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At least 289 records · Page 16Linked to original sources
USGS2005

Geochemistry and characteristics of nitrogen transport at a confined animal feeding operation in a coastal plain agricultural watershed, and implications for nutrient loading in the Neuse River basin, North Carolina, 1999-2002

Chemical, geologic, hydrologic, and age-dating information collected between 1999 and 2002 were used to examine the transport of contaminants, primarily nitrogen, in ground water and the pathways to surface water in a coastal plain setting in North Carolina. Data were collected from more than 35 wells and 4 surface-water sampling sites located in a 0.59 square-mile basin to examine detailed hydrogeology and geochemical processes affecting nutrient fate and transport. Two additional surface-water sampling sites were located downstream from the primary study site to evaluate basin-scale effects. Chemical and flow data also were collected at an additional 10 sites in the Coastal Plain portion of the Neuse River basin located between Kinston and New Bern, North Carolina, to evaluate loads transported in the Neuse River and primary tributary basins. At the Lizzie Research Station study site in North Carolina, horizontal flow is induced by the presence of a confining unit at shallow depth. Age-dating, chemical, and piezometric data indicate that horizontal flow from the surficial aquifer is the dominant source of ground water to streamflow. Nitrogen applied on cultivated fields at the Lizzie Research Station is substantially reduced as it moves from recharge to discharge areas. Denitrification in deeper parts of the aquifer and in riparian zones is indicated by a characterization of redox conditions in the aquifer and by the presence of excess nitrogen gas. Direct ground-water discharge of nitrate to surface water during base-flow conditions is unlikely to be significant because of strongly reducing conditions that occur in the riparian zones of these streams. Nitrate loads from a drainage tile at the study site may account for much of the nitrate load in the receiving stream, indicating that a major source of nutrients from ground water to this stream is artificial drainage. During base-flow conditions when the streams are not flowing, it is hypothesized that the mineralization of organic matter on the streambed is the source of nitrate and(or) ammonium in the stream. Base flow is a small contributor to nitrogen loads, because both flows and inorganic nitrogen concentrations are low during summer months. Effects of a confined hog operation on ground-water quality also were evaluated. The use of sprayed swine wastes to fertilize crops at the Lizzie Research Station study site since 1995 resulted in increased concentrations of nitrate and other chemical constituents in ground water beneath spray fields when compared to ground water beneath fields treated with commercial fertilizer. The nitrate concentration in ground water from the spray field well increased by a factor of 3.5 after 4 years of spray applications. Nitrate concentrations ranged from 10 to 35 milligrams per liter, and one concentration as high as 56 milligrams per liter was observed in water from this well in spring 2002. This finding is in agreement with findings of other studies conducted in the Coastal Plain of North Carolina that nitrate concentrations were significantly higher in ground water from cultivated fields sprayed with swine wastes than from fields treated with commercial fertilizer. Loads and yields of nitrogen and phosphorus in 14 streams in the Neuse River basin were evaluated for calendar years 2000 and 2001. Data indicate that anthropogenic effects on nitrogen yields were greatest in the first-order stream studied (yields were greater than 2 tons per square mile [ton/mi2] and 1 ton/mi2 or less in second- and higher-order streams) in the Little Contentnea Creek subbasin. Nitrogen yields in streams in the Contentnea Creek subbasin ranged from 0.59 to 2 ton/mi2 with typical yields of approximately 1 ton/mi2. Contentnea Creek near Evansdale had the highest yield (2 ton/mi2), indicating that a major source of nitrogen is upstream from this station. Nitrogen yields were lower at Contentnea Creek at Hookerton in 2000 and 2001 compared to previous yi

Scientific Investigations Report↗
USGS2013

Mapping spatial resources with GPS animal telemetry: foraging manatees locate seagrass beds in the Ten Thousand Islands, Florida, USA

Turbid water conditions make the delineation and characterization of benthic habitats difficult by traditional in situ and remote sensing methods. Here, we develop and validate modeling and sampling methodology for detecting and characterizing seagrass beds by analyzing GPS telemetry records from radio-tagged manatees. Between October 2002 and October 2005, 14 manatees were tracked in the Ten Thousand Islands (TTI) in southwest Florida (USA) using Global Positioning System (GPS) tags. High density manatee use areas were found to occur off each island facing the open, nearshore waters of the Gulf of Mexico. We implemented a spatially stratified random sampling plan and used a camera-based sampling technique to observe and record bottom observations of seagrass and macroalgae presence and abundance. Five species of seagrass were identified in our study area: Halodule wrightii, Thalassia testudinum, Syringodium filiforme, Halophila engelmannii, and Halophila decipiens. A Bayesian model was developed to choose and parameterize a spatial process function that would describe the observed patterns of seagrass and macroalgae. The seagrasses were found in depths <2 m and in the higher manatee use strata, whereas macroalgae was found at moderate densities at all sampled depths and manatee use strata. The manatee spatial data showed a strong association with seagrass beds, a relationship that increased seagrass sampling efficiency. Our camera-based field sampling proved to be effective for assessing seagrass density and spatial coverage under turbid water conditions, and would be an effective monitoring tool to detect changes in seagrass beds.

Florida↗
USGS2024

An evaluation of tradeoffs in restoring ephemeral vs. perennial habitats to conserve animal populations

Introduction: Habitat loss and degradation pose significant threats to global fish and wildlife populations, prompting substantial investments in habitat creation and restoration efforts. Not all habitats provide equal benefits, leading to challenges in prioritizing restoration actions. For example, juvenile anadromous salmonids require high quality rearing aquatic habitats to achieve the physiological requirements needed to successfully migrate to the ocean. However, there are profound disagreements among anadromous salmon restoration managers whether it is best to focus efforts on restoring in-channel habitats that are available for the entire rearing period or floodplain habitats that, while facilitating greater growth and survival than in-channel habitats, are only available for a few weeks at a time and are typically only activated every two-to-three years. Methods: We used an existing fall-run Chinook salmon decision-support model to evaluate under what conditions floodplain restoration would provide greater benefits than in-channel habitat restoration. The simulations included a wide range of floodplain inundation frequencies and durations and floodplain benefits in the form of increased survival and growth relative to in-channel habitats. Results: The simulations results indicated that in-channel habitat restoration was always the best habitat restoration action when there was no existing in-channel habitat despite simulating a wide range of flood frequency, duration, and growth and survival benefits. Floodplain restoration was generally best when there was sufficient in-channel habitat available to successfully rear most of the juveniles produced by the returning adult salmon. Discussion: We hypothesize that in-channel and floodplain habitats have different roles in salmon population maintenance with in-channel habitats regulating the overall population size and floodplains acting as recurrent resource pulses. Our study provides a quantitative framework to evaluate the benefit of these two habitat types and provides generalizable rulesets that can be used by managers when implementing habitat restoration strategies for species that inhabit both in-channel and floodplain habitats.

California↗
USGS2020

Cryptic lives of conspicuous animals: Otolith chemistry chronicles life histories of coastal lagoon fishes

Bar-built coastal lagoons are dynamic ecosystems at the land-sea interface that are important habitats for a variety of species. This study examined the habitat ecology of two lagoon species, the endangered Tidewater Goby ( Eucyclogobius newberryi ) and the Prickly Sculpin ( Cottus asper ) by reconstructing individual life histories from patterns in the concentration of the element Sr (as ratioed to Ca; Sr:Ca) in otoliths. Specific objectives were to (1) elucidate any movements of individual fishes among three primary habitat components of typical bar-built lagoon systems: coastal ocean, brackish lagoon, and freshwater watershed streams, and (2) determine if either species exhibited a consistent life history as defined by a stereotypical otolith Sr:Ca chronology, which could be indicative of a consistent range of salinity or temperature occupied through ontogeny. Results suggested that Tidewater Goby was a lagoon resident and that Prickly Sculpin exhibited migrations between lagoon and watershed stream habitats. There was no strong evidence in either species of ocean occupancy or of a stereotypical Sr:Ca chronology, the latter suggesting the full range of available lagoon habitat in terms of salinity and temperature was likely utilized at all life stages. These findings add to the body of evidence that bar-built lagoons are not isolated habitats, and holistic management of these habitats with adjoining watershed and marine environments could increase habitat connectivity across the landscape, with potential benefits to fishes.

California↗
USGS2022

Categorizing active marine acoustic sources based on their potential to affect marine animals

Marine acoustic sources are widely used for geophysical imaging, oceanographic sensing, and communicating with and tracking objects or robotic vehicles in the water column. Under the U.S. Marine Mammal Protection Act and similar regulations in several other countries, the impact of controlled acoustic sources is assessed based on whether the sound levels received by marine mammals meet the criteria for harassment that causes certain behavioral responses. This study describes quantitative factors beyond received sound levels that could be used to assess how marine species are affected by many commonly deployed marine acoustic sources, including airguns, high-resolution geophysical sources (e.g., multibeam echosounders, sidescan sonars, subbottom profilers, boomers, and sparkers), oceanographic instrumentation (e.g., acoustic doppler current profilers, split-beam fisheries sonars), and communication/tracking sources (e.g., acoustic releases and locators, navigational transponders). Using physical criteria about the sources, such as source level, transmission frequency, directionality, beamwidth, and pulse repetition rate, we divide marine acoustic sources into four tiers that could inform regulatory evaluation. Tier 1 refers to high-energy airgun surveys with a total volume larger than 1500 in 3 (24.5 L) or arrays with more than 12 airguns, while Tier 2 covers the remaining low/intermediate energy airgun surveys. Tier 4 includes most high-resolution geophysical, oceanographic, and communication/tracking sources, which are considered unlikely to result in incidental take of marine mammals and therefore termed de minimis . Tier 3 covers most non-airgun seismic sources, which either have characteristics that do not meet the de minimis category (e.g., some sparkers) or could not be fully evaluated here (e.g., bubble guns, some boomers). We also consider the simultaneous use of multiple acoustic sources, discuss marine mammal field observations that are consistent with the de minimis designation for some acoustic sources, and suggest how to evaluate acoustic sources that are not explicitly considered here.

Journal of Marine Science and Engineering↗
USGS2014

A recombinant raccoon poxvirus vaccine expressing both Yersinia pestis F1 and truncated V antigens protects animals against lethal plague.

In previous studies, we demonstrated in mice and prairie dogs that simultaneous administration of two recombinant raccoon poxviruses ( r RCN) expressing Yersinia pestis antigens (F1 and V307-a truncated version of the V protein) provided superior protection against plague challenge compared to individual single antigen constructs. To reduce costs of vaccine production and facilitate implementation of a sylvatic plague vaccine (SPV) control program for prairie dogs, a dual antigen construct is more desirable. Here we report the construction and characterization of a novel RCN-vectored vaccine that simultaneously expresses both F1 and V307 antigens. This dual antigen vaccine provided similar levels of protection against plague in both mice and prairie dogs as compared to simultaneous administration of the two single antigen constructs and was also shown to protect mice against an F1 negative strain of Y. pestis. . The equivalent safety, immunogenicity and efficacy profile of the dual RCN-F1/V307 construct warrants further evaluation in field efficacy studies in sylvatic plague endemic areas.

Vaccines↗