SEARCH · Geology Reports

Results for “Contributions in Science”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

SourceResearch connectionFrom yearThrough year

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 307 records · Page 17Linked to original sources

USGS2023

Deep root activity overprints weathering of petrogenic organic carbon in shale

The oxidation of organic carbon in sedimentary bedrock (petrogenic OC, OC p e t r o "> petro ) is increasingly recognized as a potential source of CO 2 to the atmosphere. Recent studies provide evidence for the mobilization and oxidation of OC p e t r o "> petro in sedimentary bedrock during rock weathering. However, the mechanisms and rates remain uncertain, particularly where overlying soils and vegetation drive contemporaneous oxidation of recently fixed organic carbon. Here, we quantify OC p e t r o "> petro weathering across a 16 m shale depth profile in a steep, rapidly eroding forested hillslope in the Northern California Coast Ranges. We report solid and gas phase radiocarbon and stable isotope analyses of samples extracted from specialized in-situ samplers, and a supporting laboratory incubation experiment of the shale regolith. OC p e t r o "> petro is removed from the weathered bedrock at a rate of approximately 0.12 gC/m 3 yr, which is orders of magnitude lower than the rate of OC p e t r o "> petro oxidation we achieved in the laboratory with crushed samples (557.1 gC/m 3 /yr). This disparity occurs despite high O 2 ( g ) "> 2(g) content across the depth profile, indicating that physical accessibility of OC p e t r o "> petro can regulate oxidative weathering. There is no direct radiocarbon evidence of OC p e t r o "> petro oxidation in CO 2 ( g ) "> 2(g) across the upper 13 m of the weathering profile during both wet and dry seasons. Instead, vadose zone CO 2 ( g ) "> 2(g) production at the site is dominated by respiration of recently fixed carbon associated with deep rooting. OC p e t r o "> petro is clearly mobilized across the vadose zone during weathering in this rapidly eroding, oxygen-rich, biologically dynamic hillslope, but at rates far below what can be measured given the contribution of root-derived CO 2 ( g ) "> 2(g) .

California↗

USGS2006

Causes of mortality in California sea otters during periods of population growth and decline

Elevated mortality appears to be the main reason for both sluggish growth and periods of decline in the threatened California sea otter population . We assessed causes of mortality from salvage records of 3,105 beach-cast carcasses recovered from 1968 through 1999, contrasting two periods of growth with two periods of decline . Overall, an estimated 40%-60% of the deaths were not recovered and 70% of the recovered carcasses died from unknown causes . Nonetheless, several common patterns were evident in the salvage records during the periods of population decline . These included greater percentages of (1) prime age animals (3-10 yr), (2) carcasses killed by great white shark attacks, (3) carcasses recovered in spring and summer, and (4) carcasses for which the cause of death was unknown. Neither sex composition nor the proportion of carcasses dying of infectious disease varied consistently between periods of population increase and decline . The population decline from 1976 to 1984 was likely due to incidental mortality in a set-net fishery, and the decline from 1995 to 1999 may be related to a developing live-fish fishery. Long-term trends unrelated to periods of growth and decline included a decrease in per capita pup production and mass/length ratios of adult carcasses over the 31-yr study. The generally high proportion of deaths from infectious disease suggests that this factor has contributed to the chronically sluggish growth rate of the California sea otter population .

California↗

USGS1941

Age and growth of the rock bass, Ambloplites rupestris (Rafinesque), in Nebish Lake, Wisconsin

The present study of the age and growth of the Nebish Lake rock bass is another in a series of papers that have been based wholly or in part on materials collected in the course of investigations on the fishes of the lakes of the northeastern highlands, Wisconsin, conducted cooperatively by the Wisconsin Geological and Natural History Survey and the United States Bureau of Fisheries over the periods, 1927-1928 and 1930-1932. The publications have included studies of the age and growth of the rock bass (Wright, 1929), whitefish (Hile and Deason, 1934), yellow perch (Schneberger, 1935), cisco (Hile, 1936a), muskellunge (Schloemer, 1936, 1938), largemouth black bass (Bennett, 1937), common sucker (Spoor, 1938), and smalimouth black bass (Bennett, 1938). A total of five mimeographed reports on the growth of game fish in Wisconsin has been issued by Juday and Schneberger (1930, 1933), Juday and Bennett (1935), and Juday and Schloemer (1936,. 1938). In addition there have appeared two publications on the morphometry of the cisco (Hile 193Gb, 1937), three dealing with the parasites of fishes in the region (Cross 1934, 1935, 1938) and one on the food of fishes (Couey, 1935). A paper by Hile and Juday on the bathymetric distribution of fish will appear simultaneously with the present study of the rock bass. A contribution on the growth of the bluegill by Schloemer will be published in the near future.

Transactions of the Wisconsin Academy of Sciences,↗

USGS1994

Environmental implications of growth rate changes in Montastrea Annularis : Biscayne National Park, Florida

Long-term annual growth rates were determined for 25 Montastrea annularis colonies at eight reef sites in Biscayne National Park, Florida. X-radiographs of slabbed coral cores revealed chronologies that averaged 113.5 years in length with a range of 40 to 242 years. A total of 2,837 annual growth increments were identified and measured. Dating of density bands was verified by visually crossdating fluorescent bands within the coral skeleton. Average accretion rates of individual colonies varied from 5.0 mm·yr −1 in the northernmost sector of the Park to 11.3 mm·yr −1 in the southernmost sector. Long-term growth rates of most corals in this study were greatest prior to about 1950 except for a major, 3–5 year, decline in the growth record of older corals centered around 1878. Waxing and waning coral growth rates are discussed in relation to natural and anthropogenic perturbations that impact this high latitude reef ecosystem. Attention is drawn to nutrients from sewage outfalls as a possible contributing factor to observed growth rate decline since 1950.

Florida↗

USGS2018

2017 Landsat Science Team Summer Meeting Summary

The summer meeting of the U.S. Geological Survey (USGS)-NASA Landsat Science Team (LST) was held June 11-13, 2017, at the USGS’s Earth Resources Observation and Science (EROS) Center near Sioux Falls, SD. This was the final meeting of the Second (2012-2017) LST.1 Frank Kelly [EROS—Center Director] welcomed the attendees and expressed his thanks to the LST members for their contributions. He then introduced video-recorded messages from South Dakota’s U.S. senators, John Thune and Mike Rounds, in which they acknowledged the efforts of the team in advancing the societal impacts of the Landsat Program.

The Earth Observer↗

USGS2023

People need freshwater biodiversity

Freshwater biodiversity, from fish to frogs and microbes to macrophytes, provides a vast array of services to people. Mounting concerns focus on the accelerating pace of biodiversity loss and declining ecological function within freshwater ecosystems that continue to threaten these natural benefits. Here, we catalog nine fundamental ecosystem services that the biotic components of indigenous freshwater biodiversity provide to people, organized into three categories: material (food; health and genetic resources; material goods), non-material (culture; education and science; recreation), and regulating (catchment integrity; climate regulation; water purification and nutrient cycling). If freshwater biodiversity is protected, conserved, and restored in an integrated manner, as well as more broadly appreciated by humanity, it will continue to contribute to human well-being and our sustainable future via this wide range of services and associated nature-based solutions to our sustainable future.

WIREs Water↗

USGS2018

Connectivity of streams and wetlands to downstream waters: An integrated systems framework

Interest in connectivity has increased in the aquatic sciences, partly because of its relevance to the Clean Water Act. This paper has two objectives: (1) provide a framework to understand hydrological, chemical, and biological connectivity, focusing on how headwater streams and wetlands connect to and contribute to rivers; and (2) briefly review methods to quantify hydrological and chemical connectivity. Streams and wetlands affect river structure and function by altering material and biological fluxes to the river; this depends on two factors: (1) functions within streams and wetlands that affect material fluxes; and (2) connectivity (or isolation) from streams and wetlands to rivers that allows (or prevents) material transport between systems. Connectivity can be described in terms of frequency, magnitude, duration, timing, and rate of change. It results from physical characteristics of a system, e.g., climate, soils, geology, topography, and the spatial distribution of aquatic components. Biological connectivity is also affected by traits and behavior of the biota. Connectivity can be altered by human impacts, often in complex ways. Because of variability in these factors, connectivity is not constant but varies over time and space. Connectivity can be quantified with field‐based methods, modeling, and remote sensing. Further studies using these methods are needed to classify and quantify connectivity of aquatic ecosystems and to understand how impacts affect connectivity.

Journal of the American Water Resources Associatio↗

USGS2026

Southeastern Utah Federal lands science needs survey

Evidence-based scientific information can help support defensible decision making in the management of public lands. This report sought to identify current (2024–25) Federal agency research needs in southeastern Utah and to synthesize common management challenges and questions across jurisdictional boundaries. We implemented a science needs assessment focused on lands managed by the Bureau of Land Management (BLM), U.S. Department of Agriculture Forest Service (FS), and National Park Service (NPS) in southeastern Utah—the area delineated by BLM’s Canyon Country District Office, portions of the FS Manti-La Sal National Forest, and Southeast Utah Group NPS units. U.S. Geological Survey (USGS) researchers met with and surveyed BLM, NPS, and FS staff in 2024 and 2025 to understand their science needs and preferred modes of information delivery. The USGS’s approach may be unrepresentative in terms of which topic areas were addressed, but the responses nevertheless highlight challenges and high-priority research areas that could contribute positively to agency decision making. Common management challenges and areas where additional research could be beneficial to land managers include the effects of climate change, recreation effects and visitor behavior, hydrology and hydrologic changes due to anthropogenic pressures, and the capacity for inventory and monitoring across essentially all resource types. Research on site-specific restoration techniques and their outcomes was also a common theme. In this report we discuss ways in which researchers can increase the extent to which their work could be actionable for resource managers and provide suggestions for potential priority research areas for the study region.

Utah↗

USGS2012

On the causes of mid-Pliocene warmth and polar amplification

The mid-Pliocene (~ 3 to 3.3 Ma ago), is a period of sustained global warmth in comparison to the late Quaternary (0 to ~ 1 Ma ago), and has potential to inform predictions of long-term future climate change. However, given that several processes potentially contributed, relatively little is understood about the reasons for the observed warmth, or the associated polar amplification. Here, using a modelling approach and a novel factorisation method, we assess the relative contributions to mid-Pliocene warmth from: elevated CO 2 , lowered orography, and vegetation and ice sheet changes. The results show that on a global scale, the largest contributor to mid-Pliocene warmth is elevated CO 2 . However, in terms of polar amplification, changes to ice sheets contribute significantly in the Southern Hemisphere, and orographic changes contribute significantly in the Northern Hemisphere. We also carry out an energy balance analysis which indicates that that on a global scale, surface albedo and atmospheric emmissivity changes dominate over cloud changes. We investigate the sensitivity of our results to uncertainties in the prescribed CO 2 and orographic changes, to derive uncertainty ranges for the various contributing processes.

Earth and Planetary Science Letters↗

USGS2012

Ecology and conservation biology of avian malaria

Avian malaria is a worldwide mosquito-borne disease caused by Plasmodium parasites. These parasites occur in many avian species but primarily affect passerine birds that have not evolved with the parasite. Host pathogenicity, fitness, and population impacts are poorly understood. In contrast to continental species, introduced avian malaria poses a substantial threat to naive birds on Hawaii, the Galapagos, and other archipelagoes. In Hawaii, transmission is maintained by susceptible native birds, competence and abundance of mosquitoes, and a disease reservoir of chronically infected native birds. Although vector habitat and avian communities determine the geographic distribution of disease, climate drives transmission patterns ranging from continuous high infection in warm lowland forests, seasonal infection in midelevation forests, and disease-free refugia in cool high-elevation forests. Global warming is expected to increase the occurrence, distribution, and intensity of avian malaria across this elevational gradient and threaten high-elevation refugia, which is the key to survival of many susceptible Hawaiian birds. Increased temperatures may have already increased global avian malaria prevalence and contributed to an emergence of disease in New Zealand.

Hawai'i↗

USGS1991

Nature and time course of acclimation to aluminum in juvenile brook trout ( Salvelinus fontinalis ): II. Gill histology

Gill samples from juvenile brook trout ( Salvelinus fontinalis ) acclimated to low-level aluminum at pH 5.2 showed severe damage by day 4, with necrosis and fusion of secondary lamellae and hyperplasia and hypertrophy of mucous cells. Over the following 20&ensp;d, there was a continual process of repair with proliferation and hypertrophy of mucous cells. Qualitative analysis of gill samples plus physiology and mortality data collected in a companion study indicated progressive development (by day 10 onward) of increasing acclimation to Al. Quantitative analysis of gill samples on day 13 showed that mucous cell volume density had tripled and mucous cell area had doubled in Al-exposed fish compared with control fish. A lamellar fusion index showed evidence of fusion in Al-exposed fish by day 4 with recovery to nearly control levels by day 13. Physiological disturbances appear to be directly related to the histological changes observed in the gill epithelium. At the cellular level, changes in either mucous cell production and secretion or changes in mucus chemistry contribute, in part, to acclimation to Al.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2025

Assessing the effect of coral reef restoration location on coastal flood hazard along the San Juan Coastline, Puerto Rico

Coastal resilience has become a pressing global issue due to the growing vulnerability of coastlines to the effects of climate change. Nature-based solutions have emerged as a promising approach to coastal protection to not only enhance coastal resilience, but also restore critical ecosystems. Coral reef restoration has the potential to provide ecosystem services benefits; however, there are still key uncertainties in linking restoration design to reductions in coastal flood hazard under current and future climate conditions. In this study, we applied one-dimensional and two-dimensional numerical coastal engineering models, calibrated and validated using field data, to evaluate the effectiveness of coral restoration scenarios on coastal waves, water levels, and flooding along the coast of San Juan, Puerto Rico, U.S.A. Model results indicate a small reduction in maximum water levels under the proposed restoration scenarios. This underscores the importance of these endeavors, not only for ecological preservation but also for preventing further reef deterioration. Such preservation is essential for mitigating the increased coastal risks anticipated in the future. Results from this study provide information to guide policymakers and coastal managers in making informed decisions on viable restoration project design options. By systematically evaluating how restoration location impacts coastal flood hazards, communities can develop and implement proactive strategies to mitigate flood-related risk. In addition, by restoring coral reefs, communities can contribute to environmental preservation while ensuring sustainable development and protection of coastal environments.

Puerto Rico, San Juan coastline↗

USGS2007

The science and practice of environmental flows and the role of hydrogeologists

Conflicts between ecosystems and human needs for fresh water are increasing. The purpose of this paper is to raise awareness in the hydrogeologic community of environmental flows (EFs) and to address the major challenges involved in their protection. Ground water is a key component of EFs, and therefore hydrogeologists are called upon to get involved in the ongoing debates about maintaining healthy riverine ecosystems. Promising opportunities for achieving EFs in both underallocated and overallocated basins as well as new methods for protecting fresh water ecosystems developed in different countries are outlined. EF protection measures include private water trusts, "upside-down instream flow water rights," the "public trust" doctrine, and water markets, among other measures. A number of knowledge gaps are identified, to which hydrogeologists could contribute, such as our rudimentary knowledge about ground water-dependent ecosystems, aspects of stream-aquifer interactions, and the impacts of land-use changes. The values that society places on the different uses of water ultimately determine where the water is allocated. EF requirements can be legitimately recognized and addressed by basing the environmental needs of hydrologic systems on robust science, focusing on increasing the productivity of water use, engaging society in understanding the benefits and costs of decisions that affect ecosystems, and taking advantage of various opportunities for achieving EF goals. ?? 2007 National Ground Water Association.

Ground Water↗

USGS2008

An exploration of Bureau of Reclamation approaches for managing conflict over diverging science

As a major institutional agent supplying Western water resources, the Bureau of Reclamation (Reclamation) provides important leadership, technical, and financial resources in water management, serving as the West's "water broker" (Bowersox 2000; Pisani 2003). In recent years, growing numbers of constituencies using water and the over-allocation of water resources have contributed to conflict over the resource in the American West (National Research Council 2004). Although the conflicts arise from many sources, one common theme is that Reclamation managers often must make decisions about water use and allocation when scientific studies provide uncertain or competing recommendations. We conducted a preliminary study of Reclamation water managers and water scientists to try to understand the approaches or techniques they use or consider useful for dealing with scientific conflicts over water allocation and how these compare to techniques found in the relevant literature. We report the results of (1) an electronic survey of Reclamation senior managers and (2) a panel discussion amongst Reclamation senior managers as to the current institutional capabilities for managing diverging scientific findings in water dispute resolution processes. We conclude with a discussion of the strengths and weaknesses of the different tools and techniques managers reported in the survey and in the panel discussion.

Technical Memorandum↗

USGS2025

Applying U.S. Geological Survey science to understand effects to water supply in the Upper Colorado River Basin

Introduction The Colorado River Basin is a vital source of water to more than 40 million people in the Western United States and Mexico, including in major cities like Denver, Las Vegas, Phoenix, Tucson, Los Angeles, and San Diego, and supports irrigation for about 16,000 square kilometers of agricultural land. Since 2000, the southwestern United States has been unusually dry due to low precipitation and warm air temperatures, contributing to extreme water level declines of the two large reservoirs on the Colorado River, Lake Mead and Lake Powell. In 2021, these reservoirs reached their lowest levels on record, resulting in unprecedented restrictions on water usage in the basin. As much as 90 percent of the annual runoff in the Colorado River Basin originates in areas upstream from Lake Powell (hereafter, these areas will be referred to collectively as the “Upper Basin”). Consequently, understanding the processes that can affect water supply in the Upper Basin could be crucial for supporting human, agricultural, and ecological needs across a large spatial scale. The U.S. Geological Survey (USGS) does a wide variety of science in cooperation with resource managers, municipalities, tribes, and local, State, and Federal agencies to help improve understanding of processes, such as streamflow and water quality, potentially affecting water supply in the Upper Basin. This fact sheet describes three key potential factors affecting water supply in the Upper Basin—snow processes and water storage, wildfire and basin hydrology, and salinity concentrations and water quality—and highlights associated USGS research activities in the basin.

Arizona, Colorado, New Mexico, Utah, Wyoming↗

USGS2019

Characterizing 12 years of wildland fire science at the U.S. Geological Survey: Wildland Fire Science Publications, 2006–17

Wildland fire characteristics, such as area burned, number of large fires, burn intensity, and fire season duration, have increased steadily over the past 30 years, resulting in substantial increases in the costs of suppressing fires and managing damages from wildland fire events (National Academies of Sciences, Engineering, and Medicine, 2017). Wildland fire management could benefit from sound decision making based on reliable scientific information. Fire scientists produce data, tools, and information to support fire and land management decision making. With ever-changing land use scenarios, environmental conditions, and emerging technological capabilities, new assessments and studies are continually needed. Established by Congress in 1879, the U.S. Geological Survey (USGS) is the primary science branch of the Department of the Interior (DOI), which manages more than 400 million acres of public lands in the United States. The USGS has more than 100 scientists across seven Mission Areas that help address the wildland fire science needs of DOI bureaus and their stakeholders. The diverse expertise of these scientists allows them to address complex interdisciplinary challenges. In this report, we identify and characterize scientific literature produced by USGS scientists during 2006–17 that addresses topics associated with wildland fire science. Our goals were to (1) make the most complete list possible of product citations readily available in an organized format, and (2) use bibliometric analysis approaches to highlight the productivity of USGS scientists and the impact of contributions that the Bureau has provided to the scientific, land management, and fire management communities.

Open-File Report↗

USGS2025

Landscape transcriptomic analysis detects thermal stress responses and potential adaptive variation in wild brook trout (Salvelinus fontinalis) during successive heatwaves

Extreme weather events, such as heatwaves, are becoming more frequent and intense as a result of climate change. Critically, such extreme weather events can be more important drivers of extirpation and selection than changes in annual or seasonal averages and they pose a particularly large threat to poikilothermic organisms. In this study, we evaluated the transcriptomic response of a coldwater adapted fish species, the eastern brook trout ( Salvelinus fontinalis ), to two successive heatwaves during July and August 2022. We sampled brook trout at eight time points from four streams ( N = 116 fish), sequenced mRNA from gill samples using TagSeq, and quantified expression levels of 32,670 unique transcripts. Multivariate analyses found that overall expression patterns in response to water temperature change were similar among streams. These analyses further detected groups of genes involved in immune response and oxygen carrier activity that were upregulated and downregulated respectively at higher water temperatures. We also detected 43 genes that were differentially expressed at different time points and followed the same expression pattern during the two heatwaves. Of these genes, 42 covaried with water temperature and most (27, 62.8 %) exhibited responses that varied by stream. Some of the differentially expressed genes, including heat shock proteins and cold-inducible RNA binding proteins, have been widely linked to temperature responses in experimental studies, whereas other genes we identified have functions that have not been well-studied in relationship to temperature or have unknown functions. This study shows the utility of landscape transcriptomic approaches to identify important biological processes governing wild organismal responses to short-term stressors. The results of this study can guide future investigations to identify phenotypic and genetic diversity that contribute to adaptive responses to heatwaves and improve predictions of how populations will respond to future climate change.

Pennsylvania↗

USGS2017

Flowering phenology shifts in response to biodiversity loss

Observational studies and experimental evidence agree that rising global temperatures have altered plant phenology—the timing of life events, such as flowering, germination, and leaf-out. Other large-scale global environmental changes, such as nitrogen deposition and altered precipitation regimes, have also been linked to changes in flowering times. Despite our increased understanding of how abiotic factors influence plant phenology, we know very little about how biotic interactions can affect flowering times, a significant knowledge gap given ongoing human-caused alteration of biodiversity and plant community structure at the global scale. We experimentally manipulated plant diversity in a California serpentine grassland and found that many plant species flowered earlier in response to reductions in diversity, with peak flowering date advancing an average of 0.6 days per species lost. These changes in phenology were mediated by the effects of plant diversity on soil surface temperature, available soil N, and soil moisture. Peak flowering dates were also more dispersed among species in high-diversity plots than expected based on monocultures. Our findings illustrate that shifts in plant species composition and diversity can alter the timing and distribution of flowering events, and that these changes to phenology are similar in magnitude to effects induced by climate change. Declining diversity could thus contribute to or exacerbate phenological changes attributed to rising global temperatures.

Proceedings of the National Academy of Sciences↗