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Application of sediment characteristics and transport conditions to resource management in selected main-stem reaches of the Upper Colorado River, Colorado and Utah, 1965-2007

The Colorado River Basin provides habitat for 14 native fish, including 4 endangered species protected under the Federal Endangered Species Act of 1973. These endangered fish species once thrived in the Colorado River system, but water-resource development, including the building of numerous diversion dams and several large reservoirs, and the introduction of non-native fish, resulted in large reductions in the numbers and range of the four species through loss of habitat and stream function. Understanding how stream conditions and habitat change in response to alterations in streamflow is important for water administrators and wildlife managers and can be determined from an understanding of sediment transport. Characterization of the processes that are controlling sediment transport is an important first step in identifying flow regimes needed for restored channel morphology and the sustained recovery of endangered fishes within these river systems. The U.S. Geological Survey, in cooperation with the Upper Colorado River Endangered Fish Recovery Program, Bureau of Reclamation, U.S. Fish and Wildlife Service, Argonne National Laboratory, Western Area Power Administration, and Wyoming State Engineer’s Office, began a study in 2004 to characterize sediment transport at selected locations on the Colorado, Gunnison, and Green Rivers to begin addressing gaps in existing datasets and conceptual models of the river systems. This report identifies and characterizes the relation between streamflow (magnitude and timing) and sediment transport and presents the findings through discussions of (1) suspended-sediment transport, (2) incipient motion of streambed material, and (3) a case study of sediment-transport conditions for a reach of the Green River identified as a razorback sucker spawning habitat (See report for full abstract).

Colorado;Utah↗

Cooperative Fish and Wildlife Research Units program—2019 year in review

Acting Chief’s Message Dear Cooperators: Members of the Cooperative Research Units are pleased to provide you with the “2019 Year in Review” report for the Cooperative Fish and Wildlife Research Units (CRUs). You will first note that this report looks a little different than those published in the past few years, as we opted for a shorter, more concise format this year. Inside you will find brief descriptions of just a few highlighted activities of unit scientists, students, and cooperators in support of our joint mission. Because of the shorter format, we are not able to include activities from every unit or State, but rest assured that we continue to value the great work that all of you do across the country and around the world. In fiscal year 2019, the CRU program was very productive despite challenging conditions, including budget uncertainty, a month-long furlough, and hiring delays. John Organ, Chief of the CRU program, retired in January 2019. The process to replace John was delayed several times, but as I write this, the position has been announced on the Federal Government recruitment site. I am hopeful that by the time you read this, we will have a new permanent chief. Congress provided an increase of $1 million in our allocation for the express purpose of filling some of the vacancies in our scientific workforce. Since receiving that increase, the management team has been working to fill vacancies. The program is fortunate to have excellent research scientists, dedicated leadership, and an outstanding administrative staff. However, our accomplishments depend on the tremendous support from all of you. We look forward to a productive 2020. John D. Thompson

Circular↗

The effects of cortisoland actinomycin D injections on choloride cells and branchial N+---K+-ATPase in rainbow trout (Salmo gairdneri)

Injections of cortisol, actinomycin D, or combined administration of the hormone and the antiobiotic did not effect rainbow trout ( Salmo gairdneri ) branchial Na + K + -ATPase activity. Numbers of chloride cells also did not change following cortisol and actinomycin D treatment. These results are discussed in light of a similar report concerning Atlantic salmon ( Salmo salar ).

General and Comparative Endocrinology↗

The National Center of the U.S. Geological Survey

In August of 1973, the U. S. Geological Survey moved its first group of employees into the John Wesley Powell Federal Building of its newly constructed National Center at Reston, Virginia. The move signaled the fruition of more than a decade of planning and work to consolidate the agency's widespread activities into one location which could truly serve as a National Center. The Survey's leadership in the natural resources field has been materially strengthened through the availability of the Center's outstanding research and engineering facilities. Also the Center affords important professional and administrative advantages by bringing together the 2,200 Survey employees in the Washington, D.C, metropolitan area.

Virginia↗

Commerical Remote Sensing Data Contract

The U. S. Geological Survey's (USGS) Commercial Remote Sensing Data Contracts (CRSDCs) provide government agencies with access to a broad range of commercially available remotely sensed airborne and satellite data. These contracts were established to support The National Map partners, other Federal Civilian agency programs, and Department of Defense programs that require data for the United States and its territories. Experience shows that centralized procurement of remotely sensed data leads to considerable cost savings to the Federal government through volume discounts, reduction of redundant contract administrative costs, and avoidance of duplicate purchases. These contracts directly support the President's Commercial Remote Sensing Space Policy, signed in 2003, by providing a centralized mechanism for civil agencies to acquire commercial remote sensing products to support their mission needs in an efficient and coordinated way. CRSDC administration is provided by the USGS Mid-Continent Mapping Center in Rolla, Missouri.

Fact Sheet↗

Environmental Assessment for a Marine Geophysical Survey of Parts of the Arctic Ocean, August-September 2010

According to the United Nations Convention on the Law of the Sea (UNCLOS), individual nations? sovereign rights extend to 200 nautical miles (n.mi.) (370 km) offshore or to a maritime boundary in an area called the continental shelf. These rights include jurisdiction over all resources in the water column and on and beneath the seabed. Article 76 of UNCLOS also establishes the criteria to determine areas beyond the 200 n.mi. (370 km) limit that could be defined as ?extended continental shelf,? where a nation could extend its sovereign rights over the seafloor and sub-seafloor (As used in UNCLOS, ?continental shelf? refers to a legally defined region of the sea floor rather than a morphological shallow-water area adjacent to continents commonly used by geologists and hydrographers.). This jurisdiction provided in Article 76 includes resources on and below the seafloor but not in the water column. The United States has been acquiring data to determine the outer limits of its extended continental shelf in the Arctic and has a vested interest in declaring and receiving international recognition of the reach of its extended continental shelf. The U.S. collaborated with Canada in 2008 and 2009 on extended continental shelf studies in the Arctic Ocean. The U.S. Coast Guard (USCG) Cutter Healy worked with the Canadian Coast Guard ship Louis S. St. Laurent to map the continental shelf beyond 200 n.mi. (370 km) in the Arctic. Each icebreaking vessel contributed different capabilities in order to collect data needed by both nations more efficiently in order to save money, avoid redundancy, and foster cooperation. Generally, the Healy collects bathymetric (sea-floor topography) data and the Louis S. St. Laurent collects seismic reflection profile data. The vessels work in concert when ice conditions are heavy, with one vessel breaking ice for the ship collecting data. The Canadian Environmental Assessments for these projects are available on line at http://www.ceaa.gc.ca/052/details-eng.cfm?pid=38185 (2008) and http://www.ceaa.gc.ca/052/details-eng.cfm?pid=46518 (2009). The U.S. Geological Survey (USGS) and Geological Survey of Canada (GSC) are undertaking a similar partnership again for 2010 in a limited area of U.S. waters during the period between ~10 and 16 August. The survey vessels will then proceed to international or Canadian waters where surveying will proceed until ~3 September, when the two icebreakers will separate to conduct independent work. The survey area of the joint work will be bounded approximately by 145? to 158? W longitude and 71? to 84? N latitude in water depths ranging from ~2,000 to 4,000 m (fig. 1). Ice conditions are expected to range from open water to 10/10 ice cover. The Louis S. St. Laurent will join accompanying vessel Healy in or near the survey area around 10 August to begin the joint survey work. As its energy source, the seismic system aboard Louis S. St. Laurent will employ a 3-airgun array consisting of three Sercel G-airguns. Two guns will have a discharge volume of 500 in3 and the third a discharge volume of 150 in3 for a total array discharge volume of 1,150 in3. The seismic survey will take place in water depths 2,000?4,000 m. This airgun array is identical to the system used in the 2008 and 2009 field programs by the Geological Survey of Canada. The USGS requested that the National Marine Fisheries Service (NMFS) issue an Incidental Harassment Authorization (IHA) to authorize the incidental, that is, not intentional, harassment of small numbers of cetaceans and seals should this occur during the seismic survey in U.S. waters. USGS is also consulting with the U.S. Fish and Wildlife Service (USFWS) regarding concerns about disturbance to walruses and polar bears. Through informal consultation with the Office of Protected Resources with the National Oceanic and Atmospheric Administration (NOAA), USGS proposes that no ESA-listed marine species?bowhead, fin, humpback or sperm whale?w

Open-File Report↗

Environmental overview and hydrogeologic conditions at Aniak, Alaska

The remote Native village of Aniak, on the flood plain of the Kuskokwim River in southwestern Alaska, has long cold winters and short summers that affect both the hydrology of the area and the lifestyle of the residents. Aniak obtains its drinking water from a shallow aquifer in the thick alluvium underlying the village. Surface spills and disposal of hazardous materials combined with annual flooding of the Kuskokwim River may affect the quality of the ground water. Alternative drinking water sources are available but at significantly greater cost than existing supplies. The Federal Aviation Administration (FAA) owns or operates airport support facilities in Aniak. The subsistence lifestyle of the villagers and the quality of the current environment must be taken into consideration when the FAA evaluates options for remediation of environmental contamination at these facilities. This report describes the ground- and surface-water hydrology, geology, climate, vegetation, soils, and flood potential of the areas surrounding the FAA sites.

Open-File Report↗

Geologic features of dam sites in the Nehalem, Rogue, and Willamette River basins, Oregon, 1935-37

The present report comprises brief descriptions of geologic features at 19 potential dam sites in the Nehalem, Rogue, and Willamette River basins in western Oregon. The topography of these site and of the corresponding reservoir site was mapped in 1934-36 under an allocation of funds, by the Public Works Administration for river-utilization surveys by the Conservation Branch of the United States Geological Survey. The field program in Oregon has been under the immediate charge of R. O. Helland. The 19 dam sites are distributed as follows: three on the Nehalem River, on the west or Pacific slope of the Oregon Coast range; four on Little Butte Creek and two on Evans Creek, tributaries of the Rogue River in the eastern part of the Klamath Mountains; four on the South and Middle Santiam Rivers, tributaries of the Willamette River from the west slope of the Cascade mountains; and six on tributaries of the Willamette River from the east slope of the Coast Range. Except in the Evans Creek basin, all the rocks in the districts that were studied are of comparatively late geological age. They include volcanic rocks, crystalline rocks of several types, marine and nonmarine sedimentary rocks, and recent stream deposits. The study of geologic features has sought to estimate the bearing power and water-tightness of the rocks at each dam site, also to place rather broad limits on the type of dam for which the respective sites seem best suited. It was not considered necessary to study the corresponding reservoir sites in detail for excessive leakage appears to be unlikely. Except at three of the four site in the Santiam River basin, no test pits have been dug nor exploratory holes drilled, so that geologic features have been interpreted wholly from natural outcrops and from highway and railroad cuts. Because these outcrops and cuts are few, many problems related to the construction and maintenance of dams can not be answered at the this time and all critical features of the sites should be thoroughly explored by test pits and drilled holes before any dam is designed. This applied especially to sites in the Nehalem and Willamette River basins where commonly the cover of timber and brush is dense and the rocks are rather deeply weathered. On the Middle Santiam and South Santiam Rivers, the Cascadia, Greenpeter, and Sweet Home sits have been studies intensively by the United States Engineer Department, whose work included exploration by diamond-drill holes and test pits. Their conclusions as to geologic features are given in a report by McKitrick and have been reviewed by the writer. Data from this source have been used freely in the discussion of the respective sites in this report. The probability of destructive earthquakes in the region appears to be small but is not negligible. Prudence suggests that any high dam should embody features to assure stability against moderately strong earth motions.

Oregon↗

The Louisiana Amphibian Monitoring Program from 1997 to 2017: Results, analyses, and lessons learned

To determine trends in either frog distribution or abundance in the State of Louisiana, we reviewed and analyzed frog call data from the Louisiana Amphibian Monitoring Program (LAMP). The data were collected between 1997 and 2017 using North American Amphibian Monitoring Program protocols. Louisiana was divided into three survey regions for administration and analysis: the Florida Parishes, and 2 areas west of the Florida parishes called North and South. Fifty-four routes were surveyed with over 12,792 stops and 1,066 hours of observation. Observers heard 26 species of the 31 species reported to be in Louisiana. Three of the species not heard were natives with ranges that did not overlap with survey routes. The other two species were introduced species, the Rio Grande Chirping Frog ( Eleutherodactylus cystignathoides) and the Cuban Treefrog ( Osteopilus septentrionalis) . Both seem to be limited to urban areas with little to no route coverage. The 15 most commonly occurring species were examined in detail using the percentage of stops at which they observed along a given survey and their call indices. Most species exhibited a multimodal, concave, or convex pattern of abundance over a 15-year period. Among LAMP survey regions, none of the species had synchronous population trends. Only one group of species, winter callers, regularly co-occur. Based on the species lists, the North region could be seen as a subset of the South. However, based on relative abundance, the North was more similar to Florida parishes for both the winter and summer survey runs. Our analyses demonstrate that long-term monitoring (10 years or more) may be necessary to determine population and occupancy trends, and that frog species may have different local demographic patterns across large geographic areas.

Louisiana↗

Twenty-Sixth Annual Report of the Director of the United States Geological Survey, 1904-1905

Introduction Remarks on the work of the year Branches of work The United States Geological Survey was created in 1879 for the purpose—as its name implies—of examining and reporting on the geologic structure and mineral resources and products of the national domain. To the adequate description of geologic formations and structure cartography is essential, and Congress early recognized this fact by making appropriations for the preparation of a geologic map of the United States. The topographic base map, in order to show with sufficient precision the relations of the geologic formations and the intricacies of the structure, must have a rather large scale and present considerable detail. No such map of this country existed in 1879, and its preparation was immediately begun. The waters of the country are of vast importance, and in a broad sense may be regarded as one of its greatest mineral resources. Hence, in the evolution of the work of the Survey, and especially in view of the great importance of the subject to the irrigation interests, Congress early began making appropriations for ascertaining the amount and quality of the surface and underground waters and when, in 1902, the service for the reclamation of arid lands was organized, that work naturally was placed in the hands of the Secretary of the Interior and by him intrusted to the Director of the Survey. The three great branches of work carried on by the Geological Survey are, therefore, the geologic, the topographic, and the hydrographic, and with these, more especially the latter, is conjoined the Reclamation Service ; publication and administration constitute necessary auxiliary branches. Along these great lines the work of the Survey has progressed without essential variation for many years. The changes made have been due to normal expansion rather than to radical departure in object or plan. State cooperation During the last fiscal year, State cooperation, as explained in previous reports, continued. Arrangements for cooperation in geologic work were made with five States, the total amount contributed by them being about \$8,000, and arrangements for cooperative topographic surveys were made with eleven States, the amount available for such surveys being thus increased by more than \$100,000. Reclamation service The work of the Reclamation Service during the last fiscal year was advanced as rapidly as was thought consistent with thoroughness and accuracy. Actual construction is now in progress on eight projects, as follows : Salt River, Arizona; Truckee-Carson, Nevada; Hondo, New Mexico ; Uncompahgre Valley, Colorado; Minidoka, Idaho; Belle Fourche, South Dakota ; North Platte, Wyoming and Nebraska ; and Shoshone, Wyoming. Proposals were received for work on the Laguna dam, Yuma project, California and Arizona; Huntley project, Montana, and the Fort Buford project, North Dakota and Montana. In several other States operations are at a point where advertisements for bids only await the removal of certain legal obstacles, the settlement of international difficulties, or the termination of delays on the part of local organizations or individuals. The organization of the body of men constituting the personnel of the Reclamation Service, whose field of operations covers so large a territory, though necessarily difficult, has been satisfactorily accomplished, and precedents have been established along approved lines. The general allotment of funds has been made with a view to the greatest benefit to the greatest number, and from the broad standpoint of the welfare of the country as a whole. One of the important features in the evolution of the irrigation work is the development of power, which the numerous dams and, drops in canals make possible. Plans were made to transmit the power being developed in many sections of the arid regions, by means of electricity, to points more or less distant, there to be used for raising underground waters, pumping waters lying above the line of gravity canals, or for various other purposes, and attention was also given to the character of the soils and of the water to be used upon them, the materials used in the construction of the works, and numerous other details incident to reclamation by irrigation. Coal-testing plant Under two special appropriations of \$30,000 each, carried by the urgent deficiency bill approved February 18, 1904, and the general deficiency bill approved April 27, 1904, the Director of the Geological Survey was authorized to construct and operate at the Louisiana Purchase Exposition a plant for testing the coals and lignites of the United States, in order to determine their fuel values and the most economic method of their utilization for different purposes, it being provided that all testing machinery and all coals and lignites to be tested 'should be contributed free of charge to the Government. For carrying out the provisions of these acts the Director appointed a committee, consisting of Edward W. Parker, Joseph A. Holmes, and Marius R. Campbell, to direct the construction and operation of the plant. This committee received the heartiest cooperation from the manufacturers of such equipment as was needed for the installation of the plant, from the railroad companies in freight concessions and transportation for the experts and their assistants, and from the coal operators in the furnishing of coal in carload lots for testing purposes. Although the utmost expedition was used in the construction of the plant, it was not until the first of September that the testing work actually began. Between the first of September and the close of the exposition 65 carload samples of coal for testing purposes were received, and the results of the investigation were published in a preliminary report issued as Geological Survey Bulletin No. 261. The coals tested were received from 17 States and Territories, and much valuable information regarding the best uses to which the different coals may be put was obtained. One of the most important facts developed during this investigation is the possibility of utilizing the vast lignite resources of the West in the manufacture of producer gas, it having been shown that a higher grade of this gas can be obtained from lignite than from ordinary bituminous and anthracite coal. The investigation also showed that the slack or fine coal produced at the dry, noncoking bituminous coal mines of the middle West, large quantities of which are now being wasted, can be profitably utilized by briquetting.

Annual Report↗

Hood River PIT-tag interrogation system efficiency study. Annual report of U.S. Geological Survey activities: November 2010-October 2011

Introduction During summer 2010, an agreement was made between the US Geological SurveyColumbia River Research Laboratory (USGS-CRRL) and the Confederated Tribes of the Warm Springs (CTWS) to operate an experimental Passive Integrated Transponder (PIT)-tag interrogation system (PTIS) near the mouth of the Hood River for a year and provide fishdetection efficiency estimates (Bonneville Power Administration (BPA) project number 1988- 053-03, contract number 50150). A previous agreement between Oregon Department of Fish and Wildlife (ODFW) and USGS-CRRL had funded materials acquisition, construction, and installation of the PTIS (BPA project number 1988-053-04, contract number 48684). The primary purpose of the project was to test the efficacy of a PTIS in the lower Hood River for providing data on returning adult salmonids to the Hood River as part of the Hood River Production Monitor and Evaluation project (HRPME). Because PIT tags are small, relatively inexpensive, carry no internal battery, and last through the lifespan of most fishes, they are commonly used in long term fish monitoring projects. They have been extensively used in the Columbia River basin to monitor salmonid behavior and survival through life stages and migration routes in the mainstem Columbia River (Skalski et al. 1998; Zabel and Achord 2004). Increasingly, PIT-tag detection equipment has been deployed in streams to investigate salmonid behavior (Zydlewski et al. 2001, 2006; Riley et al. 2003; Bond et al. 2007). Most of the detection systems deployed and evaluated to date have been in much smaller streams than the mainstem of the Hood River (Zydlewski et al. 2001, 2006; Bond et al. 2007; Horton et al. 2007; Connolly et al. 2008), but researchers are attempting to expand detection abilities to larger streams and rivers. Large streams and rivers can prove extremely challenging to monitor. Some systems have showed promise for contributing valuable detection data, others have proved less successful. A detection system in the Klamath River (Beeman et al. 2012), a site similar in size to the Hood River, suffered problems from cables being dislodged and high water that resulted in a detection efficiency estimate for juvenile coho salmon of less than 0.05. An additional USGS-CRRL task, under contract number 50150, was to build three antennas for use with Destron-Fearing 2001F-ISO PIT tag readers. These antennas would be 5 used at the East Fork Hood River Acclimation site. They would be placed in the outflow channel to inform managers about the number of PIT tagged steelhead smolts released to the Hood River after a period of acclimation when some mortality and predation might occur.

Oregon↗

Regulations of the United States Geological Survey

The following regulation have been prepared for the guidance of officers and employees of the United States Geological Survey. They are derived in large part from statute law, from decisions of the accounting officers of the Treasury Department, and from official circulars of the Department of the Interior. It is believed that close adherence to these directions will prove helpful to all members of the Geological Survey. This manual of "Regulations," approved by the Secretary, is intended to cover the more important matters relating to the general administrative work of the Survey. A separate series of "Instructions" is issued by the Director for the guidance of the various field assistants and party chiefs.

Report↗

Technical-information products for a National Volcano Early Warning System

Technical outreach — distinct from general-interest and K-12 educational outreach — for volcanic hazards is aimed at providing usable scientific information about potential or ongoing volcanic activity to public officials, businesses, and individuals in support of their response, preparedness, and mitigation efforts. Within the context of a National Volcano Early Warning System (NVEWS) (Ewert et al., 2005), technical outreach is a critical process, transferring the benefits of enhanced monitoring and hazards research to key constituents who have to initiate actions or make policy decisions to lessen the hazardous impact of volcanic activity. This report discusses recommendations of the Technical-Information Products Working Group convened in 2006 as part of the NVEWS planning process. The basic charge to the Working Group was to identify a web-based, volcanological "product line" for NVEWS to meet the specific hazard-information needs of technical users. Members of the Working Group were: Marianne Guffanti (Chair), USGS, Reston VA Steve Brantley, USGS, Hawaiian Volcano Observatory HI Peter Cervelli, USGS, Alaska Volcano Observatory, Anchorage AK Chris Nye, Division of Geological and Geophysical Surveys and Alaska Volcano Observatory, Fairbanks AK George Serafino, National Oceanic and Atmospheric Administration, Camp Springs MD Lee Siebert, Smithsonian Institution, Washington DC Dina Venezky, USGS, Volcano Hazards Team, Menlo Park CA Lisa Wald, USGS, Earthquake Hazards Program, Golden CO

Open-File Report↗

Lidar vegetation mapping in national parks: Gulf Coast Network

Airborne lidar (Light Detection and Ranging) is an active remote sensing technique used to collect accurate elevation data over large areas. Lidar provides an extremely high level of regional topographic detail, which makes this technology an essential component of U.S. Geological Survey (USGS) science strategy. The USGS Coastal and Marine Geology Program (CMGP) has collaborated with the National Aeronautics and Space Administration (NASA) and the National Park Service (NPS) to acquire dense topographic lidar data in a variety of coastal environments.

Louisiana↗

The U.S. Geological Survey Astrogeology Science Center

In 1960, Eugene Shoemaker and a small team of other scientists founded the field of astrogeology to develop tools and methods for astronauts studying the geology of the Moon and other planetary bodies. Subsequently, in 1962, the U.S. Geological Survey Branch of Astrogeology was established in Menlo Park, California. In 1963, the Branch moved to Flagstaff, Arizona, to be closer to the young lava flows of the San Francisco Volcanic Field and Meteor Crater, the best preserved impact crater in the world. These geologic features of northern Arizona were considered good analogs for the Moon and other planetary bodies and valuable for geologic studies and astronaut field training. From its Flagstaff campus, the USGS has supported the National Aeronautics and Space Administration (NASA) space program with scientific and cartographic expertise for more than 50 years.

Fact Sheet↗

Monitoring storm tide from Hurricane Michael along the northwest coast of Florida, October 2018

Hurricane Michael made landfall near Mexico Beach and Tyndall Air Force Base in the Florida Panhandle, with maximum sustained winds over 160 miles per hour, on October 10, 2018. The maximum recorded storm tide was 15.55 feet above the North American Vertical Datum of 1988 (NAVD 88). The elevation of the maximum high-water mark, found in Port St. Joe, Florida, exceeded 20 feet above NAVD 88. The storm tide and winds destroyed much of the tourist town of Mexico Beach and caused extensive damage to the surrounding communities, including Tyndall Air Force Base, Panama City Beach, Port St. Joe, and Cape San Blas, Fla. The U.S. Geological Survey (USGS), in cooperation with Federal Emergency Management Agency and Florida Division of Emergency Management, deployed a temporary monitoring network of water-level and barometric pressure sensors at 34 sites along the northwest coast of Florida to record the timing, areal extent, and magnitude of hurricane storm tide generated by Hurricane Michael. A total of 522 high-water marks were recovered and surveyed from 331 sites from Seaside, Fla. to Cedar Key, Fla. The USGS, in cooperation with Federal Emergency Management Agency and Florida Division of Emergency Management, displays real-time water-level data from long-term USGS streamflow stations, rapid deployment gages and National Oceanic and Atmospheric Administration tide-gage stations, updated hourly (or, in some cases, more frequently), through satellite telemetry, on the USGS Flood Event Viewer (https://stn.wim.usgs.gov/FEV/#Michael2018).

Florida↗

Citing aquatic monitoring data sets: Best practice recommendations for authoritative data citation

The use of data generated from long term monitoring efforts necessitates accurate authoritative source citations of those data to ensure credit for data collected, and accountability for the data quality to enable repeated retrieval of a given data set. Data sets used in published reports and articles are increasingly being considered objects that are required to be published and cited. Aggregating data into open access databases is becoming common and is the focus of the Coordinated Assessment for Salmon and Steelhead project (CA; https://www.pnamp.org/project/coordinated-assessments-for-salmon-and-steelhead; http://www.streamnet.org/data/coordinated-assessments/ ) and National Marine Fisheries Service, National Oceanic and Atmospheric Administration Salmon Population Summary (SPS; https://www.webapps.nwfsc.noaa.gov/apex/f?p=261:home:0 ) among others. Guidelines are needed for citing these long-term dynamic data sets that have many contributors. We explore best practices and provide recommendations for including robust metadata attributes within data sets to enable data publication and citation using the CA and SPS data repositories as case studies. F rom reviewing the current citations possible from the CA and the SPS we recommend at minimum that natural resource monitoring databases contain: metadata to identify organizations that generated the data; contact persons for each organization that contributes data to an aggregated data set; and that metadata be incorporated into databases to enable auto-generated citations that recognize all contributing organizations with time-stamped versions of the data delivered. Beyond those minimums, additional best practice recommendations include this suite of metadata elements that identify a given data set upon citation or publication: author(s); publication date; description of data; file format(s) of data - e.g. tiles, shapefile sets, images, text files; dates data were collected; locations where data were collected; producers/contributors to the data set version cited; date data set was downloaded; original data repository from which the data were obtained; version identifier to note significant change to a data set; and a persistent identifier that can be used to locate that version of the data.

Report↗

Data Model and Relational Database Design for Highway Runoff Water-Quality Metadata

A National highway and urban runoff waterquality metadatabase was developed by the U.S. Geological Survey in cooperation with the Federal Highway Administration as part of the National Highway Runoff Water-Quality Data and Methodology Synthesis (NDAMS). The database was designed to catalog available literature and to document results of the synthesis in a format that would facilitate current and future research on highway and urban runoff. This report documents the design and implementation of the NDAMS relational database, which was designed to provide a catalog of available information and the results of an assessment of the available data. All the citations and the metadata collected during the review process are presented in a stratified metadatabase that contains citations for relevant publications, abstracts (or previa), and reportreview metadata for a sample of selected reports that document results of runoff quality investigations. The database is referred to as a metadatabase because it contains information about available data sets rather than a record of the original data. The database contains the metadata needed to evaluate and characterize how valid, current, complete, comparable, and technically defensible published and available information may be when evaluated for application to the different dataquality objectives as defined by decision makers. This database is a relational database, in that all information is ultimately linked to a given citation in the catalog of available reports. The main database file contains 86 tables consisting of 29 data tables, 11 association tables, and 46 domain tables. The data tables all link to a particular citation, and each data table is focused on one aspect of the information collected in the literature search and the evaluation of available information. This database is implemented in the Microsoft (MS) Access database software because it is widely used within and outside of government and is familiar to many existing and potential customers. The stratified metadatabase design for the NDAMS program is presented in the MS Access file DBDESIGN.mdb and documented with a data dictionary in the NDAMS_DD.mdb file recorded on the CD-ROM. The data dictionary file includes complete documentation of the table names, table descriptions, and information about each of the 419 fields in the database.

Open-File Report↗