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USGS2008

The search for Braddock’s Caldera— Guidebook for Colorado Scientific Society Fall 2008 field trip, Never Summer Mountains, Colorado

The report contains the illustrated guidebook that was used for the fall field trip of the Colorado Scientific Society on September 6-7, 2008. It summarizes new information about the Tertiary geologic history of the northern Front Range and the Never Summer Mountains, particularly the late Oligocene volcanic and intrusive rocks designated the Braddock Peak complex. Minor modifications were made in response to technical reviews by D.J. Lidke and C.A. Ruleman (U.S. Geological Survey) regarding clarity and consistency, and text editing by M.A. Kidd. However, the text remains essentially similar to the guidebook that was circulated to the participants on the Colorado Scientific Society 2008 field trip. Several notes were added following the trip (as indicated) to address developments since the guidebook was written.

Colorado↗

USGS2019

Preface: Marine gas hydrate reservoir systems along the eastern continental margin of India: Results of the National Gas Hydrate Program Expedition 02

The 2015 India National Gas Hydrate Program (NGHP) Expedition 02 was conducted to obtain new information on the occurrence of gas hydrate systems and to advance the understanding of geologic controls on the formation of gas hydrate accumulations in the offshore of India. The ultimate goal of the NGHP effort is to assess the energy resource potential of marine gas hydrates in India. The Guest Editors for this special thematic issue of the Journal of Marine and Petroleum Geology (JMPG) have worked with more than 100 scientists and engineers to prepare the 45 individual reports included in this special issue to address the operational and technical contributions of the NGHP-02 Expedition. This thematic issue on natural gas hydrates in the offshore of India is built on the foundation of five previous JMPG thematic issues that focused on the scientific results of other marine gas hydrate expeditions. These foundational contributions include: (1) the “Scientific Results of the 2005 USDOE-Chevron JIP Drilling for Methane Hydrates Objectives in the Gulf of Mexico” (Volume 25, Issue 9, November 2008), (2) the “Resource and Hazard Implications of Gas Hydrates in the Northern Gulf of Mexico: Results of the 2009 Joint Industry Project Leg II Drilling Expedition” (Volume 34, Issue 1, June 2012), (3) the “Scientific Results of the Second Gas Hydrate Drilling Expedition in the Ulleung Basin (UBGH2), East Sea of Korea” (Volume 47, November 2013), (4) “Geologic Implications of Gas Hydrates in the Offshore of India: Results of the National Gas Hydrate Program Expedition 01” (Volume 58, Part A, December 2014), and (5) “Gas Hydrate Drilling in Eastern Nankai” (Volume 66, Part 2, September 2015). The NGHP-02 Expedition was conducted from 03-March- 2015 to 28-July- 2015 off the eastern coast of India. The first two months of the expedition were dedicated to establishing 25 new research sites that featured the drilling of a dedicated downhole logging hole at each site. The next three months of the NGHP-02 Expedition were dedicated to sediment coring and other downhole measurement operations at 10 of the sites established during the expedition’s first phase. The results of downhole logging, coring and formation pressure testing operations during NGHP-02 have confirmed the presence of large, highly concentrated gas hydrate accumulations in coarse-grained, sand-rich depositional systems throughout large portions of the Krishna-Godavari Basin. Post expedition research and reporting efforts included collaborative analysis of the unprecedented number of shipboard acquired data sets and core samples obtained during NGHP-02. The presentation of the scientific results of the NGHP-02 Expedition has culminated in the publication of the NGHP Expedition 02 Scientific Results Volume, which is represented by this Special Issue of the Journal of Marine and Petroleum Geology. This Special Issue features a series of four reports that summarize the operational and scientific results of NGHP-02 Expedition that are presented in the 41 technical reports included this Special Issue. The first summary report, “India National Gas Hydrate Program Expedition 02: Operational and Technical Summary,” focuses on reviewing the tools and operational procedures for the NGHP-02 Expedition that led to the acquisition of an unprecedented amount of high-quality downhole logging and core data from numerous pore-filling, fracture-filling, and sediment-displacement type gas hydrate occurrences. The summary report titled “India National Gas Hydrate Program Expedition 02 Summary of Scientific Results: Gas Hydrate Systems Along the Eastern Continental Margin of India” documents gas hydrate occurrences discovered during the NGHP-02 Expedition and examines geologic controls on the gas hydrate systems along the Eastern Continental Margin of India.

Journal of Marine and Petroleum Geology↗

USGS2022

Contaminants of emerging concern in the Great Lakes: Science to inform management practices for protecting the health and integrity of wildlife populations from adverse effects: GLRI action plan I, focus area 1, goal 5

Executive Summary: Under Action Plan I (2010-2014) of the Great Lakes Restoration Initiative (GLRI), Federal and Academic partners began an investigation of the presence and distribution of contaminants of emerging concern (CECs) in the Great Lakes and potential impacts on fish and wildlife. The term CECs is applied to a broad range of chemicals that are currently in use but for which we currently lack good understanding of whether fish, wildlife, or humans are being exposed and/or whether negative health or environmental effects are expected if exposure occurs. Pharmaceuticals, personal care products, flame retardants, many current use pesticides, and poly- and perfluorinated chemicals are some well-known groups of CECs, but there is no definitive or comprehensive list that can be used to support the management of CECs to reduce impacts on the Great Lakes ecosystem. Four overarching goals were identified for this collaborative investigation: 1. Evaluate the sources, occurrence, and distribution of CECs across the Great Lakes Basin. 2. Examine associations between the distribution of CECs and land-use patterns. 3. Review both scientific literature and field-generated data to determine the potential for CECs to cause adverse effects on Great Lakes fish and wildlife populations. 4. Develop efficient strategies to survey and/or monitor for threats that CECs may pose in order to take effective management actions before those threats evolve into large scale impacts on Great Lakes ecosystems or the services they provide. Achievement of these goals ensures progress towards Focus Area 1: Toxic Substances and Areas of Concern from GLRI Action Plan I, Goal 5: “ The health and integrity of wildlife populations and habitat are protected from adverse chemical and biological effects associated with the presence of toxic substances in the Great Lakes Basin ”. This large-scale research effort was comprised of individual and collaborative projects from multiple federal agencies and academic institutions, involving over 85 investigators, and overseen by the U.S. Environmental Protection Agency (EPA) Region 5, Great Lakes National Program Office. Partners include the United States Geological Survey, the National Oceanic and Atmospheric Administration, U.S. Fish and Wildlife Service, Saint Cloud State University, the U.S. EPA Office of Research and Development, and the U.S. Army Corps of Engineers. Key findings: 1. Contaminants of emerging concern were found throughout the monitored Great Lakes tributaries, but types and concentrations vary in association with regional land use. CECs were detected in nearly all samples collected. The type and concentration of the specific contaminants detected varied considerably among field sites and in association with land use type, such as urban, agricultural, wetland, 2 or forest. Contaminants were detected in the water column, sediment, and tissues of all species surveyed in the current work (mussels, aquatic insects, fish, and insect-eating birds). 2. There were over 20 contaminants for which CEC concentrations approached or exceeded those reported to cause toxicity in laboratory experiments. This was based on detection in water, sediments and or biota at one or more field sites. These contaminants represent compounds that warrant further investigation and monitoring with respect to potential impacts in certain areas of the Great Lakes basin. Based on the present investigation, compounds of greatest concern include: polycyclic aromatic hydrocarbons, associated with oil-based products and combustion of organic matter; atrazine, an herbicide; dichlorvos, an insecticide; and ibuprofen and venlafaxine, both pharmaceuticals. 3. Results suggest that mixtures of CECs presently found in most Great Lakes tributary locations surveyed may elicit subtle biological effects, but likely are not, alone, causing obvious detriment to current communities of fish and wildlife. CECs detected in the Great Lakes were associated with subtle biological effects like changes in gene expression, altered circulating glucose, etc. in both wild-caught and laboratory-reared organisms. These effects were generally not indicative of reproductive failure or mortality. However, the effects may have more serious implications when combined with other sources of stress like habitat degradation, changing climate conditions, and competition with invasive species. Due to limited historical data, it is unknown whether severe CEC-related impacts have already affected aquatic communities in waterbodies that have received long-term inputs of these contaminants. Likewise, under Action Plan I, biological effects were not necessarily evaluated at the sites where CEC concentrations exceeding laboratory toxicity thresholds were detected. As a result, strategic, ongoing surveillance and monitoring of CECs is warranted. This collaborative investigation resulted in new tools, approaches, and data that can be used to inform and support the management of CECs to reduce their impacts on Great Lakes natural resources. The following products of this research effort are available through https://communities.geoplatform.gov/glri/ or by contacting the investigators (see technical chapters found in Appendices A-F): 1. Database of CEC occurrence and concentrations in US tributary streams. The database includes CEC detections in water, sediment, and fish and wildlife tissues, and represents the most comprehensive survey of CECs in the Great Lakes Region. 2. Synopses of results and key findings. Integrated summaries of results, conclusions, and management implications of the CEC research are available through reports, topical fact sheets, and presentations. 3. Technical publications: This collaborative research effort has resulted in over 50 peer-reviewed publications, agency reports, and data releases that can be of use to resource managers, the scientific community, and members of the public. 4. Innovative tools. Innovative monitoring devices, sampling equipment, conceptual frameworks, and software applications were developed over the course of this 3 research. These tools are transferable to stakeholders via internet accessibility or via specifications, instructions, and demonstration detailed in technical publications. Hypotheses to guide CECs research under Action Plan II. Findings from 2010-2014 were used to guide further research in 2015-2018 for basin-wide surveillance of CECs and for sites warranting further study of potential biological impacts of CECs. Additional surveillance included both evaluation of additional classes of contaminants and expanded lists for chemical classes shown to be of greatest concern. Mixtures of some of the most frequently detected contaminants were also tested in laboratory studies to understand whether long term exposures to multiple contaminants may result in effects not evident from uncontrolled, short-term field experiments.

Great Lakes↗

USGS2025

Marsh sediment in translation: A review of sediment transport across a natural tidal salt marsh in northern San Francisco Bay

Deposition of inorganic sediment is essential for the sustainability of tidal salt marshes. Understanding variability in sediment sources and the processes of sediment delivery to salt marshes are high priorities for decision-makers responsible for managing sediment and conserving and restoring marshes. Research on sediment transport to marshes is published in technical journals, but these scientific findings must be translated and communicated to inform critical decisions related to managing sediment in estuaries. We convened a diverse group of collaborators—including natural-resource managers, regulators, scientists, and restoration planners and practitioners—to review and interpret the results of previously published field investigations on and around the salt marsh at China Camp State Park in Marin County, California. We discussed and translated key results of those studies using new graphics and more accessible language. Here, we present a general introduction to the topic of sediment delivery to salt marshes, background descriptions of the China Camp marsh and the physical processes that we characterized there, key scientific conclusions, and proposed management implications. Key conclusions include (1) bay shallows are an important but variable source of marsh sediment, (2) flood tides and waves move sediment across the bay–marsh edge, (3) tidal creeks may not always import sediment to the marsh platform, and (4) protective effects of marsh vegetation depend on species and season. China Camp marsh is one of the last remaining pre-colonial salt marshes in the San Francisco Estuary and is unique in being relatively unmodified by humans and in retaining an unimpeded transition into natural uplands. Additional studies in a variety of marshes with different attributes and sediment regimes will broaden understanding of how best to conserve, manage, and restore tidal marshes that provide numerous ecosystem services to for humans and wildlife.

California↗

USGS1958

Suggestions to authors of the reports of the United States Geological Survey

Knowledge acquired by the Geological Survey through programs of research and investigations has no value to the public if it remains in office files or in the minds of the scientists and engineers who did the work. The full discharge of the Survey's responsibilities is attained only by making its acquired knowledge available promptly and effectively to all people who will find it of interest and use. And, to insure effectiveness, reports must be not only accurate but so clearly and simply written that they are easy to read and understand. Efforts by the Geological Survey to attain high quality in reports are necessarily group efforts. The largest contribution is made by the author, who has assembled facts, has worked out ideas to explain them, and has a direct personal interest in making the facts and ideas clearly and effectively known. The Geological Survey encourages that interest, recognizing that it is an essential ingredient of the high morale of the members of the Survey. Authors should keep in mind, however, that the Survey has a proprietary interest in all their manuscript reports and as proprietor may dispose of the reports, or require that they be changed before publication, as it sees fit. The Survey generally exercises its proprietary interest only to the extent of seeing that a report is scientifically and technically sound, will reach the proper audience, and will reflect credit on both the Survey and the author. To these ends, each report is reviewed by the author's fellow workers, supervisors, and staff officials, who bring to bear upon it their specialized knowledge, skill, judgement to assure a sound product. In its final form each Survey report is that product of team effort in which many persons do their share -- even though most of them remain anonymous. There is no easy way to prepare reports of high quality, any more than there is an easy means of carrying out research to sure and outstanding conclusions. Each task calls for intensive thinking and for preserving work. The author bears the primary responsibility and correspondingly faces the most difficult task. To aid him is the chief purpose of this volume. The subject matter of this volume is arranged under several principal headings. First, a summary is given of the Survey's publications: the historical basis for them, statistics as to what has been issued in the periods 1879-1957, and a list and description of the several series of reports and maps in which material is being published. Next are outlined successive steps that the author will normally take from the start of a project to his final proofreading of the text and illustrations. Under the third broad heading is brought together much detailed information about the form and content of reports. The fourth part of this volume is devoted to advice on expression -- what to seek and what to avoid. A fifth major part of this volume bears on the most common questions of typographic style that affect Survey publications. The final sections of the volume give instructions for typing manuscript copy and correcting the galley and page proofs; also they include a few useful tables and a discussion of the purpose and content of press releases.

Report↗

USGS2023

Achieving water quality goals in the Chesapeake Bay: A comprehensive evaluation of system response

A Comprehensive Evaluation of System Response Achieving Water Quality Goals in the Chesapeake Bay: A Comprehensive Evaluation of System Response (CESR) includes an evaluation of why progress toward meeting the TMDL and water quality standards has been slower than expected and offers options for how progress can be accelerated. This report is a summation of a three year investigation into the 40 year effort to reduce nutrient loads to Chesapeake Bay. History The effort began as a STAC independent initiative in March 2019, after Kurt Stephenson, Zach Easton, and Brian Benham proposed the idea of a report that would identify gaps and uncertainties in system response—physical, chemical, biological, and socioeconomic—that impact efforts designed to attain water quality standards in Chesapeake Bay. As STAC Chair at the time, Benham facilitated the development of a collaborative process that would engage the entire committee. As a first step in approaching the long causal chain that links management actions to their eventual impact on water quality and living resources, workgroups were formed around the subsystems of this chain: nutrient and sediment reductions (watershed), water quality response to nutrient and sediment reductions (estuary) and living resource response to water quality (living resources). Each of these workgroups generated an independent document with a self-determined scope (i.e., workgroups were afforded flexibility to address issues beyond the original objectives). Because the content of each document was both unique and substantial, STAC chose to publish them as stand-alone documents with authorship attribution. In the second step, a steering committee developed a series of framing questions to guide the preparation of this report that would meet the objective of identifying gaps and uncertainties in achieving the Bay TMDL and water quality standards. Coeditors Stephenson and Wardrop, supported to great extent by a subgroup of the Steering Committee (Leonard Shabman, Zach Easton, Jeremy Testa, William Dennison, Kenny Rose, and Mark Monaco) were tasked with assembling ideas and contributions to write a single draft text, drawing material from the aforementioned resource documents, STAC and Chesapeake Bay Program reports, the scientific literature, and a limited amount of additional analyses performed in collaboration with Bay Program scientists. The resulting report was then submitted for several reviews by both steering committee members and the membership at-large to produce a consensus report.

Maryland, Virginia↗

USGS2007

Regional Studies of the Potwar Plateau Area, Northern Pakistan

The papers in this volume are products of a cooperative program between the Geological Survey of Pakistan (GSP) and the U.S. Geological Survey (USGS), sponsored by the Government of Pakistan and the U.S. Agency for International Development. The focus of the program, the Coal Resources Exploration and Assessment Program (COALREAP), was to explore and assess Pakistan?s indigenous coal resources. As part of COALREAP, GSP and USGS geologists conducted regional geologic studies from 1988 to 1991 of the coal-bearing areas in the Potwar region of northern Pakistan. A reference section was selected from which to obtain faunal and floral analyses. The composite sections at Nammal Pass and Nammal Dam served as the basis for this regional reference. Although this Bulletin 2078 is being released in 2007, the writing and technical reviews were completed in 1993, and the chapters reflect the work done until that time. During the long production process for the Bulletin, which ultimately resulted in the oversize plates being digitized, the scientific content of the chapters was not changed, and most reports published since 1993 were not cited. A change in the age of the Patala Formation is discussed below [in the full preface], but the age discussions and illustrations in the chapters were not updated.

Bulletin↗

USGS2013

Research strategies for addressing uncertainties

There is an immense volume of information pertaining to research needs for addressing climate change uncertainties and resolving key information gaps. Fortunately, multiple independent efforts to establish research priorities have yielded similar results. Input on research needs is being used to craft national scientific priorities and strategies that are being implemented regionally by agencies and organizations. A number of regionally based efforts are already underway to aggregate and synthesize climate-related management needs and research priorities. Landscape Conservation Cooperatives and Climate Science Centers, funded by the Department of the Interior, are conducting strategic syntheses of common resource-management priorities and related science needs across the Southwest, and many of these priorities and needs are related to climate variability and change. The present Assessment includes many examples of the types of research that are needed to address key climate science uncertainties. The Assessment also includes examples of information needs related to understanding climate effects on systems (human, biophysical, ecosystems, and others) in the Southwest. Implementation of research strategies will increase understanding and improve the ability of the scientific community to anticipate the direction or magnitude of future climate-related change in these systems. The assembly of experts for the other chapters of this document provided a unique opportunity to draw upon the authors’ collective expertise to share knowledge about priority research strategies. The peer-reviewed information sources assessed in this chapter highlight research strategies and priorities established by the research community. Other sources cover priorities that are based primarily on management and policy needs. In the latter type, the sources represent the consensus of senior leaders of organizations, generally with substantial input and advice from the organizations’ technical and scientific experts.

Book chapter↗

USGS2008

Potentiometric Surface in the Sparta-Memphis Aquifer of the Mississippi Embayment, Spring 2007

The most widely used aquifer for industry and public supply in the Mississippi embayment in Arkansas, Louisiana, Mississippi, and Tennessee is the Sparta-Memphis aquifer. Decades of pumping from the Sparta-Memphis aquifer have affected ground-water levels throughout the Mississippi embayment. Regional assessments of water-level data from the aquifer are important to document regional water-level conditions and to develop a broad view of the effects of ground-water development and management on the sustainability and availability of the region's water supply. This information is useful to identify areas of water-level declines, identify cumulative areal declines that may cross State boundaries, evaluate the effectiveness of ground-water management strategies practiced in different States, and identify areas with substantial data gaps that may preclude effective management of ground-water resources. A ground-water flow model of the northern Mississippi embayment is being developed by the Mississippi Embayment Regional Aquifer Study (MERAS) to aid in answering questions about ground-water availability and sustainability. The MERAS study area covers parts of eight states including Alabama, Arkansas, Illinois, Kentucky, Louisiana, Mississippi, Missouri, and Tennessee and covers approximately 70,000 square miles. The U.S. Geological Survey (USGS) and the Mississippi Department of Environmental Quality Office of Land and Water Resources measured water levels in wells completed in the Sparta-Memphis aquifer in the spring of 2007 to assist in the MERAS model calibration and to document regional water-level conditions. Measurements by the USGS and the Mississippi Department of Environmental Quality Office of Land and Water Resources were done in cooperation with the Arkansas Natural Resources Commission; the Arkansas Geological Survey; Memphis Light, Gas and Water; Shelby County, Tennessee; and the city of Germantown, Tennessee. In 2005, total water use from the Sparta-Memphis aquifer in the Mississippi embayment was about 540 million gallons per day (Mgal/d). Water use from the Sparta-Memphis aquifer was about 170 Mgal/d in Arkansas, about 68 Mgal/d in Louisiana, about 97 Mgal/d in Mississippi, and about 205 Mgal/d in Tennessee. The author acknowledges, with great appreciation, the efforts of the personnel in the U.S. Geological Survey Water Science Centers of Arkansas, Kentucky, Louisiana, Mississippi, Missouri, and Tennessee, and the Mississippi Department of Environmental Quality Office of Land and Water Resources that participated in the planning, water-level measurement, data evaluation, and review of the potentiometric-surface map. Without the contribution of data and the technical assistance of their staffs, this report would not have been completed.

Scientific Investigations Map↗

USGS2008

Landsat continuity: Issues and opportunities for land cover monitoring

Initiated in 1972, the Landsat program has provided a continuous record of earth observation for 35 years. The assemblage of Landsat spatial, spectral, and temporal resolutions, over a reasonably sized image extent, results in imagery that can be processed to represent land cover over large areas with an amount of spatial detail that is absolutely unique and indispensable for monitoring, management, and scientific activities. Recent technical problems with the two existing Landsat satellites, and delays in the development and launch of a successor, increase the likelihood that a gap in Landsat continuity may occur. In this communication, we identify the key features of the Landsat program that have resulted in the extensive use of Landsat data for large area land cover mapping and monitoring. We then augment this list of key features by examining the data needs of existing large area land cover monitoring programs. Subsequently, we use this list as a basis for reviewing the current constellation of earth observation satellites to identify potential alternative data sources for large area land cover applications. Notions of a virtual constellation of satellites to meet large area land cover mapping and monitoring needs are also presented. Finally, research priorities that would facilitate the integration of these alternative data sources into existing large area land cover monitoring programs are identified. Continuity of the Landsat program and the measurements provided are critical for scientific, environmental, economic, and social purposes. It is difficult to overstate the importance of Landsat; there are no other systems in orbit, or planned for launch in the short-term, that can duplicate or approach replication, of the measurements and information conferred by Landsat. While technical and political options are being pursued, there is no satellite image data stream poised to enter the National Satellite Land Remote Sensing Data Archive should system failures occur to Landsat-5 and -7.

Remote Sensing of Environment↗

USGS2020

Communicating hazards—A social science review to meet U.S. Geological Survey needs

This report is for U.S. Geological Survey (USGS)—and any other—hazard scientists who want to improve the understanding and use of their scientific information, particularly by non-experts. In order for people to use science, they need to understand it. The highly technical, specialized nature of scientific information makes that difficult, particularly when few scientists are trained to communicate with people outside their fields. These issues are of special importance to the USGS because it has many users who are not scientists and because it develops and applies hazard science to help protect the safety, security, and economic well-being of our Nation. In 2010, the Science Application for Risk Reduction group at the USGS discovered the Center for Research on Environmental Decisions (CRED) guide, “The Psychology of Climate Change Communication.” Ever since, a growing number of USGS staff who need to communicate about hazards have used that guide and have asked CRED for a companion report dedicated to hazard communication to harness knowledge from more than 50 years of social science research. In 2016, the USGS and CRED launched a collaboration to develop that companion report. Ultimately, a CRED hazard communication guide would be a Columbia University publication with a wide focus and would include many hazards that are outside the USGS purview. This report is a first step and concentrates strictly on hazard communication needs at the USGS. To identify those needs and tailor this effort to USGS hazard communication priorities, this collaboration began with telephone interviews and an online survey of USGS staff. This report is the result; it summarizes social science research and experience in the areas of hazard communication that USGS participants deemed most important to include.

Circular↗

USGS1992

Salmonid whirling disease

This paper provides the latest scientific and technical advances in the management of salmonid whirling disease caused by the myxosporean Myxobolus cerebralis (Syn. Myxosoma cerebralis). The complete life cycle of the parasite and the biology of the infective agent to fish, the actinosporean Triactinomyxon stage, are reviewed, and suggested procedures for detection, identification, and control of the disease are discussed. The paper offers sources of information and related reference materials of interest to fish culturists, fishery biologists, and students.

Fish and Wildlife Leaflet↗

USGS2025

STREAMS guidelines: Standards for technical reporting in environmental and host-associated microbiome studies

The interdisciplinary nature of microbiome research, coupled with the generation of complex multi-omics data, makes knowledge sharing challenging. The Strengthening the Organization and Reporting of Microbiome Studies (STORMS) guidelines provide a checklist for the reporting of study information, experimental design and analytical methods within a scientific manuscript on human microbiome research. Here, in this Consensus Statement, we present the standards for technical reporting in environmental and host-associated microbiome studies (STREAMS) guidelines. The guidelines expand on STORMS and include 67 items to support the reporting and review of environmental (for example, terrestrial, aquatic, atmospheric and engineered), synthetic and non-human host-associated microbiome studies in a standardized and machine-actionable manner. Based on input from 248 researchers spanning 28 countries, we provide detailed guidance, including comparisons with STORMS, and case studies that demonstrate the usage of the STREAMS guidelines. STREAMS, like STORMS, will be a living community resource updated by the Consortium with consensus-building input of the broader community.

Nature Microbiology↗

USGS1907

Pollution of Illinois and Mississippi Rivers by Chicago sewage, a digest of the testimony taken in the case of the State of Missouri v. the State of Illinois and the Sanitary District of Chicago

The testimony taken in the suit of the State of Missouri against the State of Illinois and the sanitary district of Chicago comprises the best symposium on river pollution, its biological and chemical aspects, and its general and special sanitary significance that has ever been assembled. The contentions of both parties to the suit' are supported by the most eminently qualified men in the United States. The evidence presented and the discussions recorded are therefore of unique importance. The final record of testimony occupies 8,000 printed pages, much of which is irrelevant. This digest of testimony is the result of an attempt to recover the valuable material and present it in concise form. A consistent endeavor has been made by the reviewer to eliminate all personal opinions with reference to the issue and to make an impartial presentation of so much of the testimony as in his opinion appears to be relevant and of scientific importance. It will be well to remember in this connection that any digest of so large a volume of testimony must be the result of a final exercise of personal opinion by the reviewer as to those parts which may best be excluded. Naturally opinions will differ on this point; therefore it will be strange if many of those familiar with the case do not find that certain portions of testimony which they consider most important are passed over in this digest without reference. Controversies between counsel, objections to the admission of testimony, legal technicalities and quibbles, badgering cross-examination, and in general all the testimony introduced for purposes of mere corroboration have been disregarded. The object has been to present a faithful statement of the scientific phases of the testimony to the exclusion, if need be, of the legal aspect of the case.

Illinois, Missouri↗

USGS2012

Impacts of climate change on biodiversity, ecosystems, and ecosystem services: technical input to the 2013 National Climate Assessment

Ecosystems, and the biodiversity and services they support, are intrinsically dependent on climate. During the twentieth century, climate change has had documented impacts on ecological systems, and impacts are expected to increase as climate change continues and perhaps even accelerates. This technical input to the National Climate Assessment synthesizes our scientific understanding of the way climate change is affecting biodiversity, ecosystems, ecosystem services, and what strategies might be employed to decrease current and future risks. Building on past assessments of how climate change and other stressors are affecting ecosystems in the United States and around the world, we approach the subject from several different perspectives. First, we review the observed and projected impacts on biodiversity, with a focus on genes, species, and assemblages of species. Next, we examine how climate change is affecting ecosystem structural elements—such as biomass, architecture, and heterogeneity—and functions—specifically, as related to the fluxes of energy and matter. People experience climate change impacts on biodiversity and ecosystems as changes in ecosystem services; people depend on ecosystems for resources that are harvested, their role in regulating the movement of materials and disturbances, and their recreational, cultural, and aesthetic value. Thus, we review newly emerging research to determine how human activities and a changing climate are likely to alter the delivery of these ecosystem services. This technical input also examines two cross-cutting topics. First, we recognize that climate change is happening against the backdrop of a wide range of other environmental and anthropogenic stressors, many of which have caused dramatic ecosystem degradation already. This broader range of stressors interacts with climate change, and complicates our abilities to predict and manage the impacts on biodiversity, ecosystems, and the services they support. The second cross-cutting topic is the rapidly advancing field of climate adaptation, where there has been significant progress in developing the conceptual framework, planning approaches, and strategies for safeguarding biodiversity and other ecological resources. At the same time, ecosystem-based adaptation is becoming more prominent as a way to utilize ecosystem services to help human systems adapt to climate change. In this summary, we present key findings of the technical input, focusing on themes that can be found throughout the report. Thus, this summary takes a more integrated look at the question of how climate change is affecting our ecological resources, the implications for humans, and possible response strategies. This integrated approach better reflects the impacts of climate in the real world, where changes in ecosystem structure or function will alter the viability of different species and the efficacy of ecosystem services. Likewise, adaptation to climate change will simultaneously address a range of conservation goals. Case studies are used to illustrate this complete picture throughout the report; a snapshot of one case study, 2011 Las Conchas, New Mexico Fire , is included in this summary.

Report↗

USGS1996

Damaging earthquakes: A scientific laboratory

This paper reviews the principal lessons learned from multidisciplinary postearthquake investigations of damaging earthquakes throughout the world during the past 15 years. The unique laboratory provided by a damaging earthquake in culturally different but tectonically similar regions of the world has increased fundamental understanding of earthquake processes, added perishable scientific, technical, and socioeconomic data to the knowledge base, and led to changes in public policies and professional practices for earthquake loss reduction.

Conference Paper↗

USGS2013

Caveats on tomographic images

Geological and geodynamic models of the mantle often rely on joint interpretations of published seismic tomography images and petrological/geochemical data. This approach tends to neglect the fundamental limitations of, and uncertainties in, seismic tomography results. These limitations and uncertainties involve theory, correcting for the crust, the lack of rays throughout much of the mantle, the difficulty in obtaining the true strength of anomalies, choice of what background model to subtract to reveal anomalies, and what cross-sections to select for publication. The aim of this review is to provide a relatively non-technical summary of the most important of these problems, collected together in a single paper, and presented in a form accessible to non-seismologists. Appreciation of these issues is essential if final geodynamic models are to be robust, and required by the scientific observations.

Terra Nova↗

USGS2013

Historical methane hydrate project review

In 1995, U.S. Geological Survey made the first systematic assessment of the volume of natural gas stored in the hydrate accumulations of the United States. That study, along with numerous other studies, has shown that the amount of gas stored as methane hydrates in the world greatly exceeds the volume of known conventional gas resources. However, gas hydrates represent both a scientific and technical challenge and much remains to be learned about their characteristics and occurrence in nature. Methane hydrate research in recent years has mostly focused on: (1) documenting the geologic parameters that control the occurrence and stability of gas hydrates in nature, (2) assessing the volume of natural gas stored within various gas hydrate accumulations, (3) analyzing the production response and characteristics of methane hydrates, (4) identifying and predicting natural and induced environmental and climate impacts of natural gas hydrates, and (5) analyzing the effects of methane hydrate on drilling safety. Methane hydrates are naturally occurring crystalline substances composed of water and gas, in which a solid water-‐lattice holds gas molecules in a cage-‐like structure. The gas and water becomes a solid under specific temperature and pressure conditions within the Earth, called the hydrate stability zone. Other factors that control the presence of methane hydrate in nature include the source of the gas included within the hydrates, the physical and chemical controls on the migration of gas with a sedimentary basin containing methane hydrates, the availability of the water also included in the hydrate structure, and the presence of a suitable host sediment or “reservoir”. The geologic controls on the occurrence of gas hydrates have become collectively known as the “methane hydrate petroleum system”, which has become the focus of numerous hydrate research programs. Recognizing the importance of methane hydrate research and the need for a coordinated effort, the U.S. Congress enacted Public Law 106-‐193, the Methane Hydrate Research and Development Act of 2000. This Act called for the Secretary of Energy to begin a methane hydrate research and development program in consultation with other U.S. federal agencies. At the same time a new methane hydrate research program had been launched in Japan by the Ministry of International Trade and Industry to develop plans for a methane hydrate exploratory drilling project in the Nankai Trough. Since this early start we have seen other countries including India, China, Canada, and the Republic of Korea establish large gas hydrate research and development programs. These national led efforts have also included the investment in a long list of important scientific research drilling expeditions and production test studies that have provided a wealth of information on the occurrence of methane hydrate in nature. The most notable expeditions and projects have including the following: -‐Ocean Drilling Program Leg 164 (1995) -‐Japan Nankai Trough Project (1999-‐2000) -‐Ocean Drilling Program Leg 204 (2004) -‐Japan Tokai-‐oki to Kumano-‐nada Project (2004) -‐Gulf of Mexico JIP Leg I (2005) -‐Integrated Ocean Drilling Program Expedition 311 (2005) -‐Malaysia Gumusut-‐Kakap Project (2006) -‐India NGHP Expedition 01 (2006) -‐China GMGS Expedition 01 (2007) -‐Republic of Korea UBGH Expedition 01 (2007) -‐Gulf of Mexico JIP Leg II (2009) -‐Republic of Korea UBGH Expedition 02 (2010) -‐MH-‐21 Nankai Trough Pre-‐Production Expedition (2012-‐2013) -‐Mallik Gas Hydrate Testing Projects (1998/2002/2007-‐2008) -‐Alaska Mount Elbert Stratigraphic Test Well (2007) -‐Alaska Iġnik Sikumi Methane Hydrate Production Test Well (2011-‐2012) Research coring and seismic programs carried out by the Ocean Drilling Program (ODP) and Integrated Ocean Drilling Program (IODP), starting with the ODP Leg 164 drilling of the Blake Ridge in the Atlantic Ocean in 1995, have also contributed greatly to our understanding of the geologic controls on the formation, occurrence, and stability of gas hydrates in marine environments. For the most part methane hydrate research expeditions carried out by the ODP and IODP provided the foundation for our scientific understanding of gas hydrates. The methane hydrate research efforts under ODP-‐IODP have mostly dealt with the assessment of the geologic controls on the occurrence of gas hydrate, with a specific goal to study the role methane hydrates may play in the global carbon cycle. Over the last 10 years, national led methane hydrate research programs, along with industry interest have led to the development and execution of major methane hydrate production field test programs. Two of the most important production field testing programs have been conducted at the Mallik site in the Mackenzie River Delta of Canada and in the Eileen methane hydrate accumulation on the North Slope of Alaska. Most recently we have also seen the completion of the world’s first marine methane hydrate production test in the Nankai Trough in the offshore of Japan. Industry interest in gas hydrates has also included important projects that have dealt with the assessment of geologic hazards associated with the presence of hydrates. The scientific drilling and associated coring, logging, and borehole monitoring technologies developed in the long list of methane hydrate related field studies are one of the most important developments and contributions associated with methane hydrate research and development activities. Methane hydrate drilling has been conducted from advanced scientific drilling platforms like the JOIDES Resolution and the D/V Chikyu, which feature highly advanced integrated core laboratories and borehole logging capabilities. Hydrate research drilling has also included the use of a wide array of industry, geotechnical and multi-‐service ships. All of which have been effectively used to collect invaluable geologic and engineering data on the occurrence of methane hydrates throughout the world. Technologies designed specifically for the collection and analysis of undisturbed methane hydrate samples have included the development of a host of pressure core systems and associated specialty laboratory apparatus. The study and use of both wireline conveyed and logging-‐while-‐drilling technologies have also contributed greatly to our understanding of the in-‐situ nature of hydrate-‐bearing sediments. Recent developments in borehole instrumentation specifically designed to monitor changes associated with hydrates in nature through time or to evaluate the response of hydrate accumulations to production have also contributed greatly to our understanding of the complex nature and evolution of methane hydrate systems. Our understanding of how methane hydrates occur and behave in nature is still growing and evolving – we do not yet know if methane hydrates can be economically produced, nor do we know fully the role of hydrates as an agent of climate change or as a geologic hazard. But it is known for certain that scientific drilling has contributed greatly to our understanding of hydrates in nature and will continue to be a critical source of the information to advance our understanding of methane hydrates.

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