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At least 289 records · Page 16Linked to original sources
USGS2017

Virginia flow-ecology modeling results—An initial assessment of flow reduction effects on aquatic biota

Background The U.S. Geological Survey (USGS), in cooperation with the Virginia Department of Environmental Quality (DEQ), reviewed a previously compiled set of linear regression models to assess their utility in defining the response of the aquatic biological community to streamflow depletion. As part of the 2012 Virginia Healthy Watersheds Initiative (HWI) study conducted by Tetra Tech, Inc., for the U.S. Environmental Protection Agency (EPA) and Virginia DEQ, a database with computed values of 72 hydrologic metrics, or indicators of hydrologic alteration (IHA), 37 fish metrics, and 64 benthic invertebrate metrics was compiled and quality assured. Hydrologic alteration was represented by simulation of streamflow record for a pre-water-withdrawal condition (baseline) without dams or developed land, compared to the simulated recent-flow condition (2008 withdrawal simulation) including dams and altered landscape to calculate a percent alteration of flow. Biological samples representing the existing populations represent a range of alteration in the biological community today. For this study, all 72 IHA metrics, which included more than 7,272 linear regression models, were considered. This extensive dataset provided the opportunity for hypothesis testing and prioritization of flow-ecology relations that have the potential to explain the effect(s) of hydrologic alteration on biological metrics in Virginia streams.

Virginia↗
USGS2011

Risk assessment, eradication, and biological control: Global efforts to limit Australian acacia invasions

Aim Many Australian Acacia species have been planted around the world, some are highly valued, some are invasive, and some are both highly valued and invasive. We review global efforts to minimize the risk and limit the impact of invasions in this widely used plant group. Location Global. Methods Using information from literature sources, knowledge and experience of the authors, and the responses from a questionnaire sent to experts around the world, we reviewed: (1) a generalized life cycle of Australian acacias and how to control each life stage, (2) different management approaches and (3) what is required to help limit or prevent invasions. Results Relatively few Australian acacias have been introduced in large numbers, but all species with a long and extensive history of planting have become invasive somewhere. Australian acacias, as a group, have a high risk of becoming invasive and causing significant impacts as determined by existing assessment schemes. Moreover, in most situations, long‐lived seed banks mean it is very difficult to control established infestations. Control has focused almost exclusively on widespread invaders, and eradication has rarely been attempted. Classical biological control is being used in South Africa with increasing success. Main conclusions A greater emphasis on pro‐active rather than reactive management is required given the difficulties managing established invasions of Australian acacias. Adverse effects of proposed new introductions can be minimized by conducting detailed risk assessments in advance, planning for on‐going monitoring and management, and ensuring resources are in place for long‐term mitigation. Benign alternatives (e.g. sterile hybrids) could be developed to replace existing utilized taxa. Eradication should be set as a management goal more often to reduce the invasion debt. Introducing classical biological control agents that have a successful track‐record in South Africa to other regions and identifying new agents (notably vegetative feeders) can help mitigate existing widespread invasions. Trans‐boundary sharing of information will assist efforts to limit future invasions, in particular, management strategies need to be better evaluated, monitored, published and publicised so that global best‐practice procedures can be developed.

Diversity and Distributions↗
USGS1989

Regional lists of plant species that occur in wetlands: data base user's guide

The Data Base List of Plant Species that Occur in Wetlands (LIST) currently contains records for 6,728 plant species. Each record provides information on nomenclature, plant characteristics and lifeforms, distribution, and frequency of occurrence in wetlands. The List of Plant Species that Occur in Wetlands, developed to supplement the U.S. Fish and Wildlife Service's Classification of Wetlands and Deepwater Habitats of the United States (Cowardin et al. 1979), underwent an intensive review by field botanists across the country. This review was coordinated by national and regional interagency wetland plant list review panels composed of representatives from the U. S. Fish and Wildlife Service, U. S. Army Corps of Engineers, Soil Conservation Service, and the Environmental Protection Agency. Initial and updated versions of the Data Base List of Plant Species that Occur in Wetlands are available in hardcopy (Reed 1986, 1988). Regional lists are available as U.S. Fish and Wildlife Service Biological Report Series 88(26.126.13). State lists are available as National Ecology Research Center Report Series 88(18.01-18.50). The computerized data base tracks and documents indicator assignments made by regional interagency review panels and facilitates generation of reports. This user's guide describes the format and contents of the LIST Data Base. The Data Base is available on 5-1/4" floppy disks in ASCII format for use with a data base management system on an IBM PC/XT/AT compatible computer. The LIST Data Base was developed using the QUICKTEXT Data Base Management System (Osborn and Strong 1984). Use of QUICKTEXT with the LIST Data Base is strongly recommended. Instructions for loading LIST into QUICKTEXT are included in this user's guide. Other data base management systems capable of handling variable length fields can be used by individuals familiar with these software packages. LIST distribution disks are available for 13 regions (Table 1). QUICKTEXT (course QT100--Data Base Management Techniques) and regional subsets of the LIST Data Base (distributed as self-tutorial courses, Table 1) are available through the Office of Conference Services, Colorado State University.

Report↗
USGS1997

Zinc hazards to plants and animals with emphasis on fishery and wildlife resources

Ecological and toxicological aspects of zinc in the environment are reviewed with emphasis on natural resources. Subtopics include sources and uses; chemical and biochemical properties; carcinogenicity, mutagenicity, teratogenicity; background concentrations in biological and nonbiological compartments; effects of zinc deficiency; toxic and sublethal effects on terrestrial plants and invertebrates, aquatic organisms, birds, and mammals; and recommendations for the protection of sensitive resources.

Book chapter↗
USGS2003

Western crevice and cavity-roosting bats

Among the 45 species of bats that occur in the United States (U.S.), 34 species regularly occur in western regions of the country. Many of these “western” species choose roost sites in crevices or cavities. Herein we provide an introduction to the biology of bats that roost in cavities and crevices and assess the challenges and opportunities associated with monitoring their populations. We reviewed recent studies and examined the U.S. Geological Survey Bat Population Database (BPD) for records of western bats using crevice and cavity roosts. We found records of 25 species of western bats that use crevice or cavity roosts for at least part of their annual cycle. There were relatively few (n = 92) observations or counts for these species in the BPD, representing only 6% of the observations in the database. This paucity of records likely reflects the difficulty of observing bats in such situations rather than actual use. We found no long-term data adequate for population trend analysis among this group of bats. Since the development of miniaturized radio transmitters, our knowledge about bats that roost in cavities and crevices has increased. Future challenges associated with monitoring these species will include understanding variability in the types of roosts used as well as the roost-switching behavior exhibited by many species.

Report↗
USGS2003

Western crevice and cavity-roosting bats

Among the 45 species of bats that occur in the United States (U.S.), 34 species regularly occur in western regions of the country. Many of these “western” species choose roost sites in crevices or cavities. Herein we provide an introduction to the biology of bats that roost in cavities and crevices and assess the challenges and opportunities associated with monitoring their populations. We reviewed recent studies and examined the U.S. Geological Survey Bat Population Database (BPD) for records of western bats using crevice and cavity roosts. We found records of 25 species of western bats that use crevice or cavity roosts for at least part of their annual cycle. There were relatively few (n = 92) observations or counts for these species in the BPD, representing only 6% of the observations in the database. This paucity of records likely reflects the difficulty of observing bats in such situations rather than actual use. We found no long-term data adequate for population trend analysis among this group of bats. Since the development of miniaturized radio transmitters, our knowledge about bats that roost in cavities and crevices has increased. Future challenges associated with monitoring these species will include understanding variability in the types of roosts used as well as the roost-switching behavior exhibited by many species.

Book chapter↗
USGS2016

Spatially explicit modeling in ecology: A review

The use of spatially explicit models (SEMs) in ecology has grown enormously in the past two decades. One major advancement has been that fine-scale details of landscapes, and of spatially dependent biological processes, such as dispersal and invasion, can now be simulated with great precision, due to improvements in computer technology. Many areas of modeling have shifted toward a focus on capturing these fine-scale details, to improve mechanistic understanding of ecosystems. However, spatially implicit models (SIMs) have played a dominant role in ecology, and arguments have been made that SIMs, which account for the effects of space without specifying spatial positions, have an advantage of being simpler and more broadly applicable, perhaps contributing more to understanding. We address this debate by comparing SEMs and SIMs in examples from the past few decades of modeling research. We argue that, although SIMs have been the dominant approach in the incorporation of space in theoretical ecology, SEMs have unique advantages for addressing pragmatic questions concerning species populations or communities in specific places, because local conditions, such as spatial heterogeneities, organism behaviors, and other contingencies, produce dynamics and patterns that usually cannot be incorporated into simpler SIMs. SEMs are also able to describe mechanisms at the local scale that can create amplifying positive feedbacks at that scale, creating emergent patterns at larger scales, and therefore are important to basic ecological theory. We review the use of SEMs at the level of populations, interacting populations, food webs, and ecosystems and argue that SEMs are not only essential in pragmatic issues, but must play a role in the understanding of causal relationships on landscapes.

Ecosystems↗
USGS2020

Climate dipoles as continental drivers of plant and animal populations

Ecological processes, such as migration and phenology, are strongly influenced by climate variability. Studying these processes often relies on associating observations of animals and plants with climate variability indices, such as the El Niño–Southern Oscillation. A characteristic of climate indices is the simultaneous emergence of opposite extremes of temperature and precipitation across continental scales, known as climate dipoles. The role of climate dipoles in shaping ecological and evolutionary processes has been largely overlooked. We review emerging evidence that climate dipoles can entrain species dynamics, and offer a framework for identifying ecological dipoles using broad-scale biological data. Given future changes in climatic and atmospheric processes, climate and ecological dipoles will likely shift in their intensity, distribution, and timing.

Trends in Ecology and Evolution↗
USGS1998

History and tradition, or contemporary ornithology? Why ornithological journals should not have bird names

Ask any non-ornithologist to predict the prestige of the following journals, based on the name alone: American Birds, Auk, Bluebird, Condor, Emu, Forktail, Gerfaut, Ibis, Journal of Avian Biology, and Journal of Field Ornithology . The results always will be that the first one and the last two are placed in one category, and the blizzard of bird-named journals in another, lower category. When that same non-ornithologist is called upon to evaluate the publication records of ornithologists, those with important papers in bird-named journals likely will suffer lower rankings. If lucky, an ornithologist under review will receive support from an internationally distinguished ornithological colleague who will take explicit pains to argue that publication in The Auk is a meritorious professional accomplishment. Such arguments, however, may not counteract the damage of a single referee's sneering at the names of the journals in which a bird biologist has chosen to publish. One cannot overstate the importance of the serendipitous collection of peer reviews that determines whether ornithologists get and then keep their first academic jobs, receive tenure, are promoted, are evaluated fairly, and, most important, achieve and maintain the respect of colleagues in other biological disciplines.

The Auk↗
USGS2020

Potential changes to the biology and challenges to the management of invasive sea lamprey Petromyzon marinus in the Laurentian Great Lakes due to climate change

Control programs are implemented to mitigate the damage caused by invasive species worldwide. In the highly invaded Great Lakes, the climate is expected to become warmer with more extreme weather and variable precipitation, resulting in shorter iced‐over periods and variable tributary flows as well as changes to pH and river hydrology and hydrogeomorphology. We review how climate change influences physiology, behavior, and demography of a damaging invasive species, sea lamprey ( Petromyzon marinus ), in the Great Lakes, and the consequences for sea lamprey control efforts. Sea lamprey control relies on surveys to monitor abundance of larval sea lamprey in Great Lakes tributaries. The abundance of parasitic, juvenile sea lampreys in the lakes is calculated by surveying wounding rates on lake trout ( Salvelinus namaycush ), and trap surveys are used to enumerate adult spawning runs. Chemical control using lampricides (i.e., lamprey pesticides) to target larval sea lamprey and barriers to prevent adult lamprey from reaching spawning grounds are the most important tools used for sea lamprey population control. We describe how climate change could affect larval survival in rivers, growth and maturation in lakes, phenology and the spawning migration as adults return to rivers, and the overall abundance and distribution of sea lamprey in the Great Lakes. Our review suggests that Great Lakes sea lamprey may benefit from climate change with longer growing seasons, more rapid growth, and greater access to spawning habitat, but uncertainties remain about the future availability and suitability of larval habitats. Consideration of the biology of invasive species and adaptation of the timing, intensity, and frequency of control efforts is critical to the management of biological invasions in a changing world, such as sea lamprey in the Great Lakes.

Great Lakes↗
USGS2019

Life history, genetics, range expansion and new frontiers of the lionfish (Pterois volitans, Perciformes: Pteroidae) in Latin America

Pterois volitans (lionfish) is a midsize predatory fish commonly found in waters of the western Pacific and Indian Ocean. The species was first documented in Dania Beach, Florida (northwestern Caribbean) in 1985. Since that time the species has expanded its range rapidly to the Northwestern Atlantic Ocean, Gulf of Mexico, and Caribbean Sea. Since its introduction P. volitans has changed community structure and biodiversity of Caribbean reef communities and other coastal tropical ecosystems. Continuous introductions (accidental or intentional), limited natural predators, naïve-range prey behavior, high predation rates on competitors, continuous reproduction, and an extended period of larval dispersal have been the keys for successful invasion and rapid range extension of P. volitans . This invasion has become so severe that it has been recognized as one of the world’s top conservation issues. Here, we review the life history, behavior, and historical and contemporary genetic patterns that facilitate expansion and the colonization process. A greater understanding of lionfish biology, ecology, and the changes related to its present condition as a super-invader could improve current and future management strategies and new detection and response methodologies. We also examine new invasion frontiers that this species has the potential to colonize such as the eastern Pacific. This information will provide managers, the scientific community, and the civil society better tools for eradication, control and management of future invasions of this and other invasive species.

Caribbean Sea, Latin America↗
USGS2020

Timescales and processes of methane hydrate formation and breakdown, with application to geologic systems

Gas hydrate is an ice-like form of water and low molecular weight gas stable at temperatures of roughly -10ºC to 25ºC and pressures of ~3 to 30 MPa in geologic systems. Natural gas hydrates sequester an estimated one-sixth of Earth’s methane and are found primarily in deepwater marine sediments on continental margins, but also in permafrost areas and under continental ice sheets. When gas hydrate is removed from its stability field, its breakdown has implications for the global carbon cycle, ocean chemistry, marine geohazards, and interactions between the geosphere and the ocean-atmosphere system. Gas hydrate breakdown can also be artificially driven as a component of studies assessing the resource potential of these deposits. Furthermore, geologic processes and perturbations to the ocean-atmosphere system (e.g., warming temperatures) can cause not only dissociation, but also more widespread dissolution of hydrate or even formation of new hydrate in reservoirs. Linkages between gas hydrate and disparate aspects of Earth’s near-surface physical, chemical, and biological systems render an assessment of the rates and processes affecting the persistence of gas hydrate an appropriate Centennial Grand Challenge. This paper reviews the thermodynamic controls on methane hydrate stability and then describes the relative importance of kinetic, mass transfer, and heat transfer processes in the formation and breakdown (dissociation and dissolution) of gas hydrate. Results from numerical modeling, laboratory, and some fields studies are used to summarize the rates of hydrate formation and breakdown, followed by an extensive treatment of hydrate dynamics in marine and cryospheric gas hydrate systems.

Journal of Geophysical Research-Solid Earth↗
USGS1997

Summary of information on aquatic biota and their habitats in the Willamette Basin, Oregon, through 1995

Available information on aquatic biota of the Willamette Basin was reviewed and summarized to describe current and historical conditions as part of the U.S. Geological Survey's National Water-Quality Assessment Program. Biological parameters emphasized include the status, distribution, and trends of aquatic biota, particularly algae, macroinvertebrates, and fish; the condition of aquatic and riparian habitat in which these biota reside; and the response of these biota to natural and human-associated impacts, including the level, type, and effect of contaminants. Considerable data are available on aquatic biota in the Willamette Basin, although the information is highly uneven relative to taxa and spatial scope. Extensive information exists for high-profile taxa, such as salmonid fishes, but less information is available for macroinvertebrates, and relatively little data exist for algae. Additionally, some areas such as the H.J. Andrews Experimental Forest and the main stem Willamette River have been extensively studied, whereas data are limited for many other areas. The basin supports a diverse aquatic macroinvertebrate fauna. Available data indicate a relatively high diversity of taxa and a high richness of Ephemeroptera, Plecoptera, Trichoptera (EPT) taxa in the upper reaches of the basin. In the lower main stem reaches, macroinvertebrate assemblages are dominated by pollution tolerant organisms and those adapted to low dissolved oxygen levels. Most of the limited data on algae are from sampling in the main stem Willamette River. Diatoms and blue-green algae are the dominant algal forms. Approximately 61 fish species occur in the basin, although nearly half are introduced. Species richness and distribution are highly correlated with elevation, stream gradient, and water temperature. High elevation, cold water, mountain streams are characterized by a few species of salmonids, sculpins, suckers, and whitefish. Low elevation, main stem reaches of major rivers and streams are dominated by warm water species, such as bass, catfish, and several species in the pan fish group. The only species of fish listed as threatened or endangered is the Oregon chub (Oregonichthys crameri). The effect of an expanding human presence in the Willamette Basin has substantially altered aquatic and riparian habitats, and the biota that use or reside in these habitats. Construction of dams, channelization and bank stabilization of rivers, species introductions, supplementations of fisheries through aquaculture, timber harvesting, agricultural activities, and urbanization have contributed to changes in aquatic habitats and biota from historical conditions. Aquatic toxicological investigations in the basin have focused primarily on fish. These studies have addressed chlorinated pesticides, polychlorinated biphenyls (PCBs), dioxins and furans, polycyclic aromatic hydrocarbons (PAHs), and trace elements in aquatic tissue, as well as fish health assessments, skeletal abnormalities, and aquatic toxicological responses. Several pesticides exceeded U.S. Environmental Protection Agency and State water-quality criteria for the protection of aquatic life. Elevated PCB, dioxin, and furan concentrations were associated with point sources, such as pulp and paper mills. Elevated concentrations of mercury in aquatic tissue were associated with several reservoirs. Fish health assessments and skeletal abnormality studies detected high levels of abnormalities in fish from the main stem Willamette River. Few investigations have examined aquatic toxicological responses, such as enzyme induction assays, growth assays, and biomarker studies.

Oregon↗
USGS1991

Effects of oil pollution on marine bird populations

Worldwide oil pollution has killed millions of marine birds in this century but it has been difficult to directly link these losses to population declines. Estimated bird losses from acute spills and chronic pollution are not precise because we usually do not know the proportion of birds killed at sea that are detected on beach surveys or the origin of those birds. Data required to assess effects on populations (abundance, distribution, productivity, recruitment and mortality rates) are inadequate or absent for many species. Local populations may sometimes be devastated by oil pollution, but whether these losses are biologically significant to global populations, especially in light of natural or human-induced sources of mortality, is debatable. In this paper. We review the evidence for effects of oil on marine bird populations, discuss four case histories, and address the debate concerning short- and long-term effects on avian populations.

Conference Paper↗
USGS2018

A review of coastal management approaches to support the integration of ecological and human community planning for climate change

The resilience of socio-ecological systems to sea level rise, storms and flooding can be enhanced when coastal habitats are used as natural infrastructure. Grey infrastructure has long been used for coastal flood protection but can lead to unintended negative impacts. Natural infrastructure often provides similar services as well as added benefits that support short- and long-term biological, cultural, social, and economic goals. While natural infrastructure is becoming more widespread in practice, it often represents a relatively small fraction within portfolios of coastal risk-reducing strategies compared to more traditional grey infrastructure. This study provides a comprehensive review of how natural infrastructure is being used along the United States Atlantic, Gulf of Mexico, and Caribbean coasts related to four habitats – tidal marshes, beaches and barrier islands, mangroves, and biogenic reefs. We compare information on the benefits, opportunities and challenges of implementing natural, grey and hybrid infrastructure in the coastal zone. In addition, we present a suite of actions to increase information and reduce uncertainty so that coastal mangers and planners are aware of the full suite of options for restoration, conservation and planning that maximize ecosystem services over short- and long-term planning horizons.

Journal of Coastal Conservation↗
USGS2021

Insect pathogenic fungi for biocontrol of plague vector fleas: A review

Bubonic plague is a lethal bacterial disease of great historical importance. The plague organism, Yersinia pestis , is primarily transmitted by fleas (Siphonaptera). In natural settings, where its range expands, Y. pestis resides in association with wild rodents and their fleas (sylvatic plague). While chemical insecticides are used against plague vector fleas, biological approaches have not been as critically evaluated. Benign and cost-effective control methods are sorely needed, particularly where imperiled species are at risk. Here we explore the potential of two representative insect pathogenic fungi, Beauveria bassiana Vuillemin 1912 (Hypocreales: Cordycipitaceae) and Metarhizium anisopliae Metschnikoff 1879 (Hypocreales: Clavicipitaceae), each already used commercially worldwide in large-scale agricultural applications, as candidate biopesticides for application against fleas. We review the life cycles, flea virulence, commercial production, and field application of these fungi, and ecological and safety considerations. Pathogenic fungi infections among natural flea populations suggest that conditions within at least some rodent burrows are favorable, and laboratory studies demonstrate lethality of these fungi to at least some representative flea species. Continued study and advancements with these fungi, under appropriate safety measures, may allow for effective biocontrol of plague vector fleas to protect imperiled species, decrease plague outbreaks in key rodent species, and limit plague in humans.

Journal of Integrated Pest Management↗
USGS2025

Microbial ecology of permafrost soils: Populations, processes, and perspectives

Permafrost microbial research has flourished in the past decades, due in part to improvements in sampling and molecular techniques, but also the increased focus on the permafrost greenhouse gas feedback to climate change and other ecological processes in high latitude and alpine permafrost soils. Permafrost microorganisms are adapted to these extreme environments and remain active at low temperatures and when resources are limited. They are also an important component of global elemental cycles as they regulate organic matter turnover and greenhouse gas production, particularly as permafrost thaws. Here we review the permafrost microbiology literature coupled with an exploration of its historical aspects, with a particular focus on a new understanding advanced by molecular biology techniques. We further identify knowledge gaps and ways forward to improve our understanding of microbial contributions to ecosystem biogeochemistry of permafrost-affected systems.

Permafrost and Periglacial Processes↗
USGS2023

Open water dreissenid mussel control projects: Lessons learned from a retrospective analysis

Dreissenid mussels are one of the most problematic aquatic invasive species (AIS) in North America, causing substantial ecological and economic effects. To date, dreissenid mussel control efforts in open water have included physical, biological, and chemical methods. The feasibility of successful dreissenid mussel management or eradication in lakes is relatively undocumented in the freshwater management literature. This review presents information on 33 open water dreissenid mussel control projects in 23 North America lakes. We reviewed data from past dreissenid mussel control projects and identified patterns and knowledge gaps to help inform adaptive management strategies. The three key lessons learned include (1) pre- and post-treatment survey methods that are designed to meet management objectives are beneficial, e.g., by sampling for all life stages and taking into account that no survey method is completely comprehensive; (2) defining the treatment area—particularly ensuring it is sufficiently large to capture all life stages present—is critical to meeting management objectives; and (3) control projects provide an opportunity to collect water chemistry, effects on non-target organisms, and other efficacy-related data that can inform safe and effective adaptive management.

Scientific Reports↗