamurai Matsumoto and Noda, Inoceramus virgatus Schlüter, I. pennatulus Pergament, I. pictus minus Matsumoto, I. cf. I. yabei Nagao and Matsumoto, I. ? sp. aff. I. costatus Nagao and Matsumoto, I. hobetsensis Nagao and Matsumoto, I. longealatus Tröger, I. frechi Flegel, I. waltersdorfensis waltersdorfensis Andert, I. cf. I. waltersdorfensis hannovrensis Heinz, I. kuskokwimensis n. sp., Mytiloides cf. M. opalensis (Böse), M. teraokai (Matsumoto and Noda), M. cf. M. incertus (Jimbo), and Sphenoceramus naumanni (Yokoyama). In addition, a specimen with affinities to Mytiloides striatoconcentricus carpathicus (Simionescu) and a specimen that may belong to the I. (Cremnoceramus?) rotundatus–I. ( C .) erectus lineage are illustrated. Most of the taxa present in the Kuskokwim region are found in other regions of the North Pacific, particularly Japan and eastern Siberia, or are found throughout the Northern Hemisphere. Only one species, I. kuskokwimensis n. sp., is new and may be endemic. North Pacific taxa are predominant in the Kuskokwim region, but intervals near the Cenomanian–Turonian Stage boundary and in the upper Turonian contain taxa characteristic of Europe and the Western Interior basin of North America; some of these taxa have not been recorded previously in the North Pacific region. Turonian heteromorph ammonite assemblages associated with inoceramids in the finer grained facies of the Kuskokwim region are similar to those found in coeval rocks of Japan and Germany. The depositional area of the Kuskokwim Group can be broken into two northeast-trending subbasins, the Kuskokwim River subbasin to the northwest and the Mulchatna River subbasin to the southeast, connected by the Nushagak Hills corridor. Within the Kuskokwim River subbasin, deposition apparently started earlier in the north (middle Cenomanian) than in the south (late Cenomanian to early Turonian), and prograding deltaic sedimentation along the western margin also appears to have started earlier in the north. No marine fossils younger than latest Turonian to earliest Coniacian are known from the Kuskokwim River subbasin. The youngest fossils identified are Santonian in age and are from deep-water deposits in the Nushagak Hills corridor. Few fossils are known from the Mulchatna River subbasin and age control is limited.

Journal of Paleontology↗

Rare milkvetch (Astragalus) persistence at a utility-scale solar energy facility in the Mojave Desert

Utility-scale solar energy (USSE) development is driving the projected growth in global renewable energy capacity but comes with environmental tradeoffs. New, alternative construction methods are promoted to minimize impacts to soils, vegetation, and hydrology; however, the disturbance created by these methods requires further investigation. We evaluated the population of a rare annual species, threecorner milkvetch ( Astragalus geyeri var. triquetrus ), at the Gemini Solar Project in the Mojave Desert, USA, two years after construction. Gemini was required to minimize disturbance in the threecorner milkvetch habitat, providing a unique opportunity to study the plant population and life history characteristics of a rare plant species under novel construction methods. Our objectives were to compare plant population characteristics of threecorner milkvetch inside and outside the Gemini footprint and in different photovoltaic (PV) panel microsites (interspace, panel dripline, under panel). We hypothesized that 1) threecorner milkvetch would have lower survival, reproduction, and growth, and a later phenology, inside compared to outside the facility, and 2) that these negative effects on plant demography and phenology would intensify with increasing proximity to photovoltaic panels in the solar array due to an increasing effect of disturbance and reduction of light and water availability. The results of this 1-year study during a favorable year of rainfall demonstrate the persistence of a rare Mojave annual plant species within an altered environment at a USSE facility. We found that threecorner milkvetch had an earlier phenology, grew larger, and had a higher fecundity at Gemini compared to plants off-site. Survivorship between the two populations, however, was not significantly different. Although growth and reproductive metrics were not correlated with distance to panel, minimal threecorner milkvetch emergence occurred directly under the PV panels and along their driplines, indicating a potential loss of suitable habitat if this pattern becomes more widespread in space or through time. Novel construction techniques for USSE could be considered moving forward to minimize impact on aboveground vegetation and maintain viable seed banks. The results of this study can assist land managers in making decisions about USSE development as the demand grows.

Nevada↗

Historical evolution of the Columbia River littoral cell

This paper details the historical coastal evolution of the Columbia River littoral cell in the Pacific Northwest of the United States. Geological data from A.D. 1700 and records leading up to the late 1800s provide insights to the natural system dynamics prior to significant human intervention, most notably jetty construction between 1885 and 1917. All reliable surveys, charts, and aerial photos are used to quantify decadal-scale changes at the three estuary entrances and four sub-cells of the littoral cell. Shoreline, bathymetric, and topographic change over three historical intervals—1870s–1920s, 1920s–1950s, and 1950s–1990s—are integrated to provide an understanding of sediment-sharing relationships among the littoral cell components. Regional morphological change data are developed for alongshore segments of approximately 5 km, enabling comparisons of shoreline change to upper-shoreface and barrier volume change within common compartments. The construction of entrance jetties at the Columbia River (1885–1917) and Grays Harbor (1898–1916) has profoundly affected the evolution of the littoral cell, and has accentuated the morphological coupling between the inlets, ebb-tidal deltas, shorefaces, and barriers. The jetties induced erosion of the inlets and offshore migration of ebb-tidal deltas. The change in boundary conditions at the entrances enabled waves to rework the flanks of ebb-tidal deltas and supply enormous quantities of sand to the adjacent coasts. Over several decades the initial sand pulses have been dispersed alongshore up to tens of kilometers from the estuary entrances. Winter waves and coastal currents produce net northward sediment transport across the shoreface while summer conditions tend to induce onshore sediment transport and accumulation of the upper shoreface and barriers at relatively high rates. Historical shoreline progradation rates since jetty construction are approximately double the late prehistoric rates between 1700 and the 1870s. Erosion rates of the mid- to lower shoreface to the south of the jettied estuary entrances have typically been greater than the accumulation rates of the upper shoreface and barrier, suggesting that the lower shoreface has been an important source of littoral sediments over decadal and longer time scales. Until recent decades, sediment supply from the ebb-tidal delta flanks and lower shoreface has largely masked the decline in Columbia River sediment supply resulting from flow regulation and dredging disposal practices. With the contemporary onset and expansion of coastal erosion adjacent to the jettied estuary entrances, proper management of dredged sediment is imperative to mitigate the effects of a declining sediment budget.

Oregon, Washington↗

Predicting the resilience and recovery of aquatic systems: a framework for model evolution within environmental observatories

Maintaining the health of aquatic systems is an essential component of sustainable catchmentmanagement, however, degradation of water quality and aquatic habitat continues to challenge scientistsand policy-makers. To support management and restoration efforts aquatic system models are requiredthat are able to capture the often complex trajectories that these systems display in response to multiplestressors. This paper explores the abilities and limitations of current model approaches in meeting this chal-lenge, and outlines a strategy based on integration of flexible model libraries and data from observationnetworks, within a learning framework, as a means to improve the accuracy and scope of model predictions.The framework is comprised of a data assimilation component that utilizes diverse data streams from sensornetworks, and a second component whereby model structural evolution can occur once the model isassessed against theoretically relevant metrics of system function. Given the scale and transdisciplinarynature of the prediction challenge, network science initiatives are identified as a means to develop and inte-grate diverse model libraries and workflows, and to obtain consensus on diagnostic approaches to modelassessment that can guide model adaptation. We outline how such a framework can help us explore thetheory of how aquatic systems respond to change by bridging bottom-up and top-down lines of enquiry,and, in doing so, also advance the role of prediction in aquatic ecosystem management.

Water Resources Research↗

Rapid evolution meets invasive species control: The potential for pesticide resistance in sea lamprey

Rapid evolution of pest, pathogen and wildlife populations can have undesirable effects; for example, when insects evolve resistance to pesticides or fishes evolve smaller body size in response to harvest. A destructive invasive species in the Laurentian Great Lakes, the sea lamprey (Petromyzon marinus) has been controlled with the pesticide 3-trifluoromethyl-4-nitrophenol (TFM) since the 1950s. We evaluated the likelihood of sea lamprey evolving resistance to TFM by (1) reviewing sea lamprey life history and control; (2) identifying physiological and behavioural resistance strategies; (3) estimating the strength of selection from TFM; (4) assessing the timeline for evolution; and (5) analyzing historical toxicity data for evidence of resistance. The number of sea lamprey generations exposed to TFM was within the range observed for fish populations where rapid evolution has occurred. Mortality from TFM was estimated as 82-90%, suggesting significant selective pressure. However, 57 years of toxicity data revealed no increase in lethal concentrations of TFM. Vigilance and the development of alternative controls are required to prevent this aquatic invasive species from evolving strategies to evade control.

Canadian Journal of Fisheries and Aquatic Sciences↗

Antarctic ice sheet; computer animations and paper model

This report illustrates, through computer animation and a paper model, why there are changes on the ice sheet that covers the Antarctica continent. By studying the animations and the paper model, students will better understand the evolution of the Antarctic ice sheet. Included in the paper and diskette versions of this report are templates for making a paper-model, instructions for its assembly, and a discussion of development of the Antarctic ice sheet. In addition, the diskette version includes a animation of how Antarctica and its ice cover changes through time. Many people provided help and encouragement in the development of this HyperCard stack, particularly Page Mosier, Sue Priest and Art Ford. This report was enhanced by reviews from Bonnie Murchey, Peter Stauffer and Stephen Eittreim.

Open-File Report↗

Geochemical evolution processes and water-quality observations based on results of the National Water-Quality Assessment Program in the San Antonio segment of the Edwards aquifer, Texas, 1996-2006

As part of the National Water-Quality Assessment Program, the U.S. Geological Survey collected and analyzed groundwater samples during 1996-2006 from the San Antonio segment of the Edwards aquifer of central Texas, a productive karst aquifer developed in Cretaceous-age carbonate rocks. These National Water-Quality Assessment Program studies provide an extensive dataset of groundwater geochemistry and water quality, consisting of 249 groundwater samples collected from 136 sites (wells and springs), including (1) wells completed in the shallow, unconfined, and urbanized part of the aquifer in the vicinity of San Antonio (shallow/urban unconfined category), (2) wells completed in the unconfined (outcrop area) part of the regional aquifer (unconfined category), and (3) wells completed in and springs discharging from the confined part of the regional aquifer (confined category). This report evaluates these data to assess geochemical evolution processes, including local- and regional-scale processes controlling groundwater geochemistry, and to make water-quality observations pertaining to sources and distribution of natural constituents and anthropogenic contaminants, the relation between geochemistry and hydrologic conditions, and groundwater age tracers and travel time. Implications for monitoring water-quality trends in karst are also discussed. Geochemical and isotopic data are useful tracers of recharge, groundwater flow, fluid mixing, and water-rock interaction processes that affect water quality. Sources of dissolved constituents to Edwards aquifer groundwater include dissolution of and geochemical interaction with overlying soils and calcite and dolomite minerals that compose the aquifer. Geochemical tracers such as magnesium to calcium and strontium to calcium ratios and strontium isotope compositions are used to evaluate and constrain progressive fluid-evolution processes. Molar ratios of magnesium to calcium and strontium to calcium in groundwater typically increase along flow paths; results for samples of Edwards aquifer groundwater show an increase from shallow/urban unconfined, to unconfined, to confined groundwater categories. These differences are consistent with longer residence times and greater extents of water-rock interaction controlling fluid compositions as groundwater evolves from shallow unconfined groundwater to deeper confined groundwater. Results for stable isotopes of hydrogen and oxygen indicate specific geochemical processes affect some groundwater samples, including mixing with downdip saline water, mixing with recent recharge associated with tropical cyclonic storms, or mixing with recharge water than has undergone evaporation. The composition of surface water recharging the aquifer, as well as mixing with downdip water from the Trinity aquifer or the saline zone, also might affect water quality. A time-series record (1938-2006) of discharge at Comal Springs, one of the major aquifer discharge points, indicates an upward trend for nitrate and chloride concentrations, which likely reflects anthropogenic activities. A small number of organic contaminants were routinely or frequently detected in Edwards aquifer groundwater samples. These were the pesticides atrazine, its degradate deethylatrazine, and simazine; the drinking-water disinfection byproduct chloroform; and the solvent tetrachloroethene. Detection of these contaminants was most frequent in samples of the shallow/urban unconfined groundwater category and least frequent in samples of the unconfined groundwater category. Results indicate that the shallow/urban unconfined part of the aquifer is most affected by anthropogenic contaminants and the unconfined part of the aquifer is the least affected. The high frequency of detection for these anthropogenic contaminants aquifer-wide and in samples of deep, confined groundwater indicates that the entire aquifer is susceptible to water-quality changes as a result of anthropogenic activities. L

Texas↗

Evolution of volcanic and tectonic features in caldera settings and their importance in the localization of ore deposits

Many calderas are located along regionally important fault zones that are intermittently active before and after the caldera cycle. In mineralized calderas, the ore deposits are controlled by structures developed during caldera formation and by regional faults which intersect and reactivate the caldera-related structures. In the earliest phase of the caldera cycle, tumescence occurs over the shallowly emplaced magma chamber and normal faults develop within the structural dome above the magma chamber. This early phase of faulting is disrupted by caldera formation but some of the faults are preserved outside the caldera margin and may become important ore-controlling structures such as the Ruja mercury deposit in the McDermitt caldera complex, Nevada, and the precious metal deposits in the Atlanta district, Nevada, outside the Indian Peak caldera. Caldera-related structures such as ring fracture faults are commonly the most important in controlling the emplacement of resurgent magma, as well as postcollapse intrusions and associated ore deposits. During the resurgence phase of the caldera, faults related to an apical graben, and radial and ring faults and fractures form and may extend outside the collapse structure. Radial and ring faults and fractures provided the structural control for gold alunite-type deposits in the Rodalquilar caldera complex, Spain.At the end of the caldera cycle, the area over the batholith related to the caldera-forming magma chambers is uplifted as isostatic compensation occurs, or subsides if the volcanic field is developed within a rapidly subsiding graben. Volume change resulting from crystallization will also contribute to subsidence. Regional subsidence of the Lake Owyhee volcanic field in southeastern Oregon at the end of the caldera cycle is reflected by arkosic sedimentation in the caldera basins and throughout the eastern part of the volcanic field. Crystallization of the underlying batholith permits the reestablishment of brittle deformation along the regional faults which initially may have controlled magma emplacement. This tectonic activity may reactivate caldera structures and these typically become important for localization of hydrothermal activity. Hot spring-type gold deposits in the Lake Owyhee volcanic field formed when a regional northwest-trending structure reactivated the caldera ring fracture fault zone of the Three Fingers caldera. The formation of hydrothermal ore deposits at the end of the caldera cycle is often related to tectonic reactivation of caldera structures by regional faults and emplacement of small volumes of magma as stocks and vent complexes along these structures.

Economic Geology↗

Structural evolution of the southeastern portion of the Anadarko Basin region

Field investigations in the Lake Classen-Turner Falls, Oklahoma, area of the northern Arbuckle anticline, on the southeastern margin of the Anadarko basin, indicate that transpressional (oblique compressional) deformation of Late Pennsylvanian age dominated the structural development of this area. The Arbuckle anticline is detached along the NW -trending, SW -dipping, left-reverse Arbuckle fault and is thrust obliquely onto the margin of the Tishomingo block to the east. Paleostress analysis of slip lines on mesoscopic faults along the northeastern limb of the Arbuckle anticline, associated in style and geometry with oblique Arbuckle thrusting, indicates compression directed N. 35-60° E.

Oklahoma↗

Hidden Markov movement models reveal diverse seasonal movement patterns in two North American ungulates

Animal movement is the mechanism connecting landscapes to fitness, and understanding variation in seasonal animal movements has benefited from the analysis and categorization of animal displacement. However, seasonal movement patterns can defy classification when movements are highly variable. Hidden Markov movement models (HMMs) are a class of latent-state models well-suited to modeling movement data. Here, we used HMMs to assess seasonal patterns of variation in the movement of pronghorn ( Antilocapra americana ), a species known for variable seasonal movements that challenge analytical approaches, while using a population of mule deer ( Odocoileus hemionus ), for whom seasonal movements are well-documented, as a comparison. We used population-level HMMs in a Bayesian framework to estimate a seasonal trend in the daily probability of transitioning between a short-distance local movement state and a long-distance movement state. The estimated seasonal patterns of movements in mule deer closely aligned with prior work based on indices of animal displacement: a short period of long-distance movements in the fall season and again in the spring, consistent with migrations to and from seasonal ranges. We found seasonal movement patterns for pronghorn were more variable, as a period of long-distance movements in the fall was followed by a winter period in which pronghorn were much more likely to further initiate and remain in a long-distance movement pattern compared with the movement patterns of mule deer. Overall, pronghorn were simply more likely to be in a long-distance movement pattern throughout the year. Hidden Markov movement models provide inference on seasonal movements similar to other methods, while providing a robust framework to understand movement patterns on shorter timescales and for more challenging movement patterns. Hidden Markov movement models can allow a rigorous assessment of the drivers of changes in movement patterns such as extreme weather events and land development, important for management and conservation.

Wyoming↗