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At least 343 records · Page 19Linked to original sources

The interaction between biology and the management of aquatic macrophytes

‘Management’ refers to controlling nuisance aquatic species and to restoring or restructing aquatic plant communities. Producing stable, diverse, aquatic plant communities containing a high percentage of desirable species is a primary management goal. There are a variety of techniques including harvesting, herbicides, water-level fluctuation, sediment alteration, nutrient limitation, light alteration, and biological controls which can be used for managing macrophytes. These techniques are briefly reviewed along with discussions of biological considerations important to the efficacy of the technique and the environmental impacts of the technique. There is a growing interest in restoring and restructing aquatic plant communities. Techniques for community restoration are discussed as are emerging management technologies using growth regulators and bioengineering. New management technologies will probably be limited by costs and environmental impacts. In the near future, better macrophyte management will come through better planning and more effective use of present technology. The challenge is to make current planning and management techniques more effective through increased biological inputs. The potential for biological input ranges from subcellular biology to species biology, to community and ecosystem biology. Some information needs are identified.

Aquatic Botany

Measuring suspended sediment

Suspended sediment in streams and rivers can be measured using traditional instruments and techniques and (or) surrogate technologies. The former, as described herein, consists primarily of both manually deployed isokinetic samplers and their deployment protocols developed by the Federal Interagency Sedimentation Project. They are used on all continents other than Antarctica. The reliability of the typically spatially rich but temporally sparse data produced by traditional means is supported by a broad base of scientific literature since 1940. However, the suspended sediment surrogate technologies described herein – based on hydroacoustic, nephelometric, laser, and pressure difference principles – tend to produce temporally rich but in some cases spatially sparse datasets. The value of temporally rich data in the accuracy of continuous sediment-discharge records is hard to overstate, in part because such data can often overcome the shortcomings of poor spatial coverage. Coupled with calibration data produced by traditional means, surrogate technologies show considerable promise toward providing the fluvial sediment data needed to increase and bring more consistency to sediment-discharge measurements worldwide.

Book chapter

High-frequency, long-duration water sampling in acid mine drainage studies: a short review of current methods and recent advances in automated water samplers

Hand-collected grab samples are the most common water sampling method but using grab sampling to monitor temporally variable aquatic processes such as diel metal cycling or episodic events is rarely feasible or cost-effective. Currently available automated samplers are a proven, widely used technology and typically collect up to 24 samples during a deployment. However, these automated samplers are not well suited for long-term sampling in remote areas or in freezing conditions. There is a critical need for low-cost, long-duration, high-frequency water sampling technology to improve our understanding of the geochemical response to temporally variable processes. This review article will examine recent developments in automated water sampler technology and utilize selected field data from acid mine drainage studies to illustrate the utility of high-frequency, long-duration water sampling.

Applied Geochemistry

U.S. Department of Energy's Regional Carbon Sequestration Partnership Program: Overview

The U.S. Department of Energy (DOE) has formed a nationwide network of seven regional partnerships to help determine the best approaches for capturing and permanently storing gases that can contribute to global climate change. The Regional Carbon Sequestration Partnerships (RCSPs) are tasked with determining the most suitable technologies, regulations, and infrastructure for carbon capture, transport, and storage in their areas of the country and parts of Canada. The seven partnerships include more than 350 state agencies, universities, national laboratories, private companies, and environmental organizations, spanning 42 states, two Indian nations, and four Canadian provinces. The Regional Partnerships initiative is being implemented in three phases: ???Characterization Phase (2003-2005): The objective was to collect data on CO 2 sources and sinks and develop the human capital to support and enable future carbon sequestration field tests and deployments. The completion of this Phase was marked by release of the Carbon Sequestration Atlas of the United States and Canada-Version 1 which included a common methodology for capacity assessment and reported over 3,000GT of storage capacity in saline formations, depleted oil and gas fields, and coal seams.???Validation Phase (2005-2009): The objective is to plan and implement small-scale (<1??million tons CO 2 ) field testing of storage technologies in areas determined to be favorable for carbon storage. The partnerships are currently conducting over 20 small-scale geologic field tests and 11 terrestrial field tests.???Development Phase (2008-2018): The primary objective is the development of large-scale (>1??million tons of CO 2 ) Carbon Capture and Storage (CCS) projects, which will demonstrate that large volumes of CO 2 can be injected safely, permanently, and economically into geologic formations representative of large storage capacity. Even though the RCSP Program is being implemented in three phases, it should be viewed as an integrated whole, with many of the goals and objectives transitioning from one phase to the next. Accomplishments and results from the Characterization Phase have helped to refine goals and activities in the Validation and Deployment Phases. The RCSP Program encourages and requires open information sharing among its members by sponsoring both general workshops and meetings to facilitate information exchange. Although each RCSP has its own objectives and field tests, mutual cooperation has been an important part of the Program thus far. The primary goal of the RCSP initiative is to promote the development of a regional framework and the infrastructure necessary to validate and deploy carbon sequestration technologies within each Partnership's region. ?? 2009 Elsevier Ltd. All rights reserved.

Conference Paper

A census of marine life: Unknowable or just unknown?

As an introduction to the entire volume, this article outlines the relationships among the five elements of the Census of Marine Life (CoML) that create new knowledge: (1) The Ocean Biogeographic Information System (OBIS), a marine component of the Global Biodiversity Information Facility, links marine databases around the world to provide an Internet accessible, dynamic interface for comparing species-level, geo-referenced biodiversity data in relation to ocean habitats. The entire CoML field project data will be managed in and accessible through OBIS. (2) The History of Marine Animal Populations (HMAP) is a unique new synthesis of historical and biological research that will document marine biodiversity, globally, up to 500 years ago, before significant human impact, and store it in formats compatible with modern data in OBIS. (3) The Scientific Committee on Oceanic Research Working Group 118 monitors and recommends advanced marine technologies, ready to be routinely used in CoML field projects. (4) CoML Initial Field Projects develop and calibrate these technologies in selected regions to facilitate and accelerate global biodiversity research. As calibrated technologies and protocols are adopted in many regions, qualitative and quantitative biodiversity discoveries accumulate. (5) The Future of Marine Animal Populations (FMAP) program will insure that the data in OBIS are suitable for modeling and predicting changes in global biodiversity in response to fishing, pollution, and climate change challenges. It will make datasets available for hindcasting and forecasting analyses linked to physical ocean observations and assist in documenting the impacts of conservation efforts on sustainability.

Oceanologica Acta

Quantitative polymerase chain reaction (PCR) for detection of aquatic animal pathogens in a diagnostic laboratory setting

Real-time, or quantitative, polymerase chain reaction (qPCR) is quickly supplanting other molecular methods for detecting the nucleic acids of human and other animal pathogens owing to the speed and robustness of the technology. As the aquatic animal health community moves toward implementing national diagnostic testing schemes, it will need to evaluate how qPCR technology should be employed. This review outlines the basic principles of qPCR technology, considerations for assay development, standards and controls, assay performance, diagnostic validation, implementation in the diagnostic laboratory, and quality assurance and control measures. These factors are fundamental for ensuring the validity of qPCR assay results obtained in the diagnostic laboratory setting.

Journal of Aquatic Animal Health

Implementation of unmanned aircraft systems by the U.S. Geological Survey

The U.S. Geological Survey (USGS) Unmanned Aircraft Systems (UAS) Project Office is leading the implementation of UAS technology in anticipation of transforming the research methods and management techniques employed across the Department of the Interior. UAS technology is being made available to monitor environmental conditions, analyse the impacts of climate change, respond to natural hazards, understand landscape change rates and consequences, conduct wildlife inventories and support related land management missions. USGS is teaming with the Department of the Interior Aviation Management Directorate (AMD) to lead the safe and cost-effective adoption of UAS technology by the Department of the Interior Agencies and USGS scientists.

Geocarto International

Green fluorescent protein is lighting up fungal biology

Prasher ( 42 ) cloned a cDNA for the green fluorescent protein (GFP) gene from the jellyfish Aequorea victoria in 1992. Shortly thereafter, to the amazement of many investigators, this gene or derivatives thereof were successfully expressed and conferred fluorescence to bacteria and Caenorhabditis elegans cells in culture ( 10 , 31 ), followed by yeast ( 24 , 39 ), mammals ( 40 ), Drosophila ( 66 ), Dictyostelium ( 23 , 30 ), plants ( 28 , 49 ), and filamentous fungi ( 54 ). The tremendous success of GFP as a reporter can be attributed to unique qualities of this 238-amino-acid, 27-kDa protein which absorbs light at maxima of 395 and 475 nm and emits light at a maximum of 508 nm. The fluorescence of GFP requires only UV or blue light and oxygen, and therefore, unlike the case with other reporters (&beta;-glucuronidase, &beta;-galacturonidase, chloramphenicol acetyltransferase, and firefly luciferase) that rely on cofactors or substrates for activity, in vivo observation of gfp expression is possible with individual cells, with cell populations, or in whole organisms interacting with symbionts or environments in real time. Complications caused by destructive sampling, cell permeablization for substrates, or leakage of products do not occur. Furthermore, the GFP protein is extremely stable in vivo and has been fused to the C or N terminus of many cellular and extracellular proteins without a loss of activity, thereby permitting the tagging of proteins for gene regulation analysis, protein localization, or specific organelle labeling. The mature protein resists many proteases and is stable up to 65&deg;C and at pH 5 to 11, in 1% sodium dodecyl sulfate or 6 M guanidinium chloride (reviewed in references 17 and 67 ), and in tissue fixed with formaldehyde, methanol, or glutaraldehyde. However, GFP loses fluorescence in methanol-acetic acid (3:1) and can be masked by autofluorescent aldehyde groups in tissue fixed with glutaraldehyde. Fluorescence is optimal at pH 7.2 to 8.0 ( 67 ). Limitations on GFP as a reporter for some applications are its low turnover rate, 2-h lag time for autoactivation of its chromophore, improper folding at high temperatures (37&deg;C), which results in nonfluorescent and insoluble forms of the protein, and requirement for oxygen, which is not present in equal concentrations in all subcellular locations or cell types (reviewed in references 17 and 67 ). These characteristics of GFP, however, have not posed a problem for many applications, and mutant forms of GFP that have an ability to fold properly at high temperatures, increased solubility and fluorescence, reduced photobleaching ( 16 , 17 , 51 ), and reduced half-lives ( 1 ) have been developed. Coupled with fluorescence-activated cell sorting, confocal microscopy or quantitative image analysis techniques, GFP technology can be used to isolate transformed cells or specific cell types from populations of cells ( 14 ), to quantify gene expression of individual cells within whole organisms ( 8 ), or to assess the dispersal and biomass of organisms in complex environments, such as in animal or plant hosts ( 38 , 59 ), in biofilms ( 55 ), in fermentors ( 41 ), on leaf surfaces ( 53 , 61 ), or in soils ( 2 ). The vast majority of studies utilizing GFP expression in fungi have been with yeast (reviewed in reference 13 ). Ustilago maydis was the first filamentous fungus for which successful expression of gfp was reported ( 54 ), followed closely by Aspergillus nidulans ( 22 , 57 ) and Aureobasidium pullulans ( 61 ). Presently, gfp expression has been reported for 16 species comprising 12 genera of filamentous fungi, including Colletotrichum ( 21 , 44 ), Mycosphaerella ( 52 ), Magnaporthe ( 32 , 35 ), Cochliobolus ( 38 ), Trichoderma ( 2 , 70 ), Podospora ( 5 ), Sclerotinia ( 63 ), Schizophyllum ( 37 ), Aspergillus ( 20 , 47 , 50 ) and Phytophthora ( 7 , 62 ). In this review we draw on published reports, with the goal of providing an overview of GFP technology as it applies to the biology of filamentous fungi. These reports are not exhaustive of potential applications of GFP technology, as examples of genomic approaches to utilizing GFP in bacterial and yeast systems attest ( 4 , 46 , 60 , 65 ). Expression of gfp in filamentous fungi requires a gfp variant that is efficiently translated in fungi, a transformation system, and a fungal promoter that satisfies the requirements of a given experimental objective. Transformation of fungi has recently been reviewed by Gold et al. ( 26 ). Robinson and Sharon ( 44 ) suggest that GFP can actually be used to optimize transformation protocols. In addition to reporting the construction of a new fungal transformation vector that expresses SGFP under the control of the ToxA gene promoter from Pyrenophora tritici-repentis ( 12 ) and demonstrating its use in plant pathogens belonging to eight different genera of filamentous fungi ( Fusarium, Botrytis, Pyrenophora, Alternaria, Cochliobolus, Sclerotinia, Colletotrichum , and Verticillium ), in this review we also enumerate and describe a comprehensive list of vectors for expressing GFP in fungi.

Applied and Environmental Microbiology

Overcoming the momentum of anachronism: American geologic mapping in a twenty-first-century world

The practice of geologic mapping is undergoing conceptual and methodological transformation. Profound changes in digital technology in the past 10 yr have potential to impact all aspects of geologic mapping. The future of geologic mapping as a relevant scientific enterprise depends on widespread adoption of new technology and ideas about the collection, meaning, and utility of geologic map data. It is critical that the geologic community redefine the primary elements of the traditional paper geologic map and improve the integration of the practice of making maps in the field and office with the new ways to record, manage, share, and visualize their underlying data. A modern digital geologic mapping model will enhance scientific discovery, meet elevated expectations of modern geologic map users, and accommodate inevitable future changes in technology.

GSA Special Papers

Bird predation obscures detection of acoustic telemetry tags in fish

Increasing application of acoustic telemetry for determining survival, migration and habitat use of fishes highlights the need to improve interpretation of tracks that end abruptly: when is fishing mortality, predation, or some other cause to be inferred? Significant technological advances have led to the development of tags that “sense” predation and can be used to infer information about the type of predator that consumed the tagged fish. However, growing evidence suggests that bird predation is not effectively quantified by the technology. We hypothesized that reduction in sound transmission from acoustic tags in the gut of a bird combined with short bird diving intervals would eliminate detections of acoustic telemetry tags from the surface and severely reduce detection efficiency at depth. We test this hypothesis indirectly with two experiments using cormorant carcasses containing tagged fish in which carcasses were either tethered to a mooring for several hours or lowered through the water to simulate diving behavior. Detection of tagged prey fish in the gut of bird carcasses was severely reduced or negated completely, supporting our hypothesis. By comparison, as expected, tagged fish that were not in the gut of bird carcasses were detected at a higher frequency. Depth and distance to passive moored receivers also affected detection probability of tagged fish with more detections at depth and when closer to the receiver. Our results emphasized the importance of accounting for avian predation of tagged fish in studies of prey species in surface waters. Further, while recent development of predation sensing tags has illustrated a few examples of bird predation, our results demonstrate that determining that a tagged fish has been consumed by a diving bird will be difficult and will likely require alternative methods or technologies.

Animal Biotelemetry

The effects of tissue fixation on sequencing and transcript abundance of nucleic acids from microdissected liver samples of smallmouth bass (Micropterus dolomieu)

There is an increasing emphasis on effects-based monitoring to document responses associated with exposure to complex mixtures of chemicals, climate change, pathogens, parasites and other environmental stressors in fish populations. For decades aquatic monitoring programs have included the collection of tissues preserved for microscopic pathology. Consequently, formalin-fixed, paraffin-embedded (FFPE) tissue can be an important reservoir of nucleic acids as technologies emerge that utilize molecular endpoints. Despite the cross-linking effects of formalin, its impact on nucleic acid quality and concentration, amplification, and sequencing are not well described. While fresh-frozen tissue is optimal for working with nucleic acids, FFPE samples have been shown to be conducive for molecular studies. Laser capture microdissection (LCM) is one technology which allows for collection of specific regions or cell populations from fresh or preserved specimens with pathological alterations, pathogens, or parasites. In this study, smallmouth bass (Micropterus dolomieu) liver was preserved in three different fixatives, including 10% neutral buffered formalin (NBF), Z-Fix® (ZF), and PAXgene® (PG) for four time periods (24 hr, 48 hr, seven days, and 14 days). Controls consisted of pieces of liver preserved in RNALater® or 95% ethanol. Smallmouth bass were chosen as they are an economically important sportfish and have been utilized as indicators of exposure to endocrine disruptors and other environmental stressors. Small liver sections were cut out with laser microdissection and DNA and RNA were purified and analyzed for nucleic acid concentration and quality. Sanger sequencing and the NanoString nCounter® technology were used to assess the suitability of these samples in downstream molecular techniques. The results revealed that of the formalin fixatives, NBF samples fixed for 24 and 48 hr were superior to ZF samples for both Sanger sequencing and the Nanostring nCounter®. The non-formalin PAXgene® samples were equally successful and they showed greater stability in nucleic acid quality and concentration over longer fixation times. This study demonstrated that small quantities of preserved tissue from smallmouth bass can be utilized in downstream molecular techniques; however, future studies will need to optimize the methods presented here for different tissue types, fish species, and pathological conditions.

PLoS ONE

Utility of shallow-water ATRIS images in defining biogeologic processes and self-similarity in skeletal scleractinia, Florida reefs

A recently developed remote-sensing instrument acquires high-quality digital photographs in shallow-marine settings within water depths of 15 m. The technology, known as the Along-Track Reef-Imaging System, provides remarkably clear, georeferenced imagery that allows visual interpretation of benthic class (substrates, organisms) for mapping coral reef habitats, as intended. Unforeseen, however, are functions new to the initial technologic purpose: interpr??table evidence for real-time biogeologic processes and for perception of scaled-up skeletal self-similarity of scleractinian microstructure. Florida reef sea trials lacked the grid structure required to map contiguous habitat and submarine topography. Thus, only general observations could be made relative to times and sites of imagery. Degradation of corals was nearly universal; absence of reef fish was profound. However, ???1% of more than 23,600 sea-trial images examined provided visual evidence for local environs and processes. Clarity in many images was so exceptional that small tracks left by organisms traversing fine-grained carbonate sand were visible. Other images revealed a compelling sense, not yet fully understood, of the microscopic wall structure characteristic of scleractinian corals. Conclusions drawn from classifiable images are that demersal marine animals, where imaged, are oblivious to the equipment and that the technology has strong capabilities beyond mapping habitat. Imagery acquired along predetermined transects that cross a variety of geomorphic features within depth limits will ( 1) facilitate construction of accurate contour maps of habitat and bathymetry without need for ground-truthing, (2) contain a strong geologic component of interpreted real-time processes as they relate to imaged topography and regional geomorphology, and (3) allow cost-effective monitoring of regional- and local-scale changes in an ecosystem by use of existing-image global-positioning system coordinates to re-image areas. Details revealed in the modern setting have taphonomic implications for what is often found in the geologic record.

Conference Paper

Long-term distributed temperature sensing monitoring for near-wellbore gas migration and gas hydrate formation

Well integrity monitoring has always been a critical component of subsurface oil and gas operations. Distributed fiber-optic sensing is an emerging technology that shows great promise for monitoring processes, both in boreholes and in other settings. In this study, we present a case study of using distributed temperature sensing (DTS) technology to monitor a cemented and plugged well in the Alaska North Slope (ANS). The well was drilled as part of a long-term gas hydrate study, and the downhole DTS data were recorded over a period of approximately 2 years. By applying a temporal gradient and removing instrument instability noise, we reveal subtle (<0.001°C/h) thermal anomalies, which are characterized by brief warming periods followed by longer cooling periods at discrete depths along the borehole. The observed coherent events show an upward trajectory from deeper formations into the overlying permafrost interval, with the thermal anomalies concentrated in relatively coarse-grained sandstone layers. We also observe that the upward migration rate of the DTS anomalies varies with formation lithology and that there is a spatial and temporal correlation between the subsurface events and measured wellhead annular pressures. We interpret that the observed warming events represent the exothermic process of gas hydrate formation that is occurring in association with the upward migration of gas outside the well casing, and this interpretation is confirmed by numerical simulations. These observations demonstrate the ability of suitably processed DTS data to detect subtle processes and highlight the value of DTS technologies for wellbore integrity monitoring.

Alaska

Kansas geological survey's Digital Petroleum Atlas (DPA) project

The Kansas Digital Petroleum Atlas (DPA) is a new approach to generating and publishing petroleum reservoir, field, play and basin studies. Atlas products are available anywhere in the world using a standard point-and-click World-Wide-Web interface. All information and technology in the DPA can be accessed, manipulated and downloaded in order to provide efficient transfer of the technology for client-defined solutions. The DPA design provides a dynamic product that is constantly evolving through new information structures, the latest research results, and incorporation of additional data. Through complete and flexible user access to both interpretative products and underlying reservoir and well data, the DPA significantly alters the relationship between research results, data access, and the transfer of technology.

Proceedings - SPE Annual Technical Conference and

A characterization of deep-sea coral and sponge communities along the California and Oregon coast using a remotely operated vehicle on the EXPRESS 2018 expedition

Deep-sea coral and sponge (DSCS) communities serve as essential fish habitats (EFH) by providing shelter and nursery habitat, increasing diversity, and increasing prey availability (Freese and Wing, 2003; Bright, 2007; Baillon et al., 2012; Henderson et al., 2020). Threats to these long-lived, fragile organisms from bottom contact fishing gear, potential offshore renewable energy development, and ocean warming and acidification have increased the need for DSCS research along the U.S. West Coast (Gomez et al., 2018; Salgado et al., 2018; Yoklavich, et al., 2018; Gugliotti et al., 2019). The focus of these studies has varied from species distribution and abundance (Yoklavich and Love, 2005; Tissot et al., 2006) to developing and validating predictive distribution models (Huff et al., 2013; Rooper et al., 2017; Kreidler, 2020) to finding medicinal uses for corals and sponges (Essack et al., 2011; Shrestha et al., 2018). Due to the vast area of unexplored seafloor within the U.S. exclusive economic zone (EEZ; 200 nautical miles off the coast) and the technological requirements and expanse of deep-sea research, there is still much to learn about the distributions and biology of DSCS. This information is critical to resource managers for effective conservation and management of DSCS habitats. Protections are provided by the Pacific Fishery Management Council (PFMC) designation of groundfish EFH conservation areas (EFHCA) and the National Marine Sanctuaries Act (NMSA). Areas designated as EFHCA are closed to bottom trawl fishing to protect and preserve seafloor habitats. Recently the PFMC adopted Amendment 28 to the Groundfish Fishery Management Plan (GFMP; Pacific Fishery Management Council, 2019) which modified EFHCAs by closing new areas identified as vulnerable and reopening areas deemed not vulnerable. The NMSA prohibits bottom disturbance from certain activities within areas designated as national marine sanctuaries, such as oil and gas exploration or extraction, cable laying, and other forms of seabed alteration or construction that disturb benthic communities. NOAA’s Deep-Sea Coral and Research Technology Program (DSCRTP) began a 4-yr funding initiative for the U.S. West Coast in 2017. The goals of the West Coast Deep-Sea Coral Initiative (WCDSCI) were to: 1) gather baseline information on areas subject to fishing regulation changes prior to the implementation of Amendment 28; 2) improve our understanding of known DSCS bycatch “hot spots”; and 3) explore and assess DSCS resources within NOAA National Marine Sanctuaries with emphasis on areas of sanctuary resource protection and management concerns. During the first year of the program, a research cruise was developed to survey the West Coast from Oregon to California studying the DSCS ecosystems in priority areas. The 31-day expedition (9 Oct – 8 Nov, 2018) was launched from the NOAA Ship Bell M. Shimada, beginning in Newport, OR and ending in San Diego, CA. The science team assembled for this cruise were members of the EXpanding Pacific Research and Exploration of Submerged Systems (EXPRESS) campaign, which brings together researchers from federal and nonfederal institutions to collaborate on scientific expeditions targeting the deepwater areas off California, Oregon, and Washington. EXPRESS supports researchers leveraging funding, resources, personnel, and expertise to accomplish more science than would have been possible by a single entity alone. The 2018 coastwide expedition included research partners from National Marine Fisheries Service (NMFS) Southwest Fisheries Science Center (SWFSC) and Northwest Fisheries Science Center (NWFSC), National Ocean Service (Channel Islands, Cordell Bank, Greater Farallones, and Monterey Bay National Marine Sanctuaries), Bureau of Ocean Energy Management (BOEM), U.S. Geological Survey (USGS), and Monterey Bay Aquarium Research Institute (MBARI). Research objectives for the cruise were to: 1) Collect DSCS baseline information at 10 of the EFHCA sites undergoing protection modifications by the Pacific Fishery Management Council. 2) Collect DSCS and fish data at previously unexplored sites within West Coast National Marine Sanctuaries. 3) Revisit a subset of previously surveyed sites to document if changes in DCSC have occurred over time. 4) Collect information to validate BOEM supported cross-shelf habitat suitability models for DSCS. 5) Collect samples to help in identifying (and understanding) West Coast DSCS and expand use of new technologies (ROV, AUV, and environmental DNA [eDNA]). 6) Collect water samples for coastwide eDNA, nutrient, and carbon chemistry studies.

California, Oregon

Rare earth element mineral deposits in the United States

Because of their unique special chemical properties, many of the metals in the group of rare earth elements (REEs) have essential applications in 21st century technologies. Examples of products that use REEs are cell phones, computers, fluorescent and light-emitting-diode lights, flat-screen television and computer monitors, and in high-strength magnets used by clean energy technologies such as the generators of wind turbines and batteries of hybrid and electric vehicles. REEs are used in many defense applications, such as in components of jet engines, missile guidance systems, antimissile defense systems, satellites, and communication systems. The rare earth elements have become vital to manufacturing numerous high-tech products, which has been accompanied by a large increase in their demand. At the same time, there has been concern by the United States and many other Nations about the near-monopoly of mining, processing, and supply of REEs from one Nation, China. Between 2011 and 2017, China produced approximately 84 percent of the world’s REEs, and during this time the United States only produced REEs between 2012 and 2015. The U.S. production came entirely from the Mountain Pass mine in California, providing only about 4 percent of the world REE supply. Because REEs are essential for technological applications and are primarily supplied by one Nation, there has been an increased concern in identifying new sources of REEs, including economic REE deposits. In response to these concerns, since 2009, the U.S. Geological Survey (USGS) has conducted numerous studies focused on the distribution, geology, and potential resources for the REE-bearing mineral deposits in the United States. The basic characteristics of mineral deposit types that host REE enrichments in the United Sates are summarized in this report, with selected examples. Several types of REE-enriched mineral deposits are reviewed, including deposits in carbonatites, alkaline igneous rocks, sedimentary phosphate-rich rocks (phosphorite), regions containing REE-rich veins, iron oxide deposits containing REE-bearing apatite, monazite-xenotime-bearing placer deposits (heavy-mineral sands), and ion-adsorption clay deposits (REE in granite-derived regolith). A better understanding of these mineral deposits will assist in identifying domestic resources to help alleviate the dependence on imported REEs. The economic development of REE mineral deposits is affected by many factors beyond mining, such as commodity prices and mineral processing costs. Most of the REEs are hosted by minerals that have complex chemical formulas; this presents more challenges to process and extract the REEs. Continued advancements and refinements in mineral processing techniques may allow REE deposits with complex mineralogy to be economically developed in the future.

Circular

Undiscovered phosphate resources in the Caribbean region and their potential value for agricultural development

The countries of the world's humid tropical regions lack the soil fertility necessary for high agricultural productivity. A recently developed agricultural technology that increases soil fertility can make tropical agriculture highly productive, but the technique requires large inputs into the soil of phosphorus and other fertilizers and soil amendments. Use of fertilizers derived from phosphate rock is increasing greatly throughout the world, and fertilizer raw materials are being produced more and more frequently from phosphate rock deposits close to the areas of use. An increased understanding of the origin of phosphate rock in ancient oceans has enabled exploration geologists to target areas of potential mineral resource value and to search directly for deposits. However, because of the difficulty of prospecting for mineral deposits in forested tropical regions, phosphate rock deposits are not being explored for in the countries of the humid tropics, including most countries of the Caribbean region. As a result, the countries of the Caribbean must import phosphate rock or phosphorus fertilizer products. In the present trade market, imports of phosphate are too low for the initiation of new agricultural technology in the Caribbean and Central American region. A newly proposed program of discovery and development of undiscovered phosphate rock deposits revolves around reconnaissance studies, prospecting by core drilling, and analysis of bulk samples. The program should increase the chance of discovering economic phosphate rock deposits. The search for and evaluation of phosphate rock resources in the countries of the Caribbean region would take about 5 years and cost an average of $15 million per country. The program is designed to begin with high risk-low cost steps and end with low risk-high cost steps. A successful program could improve the foreign exchange positions of countries in the Caribbean region by adding earnings from agricultural product exports and by substituting domestically produced phosphate rock and fertilizer products for imported phosphate fertilizers. A successful program also could provide enough domestically produced phosphorus fertilizer products to allow initiation of new agricultural technology in the region and thus increase domestic food production. Finally, a new phosphorus fertilizer industry would create new jobs in the mining, chemical, and transportation industries of the Caribbean region.

Circular

Mapping the mineral resource base for mineral carbon-dioxide sequestration in the conterminous United States

This database provides information on the occurrence of ultramafic rocks in the conterminous United States that are suitable for sequestering captured carbon dioxide in mineral form, also known as mineral carbon-dioxide sequestration. Mineral carbon-dioxide sequestration is a proposed greenhouse gas mitigation technology whereby carbon dioxide (CO 2 ) is disposed of by reacting it with calcium or magnesium silicate minerals to form a solid magnesium or calcium carbonate product. The technology offers a large capacity to permanently store CO 2 in an environmentally benign form via a process that takes little effort to verify or monitor after disposal. These characteristics are unique among its peers in greenhouse gas disposal technologies. The 2005 Intergovernmental Panel on Climate Change report on Carbon Dioxide Capture and Storage suggested that a major gap in mineral CO 2 sequestration is locating the magnesium-silicate bedrock available to sequester the carbon dioxide. It is generally known that silicate minerals with high concentrations of magnesium are suitable for mineral carbonation. However, no assessment has been made in the United States that details their geographical distribution and extent, nor has anyone evaluated their potential for use in mineral carbonation. Researchers at Columbia University and the U.S. Geological Survey have developed a digital geologic database of ultramafic rocks in the conterminous United States. Data were compiled from varied-scale geologic maps of magnesium-silicate ultramafic rocks. The focus of our national-scale map is entirely on ultramafic rock types, which typically consist primarily of olivine- and serpentine-rich rocks. These rock types are potentially suitable as source material for mineral CO 2 sequestration.

Conterminous United States