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Scale criticality in estimating ecosystem carbon dynamics

Scaling is central to ecology and Earth system sciences. However, the importance of scale (i.e. resolution and extent) for understanding carbon dynamics across scales is poorly understood and quantified. We simulated carbon dynamics under a wide range of combinations of resolution (nine spatial resolutions of 250 m, 500 m, 1 km, 2 km, 5 km, 10 km, 20 km, 50 km, and 100 km) and extent (57 geospatial extents ranging from 108 to 1 247 034 km 2 ) in the southeastern United States to explore the existence of scale dependence of the simulated regional carbon balance. Results clearly show the existence of a critical threshold resolution for estimating carbon sequestration within a given extent and an error limit. Furthermore, an invariant power law scaling relationship was found between the critical resolution and the spatial extent as the critical resolution is proportional to A n ( n is a constant, and A is the extent). Scale criticality and the power law relationship might be driven by the power law probability distributions of land surface and ecological quantities including disturbances at landscape to regional scales. The current overwhelming practices without considering scale criticality might have largely contributed to difficulties in balancing carbon budgets at regional and global scales.

Global Change Biology

Wildfire and aspect effects on hydrologic states after the 2010 Fourmile Canyon Fire

Wildfire can change how soils take in, store, and release water. This study examined differences in how burned and unburned plots on north versus south-facing slope aspects respond to rainfall. The largest wildfire impacts were litter/duff combustion on burned north-facing slopes versus soil-water retention reduction on burned south-facing slopes. Wildfire is one of the most significant disturbances in mountainous landscapes, affecting water supply and ecologic function and setting the stage for natural hazards such as flash floods. The impacts of wildfire can affect the entire hydrologic cycle. Measurements of soil-water content and matric potential in the near surface (top 30 cm) captured the hydrologic state in both burned and unburned hillslopes during the first spring through fall period (1 June–1 Oct. 2011) after the 2010 Fourmile Canyon Fire near Boulder, CO. This time span included different hydrologic periods characterized by cyclonic frontal storms (low-intensity, long duration), convective storms (high-intensity, short duration), and dry periods. In mountainous environments, aspect can also control hydrologic states, so north- vs. south-facing slopes were compared. Wildfire tended to homogenize soil-water contents across aspects and with depth in the soil, yet it also may have introduced an aspect control on matric potential that was not observed in unburned soils. Post-wildfire changes in hydrologic state were observed in south-facing soils, probably reflecting decreased soil-water retention after wildfire. North-facing soils were impacted the most, in terms of hydrologic state, by the loss of water storage in the combusted litter–duff layer and forest canopy, which had provided a large “hydrologic buffering” capacity when unburned. Unsaturated zone measurements showed increased variability in hydrologic states and more rapid state transitions in wildfire-impacted soils. A simple, qualitative analysis suggested that the range of unsaturated-zone processes along the gravity–capillarity–adsorption continuum was expanded by wildfire for a given soil. The small number of experimental plots in this study suggests that further work is needed before these conclusions can be generalized to other geographic areas.

Vadose Zone Journal

Net primary productivity of subalpine meadows in Yosemite National Park in relation to climate variability

Subalpine meadows are some of the most ecologically important components of mountain landscapes, and primary productivity is important to the maintenance of meadow functions. Understanding how changes in primary productivity are associated with variability in moisture and temperature will become increasingly important with current and anticipated changes in climate. Our objective was to describe patterns and variability in aboveground live vascular plant biomass in relation to climatic factors. We harvested aboveground biomass at peak growth from four 64-m 2 plots each in xeric, mesic, and hydric meadows annually from 1994 to 2000. Data from nearby weather stations provided independent variables of spring snow water content, snow-free date, and thawing degree days for a cumulative index of available energy. We assembled these climatic variables into a set of mixed effects analysis of covariance models to evaluate their relationships with annual aboveground net primary productivity (ANPP), and we used an information theoretic approach to compare the quality of fit among candidate models. ANPP in the xeric meadow was negatively related to snow water content and thawing degree days and in the mesic meadow was negatively related to snow water content. Relationships between ANPP and these 2 covariates in the hydric meadow were not significant. Increasing snow water content may limit ANPP in these meadows if anaerobic conditions delay microbial activity and nutrient availability. Increased thawing degree days may limit ANPP in xeric meadows by prematurely depleting soil moisture. Large within-year variation of ANPP in the hydric meadow limited sensitivity to the climatic variables. These relationships suggest that, under projected warmer and drier conditions, ANPP will increase in mesic meadows but remain unchanged in xeric meadows because declines associated with increased temperatures would offset the increases from decreased snow water content.

Western North American Naturalist

Mapping new terrain climate change and America’s West: Anticipating challenges to western mountain ecosystems and resources

Climate variability and sustained change presage far-reaching transformations across America’s West, an expanse dominated by immense mountain ranges and interspersed with important urban centers. These mountains provide the region’s life blood—water that courses through its streams and runs out its faucets, power that fuels its industries and lights its cities, and natural resources that feed its economy and provide many of its jobs. The West is a land where life is written in water—from vast ranchlands and farmlands, to large densely populated urban areas—and the communities of the West are intricately tied to it. Why should we be concerned about how climate change is affecting the mountains? Despite their imposing grandeur and apparent fortitude, the mountains contain highly sensitive environments that support delicately balanced physical and natural systems. A warming of only a few degrees has major implications for mountain regions—for the integrity of the seasonal snowpack, the extensive forests that western mountains support, and for the people who make their home there. Such changes are already affecting water supply, energy availability, fire severity, and recreational opportunities. Continuing climate change may significantly alter the western landscape, where one encounters distinct ecological communities as successive layers from the lowlands to the high peaks. Each of these ecosystems has specific requirements for temperature and precipitation. As climate variability increases and global warming continues, complex changes in montane plant and animal communities will occur, increasing vulnerability of species to dramatic shifts in distribution and local extinctions.

Report

Evaluating density-weighted connectivity of black bears (Ursus americanus) in Glacier National Park with spatial capture–recapture models

Background Improved understanding of wildlife population connectivity among protected area networks can support effective planning for the persistence of wildlife populations in the face of land use and climate change. Common approaches to estimating connectivity often rely on small samples of individuals without considering the spatial structure of populations, leading to limited understanding of how individual movement links to demography and population connectivity. Recently developed spatial capture-recapture (SCR) models provide a framework to formally connect inference about individual movement, connectivity, and population density, but few studies have applied this approach to empirical data to support connectivity planning. Methods We used mark-recapture data collected from 924 genetic detections of 598 American black bears ( Ursus americanus ) in 2004 with SCR ecological distance models to simultaneously estimate density, landscape resistance to movement, and population connectivity in Glacier National Park northwest Montana, USA. We estimated density and movement parameters separately for males and females and used model estimates to calculate predicted density-weighted connectivity surfaces. Results Model results indicated that landscape structure influences black bear density and space use in Glacier. The mean density estimate was 16.08 bears/100 km 2 (95% CI 12.52–20.6) for females and 9.27 bears/100 km 2 (95% CI 7.70–11.14) for males. Density increased with forest cover for both sexes. For male black bears, density decreased at higher grizzly bear ( Ursus arctos ) densities. Drainages, valley bottoms, and riparian vegetation decreased estimates of landscape resistance to movement for male and female bears. For males, forest cover also decreased estimated resistance to movement, but a transportation corridor bisecting the study area strongly increased resistance to movement presenting a barrier to connectivity. Conclusions Density-weighed connectivity surfaces highlighted areas important for population connectivity that were distinct from areas with high potential connectivity. For black bears in Glacier and surrounding landscapes, consideration of both vegetation and valley topography could inform the placement of underpasses along the transportation corridor in areas characterized by both high population density and potential connectivity. Our study demonstrates that the SCR ecological distance model can provide biologically realistic, spatially explicit predictions to support movement connectivity planning across large landscapes.

Montana

Fire and forests in the 21st century: Managing resilience under changing climates and fire regimes in USA forests

Higher temperatures, lower snowpacks, drought, and extended dry periods have contributed to increased wildfire activity in recent decades. Climate change is expected to increase the frequency of large fires, the cumulative area burned, and fire suppression costs and risks in many areas of the USA. Fire regimes are likely to change due to interactions among climate, fire, and other stressors and disturbances; resulting in persistent changes in forest structure and function. The remainder of the twenty-first century will present substantial challenges, as natural resource managers are faced with higher fire risk and the difficult task of maintaining ecological function in a rapidly changing biophysical and social landscape. Fuel treatments will continue to be important for minimizing the undesirable ecological effects of fire, and for enhancing firefighter safety; however, treatments must be implemented strategically across large areas. Collaboration among agencies, private landowners, and other organizations will be critical for ensuring resilience and sustainable forest management.

Book chapter

Landscape genomics of Sphaeralcea ambigua in the Mojave Desert: a multivariate, spatially-explicit approach to guide ecological restoration

Local adaptation influences plant species’ responses to climate change and their performance in ecological restoration. Fine-scale physiological or phenological adaptations that direct demographic processes may drive intraspecific variability when baseline environmental conditions change. Landscape genomics characterize adaptive differentiation by identifying environmental drivers of adaptive genetic variability and mapping the associated landscape patterns. We applied such an approach to Sphaeralcea ambigua , an important restoration plant in the arid southwestern United States, by analyzing variation at 153 amplified fragment length polymorphism loci in the context of environmental gradients separating 47 Mojave Desert populations. We identified 37 potentially adaptive loci through a combination of genome scan approaches. We then used a generalized dissimilarity model (GDM) to relate variability in potentially adaptive loci with spatial gradients in temperature, precipitation, and topography. We identified non-linear thresholds in loci frequencies driven by summer maximum temperature and water stress, along with continuous variation corresponding to temperature seasonality. Two GDM-based approaches for mapping predicted patterns of local adaptation are compared. Additionally, we assess uncertainty in spatial interpolations through a novel spatial bootstrapping approach. Our study presents robust, accessible methods for deriving spatially-explicit models of adaptive genetic variability in non-model species that will inform climate change modelling and ecological restoration.

California, Nevada

Population structure of Columbia spotted frogs ( Rana luteiventris ) is strongly affected by the landscape

Landscape features such as mountains, rivers, and ecological gradients may strongly affect patterns of dispersal and gene flow among populations and thereby shape population dynamics and evolutionary trajectories. The landscape may have a particularly strong effect on patterns of dispersal and gene flow in amphibians because amphibians are thought to have poor dispersal abilities. We examined genetic variation at six microsatellite loci in Columbia spotted frogs ( Rana luteiventris ) from 28 breeding ponds in western Montana and Idaho, USA, in order to investigate the effects of landscape structure on patterns of gene flow. We were particularly interested in addressing three questions: (i) do ridges act as barriers to gene flow? (ii) is gene flow restricted between low and high elevation ponds? (iii) does a pond equal a 'randomly mating population' (a deme)? We found that mountain ridges and elevational differences were associated with increased genetic differentiation among sites, suggesting that gene flow is restricted by ridges and elevation in this species. We also found that populations of Columbia spotted frogs generally include more than a single pond except for very isolated ponds. There was also evidence for surprisingly high levels of gene flow among low elevation sites separated by large distances. Moreover, genetic variation within populations was strongly negatively correlated with elevation, suggesting effective population sizes are much smaller at high elevation than at low elevation. Our results show that landscape features have a profound effect on patterns of genetic variation in Columbia spotted frogs.

Idaho, Montana

Deformity, erosion, lesion, tumor, and parasite (DELT) anomalies in fish communities of the Chesapeake Bay watershed, USA: A regional assessment and potential landscape drivers

Fish diseases in freshwater ecosystems pose significant ecological and socioeconomic challenges, yet monitoring them in wild populations is complex due to interactions between pathogens, hosts, and environmental conditions. We examine the prevalence and watershed-scale landscape drivers of external deformity, erosion, lesion, tumor, and parasite (DELT) anomalies in 57 riverine fish species using a large dataset (577,266 individuals collected 2008–2019) from the Chesapeake Bay watershed that originated from state and federal agencies. Overall, DELT prevalence was low (1.4%), but was higher in larger, longer-lived species, including Channel Catfish ( Ictalurus punctatus ) (18.9%), Rock Bass ( Ambloplites rupestris ) (7.6%), Smallmouth Bass ( Micropterus dolomieu ) (7.3%), Brown Bullhead ( Ameiurus nebulosus ) (5.6%), and Yellow Bullhead ( Ameiurus natalis ) (5.1%), signifying their potential as regional environmental health indicators. Spatial analysis indicated warmer temperatures increased the estimated probability of DELT occurrence, whereas higher precipitation often mitigated the probability of DELT occurrence. Conservation strategies (e.g., best management practices) had mixed effectiveness in reducing DELT occurrence probability across agricultural and urban landscapes. Across the landscape, various drivers, including harvested forest, impervious land, and pesticide use, influenced DELT occurrence probability differently across species. However, uncertainty remains partly due to low prevalence and variability in sampling methods across agencies. Despite low overall prevalence, DELT occurrence is a rapid fish health indicator. Future research could emphasize species-specific responses and longitudinal studies that incorporate life stages and health indicators. Understanding these intricate, multi-scale interactions is vital for effective monitoring, conservation, and adaptive management of freshwater ecosystems.

Chesapeake Bay watershed

Predicting species-habitat relationships: Does body size matter?

Context. Allometric scaling laws are foundational to structuring processes from cellular to ecosystem levels. The idea that allometric relationships underlie species characteristic selection scales, the spatial scales at which species respond to landscape features, has recently been investigated, however, supporting empirical evidence is scarce. Objectives. Lack of pattern can be explained by inaccurate estimation, low power, confounding factors, or absence of a relationship. In this paper, we evaluate the relationship between body size and species characteristic selection scales after overcoming limitations of previous study designs. Methods. We conducted 1328 avian point counts across the state of Nebraska using the robust sampling design to account for imperfect detection. We used Bayesian latent indicator scale selection with N-mixture models to estimate species’ characteristic selection scales of six habitat features in 86 species. We propagated the uncertainty associated with assigning characteristic scales to a model of the relationship between body size and characteristic spatial scales. Results. Species characteristic scales varied across habitat predictors, and varied in the uncertainty associated with selecting single characteristic scales. After propagating uncertainty our results do not support a relationship between species’ body size and the spatial scales at which they respond to landscape features. Conclusions. As species abundance integrates birth, death, immigration, and emigration processes, each of which are influenced by ecological processes manifesting at various scales, we question whether a general allometric relationship should be expected. Our results suggest that selection may act on responses to specific environmental features, rather than response to spatial scale per se.

Landscape Ecology

Coastal sage scrub case study

In ecological applications of large-scale spatial data to management decisions concerning land planning and conservation, errors and biases may creep into the analysis and decision making at several steps (see Chaps. 1, 2, and 3), including: • Uncertainty in positions of spatial locations of relevant ecological and physiographic features of the landscape. • Uncertainty of the type and attributes of land cover at a particular location. • Uncertainty in how different land covers at a position in space and the geometric arrangement of land covers nearby might influence an animal species occurrence or distribution, or the magnitude of some ecological process. • Uncertainty about the relative importance of each spatial location to the overall success or persistence of a population or ecological process. • Uncertainty about how to weight each species or ecological process in determining the overall biodiversity and functioning of ecosystems, local and national resource priorities, and consistency with legislative mandates. We would like to be able to quantify the errors at each step, identify biases, and pass these along to the next analysis step so that our degree of uncertainty regarding potential outcomes is evident at each level (e.g., Stoms et al. 1992).

Book chapter

Coupling ecological and social network models to assess “transmission” and “contagion” of an aquatic invasive species

Network analysis is used to address diverse ecological, social, economic, and epidemiological questions, but few efforts have been made to combine these field-specific analyses into interdisciplinary approaches that effectively address how complex systems are interdependent and connected to one another. Identifying and understanding these cross-boundary connections improves natural resource management and promotes proactive, rather than reactive, decisions. This research had two main objectives; first, adapt the framework and approach of infectious disease network modeling so that it may be applied to the socio-ecological problem of spreading aquatic invasive species, and second, use this new coupled model to simulate the spread of the invasive Chinese mystery snail ( Bellamya chinensis ) in a reservoir network in Southeastern Nebraska, USA. The coupled model integrates an existing social network model of how anglers move on the landscape with new reservoir-specific ecological network models. This approach allowed us to identify 1) how angler movement among reservoirs aids in the spread of B . chinensis , 2) how B . chinensis alters energy flows within individual-reservoir food webs, and 3) a new method for assessing the spread of any number of non-native or invasive species within complex, social-ecological systems.

Journal of Environmental Management

Thresholds and hotspots for shrub restoration following a heterogeneous megafire

Context Reestablishing foundational plant species through aerial seeding is an essential yet challenging step for restoring the vast semiarid landscapes impacted by plant invasions and wildfire-regime shifts. A key component of the challenge stems from landscape variability and its effects on plant recovery. Objectives We assessed landscape correlates, thresholds, and tipping points for sagebrush presence from fine-scale sampling across a large, heterogeneous area burned the previous year, where we were able to quantify soil surface features that are typically occluded yet can strongly affect recovery patterns. Methods Hypothesis testing and binary-decision trees were used to evaluate factors affecting initial sagebrush establishment, using 2171 field plots (totaling ~ 2,000,000 m 2 sampled) over a 113,000-ha region. Results Sagebrush established in 50% of plots where it was seeded, a > 12-fold greater establishment frequency than in unseeded areas. Sagebrush establishment was enhanced in threshold-like ways by elevation (> 1200 m ASL), topographic features that alter heatload and soil water, and by soil-surface features such as “fertile islands” that bore the imprint of pre-fire sagebrush. Sagebrush occupancy had a negative, linear relationship with exotic-annual grass cover and parabolic relationship with perennial bunchgrasses (optimal at 40% cover). Conclusions Our approach revealed interactive, ecological relationships such as novel soil-surface effects on first year establishment of sagebrush across the burned landscape, and identified “hot spots” for recovery. The approach could be expanded across sites and years to provide the information needed to explain past seeding successes or failures, and in designing treatments at the landscape scale.

Idaho

Management foundations for navigating ecological transformation by resisting, accepting, or directing social-ecological change

Despite striking global change, management to ensure healthy landscapes and sustained natural resources has tended to set objectives on the basis of the historical range of variability in stationary ecosystems. Many social–ecological systems are moving into novel conditions that can result in ecological transformation. We present four foundations to enable a transition to future-oriented conservation and management that increases capacity to manage change. The foundations are to identify plausible social–ecological trajectories, to apply upstream and deliberate engagement and decision-making with stakeholders, to formulate management pathways to desired futures, and to consider a portfolio approach to manage risk and account for multiple preferences across space and time. We use the Kenai National Wildlife Refuge in Alaska as a case study to illustrate how the four foundations address common land management challenges for navigating transformation and deciding when, where, and how to resist, accept, or direct social–ecological change.

Alaska

Propagating observation errors to enable scalable and rigorous enumeration of plant population abundance with aerial imagery

Estimating and monitoring plant population size is fundamental for ecological research, as well as conservation and restoration programs. High-resolution imagery has potential to facilitate such estimation and monitoring. However, remotely sensed estimates typically have higher uncertainty than field measurements, risking biased inference on population status. We present a model that accounts for false negative (missed plants) and false positive (misclassified or double-counted plants) error in counts from high-resolution imagery via integration with ground data. We apply it to estimate the abundance of a foundational shrub species in post-wildfire landscapes in the western United States. In these landscapes, plant recruitment is crucial for ecological recovery but locally patchy, motivating the use of spatially extensive measurements from unoccupied aerial systems (UAS). Integrating >16 ha of UAS imagery with >700 georeferenced field plots, we fit our model to generate insights into the prevalence and drivers of observation errors associated with classification algorithms used to distinguish individual plants, relationships between abundance and landscape context, and to generate spatially explicit maps of shrub abundance. Raw counts of plant abundance in high-resolution imagery resulted in substantial false negative and false positive observation errors. The probability of detecting ( p ) adult plants (≥0.25 m tall) varied between sites within 0.52 < p̂adult < 0.82, whereas the detection of smaller plants (<0.25 m) was lower, 0.03 < p̂small < 0.3. On average, we estimate that 19% of all detected plants were false positive errors, which varied spatially in relation to topographic predictors. Abundance declined toward the interior of previous wildfires and was positively associated with terrain roughness. Our study demonstrates that integrated models accounting for imperfect detection improve estimates of plant population abundance derived from inherently imperfect UAS imagery. We believe such models will further improve inference on plant population dynamics—relevant to restoration, wildlife habitat and related objectives—and echo previous calls for remote sensing applications to better differentiate between ecological and observational processes.

Methods in Ecology and Evolution

Connecting and coordinating conservation action across landscapes through regional planning processes and syntheses

Modern threats to conservation are often global; however, relevant conservation decisions and actions typically occur within local jurisdictions. The socio-ecological complexity of these problems requires collaboration across large landscapes, diverse community interests, and geopolitical boundaries, yet a lack of interoperability of planning products among decision makers, jurisdictions, and objectives impedes collaboration. Here, we provide a working model for the collaborative, iterative development of a landscape conservation design (LCD) in the Midwest region of the United States, the Midwest Conservation Blueprint, and demonstrate its applicability to the coordination of voluntary conservation actions and investments across jurisdictional boundaries. We used spatial prioritization software to synthesize over 20 datasets to develop a basemap of priority lands and waters for conservation across a diverse set of societal and ecological values (e.g., water quality, biodiversity, recreation). The Midwest Conservation Blueprint is a living plan, updated annually based on improvements in underlying data, understanding of local conditions, and public input. Landscape-scale planning is not designed to replace local knowledge or supersede decision-making authorities. However, by synthesizing existing data that represent diverse socio-ecological values and planning at a broader scale, the Midwest Conservation Blueprint documents where there are shared priorities and opportunities for collaborative landscape conservation.

Midwest

Influence of roads, rivers, and mountains on natal dispersal of white-tailed deer

Natural and anthropogenic landscape features, such as rivers, mountain ranges, and roads can alter animal dispersal paths and movement patterns. Consequently landscape, through its effects on dispersal, may influence many ecological processes, including disease transmission, invasion dynamics, and gene flow. To investigate influences of landscape features on dispersal patterns of a large mammal, we captured and radiomarked 363 juvenile male white-tailed deer (Odocoileus virginianus), including 212 confirmed dispersers, in 2 topographically dissimilar study areas in Pennsylvania, USA. Dispersal azimuths were uniformly distributed in the western study area (WSA), where there was irregular, hilly topography. Mean dispersal azimuths paralleled ridge direction in the eastern study area, where long parallel ridges were aligned northeastsouthwest. Major roads in both areas and a large river in the WSA were semipermeable barriers to dispersal of juvenile males; dispersal paths were less likely to intersect these linear features. Dispersal movements were direct and brief, typically lasting <12 hours. For all dispersers, we found no evidence for preference or avoidance of establishing adult, postdispersal ranges in proximity to roads; however, deer that encountered roads near the terminus of their dispersal path were more likely to stop on the near side. Further, for deer that established postdispersal home ranges near major roads, these features influenced range placement such that locations were typically clustered on one side of the road. The influence of roads, rivers, and mountains on dispersal paths and postdispersal locations of white-tailed deer suggest that landscape-specific features should be considered in conservation and management of this and possibly other species of large mammals. ?? 2010 The Wildlife Society.

Journal of Wildlife Management

Development of ecological indicator guilds for land management

Agency land-use must be efficiently and cost-effectively monitored to assess conditions and trends in ecosystem processes and natural resources relevant to mission requirements and legal mandates. Ecological Indicators represent important land management tools for tracking ecological changes and preventing irreversible environmental damage in disturbed landscapes. The overall objective of the research was to develop both individual and integrated sets (i.e., statistically derived guilds) of Ecological Indicators to: quantify habitat conditions and trends, track and monitor ecological changes, provide early warning or threshold detection, and provide guidance for land managers. The derivation of Ecological Indicators was based on statistical criteria, ecosystem relevance, reliability and robustness, economy and ease of use for land managers, multi-scale performance, and stress response criteria. The basis for the development of statistically based Ecological Indicators was the identification of ecosystem metrics that analytically tracked a landscape disturbance gradient.

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