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USGS2010

Evaluation of methods for identifying spawning sites and habitat selection for alosines

Characterization of riverine spawning habitat is important for the management and restoration of anadromous alosines. We examined the relative effectiveness of oblique plankton tows and spawning pads for collecting the eggs of American shad Alosa sapidissima , hickory shad A. mediocris , and “river herring” (a collective term for alewife A. pseudoharengus and blueback herring A. aestivalis ) in the Roanoke River, North Carolina. Relatively nonadhesive American shad eggs were only collected by plankton tows, whereas semiadhesive hickory shad and river herring eggs were collected by both methods. Compared with spawning pads, oblique plankton tows had higher probabilities of collecting eggs and led to the identification of longer spawning periods. In assumed spawning areas, twice-weekly plankton sampling for 15 min throughout the spawning season had a 95% or greater probability of collecting at least one egg for all alosines; however, the probabilities were lower in areas with more limited spawning. Comparisons of plankton tows, spawning pads, and two other methods of identifying spawning habitat (direct observation of spawning and examination of female histology) suggested differences in effectiveness and efficiency. Riverwide information on spawning sites and timing for all alosines is most efficiently obtained by plankton sampling. Spawning pads and direct observations of spawning are the best ways to determine microhabitat selectivity for appropriate species, especially when spawning sites have previously been identified. Histological examination can help determine primary spawning sites but is most useful when information on reproductive biology and spawning periodicity is also desired. The target species, riverine habitat conditions, and research goals should be considered when selecting methods with which to evaluate alosine spawning habitat.

North American Journal of Fisheries Management↗

USGS2007

Tag return models allowing for harvest and catch and release: Evidence of environmental and management impacts on striped bass fishing and natural mortality rates

Catch-and-release fisheries have become very important in the management of overexploited recreational fish stocks. Tag return studies, where the tag is removed regardless of fish disposition, have been used to assess the effectiveness of restoration efforts for these fisheries. We extend the instantaneous rate formulation of tag return models to allow for catch and release as well as harvest. The key point of our methods is that, given an estimate of the tag reporting rate, the fishing mortality rate (F) is separated into two components: the mortality on harvested fish and the "mortality" on tags (because the lags are removed) of fish released alive. The total fishing mortality rate for untagged fish is the sum of the Fs due to harvest and hooking mortality suffered by fish released alive. Natural mortality rates can also be estimated. Both age-independent models and age-dependent models are constructed, and the age-dependent models are illustrated by application to data from a study of striped bass Morone saxatilis in Chesapeake Bay from 1991 to 2003 by the Maryland Department of Natural Resources. By fitting models of the natural mortality rate with limited age and year dependence, we demonstrate an overall decrease in natural mortality rates as fish age and provide evidence of an increase in natural mortality beginning in the late 1990s, when an outbreak of the disease mycobacteriosis is thought to have begun. Our results indicate that fishing mortality is age dependent; selectivity increases up to age 6, when fish appear to be fully recruited to the fishery. There is also evidence of an increase in fishing mortality since 1995, when regulations were relaxed. ?? Copyright by the American Fisheries Society 2007.

North American Journal of Fisheries Management↗

USGS2019

In situ evaluation of benthic suffocation methods for suppression of invasive Lake Trout embryos in Yellowstone Lake

Suppression of invasive Lake Trout Salvelinus namaycush is an important management tool to use in native fish and ecosystem conservation throughout the U.S. Intermountain West. Lake Trout suppression, primarily by gill netting, has been ongoing in Yellowstone Lake, Yellowstone National Park, Wyoming, since 1995. Additional methods that cause mortality of Lake Trout embryos could be used simultaneously with gill netting to enhance suppression. Our objective was to evaluate the in-situ efficacy of two benthic suffocation methods—tarping with gas-impermeable tarps and Lake Trout carcass deposition to increase the mortality of Lake Trout embryos. Tarping did not increase embryo mortality; mean control mortality was 21 ± 1.9% (mean ± SE), and mean tarp-treatment mortality was 20 ± 2.9%. Lake Trout carcass deposition caused 98 ± 1.2% mean mortality of embryos at the substrate surface and 100 ± 0.1% mean mortality of embryos 20 cm below the substrate surface. Hypoxic conditions in the carcass treatments were probably the cause of the high embryo mortality; dissolved oxygen concentrations at the substrate surface declined from 7.74 to 0.06 mg/L when carcasses remained on the treatment locations. The deposition of Lake Trout carcasses shows potential to be an additional suppression method that can induce mortality in Lake Trout embryos through benthic suffocation and could be implemented at Lake Trout spawning sites in Yellowstone Lake.

Wyoming↗

USGS2016

Simulation modeling to explore the effects of length-based harvest regulations for Ictalurus fisheries

Management of Blue Catfish Ictalurus furcatus and Channel Catfish I. punctatus for trophy production has recently become more common. Typically, trophy management is attempted with length-based regulations that allow for the moderate harvest of small fish but restrict the harvest of larger fish. However, the specific regulations used vary considerably across populations, and no modeling efforts have evaluated their effectiveness. We used simulation modeling to compare total yield, trophy biomass ( B trophy ), and sustainability (spawning potential ratio [SPR] > 0.30) of Blue Catfish and Channel Catfish populations under three scenarios: (1) current regulation (typically a length-based trophy regulation), (2) the best-performing minimum length regulation (MLR best ), and (3) the best-performing length-based trophy catfish regulation (LTR best ; “best performing” was defined as the regulation that maximized yield, B trophy , and sustainability). The B trophy produced did not differ among the three scenarios. For each fishery, the MLR best and LTR best produced greater yield (>22% more) than the current regulation and maintained sustainability at higher finite exploitation rates (>0.30) than the current regulation. The MLR best and LTR best produced similar yields and SPRs for Channel Catfish and similar yields for Blue Catfish; however, the MLR best for Blue Catfish produced more resilient fisheries (higher SPR) than the LTR best . Overall, the variation in yield, B trophy , and SPR among populations was greater than the variation among regulations applied to any given population, suggesting that population-specific regulations may be preferable to regulations applied to geographic regions. We conclude that LTRs are useful for improving catfish yield and maintaining sustainability without overly restricting harvest but are not effective at increasing the B trophy of catfish.

North American Journal of Fisheries Management↗

USGS2020

Effects of density reduction on age-specific growth of stream-dwelling Brown Trout

Density-dependent growth has been well documented among stream-dwelling Brown Trout Salmo trutta populations. In Spearfish Creek, South Dakota, biomass of adult Brown Trout (>200 mm) is about three times greater than that reported for similar Black Hills streams, whereas the mean length of adult fish is about 30% less. Here, we evaluate density reduction as a management tool for improving the growth rate of stream-dwelling Brown Trout. We compared age-specific growth of wild Brown Trout in stream sections receiving 50% reductions in fish abundance (removal sections) to that of fish in sections containing natural densities (control sections). Annual growth in length and weight of older Brown Trout (age > 2) was greater in removal sections compared to control sections, particularly among fish between 230 and 280 mm TL (ages 3–4). We attribute the growth response to constraints imposed by food availability and the strong feeding hierarchies, characteristic of larger (older) Brown Trout. Data collected from PIT-tagged fish that were recaptured 2 years after fish removal efforts revealed that growth responses owing to density reduction likely did not extend beyond 1 year. Nonetheless, among cohorts that showed improved growth after the first year, we found that their growth advantage was sustained into the second year. At removal sections, age-3 and older Brown Trout that experienced greater growth after 1 year were larger than fish from control sections 2 years later at age 5 and older. Identification of cohort(s) for which density-dependent growth is most pronounced could help to focus efforts on targeted reduction of specific fish sizes/ages that minimize the cost–benefit ratio of fish removal efforts.

South Dakota↗

USGS2021

Flow dynamics influence fish recruitment in hydrologically connected river-reservoir landscapes

Hydrologic processes are often important determinants of successful recruitment of native fishes. However, water management practices can result in abnormal changes in daily and seasonal hydrology patterns. Rarely has fish recruitment across river–reservoir landscapes been considered in relation to flow management, despite the direct relationship between reservoir water management and the resulting upstream and downstream hydrology. We evaluated the relationships between lotic and lentic hydrology and recruitment of two native broadcast-spawning fishes, Freshwater Drum Aplodinotus grunniens and Gizzard Shad Dorosoma cepedianum . Four seasonal periods for each species were identified that related to the species’ spawning biology, from which we derived our remaining hydrology variables. Annual hydrology variables were also considered in our analysis. We developed regression models in conjunction with a model-selection procedure for each species and habitat type based on the catch-curve residuals from fish populations in hydrologically connected river–reservoir systems in the Ozark Highland and Ouachita Mountain ecoregions, USA. Our results indicated that recruitment of reservoir Freshwater Drum was negatively correlated to annual reservoir retention time. In lotic habitats, Freshwater Drum recruitment was positively correlated with prespawn discharge conditions and negatively correlated with annual flow variability. Similarly, riverine Gizzard Shad recruitment was positively correlated to the frequency of high-flow pulses during the spawning period. Our results indicate that releasing reservoir water to best mimic relatively natural flow patterns may benefit some broadcast-spawning species that occupy both lentic and downstream lotic environments, especially during the spring. This information, combined with future efforts on additional spawning guilds, will provide a foundation for developing holistic river–reservoir water-allocation plans.

Missouri, Oklahoma↗

USGS2023

Does release size into net-pens affect survival of captively reared juvenile endangered suckers in Upper Klamath Lake?

Objective High juvenile mortality prevents recruitment into the adult populations of endangered Shortnose Sucker Chasmistes brevirostris and Lost River Sucker Deltistes luxatus in Upper Klamath Lake, Oregon. To address the lack of recruitment, the U.S. Fish and Wildlife Service implemented the Sucker Assisted Rearing Program (SARP). Managers developing the rearing program lack information about how length at release relates to survival. To determine how initial length affects survival of captively reared juvenile suckers, we introduced juvenile suckers from the SARP into three net-pens in Upper Klamath Lake. Methods The juvenile suckers ranged from 102 to 284 mm standard length, and each fish was tagged with a passive integrated transponder (PIT) tag. Fish were monitored continuously by PIT antennas and mortality was inferred when movements ceased. Result Estimated survival over 57 days was high in all net-pens (0.79–1.00) and remained high at two net-pens for 76 and 86 days. Adjusted survival curves resulting from a stratified Cox model with standard length as a covariate, indicated that length positively influenced predicted survival by as much as 41% at one site. During the study, pH and dissolved oxygen regularly exceeded no-effect thresholds at two sites and briefly reached lethal thresholds at the same two sites but did not coincide with the observed mortalities. Slower growth and the lowest survival were observed at the third site, where water quality never exceeded thresholds. Conclusion A larger release size and the location of the net-pen can improve the survivability of juvenile suckers in net-pens in Upper Klamath Lake.

Oregon↗

USGS2020

Influence of population density and length structure on angler catch rate in kokanee fisheries

Management agencies are often charged with providing fisheries that lead to angler participation. Catch rate is one of the primary drivers of angler participation but can be influenced by a suite of factors, including population structure (e.g., density and size structure). The complexity of understanding how population structure influences angler catch rate is typified in kokanee Oncorhynchus nerka fisheries. Previous research suggests that angler catch rates of kokanee are positively influenced by fish density and total length. However, that research was based on data collected using size-selective midwater trawls. Due to the potential limitation of previous research, we sought to (1) understand the relative bias of midwater trawls and gill nets for describing the size structure of kokanee available to anglers and (2) re-evaluate the influence of fish density and fish length on angler catch rates in kokanee fisheries. Midwater trawl, gill-net, and creel data were collected on five prominent kokanee fisheries throughout Idaho in 2016 and 2017. Catch composition and percent overlap of midwater trawls, gill nets, and angler-caught fish were compared to understand the efficacy of midwater trawls and gill nets for representing the size structure of kokanee available to anglers. In addition, the influence of kokanee density and length on angler catch rates was evaluated. Midwater trawls primarily sampled small kokanee (<330 mm) and exhibited little overlap with angler-caught fish, whereas gill nets sampled more large fish (>330 mm) and exhibited higher overlap with angler-caught fish when compared to midwater trawls. Fish length was not positively associated with angler catch rates. However, fish density exhibited a positive relationship with angler catch rates. Our results highlight the importance of gear choice for understanding how kokanee populations function and elucidate the tradeoffs associated with population density, fish length, and resulting kokanee fisheries.

Idaho↗

USGS2019

A statewide evaluation of Florida Bass genetic introgression in Tennessee

Largemouth Bass (Micropterus salmoides) are one of the most popular freshwater sport fish in the United States and managers in southeastern states have stocked the Florida Bass (M. s. floridanus) subspecies outside of its natural range to increase size structure of existing Largemouth Bass populations. In Tennessee, fisheries for Largemouth Bass are concentrated in reservoirs of the Cumberland and Tennessee River systems; however, Florida Bass stockings have to date been restricted to two reservoirs of the Tennessee River and have varied significantly in extent and duration. We quantified levels of genetic admixture between Florida Bass and Largemouth Bass using 38 species-diagnostic single nucleotide polymorphisms for 979 fish sampled from 14 reservoirs from the Cumberland and Tennessee River systems. We tested for differences in genetic admixture across river systems and evaluated the relative importance of fish stockings in explaining observed levels of genetic admixture. Levels of genetic admixture and associated variation was higher in reservoirs of the Tennessee River (range = 6.3 – 30.4 average percent Florida Bass alleles) relative to the Cumberland River (range = 5.7 – 13.4 %), but admixture was not solely related to stocking rates. The highest levels of Florida Bass introgression were detected in Chickamauga Reservoir, the most extensively stocked reservoir in the state. Linear models identified fish stocked as a significant overall predictor of admixture, but we also observed stocked and unstocked reservoirs with similar levels of admixture, suggesting factors other than stocking influence population genetics. Our statewide assessment of reservoir-level patterns of hybridization among black bass was performed prior to the recent expansion of Florida Bass stocking efforts in Tennessee, and thus, represents a baseline for evaluating future stocking.

Tennessee↗

USGS2013

Broad-scale patterns of Brook Trout responses to introduced Brown Trout in New York

Brook Trout Salvelinus fontinalis and Brown Trout Salmo trutta are valuable sport fish that coexist in many parts of the world due to stocking introductions. Causes for the decline of Brook Trout within their native range are not clear but include competition with Brown Trout, habitat alteration, and repetitive stocking practices. New York State contains a large portion of the Brook Trout's native range, where both species are maintained by stocking and other management actions. We used artificial neural network models, regression, principal components analysis, and simulation to evaluate the effects of Brown Trout, environmental conditions, and stocking on the distribution of Brook Trout in the center of their native range. We found evidence for the decline of Brook Trout in the presence of Brown Trout across many watersheds; 22% of sampled reaches where both species were expected to occur contained only Brown Trout. However, a model of the direct relationship between Brook Trout and Brown Trout abundance explained less than 1% of data variation. Ordination showed extensive overlap of Brook Trout and Brown Trout habitat conditions, with only small components of the hypervolume (multidimensional space) being distinctive. Subsequent analysis indicated higher abundances of Brook Trout in highly forested areas, while Brown Trout were more abundant in areas with relatively high proportions of agriculture. Simulation results indicated that direct interactions and habitat conditions were relatively minor factors compared with the effects of repeated stocking of Brown Trout into Brook Trout habitat. Intensive annual stocking of Brown Trout could eliminate resident Brook Trout in less than a decade. Ecological differences, harvest behavior, and other habitat changes can exacerbate Brook Trout losses. Custom stocking scenarios with Brown Trout introductions at relatively low proportions of resident Brook Trout populations may be able to sustain healthy populations of both species within their present range.

New York↗

USGS2023

Estimates of predator densities using mobile DIDSON surveys: Implications for survival of Central Valley Chinook Salmon

The Sacramento–San Joaquin Delta (hereafter, “the Delta”) is one of the estuaries with the most invasive species in the world, and nonnative predators may be a major factor in the observed decline of Central Valley Chinook Salmon Oncorhynchus tshawytscha over recent decades. In order for managers to take actions that might reduce predation-related mortality for these ecologically, culturally, and economically valuable fish, it is important to understand the factors influencing the distribution and abundance of piscivores in the Delta. In this study, we used a dual-frequency identification sonar (i.e., DIDSON) to conduct mobile surveys to quantify the abundances of piscivores in the Delta. We then used these data to identify the habitat features that are correlated with the abundance of piscivores. Prior to conducting the surveys, we used DIDSON data from captured fish to develop an algorithm to distinguish piscivores from nonpiscivores with high confidence (98% accuracy). A generalized linear mixed-effects model fit to these survey data indicated that predator abundances were most associated with areas of increased submerged aquatic vegetation patches, and channels that are straighter, with increased bathymetric complexity. When applied to the entire survey area, this model was successfully able to predict known areas of high predator densities. These results indicate that one approach to reduce predator densities in key locations throughout the Delta, and improve juvenile salmonid outmigration survival, is to reduce the extent of invasive submerged aquatic vegetation. Because experimental predator removals have been largely ineffective in the Delta, efforts to manipulate habitat to discourage nonnative predator recruitment and favor native species recruitment may provide a more effective solution to improve salmonid survival rates.

California↗

USGS2019

Decision analysis for the reintroduction of Bull Trout into the lower Pend Oreille River, Washington

The decision to reintroduce a species can be difficult owing to conflicting opinions and objectives, as well as uncertainty of the outcome. Structured decision making addresses these considerations by identifying realistic fundamental objectives and building achievable management alternatives, within a quantitative modeling framework. The process is driven by participation of stakeholders that represent diverse objectives, policy mandates, and opinions regarding decision alternatives. We applied structured decision making to evaluate reintroduction of Bull Trout Salvelinus confluentus in the lower Pend Oreille River in northeastern Washington State. We engaged stakeholders from Tribal, municipal, county, state and federal agencies to specify fundamental objectives, formulate feasible reintroduction decisions, and conceptualize a modeling framework that includes biological information and stakeholder assumptions. Stakeholders requested iterative decision sets to determine the optimal recipient streams and release strategies. The optimal decision, based on the fundamental objective of maximizing adult abundance at year 10, was artificial propagation of 4500 juvenile Bull Trout coupled with translocation of 25 adult migrants to be reintroduced into a tributary and lake system that produced at least 18% more adult fish relative to alternatives. Sensitivity analyses were robust to the identity of the recipient stream (i.e., Sullivan Lake/Harvey Creek was always the optimal recipient stream) but suggested that maximizing the number of artificially produced juveniles released could produce a similar number of adult Bull Trout as the coupled release strategy. Results also suggested that ensuring fish passage at the Albeni Falls Dam in the mainstem Pend Oreille River could increase the abundance of adult fish. The process followed for this case study can be adapted to similar decisions regarding reintroduction or other translocations of fish in other systems.

Washington↗

USGS2018

Efficacy of using data from angler-caught Burbot to estimate population rate functions

The effective management of a fish population depends on the collection of accurate demographic data from that population. Since demographic data are often expensive and difficult to obtain, developing cost‐effective and efficient collection methods is a high priority. This research evaluates the efficacy of using angler‐supplied data to monitor a nonnative population of Burbot Lota lota . Age and growth estimates were compared between Burbot collected by anglers and those collected in trammel nets from two Wyoming reservoirs. Collection methods produced different length‐frequency distributions, but no difference was observed in age‐frequency distributions. Mean back‐calculated lengths at age revealed that netted Burbot grew faster than angled Burbot in Fontenelle Reservoir. In contrast, angled Burbot grew slightly faster than netted Burbot in Flaming Gorge Reservoir. Von Bertalanffy growth models differed between collection methods, but differences in parameter estimates were minor. Estimates of total annual mortality ( A ) of Burbot in Fontenelle Reservoir were comparable between angled ( A = 35.4%) and netted fish (33.9%); similar results were observed in Flaming Gorge Reservoir for angled (29.3%) and netted fish (30.5%). Beverton–Holt yield‐per‐recruit models were fit using data from both collection methods. Estimated yield differed by less than 15% between data sources and reservoir. Spawning potential ratios indicated that an exploitation rate of 20% would be required to induce recruitment overfishing in either reservoir, regardless of data source. Results of this study suggest that angler‐supplied data are useful for monitoring Burbot population dynamics in Wyoming and may be an option to efficiently monitor other fish populations in North America.

Wyoming↗

USGS2024

Evaluation of techniques for estimating the age and growth of known‐age White Sturgeon

Objective Successful conservation and management of fishes require an understanding of their age and growth. However, methods for estimating the age and growth of long-lived fish species are difficult to validate. The Kootenai River basin has a decades-long mark–recapture program for endangered White Sturgeon Acipenser transmontanus . The mark–recapture history information for White Sturgeon allowed for the evaluation of fin rays for age and growth analysis. Methods Age was estimated from pectoral fin rays of known‐age White Sturgeon ( n = 162) to evaluate ageing accuracy and precision. Lengths were back‐calculated using four models and measurements obtained from two fin ray transects (i.e., lateral and posterior). Result Between-reader agreement for White Sturgeon ages was 58.7%. Consensus age agreement with known ages was poor (30.7%) and decreased with age. Among the four back-calculation models, the Fraser–Lee model provided the lowest root mean square error and percent error. Estimates of mean back-calculated lengths at age derived from the Fraser–Lee model were similar between the two measurement transects. Back-calculated lengths at age were similar to known lengths at age. Conclusion Ageing of White Sturgeon using fin rays was unreliable, and accuracy decreased with fish age. Back-calculated lengths at age were accurate using measurements from fin rays of known-age fish. Length estimates from the two measurement transects were similar when using the Fraser–Lee method, suggesting that they may be used interchangeably.

Idaho, Montana↗

USGS2021

Evaluating fish rescue as a drought adaptation strategy using a life cycle modeling approach for imperiled coho salmon

Projected intensification of drought as a result of climate change may reduce the capacity of streams to rear fish, exacerbating the challenge of recovering salmonid populations listed under the Endangered Species Act. Without management intervention, some stocks will likely go extinct as stream drying and fragmentation reduce juvenile survival to unsustainable levels. To offset drought‐related mortality, fish rescue programs have proliferated, whereby juvenile salmonids are captured and transferred to off‐site rearing facilities. However, the efficacy of this potential conservation tool remains poorly understood. We developed a life cycle model to examine the implications of fish rescue on the abundance of Coho Salmon Oncorhynchus kisutch across serial life stages. The simulation model examines scenarios with varying quantities of rescued fish, time in captivity, drought severity, and reduced smolt‐to‐adult return rates. Our results indicate that fish rescue can increase the abundance of adults and lower extinction risk, particularly for fish held in captivity for a full year. However, fish rescue can also decrease the abundance of adults and increase extinction risk if fish are held only for summer and there is limited winter habitat. We found that when fish rescue did increase returns, it functioned more like a stock enhancement program than a drought mitigation tool and it would likely lead to consecutive generations of captive rearing, which has been shown to have negative effects on fitness. We translated our model into an R Shiny application ( https://shiny.wdfw‐fish.us/CohoPopulationDynamics/ ) that allows users to explore how fish rescue affects Coho Salmon population dynamics through customized parameterization of the model to represent different systems or different assumptions about the effects of fish rescue.

North American Journal of Fisheries Management↗

USGS2019

Energetic status of Alaskan Chinook Salmon: Interpopulation comparisons and predictive modeling using bioelectrical impedance analysis

Adult Pacific Salmon Oncorhynchus spp . undertake energetically demanding migrations wherein they must have adequate energy reserves to survive to spawning locations and reproduce. Proximate analysis provides insight into available energy stores (e.g., lipids), but the ability to non-lethally monitor energetic status may be useful for managers to better understand how energetic status affects salmon populations in light of population declines and threats from climate change and habitat alteration. Chinook Salmon Oncorhynchus tshawytscha (N = 129) were sampled for proximate analysis from four populations in Alaska to examine variation in energetic status pre- and post-spawning migration and to create predictive bioelectrical impedance analysis (BIA) models for this species. We also tested two BIA devices (Q2 and CQR), whether models were generalizable to a con-specific (Chum Salmon Oncorhynchus keta), and the feasibility of integrating BIA into field studies. Populations sampled pre- spawning migration had higher percent lipid (N = 77; mean = 42.57%) than those collected post spawning migration (N = 52; mean = 19.71%). Total percent lipid and water were more accurately predicted from the Q2 device based on BIA measurements (RMSE = 5.33; RMSE = 2.43, respectively), relative to CQR device measurements (RMSE = 6.27; RMSE = 2.66). Between-species (Chinook to Chum RMSE = 19.47; Chum to Chinook RMSE = 7.69) models were less accurate than species specific models created for Chinook and Chum Salmon, therefore single species models should be used. We field-tested the BIA model to predict Chinook Salmon %lipid and %water on a remote Southeast Alaska river. Techniques were quickly taught to field crews and predictions were similar to other pre-spawning migration estimates. Our results indicate that integration of BIA into population monitoring could be a valuable tool to assess spatial and temporal patterns of energetic status of Chinook Salmon.

Alaska↗

USGS2023

Water and endangered fish in the Klamath River Basin: Do Upper Klamath Lake surface elevation and water quality affect adult Lost River and Shortnose Sucker survival?

In the western United States, water allocation decisions often incorporate the needs of endangered fish. In the Klamath River basin, an understanding of temporal variation in annual survival rates of Shortnose Suckers Chasmistes brevirostris and Lost River Suckers Deltistes luxatus and their relation to environmental drivers is critical to water management and sucker recovery. Extinction risk is high for these fish because most individuals in the populations are approaching their maximum life span and recruitment of new fish into the adult populations has never exceeded mortality losses in the past 22 years. We used a time series of mark–recapture data from the years 1999–2021 to analyze the relationship between lake level, water quality covariates, and survival of adult Shortnose Suckers and two spawning populations of Lost River Suckers in Upper Klamath Lake, Oregon. We compared competing model hypotheses in a maximum likelihood framework using Akaike's information criterion and then ran the top environmental covariates in a Bayesian framework to estimate how much of the variation in survival was explained by these covariates as compared to random variation. The complementary analyses found almost unequivocal support for our base model without environmental covariates. Estimated adult sucker survival was high across the time series and consistent with sucker life history (mean annual survival = 0.82–0.91). This suggests that adult suckers were generally robust to interannual variation in lake levels as well as consistently poor water quality within the years of our data set. Recovery time is limited, as a declining survival trend for adult suckers in recent years may be due to the onset of senescence. The successful recovery of suckers in Upper Klamath Lake may rely on shifting research from the causes of adult mortality and its relationship with lake surface elevation to the causes of poor recruitment into adult populations.

California, Oregon↗

USGS2021

Second fin ray shows promise for estimating ages of juvenile but not adult Lake Sturgeon

The first marginal pectoral fin ray (fin spine) is the most common structure used for estimating the age of sturgeons, including Lake Sturgeon Acipenser fulvescens . However, conflicting results from studies on the effects of fin spine removal have made some managers hesitant about the practice. We investigated whether the second pectoral fin ray, which can be removed in a less invasive procedure, could be used for estimating ages of Lake Sturgeon. Ages estimated from fin spine and second fin ray samples were compared for 53 wild (470 to 1,981 mm TL) and 16 stocked, known-age (ages 8–18) Lake Sturgeon. Mean coefficient of variation for all samples was 12.4% for the fin spine and 17.5% for the second fin ray. In known-age fish, 17% of estimated ages for the fin spine and the second fin ray matched true age. For the remaining estimates, the difference between the second fin ray and true age was greater than the difference between the fin spine and true age ( P < 0.05, Wilcoxon’s signed rank test). In juvenile fish ( n = 24), 75% of ages estimated from fin spines and second fin rays were within ±4 annuli, which was similar to differences in reader agreement for the same fin spine. Age estimates for adult Lake Sturgeon ( n = 45) were less when using the second fin ray relative to the fin spine (up to –34 years). Additionally, poor annulus clarity was observed in >70% of the second fin rays sampled from adult fish. Our results suggest that the second fin ray does not provide reliable age estimates for adult Lake Sturgeon but may have some utility for estimating age of juvenile Lake Sturgeon. Additional research with a larger sample size would be required to provide more conclusive results.

Vermont, Wisconsin↗