Geology Reports⌕ Search

SEARCH · Geology Reports

Results for “Biology Direct”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 379 records · Page 21Linked to original sources
USGS2007

Biomechanical factors contributing to self-organization in seagrass landscapes

Field observations have revealed that when water flow is consistently from one direction, seagrass shoots align in rows perpendicular to the primary axis of flow direction. In this study, live Zostera marina shoots were arranged either randomly or in rows perpendicular to the flow direction and tested in a seawater flume under unidirectional flow and waves to determine if shoot arrangement: a) influenced flow-induced force on individual shoots, b) differentially altered water flow through the canopy, and c) influenced light interception by the canopy. In addition, blade breaking strength was compared with flow-induced force to determine if changes in shoot arrangement might reduce the potential for damage to shoots. Under unidirectional flow, both current velocity in the canopy and force on shoots were significantly decreased when shoots were arranged in rows as compared to randomly. However, force on shoots was nearly constant with downstream distance, arising from the trade-off of shoot bending and in-canopy flow reduction. The coefficient of drag was higher for randomly-arranged shoots at low velocities (< 30 cm s- 1) but converged rapidly among the two shoot arrangements at higher velocities. Shoots arranged in rows tended to intercept slightly more light than those arranged randomly. Effects of shoot arrangement under waves were less clear, potentially because we did not achieve the proper plant size?row spacing ratio. At this point, we may only suggest that water motion, as opposed to light capture, is the dominant physical mechanism responsible for these shoot arrangements. Following a computation of the Environmental Stress Factor, we concluded that even photosynthetically active blades may be damaged or broken under frequently encountered storm conditions, irrespective of shoot arrangement. We hypothesize that when flow is generally from one direction, seagrass bed patterns over multiple scales of consideration may arise as a cumulative effect of individual shoot self-organization driven by reduced force and drag on the shoots and somewhat improved light capture.

Journal of Experimental Marine Biology and Ecology↗
USGS2022

Mechanisms for retention of low molecular weight organic carbon varies with soil depth at a coastal prairie ecosystem

Though primary sources of carbon (C) to soil are plant inputs (e.g., rhizodeposits), the role of microorganisms as mediators of soil organic carbon (SOC) retention is increasingly recognized. Yet, insufficient knowledge of sub-soil processes complicates attempts to describe microbial-driven C cycling at depth as most studies of microbial-mineral-C interactions focus on surface horizons. We leveraged a well-studied paleo-marine terrace (90 ka) located near Santa Cruz, CA, to characterize the short-term (days to weeks) and intermediate-term (months to years) fate of two low molecular weight organic carbon. compounds at three depths in the soil profile (∼25 cm, A horizon; ∼75 cm A/B transition; and ∼125 cm, B horizon). We employed isotopically-labeled glucose (GLU) and oxalic acid (OXA) to represent two common classes of rhizodeposits: carbohydrates and organic acids. Using a combination of laboratory (9 d) and field (490 d) incubations, we traced the fate of GLU-C and OXA-C through dissolved-, metal-associated-, and microbially-respired CO2 and bulk SOC pools. Our results suggest new SOC retention (i.e., defined as 13C label identified in solid or aqueous fractions) over intermediate time frames (490 d) is correlated with patterns in short-term (9 d) cycling dynamics, which in turn is related to the theoretical efficiency by which microorganisms process each substrate. For all horizons (A, A/B, and B) GLU-C was converted to CO2 more quickly than OXA-C with modeled decomposition rates ∼2–4 times faster for GLU depending on microbial density (higher in A than B horizon). The faster decomposition rates of GLU-C increased fractional recovery (0.399 ± 0.026 to 0.504 ± 0.030 for GLU-C) compared to OXA-C (0.035 ± 0.003 to 0.127 ± 0.010) among all horizons in our field experiment (490 d). Though the overall proportion of GLU-C recovered in solid fractions did not vary significantly with horizon, based on 13C recovered in aqueous fractions the apparent mechanism for retention did. After the 9-d laboratory incubation, fractional recovery for GLU-C among C pools associated with microbial biomass was almost 20× higher than OXA-C (0.192 versus 0.010, respectively across all horizons). More than a year later, 43–46% of GLU-C retained in the field incubation was extractable with a neutral salt (representing a pool of soil C residing within or available to microbial biomass) among A and A/B horizons, while only 6% of retained GLU-C was similarly extractable in the B horizon. Thus, it appears among depths with higher microbial density (A, A/B horizons), anabolic recycling is the most likely process contributing to the persistence of glucose C, whereas abiotic sinks contributed more to intermediate-term stability for GLU-C in the B horizon. By contrast, most OXA-C was lost, presumably as CO2, over the short-term from the A and A/B horizons (fractional recovery: 0.136 ± 0.011 and 0.091 ± 0.002, respectively). However, though substantially lower than GLU-C recovered at the conclusion of our field experiment, the fraction of oxalic acid C retained in the B horizon over both short- (0.72 ± 0.037) and intermediate-time (0.127 ± 0.010) frames was several-fold higher than for overlying horizons. The specific process(es) (e.g., more efficient microbial utilization, metal-organic complexation, direct adsorption to the mineral matrix, etc.) contributing to higher retention for OXA-C at depth are discussed but remain unresolved.

Soil Biology and Biochemistry↗
USGS2017

Maximizing establishment and survivorship of field-collected and greenhouse-cultivated biocrusts in a semi-cold desert

Aims Biological soil crusts (biocrusts) are soil-surface communities in drylands, dominated by cyanobacteria, mosses, and lichens. They provide key ecosystem functions by increasing soil stability and influencing soil hydrologic, nutrient, and carbon cycles. Because of this, methods to reestablish biocrusts in damaged drylands are needed. Here we test the reintroduction of field-collected vs. greenhouse-cultured biocrusts for rehabilitation. Methods We collected biocrusts for 1) direct reapplication, and 2) artificial cultivation under varying hydration regimes. We added field-collected and cultivated biocrusts (with and without hardening treatments) to bare field plots and monitored establishment. Results Both field-collected and cultivated cyanobacteria increased cover dramatically during the experimental period. Cultivated biocrusts established more rapidly than field-collected biocrusts, attaining ~82% cover in only one year, but addition of field-collected biocrusts led to higher species richness, biomass (as assessed by chlorophyll a) and level of development. Mosses and lichens did not establish well in either case, but late successional cover was affected by hardening and culture conditions. Conclusions This study provides further evidence that it is possible to culture biocrust components from later successional materials and reestablish cultured organisms in the field. However, more research is needed into effective reclamation techniques.

Plant and Soil↗
USGS1992

Hydrogeology, ground-water quality, and potential for water-supply contamination near the Shelby County landfill in Memphis, Tennessee

An investigation was conducted from 1989 to 1991 to collect and interpret hydrogeologic and ground-water-quality data specific to the Shelby County landfill in east Memphis, Tennessee. Eighteen wells were installed in the alluvial and Memphis aquifers at the landfill. Hydrogeologic data collected showed that the confining unit separating the alluvial aquifer from the Memphis aquifer was thin or absent just north of the landfill and elsewhere consists predominantly of fine sand and silt with lenses of clay. A water-table map of the landfill vicinity confirms the existence of a depression in the water table north and northeast of the landfill and indicates that ground water flows northeast from the Wolf River passing beneath the landfill toward the depression in the water table. A map of the potentiometric surface of the Memphis aquifer shows that water levels were anomalously high just north of the landfill, indicating downward leakage of water from the alluvial aquifer to the Memphis aquifer. An analysis of water-quality data for major and trace inorganic constituents and nutrients confirms that leachate from the landfill has migrated northeastward in the alluvial aquifer toward the depression in the water table and that contaminants in the alluvial aquifer have migrated downward into the Memphis aquifer. The leachate plume can be characterized by concentrations of certain major and trace inorganic constituents that are 2 to 20 times higher than samples from upgradient and background alluvial aquifer wells. The major and trace constituents that best characterize the leachate plume are total organic carbon, chloride, dissolved solids, iron, ammonia nitrogen, calcium, sodium, iodide, barium, strontium, boron, and cadmium. Several of these constituents (specifically dissolved solids, calcium, sodium, and possibly ammonia nitrogen, chloride, barium, and strontium) were detected in elevated concentrations in samples from certain Memphis aquifer wells. Elevated concentrations were detected in samples from the Memphis aquifer beneath the leachate plume where the confining unit is thin or absent. The distribution of halogenated alkanes (specifically dichlorodifluoromethane and trichlorofluoromethane) and halogenated alkenes (specifically 1,2-trans-dichloroethene and vinyl chloride) in samples from wells screened in both the alluvial and Memphis aquifers is similar to the distribution of major and trace inorganic constituents that characterize the leachate plume. The ground-water supply most susceptible to contamination from the Shelby County landfill is the Sheahan well field of the Memphis Light, Gas and Water Division. This well field is about 5 miles downgradient from the landfill in the direction of ground-water flow. Based on an estimated velocity of 0.5 to 1.5 feet per day, ground water would require about 50 to 150 years to travel from the Shelby County landfill to the Sheahan wellfield. Given the time and distance of transport, any contaminants in the ground water would not likely persistto reach this well field because of the effects of various physical, chemical, and biological processes, including dilution and adsorption.

Tennessee↗
USGS2017

Effects of isolation on ant assemblages depend on microhabitat

How isolation affects biological communities is a fundamental question in ecology and conservation biology. Local diversity (α) and regional diversity (γ) are consistently lower in insular areas. The pattern of species turnover (β diversity) and the influence of isolation on competitive interactions are less predictable. Differences in communities across microhabitats within an isolated patch could contribute to the variability in patterns related to isolation. Trees form characteristically dense and sparse patches (low vs. high isolation) in floating marshes in coastal Louisiana, and canopy and root areas around these trees could support distinct ant communities. Consequently, trees in floating marshes provide an ideal environment to study the effects of isolation on community assemblages in different microhabitats. We sampled ant communities in 120 trees during the summer of 2016. We found ant α diversity was not different between the canopy and roots, and the magnitude and directional effects of isolation on ants were inconsistent between the canopy and root areas. In the roots of sparse sites, ant diversity (α, β, and γ) was lower, species composition was changed, and the signature of interspecific competition was more prominent compared to dense sites. In the canopy, however, significant differences between dense and sparse sites were only detected in α and γ diversity, and ant species co‐occurrence was not significantly different from a random distribution. The inconsistent responses of ants in canopy and root areas to isolation may be due to the differences of species pool size, environmental harshness, and species interactions between strata. In addition, these findings indicate that communities in distinct microenvironments can respond differentially to habitat isolation. We suggest incorporating organisms from different microhabitats into future research to better understand the influence of isolation on the assembly of biological communities.

Ecosphere↗
USGS2002

Nutrient dynamics in five off-stream reservoirs in the lower South Platte River basin, March-September 1995

In 1995, the U.S. Geological Survey conducted a study to characterize nutrient concentrations in five off-stream reservoirs in the lower South Platte River Basin?Riverside, Jackson, Prewitt, North Sterling, and Julesburg. These reservoirs are critical sources of irrigation water for agricultural areas, and several also are used for fishing, boating, swimming, hunting, and camping. Data collected for this study include depth profiles of water temperature, dissolved oxygen, pH, and specific conductance; nutrient species concentrations in the water column, bottom sediment, and inflow and outflow canals; and chlorophyll-a concentrations in the water column. Data were collected during the irrigation season from March through September 1995 at five sites each in Riverside, Jackson, Prewitt, and Julesburg Reservoirs and at six sites in North Sterling Reservoir. The five reservoirs studied are located in similar geographic, climatic, and land-use areas and, as a result, have a number of similarities in their internal nutrient dynamics. Nitrogen concentrations in the reservoirs were highest in March and decreased through September as a result of dilution from river inflows and biological activity. From March through June, decreases in nitrogen concentrations in the river and biological activity contributed to decreases in reservoir concentrations. From July through September, inflows from the river were cut off, and biological activity in the reservoirs led to further decreases in nitrate concentrations, which fell to near or below detectable levels. Phosphorus concentrations in the reservoirs did not show the same consistent decrease from March through September. Phosphorus likely was recycled continuously back to algae during the study period through processes such as excretion from fish, decay of aquatic plants and animals, and release of orthophosphate from bottom sediment during periods of low oxygen. With the exception of phosphorus in Jackson Reservoir, the reservoirs acted as a sink for both nitrogen and phosphorus; the percentage of the total mass (initial storage plus inflows) trapped in the reservoirs during the study period ranged from 49 to 88 percent for nitrogen and from 20 to 86 percent for phosphorus. The nutrient loading, morphology, and operation of the five reservoirs differed, however, leading to several important differences in nutrient dynamics among the reservoirs. Mean nutrient concentrations during the study period decreased in a downstream direction from Riverside Reservoir to Julesburg Reservoir because concentrations in the source water?the South Platte River?decreased downstream as a result of increased distance from wastewater loading upstream from Kersey, Colorado, and the replacement of diverted river water with more dilute ground-water return flow. North Sterling was an exception to this decrease; the strong stratification and resulting anoxia that developed in the reservoir led to nutrient release from the bottom sediments that offset the decrease in external nutrient loading. Variations in nutrient loading also contributed to differences in the nutrient limiting algal growth in the reservoirs, as indicated by mass nitrogen:phosphorus ratios. In Riverside and Jackson Reservoirs, nitrogen became the potential limiting nutrient by midsummer as biological activity depleted the available supply of nitrogen while the high initial phosphorus load was recycled. Prewitt, North Sterling, and Julesburg Reservoirs, with lower initial loadings of phosphorus, were phosphorus-limited throughout the study period, with additional colimitation of nitrogen as biological uptake reduced nitrogen concentrations to near or below laboratory detection limits. The percentage of the total nitrogen and phosphorus mass lost through outflow and trapped in the reservoir due to processes such as biological uptake and sedimentation varied between reservoirs.Generally, reservoirs with short residence times such as North Ste

Water-Resources Investigations Report↗
USGS2024

River herring influence perch morphology, physiology, and life history

Anadromous fishes play important roles in nutrient dynamics for freshwater ecosystems; however, the trophic pathways have been less documented for iteroparous species like river herring ( Alosa pseudoharengus and A. aestivalis ) compared to semelparous species like Pacific salmon ( Oncorhynchus spp.). Given recent increases in restoration activities to improve connectivity, an understanding of how anadromous river herring influence the morphology, physiology, and life history of predatory fishes can help predict restoration responses. We aimed to quantify the trophic influence of juvenile anadromous river herring on predatory white perch ( Morone americana ) and yellow perch ( Perca flavescens ) using a combination of stable isotopes, growth rates, and condition indices. We sampled six lakes in coastal Massachusetts—three lakes with anadromous river herring and three similar lakes without river herring. Bayesian mixing models of δ 13 C and δ 15 N indicated white perch consumed juvenile river herring in higher proportions (69–75%) compared to co-occurring prey fishes (11–16%). Lakes with juvenile river herring contained perch with significantly higher condition values, higher immature growth rates (age 1 and 2), lower mature growth rates (> age 3), significantly smaller mature lengths, and lower mortality rates compared to perch in lakes without river herring. These divergent life history traits of perch in response to consumption of juvenile river herring are consistent with observations in other predatory fishes. Direct links between river herring and predator condition, growth, and life history trajectories suggest broad influences on ecosystem structure across trophic levels through physiological, morphometric, and life history modifications.

Massachusetts↗
USGS2019

Satellite-detected forest disturbance forecasts American marten population decline: The case for supportive space-based monitoring

Limited monitoring resources often constrain rigorous monitoring practices to species or populations of conservation concern. Insufficient monitoring can induce a tautology as lack of monitoring resources makes it difficult to determine whether a species or population deserves additional monitoring resources. When in-situ monitoring resources are limited, remote habitat monitoring could be a useful supplementary tool, as linking parameterized species distribution models to spatially explicit time-series of environmental correlates allows iterative prediction of population change. Yet the performance of predictive forecasts or hindcasts has been difficult to evaluate. We paired contemporary field data, historic population estimates, and a remotely-sensed archive of landscape change to evaluate predictions of American marten ( Martes americana ) population decline owing to habitat loss in Maine, USA. We estimated contemporary spatial patterns in marten density relative to landscape disturbance with spatial capture-recapture models. We compared current density estimates to historical density calculations to evaluate population decline, and compared historical calculations to habitat-based model predictions to evaluate the efficacy of habitat monitoring as a proxy for direct monitoring. Marten density was negatively associated with the proportion of surrounding regenerating forest, and point estimates within focal townships were 50–80% lower than historical calculations. Habitat-based hindcasts of marten density across our entire focal area interest suggested a smaller population decline (roughly 50%) within our focal area. Thus, although habitat-based predictions underpredicted marten decline, they provided correct directional inference. Habitat monitoring and predictions from species distribution models may provide useful inference about population changes given trends in habitat at limited expense when in-situ information is lacking.

Maine↗
USGS2016

Mechanistic variables can enhance predictive models of endotherm distributions: The American pika under current, past, and future climates

How climate constrains species’ distributions through time and space is an important question in the context of conservation planning for climate change. Despite increasing awareness of the need to incorporate mechanism into species distribution models (SDMs), mechanistic modeling of endotherm distributions remains limited in this literature. Using the American pika ( Ochotona princeps ) as an example, we present a framework whereby mechanism can be incorporated into endotherm SDMs. Pika distribution has repeatedly been found to be constrained by warm temperatures, so we used Niche Mapper, a mechanistic heat-balance model, to convert macroclimate data to pika-specific surface activity time in summer across the western United States. We then explored the difference between using a macroclimate predictor (summer temperature) and using a mechanistic predictor (predicted surface activity time) in SDMs. Both approaches accurately predicted pika presences in current and past climate regimes. However, the activity models predicted 8–19% less habitat loss in response to annual temperature increases of ~3–5 °C predicted in the region by 2070, suggesting that pikas may be able to buffer some climate change effects through behavioral thermoregulation that can be captured by mechanistic modeling. Incorporating mechanism added value to the modeling by providing increased confidence in areas where different modeling approaches agreed and providing a range of outcomes in areas of disagreement. It also provided a more proximate variable relating animal distribution to climate, allowing investigations into how unique habitat characteristics and intraspecific phenotypic variation may allow pikas to exist in areas outside those predicted by generic SDMs. Only a small number of easily obtainable data are required to parameterize this mechanistic model for any endotherm, and its use can improve SDM predictions by explicitly modeling a widely applicable direct physiological effect: climate-imposed restrictions on activity. This more complete understanding is necessary to inform climate adaptation actions, management strategies, and conservation plans.

Global Change Biology↗
USGS2015

Examining the utility of bulk otolith δ13C to describe diet in wild-caught black rockfish Sebastes melanops

Otolith carbon isotope δ 13 C values may provide temporally resolved diet proxies in fish. If otolith δ 13 C values reflect diet, isotope values from recent otolith and muscle tissue should correlate and known ontogenetic diet shifts should be reflected in comparisons between otolith material deposited during different life history stages. We analyzed paired otolith and muscle samples for δ 13 C from black rockfish Sebastes melanops to examine the potential of otoliths to reflect diet in small (200-299 mm fork length) and large (≥300 mm) fish. We found a significant positive regression between δ 13 C values from recent (~12 mo) otolith material and muscle in large fish, but not in small fish. Within individual otoliths, δ 13 C values were enriched by ~3‰ in recent otolith edge material compared to age-0 otolith core material and were consistent with known nearshore-offshore gradients in δ 13 C values at the base of the food web. Bulk otolith δ 13 C appeared to provide a broad indicator of dietary carbon sources, but variation in metabolism and dissolved inorganic carbon δ 13 C among and within individuals likely influences otolith δ 13 C as well and limits precision. Nevertheless, the results are promising and bulk otolith δ 13 C may be an appropriate tool to examine large trophic and ecosystem level shifts that have occurred concurrently with changes in habitat, commercial fishing, invasive species, climate change, and other direct or indirect human impacts using historic or ancient otoliths. Future studies should continue to consider the utility of bulk otolith δ 13 C to describe diet in other marine fish using this simple approach.

Aquatic Biology↗
USGS2011

Vulnerability of riparian ecosystems to elevated CO 2 and climate change in arid and semiarid western North America

Riparian ecosystems, already greatly altered by water management, land development, and biological invasion, are being further altered by increasing atmospheric CO 2 concentrations ([CO 2 ]) and climate change, particularly in arid and semiarid (dryland) regions. In this literature review, we (1) summarize expected changes in [CO 2 ], climate, hydrology, and water management in dryland western North America, (2) consider likely effects of those changes on riparian ecosystems, and (3) identify critical knowledge gaps. Temperatures in the region are rising and droughts are becoming more frequent and intense. Warmer temperatures in turn are altering river hydrology: advancing the timing of spring snow melt floods, altering flood magnitudes, and reducing summer and base flows. Direct effects of increased [CO 2 ] and climate change on riparian ecosystems may be similar to effects in uplands, including increased heat and water stress, altered phenology and species geographic distributions, and disrupted trophic and symbiotic interactions. Indirect effects due to climate-driven changes in streamflow, however, may exacerbate the direct effects of warming and increase the relative importance of moisture and fluvial disturbance as drivers of riparian ecosystem response to global change. Together, climate change and climate-driven changes in streamflow are likely to reduce abundance of dominant, native, early-successional tree species, favor herbaceous species and both drought-tolerant and late-successional woody species (including many introduced species), reduce habitat quality for many riparian animals, and slow litter decomposition and nutrient cycling. Climate-driven changes in human water demand and associated water management may intensify these effects. On some regulated rivers, however, reservoir releases could be managed to protect riparian ecosystem. Immediate research priorities include determining riparian species' environmental requirements and monitoring riparian ecosystems to allow rapid detection and response to undesirable ecological change.

Global Change Biology↗
USGS2023

Evolutionary fire ecology: An historical account and future directions

The idea that fire acts as an evolutionary force contributing to shaping species traits started a century ago, but had not been widely recognized until very recently. Among the first to realize this force were E dward B . Poulton, R. D ale Guthrie, and E dwin V . Komarek in animals and W illis L . Jepson, W alter W . Hough, T om M . Harris, P hilip V . Wells, and R obert W . Mutch in plants. They were all ahead of their time in their evolutionary thinking. Since then, evolutionary fire ecology has percolated very slowly into the mainstream ecology and evolutionary biology; in fact, this topic is still seldom mentioned in textbooks of ecology or evolution. Currently, there is plenty of evidence suggesting that we cannot understand the biodiversity of our planet without considering the key evolutionary role of fire. But there is still research to be done in order to fully understand fire's contribution to species evolution and to predicting species responses to rapid global changes.

BioScience↗
USGS2007

Chapter B. Physical, Chemical, and Biological Responses of Streams to Increasing Watershed Urbanization in the Piedmont Ecoregion of Georgia and Alabama, 2003

As part of the U.S. Geological Survey National Water-Quality Assessment Program?s effort to assess the physical, chemical, and biological responses of streams to urbanization, 30 wadable streams were sampled near Atlanta, Ga., during 2002?2003. Watersheds were selected to minimize natural factors such as geology, altitude, and climate while representing a range of urban development. A multimetric urban intensity index was calculated using watershed land use, land cover, infrastructure, and socioeconomic variables that are highly correlated with population density. The index was used to select sites along a gradient from low to high urban intensity. Response variables measured include stream hydrology and water temperature, instream habitat, field properties (pH, conductivity, dissolved oxygen, turbidity), nutrients, pesticides, suspended sediment, sulfate, chloride, Escherichia coli (E. coli) concentrations, and characterization of algal, invertebrate and fish communities. In addition, semipermeablemembrane devices (SPMDs)?passive samplers that concentrate hydrophobic organic contaminants such as polycyclicaromatic hydrocarbons (PAHs)?were used to evaluate water-quality conditions during the 4 weeks prior to biological sampling. Changes in physical, chemical, and biological conditions were evaluated using both nonparametric correlation analysis and nonmetric multidimensional scaling (MDS) ordinations and associated comparisons of dataset similarity matrices. Many of the commonly reported effects of watershed urbanization on streams were observed in this study, such as altered hydrology and increases in some chemical constituent levels. Analysis of water-chemistry data showed that specific conductance, chloride, sulfate, and pesticides increased as urbanization increased. Nutrient concentrations were not directly correlated to increases in development, but were inversely correlated to percent forest in the watershed. Analyses of SPMD-derived data showed that bioassays and certain chemical constituents such as pyrene and benzophenanthrene, both PAHs found in coal tar, were strongly correlated with measures of watershed urbanization. Hydrologic variability metrics indicated that as urban development increased, streams became flashier, with characteristic high flows having shorter duration. The hydrologic effects associated with urbanization were greatest during the fall and least apparent during the winter. No correlations were observed between increasing urbanization and stream temperature or changes in stream habitat. Algal, invertebrate, and fish communities exhibited statistically significant changes as watersheds became increasingly urban, with the strongest responses observed in the invertebrate community followed by fishes, then algal diatom communities. Invertebrate communities were the most responsive to increasing urbanization with Ephemeroptera, Plecoptera, and Tricoptera taxa, especially Plecoptera (stoneflies) responding negatively and most strongly to increasing urbanization. Invertebrate communities were influenced more significantly by water quality, although significant responses to altered hydrology also were noted. In terms of the fish community, the percentage of cyprinids present in the stream was the only Index of Biotic Integrity metric that responded negatively to increases in watershed urbanization. Fish community response to urbanization was intermediate relative to algae and invertebrates with respect to significant metric responses as well as the overall community response to increasing urbanization. Measures of hydrologic variability were the most influential environmental variables affecting the algal community. Although sites were originally chosen to represent a gradient of increasing urbanization, a cluster analysis performed on the component metrics of the urban index categorized sites into four distinct groups. Multivariate analysis based on nonmetric MDS and related analyses of data ma

Alabama, Georgia↗
USGS2024

Phenotypic homogenization and potential fitness constraints following non-native introgression in an endemic sportfish

Introgressive hybridization may lead to contrasting evolutionary outcomes that are difficult to predict since they depend on the fitness effects of endogenous genomic interactions and environmental factors. Conservation of endemic biodiversity may be more effective with require direct measurement of introgressed ancestry and fitness in wild populations, especially for keystone taxa at risk of hybridization following species introductions. We assessed the relationship of non-native ancestry with growth and body condition in the basin-restricted Neosho Bass ( Micropterus velox ; NB), focussing on two streams in the NB native range that are admixed extensively with non-native Smallmouth Bass ( M. dolomieu ; SMB). We quantified the genetic composition of 116 fish from Big Sugar Creek ( N = 46) and Elk River ( N = 70) at 14 microsatellite loci. Using back-calculated total length-at-age estimated from sagittal otoliths, we assessed whether genetic ancestry explained variation in von Bertalanffy growth model parameters, accounting for sex and stream effects. We then assessed the relationship between ancestry and body condition. We found no differences in growth parameters by sex, stream, or ancestry, suggesting phenotypic homogenization which could be mediated by selection on body size. We found a negative correlation between SMB ancestry and condition, including lower condition in Big Sugar Creek, possibly reflecting a trade-off between maximum length and condition with respect to overall fitness. We show that ongoing non-native introgression, which may be augmented by anthropogenic SMB introductions, may attenuate evolutionary differentiation between species and directly influence fitness, possibly having critical implications for long-term persistence and management of adaptive potential in a popular and ecologically important endemic sportfish.

Journal of Evolutionary Biology↗
USGS2013

Wildlife connectivity approaches and best practices in U.S. state wildlife action plans

As habitat loss and fragmentation threaten biodiversity on large geographic scales, creating and maintaining connectivity of wildlife populations is an increasingly common conservation objective. To assess the progress and success of large-scale connectivity planning, conservation researchers need a set of plans that cover large geographic areas and can be analyzed as a single data set. The state wildlife action plans (SWAPs) fulfill these requirements. We examined 50 SWAPs to determine the extent to which wildlife connectivity planning, via linkages, is emphasized nationally. We defined linkage as connective land that enables wildlife movement. For our content analysis, we identified and quantified 6 keywords and 7 content criteria that ranged in specificity and were related to linkages for wide-ranging terrestrial vertebrates and examined relations between content criteria and statewide data on focal wide-ranging species, spending, revenue, and conserved land. Our results reflect nationwide disparities in linkage conservation priorities and highlight the continued need for wildlife linkage planning. Only 30% or less of the 50 SWAPs fulfilled highly specific content criteria (e.g., identifying geographic areas for linkage placement or management). We found positive correlations between our content criteria and statewide data on percent conserved land, total focal species, and spending on parks and recreation. We supplemented our content analysis with interviews with 17 conservation professionals to gain specific information about state-specific context and future directions of linkage conservation. Based on our results, relevant literature, and interview responses, we suggest the following best practices for wildlife linkage conservation plans: collect ecologically meaningful background data; be specific; establish community-wide partnerships; and incorporate sociopolitical and socioeconomic information.

Conservation Biology↗
USGS2013

Parasites affect food web structure primarily through increased diversity and complexity

Comparative research on food web structure has revealed generalities in trophic organization, produced simple models, and allowed assessment of robustness to species loss. These studies have mostly focused on free-living species. Recent research has suggested that inclusion of parasites alters structure. We assess whether such changes in network structure result from unique roles and traits of parasites or from changes to diversity and complexity. We analyzed seven highly resolved food webs that include metazoan parasite data. Our analyses show that adding parasites usually increases link density and connectance (simple measures of complexity), particularly when including concomitant links (links from predators to parasites of their prey). However, we clarify prior claims that parasites ‘‘dominate’’ food web links. Although parasites can be involved in a majority of links, in most cases classic predation links outnumber classic parasitism links. Regarding network structure, observed changes in degree distributions, 14 commonly studied metrics, and link probabilities are consistent with scale-dependent changes in structure associated with changes in diversity and complexity. Parasite and free-living species thus have similar effects on these aspects of structure. However, two changes point to unique roles of parasites. First, adding parasites and concomitant links strongly alters the frequency of most motifs of interactions among three taxa, reflecting parasites’ roles as resources for predators of their hosts, driven by trophic intimacy with their hosts. Second, compared to free-living consumers, many parasites’ feeding niches appear broader and less contiguous, which may reflect complex life cycles and small body sizes. This study provides new insights about generic versus unique impacts of parasites on food web structure, extends the generality of food web theory, gives a more rigorous framework for assessing the impact of any species on trophic organization, identifies limitations of current food web models, and provides direction for future structural and dynamical models.

PLoS Biology↗
USGS1990

North American Breeding Bird Survey Annual Summary, 1989

The North American Breeding Bird Survey (BBS) is run by approximately 2,000 skilled amateur ornithologists and is coordinated cooperatively by the U.S. Fish and Wildlife Service and the Canadian Wildlife Service. Since 1966, BBS cooperators have been collecting standardized information on North American bird populations. The BBS is a roadside survey, comprised of permanent routes that are surveyed yearly. Each route is 39.4 km (24.5 miles) long and consists of 50 stops spaced 0.8 km (0.5 mile) apart. All birds heard or seen during a 3-min observation period at each stop are recorded, and, for each species, the sum of the counts on individual stops is used as an index of species density on the route. Survey routes occur throughout the continental United States and most of Canada. Here, we present the population changes of the 251 bird species reported on the 50 or more BBS routes in the survey region during 1988 and 1989. Population trends for 1966-89 are presented for comparison. The direction and significance of population changes between the years for the 306 species occurring on 10 or more routes within States and Provinces are summarized in Appendix B. The pattern of population changes for selected species is graphically summarized on maps by physiographic stratum.

Biological Report↗
USGS2022

Wildfire influences individual growth and breeding dispersal, but not survival and recruitment in a montane amphibian

Global wildfire regimes are changing rapidly, with widespread increases in the size, frequency, duration, and severity of wildfires. Whereas the effects of wildfire on ecological state variables such as occupancy, abundance, and species diversity are relatively well documented, changes in population vital rates (e.g., survival, recruitment) and individual responses (e.g., growth, movement) to wildfire are more limited because of the detailed information needed on the same individuals both pre- and post-fire. We capitalized on the 2018 Roosevelt wildfire, which occurred during our 6-year (2015–2020) capture–mark–recapture study of boreal toads ( Anaxyrus boreas boreas ; n = 1415) in the Bridger-Teton National Forest, USA, to evaluate the responses of population vital rates and individual metrics to wildfire. We employed robust design capture–recapture models to compare the growth, dispersal, survival, and recruitment of adult boreal toads pre- and post-fire at burned versus unburned sites. At burned locations, growth increased 2 years post-fire compared with the year directly following wildfire and was higher 2 years post-fire than any other interval during our study period. Boreal toads dispersed to alternative breeding patches more at burned sites than unburned sites and dispersal increased 2 years post-fire compared with the year directly following wildfire. Annual survival and recruitment neither differed between pre- and post-fire years nor among pre-fire years, the year following wildfire, and 2 years post-fire. We demonstrate that, in certain contexts, dispersal can play a major role in changes to state variables (e.g., abundance) after wildfire, as opposed to other vital rates such as survival and recruitment. Our study represents an important step toward understanding the biological processes that underlie observed patterns in state variables following wildfire, which ultimately will be critical for the effective management of species in landscapes experiencing shifts in fire activity.

Wyoming↗