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Nutrient concentrations and their relations to the biotic integrity of wadeable streams in Wisconsin

Excessive nutrient (phosphorus and nitrogen) loss from watersheds is frequently associated with degraded water quality in streams. To reduce this loss, agricultural performance standards and regulations for croplands and livestock operations are being proposed by various States. In addition, the U.S. Environmental Protection Agency is establishing regionally based nutrient criteria that can be refined by each State to determine whether actions are needed to improve a stream's water quality. More confidence in the environmental benefits of the proposed performance standards and nutrient criteria will be possible with a better understanding of the biotic responses to a range of nutrient concentrations in different environmental settings. The U.S. Geological Survey and the Wisconsin Department of Natural Resources collected data from 240 wadeable streams throughout Wisconsin to: 1) describe how nutrient concentrations and biotic-community structure vary throughout the State; 2) determine which environmental characteristics are most strongly related to the distribution of nutrient concentrations; 3) determine reference water-quality and biotic conditions for different areas of the State; 4) determine how the biotic community of streams in different areas of the State respond to changes in nutrient concentrations; 5) determine the best regionalization scheme to describe the patterns in reference conditions and the responses in water quality and the biotic community; and 6) develop new indices to estimate nutrient concentrations in streams from a combination of biotic indices. The ultimate goal of this study is to provide the information needed to guide the development of regionally based nutrient criteria for Wisconsin streams. For total nitrogen (N) and suspended chlorophyll (SCHL) concentrations and water clarity, regional variability in reference conditions and in the responses in water quality to changes in land use are best described by subdividing wadeable streams into two categories: streams in areas with high clay-content soils (Environmental Phosphorus Zone 3, EPZ 3) and streams throughout the rest of the State. The regional variability in the response in total phosphorus (P) concentrations is also best described by subdividing the streams into these two categories; however, little consistent variability was found in reference P concentrations in streams throughout the State. Reference P concentrations are smilar throughout the State (0.03-0.04 mg/L). Reference N concentrations are divided into two categories: 0.6-0.7 mg/L in all streams except those in areas with high clay-content soils, where 0.4 mg/L is more appropriate. Reference SCHL concentrations are divided into two categories: 1.2-1.7 ?g/L in all streams except those in areas with high clay-content soils, where 1.0 ?g/L may be more appropriate. Reference water clarity is divided into two categories: streams in areas with high clay-content soils with a lower reference water clarity (Secchi tube depth, SD, of about 110 cm) and streams throughout the rest of the State (SD greater than or equal to about 115 cm). For each category of the biotic community (SCHL and benthic chlorophyll a concentrations (BCHL), periphytic diatoms, macroinvertebrates, and fish), a few biotic indices were more related to differences in nutrient concentrations than were others. For each of the indices more strongly related to nutrient concentrations, reference conditions were obtained by determining values corresponding to the worst 75th percentile value from a subset of minimally impacted streams (streams having reference nutrient concentrations). By examining the biotic community in streams having either reference P or N concentrations but not both, the relative importance of these two nutrients was determined. For SCHL, P was the more important limiting nutrient; however, for BCHL and all macroinvertebrate indices, it appears that N was the more important nutrient when concent

Professional Paper

The Border Environmental Health Initiative: Investigating the transboundary Santa Cruz watershed

In 2004 the U.S. Geological Survey (USGS) launched the Border Environmental Health Initiative (BEHI), a major project encompassing the entire U.S.-Mexico border region. In 2009, a study of the Santa Cruz River Watershed (SCW), located in the border region of Arizona and Sonora, Mexico, was initiated as part of the BEHI. In this borderland region of the desert Southwest, human health and the ecosystems on which humans rely depend critically on limited water resources. Surface water is scarce during much of the year, and groundwater is the primary source for industrial, agricultural, and domestic use. In order to identify risks to water resources in the SCW, and the potential consequences to riparian ecosystems and ultimately human health, the USGS is using an interdisciplinary and integrative approach that incorporates the expertise of geographers, hydrologists, biologists, and geologists to track organic and inorganic contaminants and their effects from sources to sinks in sediment, water, plants, and animals. Existing groundwater and surface-water models are being used and modified to assess contaminant and sediment transport.

Arizona, Sonora

Techniques for water demand analysis and forecasting: Puerto Rico, a case study

The rapid economic growth of the Commonwealth-of Puerto Rico since 1947 has brought public pressure on Government agencies for rapid development of public water supply and waste treatment facilities. Since 1945 the Puerto Rico Aqueduct and Sewer Authority has had the responsibility for planning, developing and operating water supply and waste treatment facilities on a municipal basis. The purpose of this study was to develop operational techniques whereby a planning agency, such as the Puerto Rico Aqueduct and Sewer Authority, could project the temporal and spatial distribution of .future water demands. This report is part of a 2-year cooperative study between the U.S. Geological Survey and the Environmental Quality Board of the Commonwealth of Puerto Rico, for the development of systems analysis techniques for use in water resources planning. While the Commonwealth was assisted in the development of techniques to facilitate ongoing planning, the U.S. Geological Survey attempted to gain insights in order to better interface its data collection efforts with the planning process. The report reviews the institutional structure associated with water resources planning for the Commonwealth. A brief description of alternative water demand forecasting procedures is presented and specific techniques and analyses of Puerto Rico demand data are discussed. Water demand models for a specific area of Puerto Rico are then developed. These models provide a framework for making several sets of water demand forecasts based on alternative economic and demographic assumptions. In the second part of this report, the historical impact of water resources investment on regional economic development is analyzed and related to water demand .forecasting. Conclusions and future data needs are in the last section.

Open-File Report

Data for a regional approach to the development of an effects-based nutrient criterion for wadable streams

States are required by the U.S. Environmental Protection Agency to establish nutrient criteria (concentrations of nutrients above which water quality is deteriorated) as part of their water-quality regulations. A study of wadable streams in the Mid-Atlantic Region was undertaken by the U.S. Geological Survey, the U.S. Environmental Protection Agency, and the Maryland Department of the Environment, with assistance from the Pennsylvania Department of Environmental Protection, to help define current concentrations of nutrients in streams with the goal of associating different nutrient-concentration levels with their effects on water quality. During the summers of 2004 and 2005, diel concentrations of dissolved oxygen, nutrient concentrations, concentrations of chlorophyll a in attached algae, and algal-community structure were measured at 46 stream sites in Maryland, Pennsylvania, Virginia, and West Virginia. Data from this work can be used by individual state agencies to define nutrient criteria. Quality-control measures for the study included submitting blank samples, duplicate samples, and reference samples for analysis of nutrients, total organic carbon, chlorophyll a, and algal biomass. Duplicate and split samples were submitted for periphyton identifications. Three periphyton split samples were sent to an independent lab for a check on periphyton identifications. Neither total organic carbon nor nutrients were detected in blank samples. Concentrations of nutrients and total organic carbon were similar for most duplicate sample pairs, with the exception of a duplicate pair from Western Run. Concentrations of ammonia plus organic nitrogen for this duplicate pair differed by as much as 34 percent. Total organic carbon for the duplicate pair from Western Run differed by 102 percent. The U.S. Geological Survey National Water Quality Laboratory performance on the only valid reference sample submitted was excellent; the relative percent difference values were no larger than 5 percent for any constituent analyzed. For periphyton identifications, duplicate samples had Jaccard Coefficient of Community values slightly greater than 0.5. This indicates the periphyton sampling protocol used provided a sample that was only moderately reproducible. Jaccard Coefficients for three periphyton samples split between two independent labs were 0.2, 0.11, and 0.08. These very low values suggest a poor concurrence on species identifications performed by the two labs. As a result of these quality-control samples, the slides prepared for diatom identifications were sent to the Academy of Natural Sciences for re-identification. Caution is urged when interpreting periphyton-community information from this study. This report and the raw data from the study are available online at http://pubs.usgs.gov/ds257

Maryland, Pennsylvania, Virginia, West Virginia

Environmental monitoring of groundwater, surface water, and soil at the Ammonium Perchlorate Rocket Motor Destruction Facility at the Letterkenny Army Depot, Chambersburg, Pennsylvania, 2021

Letterkenny Army Depot in Chambersburg, Pennsylvania, built an Ammonium Perchlorate Rocket Motor Destruction (ARMD) Facility in 2016 to centralize rocket motor destruction and contain all waste during the destruction process. The U.S. Geological Survey has collected environmental samples from groundwater, surface water, and soils at ARMD since 2016. During 2021, samples were collected from four groundwater wells in September, one surface-water site in October, and five soil sites in November near the facility. Samples were analyzed for nutrients, trace metals, major ions, total volatile organic compounds, and perchlorate. Perchlorate was not detected in any 2021 samples. Groundwater results showed no constituents exceeded any U.S. Environmental Protection Agency (EPA) maximum contaminant level (MCL). Dissolved arsenic (As) was detected in one well above the reporting detection level (RDL) of 3 micrograms per liter (μg/L) at 5.4 μg/L but below its MCL of 10 μg/L. Dissolved iron (Fe) was the only inorganic constituent measured above an EPA secondary maximum contaminant level (SMCL). All groundwater samples collected in 2021 exceeded the Fe SMCL of 300 μg/L, with concentrations ranging from 390 μg/L to 3,500 μg/L. Surface-water data collected during 2021 showed no measured constituents in the surface-water sample that exceeded any EPA MCL or SMCL. Soil samples collected from 2016 through 2021 showed all concentrations of As exceeded the EPA soil screening levels of 3 milligrams per kilogram (mg/kg) but did not exceed the Pennsylvania medium-specific concentrations for As of 61 mg/kg. Arsenic concentrations in 2021 ranged from 9.1 mg/kg to 12.9 mg/kg. The 2021 results for the ARMD Facility indicate no increases in concentrations of reported compounds compared to data from 2016 to 2020. The contained burn treatment facility for demilitarization of rocket motors during 2021 appears to have operated without elevating concentrations of target compounds compared to previous years.

Pennsylvania

Use case development for earth monitoring, analysis, and prediction (EarthMAP)—A road map for future integrated predictive science at the U.S. Geological Survey

Executive Summary The U.S. Geological Survey (USGS) 21st-century science strategy 2020–30 promotes a bureau-wide strategy to develop and deliver an integrated, predictive science capability that works at the scales and timelines needed to inform societally relevant resource management and protection and public safety and environmental health decisions (U.S. Geological Survey, 2021). This is the overarching goal of the USGS Earth Monitoring, Analysis, and Prediction (EarthMAP) vision, which consists of three components: (1) integrated data and information, (2) integrated predictive science, and (3) actionable information—all designed and delivered to respond to user needs. To launch this vision and help shape the design and implementation of integrated predictive science, the USGS Regional Offices each developed a set of use cases (hereafter Use Cases)—short descriptions of potential science applications that could clearly address high priority decision-making needs of our stakeholders and that align with an integrated science focus. Use Cases are not actionable science planning documents, nor stand-alone scholarly works, but should be considered as innovative, next-generation science ideas that can be considered as potential components of science plans still under development. The goal of Use Case development was to (1) identify and characterize existing USGS scientific capacities and expertise that can support science goals and products, (2) identify opportunities to leverage current capacities for next-generation science, and (3) foster engagement across the entire Bureau to further refine the USGS strategy for EarthMAP and integrated predictive science. The Use Case development effort documented in this report was coordinated by the Use Case Development Team (UCDT), consisting of representatives from each region. The UCDT undertook five tasks: (1) develop a unified approach to engage bureau scientists consistently across all regions in aspirational thinking about what can be accomplished; (2) work with the regions and their Science Centers to generate an initial set of Use Cases, authored directly by scientists; (3) characterize, summarize, and document the initial set of Use Case submissions from authors to illuminate bureau-level demand for integrated science; (4) compare existing and needed capacities from the Use Case descriptions with preliminary results of the EarthMAP Capacity Assessment (Keisman and others, 2021); and (5) describe lessons learned from the Use Case development process and provide recommendations to inform future efforts to generate integrated science activities. This report outlines the approach the UCDT developed to solicit Use Cases from the regions and summarizes the high-level qualitative findings from this first-round effort. The UCDT received 36 Use Cases from the regions and identified potential points of convergence and commonalities considered useful in making connections among the participating scientists. The Southwest (SW) Region and the Rocky Mountain (RM) Region asked scientists to give special consideration to Use Cases with applicability to the Colorado River Basin, and seven of the Use Cases specifically named that geographic area as a focus. Coastal hazards and coastal resilience were identified in Use Cases from the Alaska (AK), Northeast (NE), and Southeast (SE) Regions. Aspects of wildfire and post-wildfire response were part of Uses Cases from AK, RM, and SW Regions. The greatest convergence of Use Case themes was related to conservation of public lands and waters, which is a powerful linkage lending strength to future collaborative efforts. The most common type of stakeholder decisions that would be informed by the Use Case science applications were related to adaptation, mitigation, and response (for example, how to increase the resilience of coastal communities to climate-related stressors and how to prevent or respond to harmful algal blooms). Other common types of decisions included water and land management decisions (including operational water management decisions such as reservoir operations and land use planning in the sagebrush biome), decisions about how to manage and conserve habitats and species, and risk management decisions (such as managing the post-wildfire flood risks). These decision types are not exclusive because many Use Cases cross categories. Use Case authors identified existing and needed science and technology capabilities required for Use Case implementation, which were then aligned to capabilities assessed in the EarthMAP Capacity Assessment (Keisman and others, 2021). Strong alignment was found for data and information integration approaches, modeling and prediction approaches, and capabilities related to delivery of actionable information. A majority of Use Cases indicated insufficient current capacity for needed data collection methods, data integration, and modeling and prediction approaches, whereas only 25 percent indicated insufficient capacity for actionable information delivery. Overall, many Use Case capacity demand gaps could potentially be met by existing bureau-wide capacity. In addition, nearly half of the Use Cases could potentially be implemented within 3 years if funding, capabilities, and personnel impediments were removed and science priorities were realigned. Several challenges emerged during the Use Case development process. The first challenge was developing an approach that was flexible enough to accommodate regional differences in planning and implementation, while also ensuring enough guidance to promote meaningful summary analyses. The UCDT encountered a strong demand for continuous communication and education to improve overall understanding of the integrated predictive science strategy. Another challenge was managing expectations about EarthMAP activities as a design effort that was not aligned to an immediate funding opportunity. Connecting the Use Cases to stakeholder needs without the opportunity for direct stakeholder engagement was also challenging. The last notable challenge was in obtaining consistent interpretation and characterization of the qualitative data housed in the narrative descriptions of Use Cases, written in different styles. Overall, the 36 Use Cases can serve as components of a road map for advancing integrated monitoring and predictive science throughout the USGS by revealing opportunities to (1) encourage cross-region initiatives that address shared interests in common themes by integrating similar Use Cases and through direct involvement of stakeholders in identifying needs and designing effective responses, (2) leverage the Use Cases to target investments that are aligned with the Bureau and Department of the Interior (DOI) priorities, (3) connect Use Cases and the results of the companion EarthMAP Capacity Assessment (Keisman and others, 2021) to identify potential priorities for capacity building investments, and (4) raise awareness of common integrated and interdisciplinary science interests within and across the regions through Use Case and Capacity Assessment summary outreach activities.

Open-File Report

Questa baseline and pre-mining ground-water quality investigation. 25. Summary of results and baseline and pre-mining ground-water geochemistry, Red River Valley, Taos County, New Mexico, 2001-2005

Active and inactive mine sites are challenging to remediate because of their complexity and scale. Regulations meant to achieve environmental restoration at mine sites are equally challenging to apply for the same reasons. The goal of environmental restoration should be to restore contaminated mine sites, as closely as possible, to pre-mining conditions. Metalliferous mine sites in the Western United States are commonly located in hydrothermally altered and mineralized terrain in which pre-mining concentrations of metals were already anomalously high. Typically, those pre-mining concentrations were not measured, but sometimes they can be reconstructed using scientific inference. Molycorp?s Questa molybdenum mine in the Red River Valley, northern New Mexico, is located near the margin of the Questa caldera in a highly mineralized region. The State of New Mexico requires that ground-water quality standards be met on closure unless it can be shown that potential contaminant concentrations were higher than the standards before mining. No ground water at the mine site had been chemically analyzed before mining. The aim of this investigation, in cooperation with the New Mexico Environment Department (NMED), is to infer the pre-mining ground-water quality by an examination of the geologic, hydrologic, and geochemical controls on ground-water quality in a nearby, or proximal, analog site in the Straight Creek drainage basin. Twenty-seven reports contain details of investigations on the geological, hydrological, and geochemical characteristics of the Red River Valley that are summarized in this report. These studies include mapping of surface mineralogy by Airborne Visible-Infrared Imaging Spectrometry (AVIRIS); compilations of historical surface- and ground- water quality data; synoptic/tracer studies with mass loading and temporal water-quality trends of the Red River; reaction-transport modeling of the Red River; environmental geology of the Red River Valley; lake-sediment chemistry; geomorphology and its effect on ground-water flow; geophysical studies on depth to ground-water table and depth to bedrock; bedrock fractures and their potential influence on ground-water flow; leaching studies of scars and waste-rock piles; mineralogy and mineral chemistry and their effect on ground-water quality; debris-flow hazards; hydrology and water balance for the Red River Valley; ground-water geochemistry of selected wells undisturbed by mining in the Red River Valley; and quality assurance and quality control of water analyses. Studies aimed specifically at the Straight Creek natural-analog site include electrical surveys; high-resolution seismic survey; age-dating with tritium/helium; water budget; ground-water hydrology and geochemistry; and comparison of mineralogy and lithology to that of the mine site. The highly mineralized and hydrothermally altered volcanic rocks of the Red River Valley contain several percent pyrite in the quartz-sericite-pyrite (QSP) alteration zone, which weather naturally to acid-sulfate surface and ground waters that discharge to the Red River. Weathering of waste-rock piles containing pyrite also contributes acid water that eventually discharges into the Red River. These acid discharges are neutralized by circumneutral-pH, carbonate-buffered surface and ground waters of the Red River. The buffering capacity of the Red River, however, decreases from the town of Red River to the U.S. Geological Survey (USGS) gaging station near Questa. During short, but intense, storm events, the buffering capacity is exceeded and the river becomes acid from the rapid flushing of acidic materials from natural scar areas. The lithology, mineralogy, elevation, and hydrology of the Straight Creek proximal analog site were found to closely approximate those of the mine site with the exception of the mine site?s Sulphur Gulch catchment. Sulphur Gulch contains three subcatchments?upper Sulphur Gulch, Blind Gulch, and Spring Gulc

New Mexico

Central Colorado Assessment Project (CCAP)-Geochemical data for rock, sediment, soil, and concentrate sample media

This database was initiated, designed, and populated to collect and integrate geochemical data from central Colorado in order to facilitate geologic mapping, petrologic studies, mineral resource assessment, definition of geochemical baseline values and statistics, environmental impact assessment, and medical geology. The Microsoft Access database serves as a geochemical data warehouse in support of the Central Colorado Assessment Project (CCAP) and contains data tables describing historical and new quantitative and qualitative geochemical analyses determined by 70 analytical laboratory and field methods for 47,478 rock, sediment, soil, and heavy-mineral concentrate samples. Most samples were collected by U.S. Geological Survey (USGS) personnel and analyzed either in the analytical laboratories of the USGS or by contract with commercial analytical laboratories. These data represent analyses of samples collected as part of various USGS programs and projects. In addition, geochemical data from 7,470 sediment and soil samples collected and analyzed under the Atomic Energy Commission National Uranium Resource Evaluation (NURE) Hydrogeochemical and Stream Sediment Reconnaissance (HSSR) program (henceforth called NURE) have been included in this database. In addition to data from 2,377 samples collected and analyzed under CCAP, this dataset includes archived geochemical data originally entered into the in-house Rock Analysis Storage System (RASS) database (used by the USGS from the mid-1960s through the late 1980s) and the in-house PLUTO database (used by the USGS from the mid-1970s through the mid-1990s). All of these data are maintained in the Oracle-based National Geochemical Database (NGDB). Retrievals from the NGDB and from the NURE database were used to generate most of this dataset. In addition, USGS data that have been excluded previously from the NGDB because the data predate earliest USGS geochemical databases, or were once excluded for programmatic reasons, have been included in the CCAP Geochemical Database and are planned to be added to the NGDB.

Colorado

Environmental effects of historical mining in the Animas River watershed, southwestern Colorado

The U.S. Geological Survey has completed an extensive environmental study of the effects of historical mining on water and sediment quality and aquatic and riparian habitat in the Animas River watershed upstream from Silverton, Colorado. Results from this study are being used by Federal and State agencies and by the local watershed stakeholders group to implement remediation and cleanup activities. The Watershed Approach provides an effective means to rank and evaluate environmental impact of historical mining throughout a region: The mining-related sites that, upon evaluation, are shown to cause the greatest impact can become the subjects of remediation planning and implementation. This process helps land managers evaluate risk and focus remediation efforts on sites that may be the most deleterious to water quality and aquatic and riparian habitat.

Colorado

U.S. Geological Survey resource assessment of selected Tertiary coal zones in Wyoming, Montana and North Dakota

In 1999, 1 Gt (1.1 billion st) of coal was produced in the United States. Of this total, 37% was produced in Wyoming, Montana and North Dakota. Coals of Tertiary age from these states typically have low ash contents. Most of these coals have sulfur contents that are in compliance with Clean Air Act standards and most have low concentrations of the trace elements that are of environmental concern. The U.S. Geological Survey (USGS) National Coal Resource Assessment for these states includes geologic, stratigraphic, palynologic and geochemical studies and resource calculations for major Tertiary coal zones in the Powder River, Williston, Greater Green River, Hanna and Carbon Basins. Calculated resources are 595 Gt (655 billion st). Results of the study are available in a USGS Professional Paper and a USGS Open-File Report, both in CD-ROM format.

Mining Engineering

Field trials of an autonomous eDNA sampler in lotic waters

Environmental DNA (eDNA) analysis has become a transformative technology, but sample collection methods lack standardization and sampling at effective frequencies requires considerable field effort. Autonomous eDNA samplers that can sample water at high frequencies offer potential solutions to these problems. We present results from four case studies using a prototype autonomous eDNA sampler as part of the U.S. Geological Survey’s Rapid Environmental eDNA Assessment and Deployment Initiative & Network (READI-Net) project. These case studies involved short-term deployments of an eDNA autosampler (Smith-Root) across a range of riverine habitats with the objectives of (a) identifying what insights could be gained from high-frequency autosampling and (b) benchmarking these autosamples against manually collected samples. The high frequency autosampling revealed high temporal variability of eDNA concentrations and provided valuable insights about eDNA associations with environmental covariates, such as discharge and turbidity. Benchmarking assessments indicated autosamples had similar detection rates to manual samples and obtained similar or greater eDNA quantities. We did find minimal carryover contamination in autosampler field controls. We conclude that eDNA autosamplers have potential to improve freshwater biosurveillance by reducing logistical sampling barriers, standardizing collection methods, and clarifying the influence of environmental covariates on eDNA results.

Idaho, Missouri, Montana, New York

Environmental and hydrologic setting of the Ozark Plateaus study unit, Arkansas, Kansas, Missouri, and Oklahoma

The environmental and hydrologic setting of the Ozark Plateaus National Water-Quality Assessment (NAWQA) study unit and the factors that affect water quality are described in this report. The primary natural and cultural features that affect water- quality characteristics and the potential for future water-quality problems are described. These environmental features include climate, physio- graphy, geology, soils, population, land use, water use, and surface- and ground-water flow systems. The study-unit area is approximately 47,600 square miles and includes most of the Ozark Plateaus Province and parts of the adjacent Osage Plains and Mississippi Alluvial Plain in parts of Arkansas, Kansas, Missouri, and Oklahoma. The geology is characterized by basement igneous rocks overlain by a thick sequence of dolomites, limestones, sandstones, and shales of Paleozoic age. Land use in the study unit is predominantly pasture and forest in the southeastern part, and pasture and cropland in the northwestern part. All or part of the White, Neosho-lllinois, Osage, Gasconade, Meramec, St. Francis, and Black River Basins are within the study unit. Streams in the Boston Mountains contain the least mineralized water, and those in the Osage Plains contain the most mineralized water. The study unit contains eight hydrogeologic units including three major aquifers--the Springfield Plateau, Ozark, and St. Francois aquifers. Streams and aquifers in the study unit generally contain calcium or calcium-magnesium bicarbonate waters. Ground- and surface-water interactions are greatest in the Salem and Springfield Plateaus and least in the Boston Mountains and Osage Plains. Geology, land use, and population probably are the most important environmental factors that affect water quality.

Water-Resources Investigations Report

GAGES: A stream gage database for evaluating natural and alteredflow conditions in the conterminous United States

Stream flow is a controlling element in the ecology of rivers and streams. Knowledge of the natural flow regime facilitates the assessment of whether specific hydrologic attributes have been altered by humans in a particular stream and the establishment of specific goals for stream-flow restoration. Because most streams are ungaged or have been altered by human influences, characterizing the natural flow regime is often only possible by estimating flow characteristics based on nearby stream gages of reference quality, i.e., gaged locations that are least disturbed by human influences. The ability to evaluate natural stream flow, that which is not altered by human activities, would be enhanced by the existence of a nationally consistent and up-to-date database of gages in relatively undisturbed watersheds. As part of a national effort to characterize stream-flow effects on ecological condition, data for 6785 U.S. Geological Survey (USGS) stream gages and their upstream watersheds were compiled. The sites comprise all USGS stream gages in the conterminous United States with at least 20 years of complete-year flow record from 1950–2007, and for which watershed boundaries could reliably be delineated (median size ¼ 578 km2). Several hundred watershed and site characteristics were calculated or compiled from national data sources, including environmental features (e.g., climate, geology, soils, topography) and anthropogenic influences (e.g., land use, roads, presence of dams, or canals). In addition, watersheds were assessed for their reference quality within nine broad regions for use in studies intended to characterize stream flows under conditions minimally influenced by human activities. Three primary criteria were used to assess reference quality: (1) a quantitative index of anthropogenic modification within the watershed based on GIS-derived variables, (2) visual inspection of every stream gage and drainage basin from recent high-resolution imagery and topographic maps, and (3) information about man-made influences from USGS Annual Water Data Reports. From the set of 6785 sites, we identified 1512 as reference-quality stream gages. All data derived for these watersheds as well as the reference condition evaluation are provided as an online data set termed GAGES (geospatial attributes of gages for evaluating stream flow).

Ecology

3D semantic mapping of surface geological features

Semantic mapping in 3D is fundamental to a wide range of geoscientific studies and applications, including geomorphology, hazard assessment, and environmental monitoring. However, automatically segmenting geological features from large-scale photogrammetric datasets remains a significant challenge. We present a methodology to address this gap. Using overlapping images collected over environments of interest, Structure-from-Motion (SfM) produces georeferenced point clouds and estimates camera poses. Existing large vision models, such as Segment Anything Model, segment objects in the images, generating pixel-segmentation associations. To produce pixel-point associations, we project the points back onto the camera image planes. As objects are independently segmented across multiple images with different perspectives, we develop a segmentation mosaicking algorithm to build probabilistic point-segmentation associations that combines the pixel-segmentation associations and pixel-point associations. Our methodology is validated using both synthetic data generated by Kubric and real-world UAV-SfM data. The implementation is designed to be compatible with existing SfM software, including Agisoft and OpenDroneMap, for photogrammetry mapping in geoscience studies. As a case study, we apply our method to the semantic mapping of precariously balanced rocks (PBRs), which provide upper-bound constraints on historical ground motion shaking intensity. To support object-level identification of PBRs, we additionally integrated Grounding DINO, enabling text-prompted segmentation of features of interest within UAV imagery. This case study demonstrates the effectiveness of our method in generating a 3D semantic map of PBRs, enabling spatial distribution of PBR fragility for earthquake hazard analysis.

Computers & Geosciences

Geospatial database for regional environmental assessment of central Colorado.

In conjunction with the future planning needs of the U.S. Department of Agriculture, Forest Service, the U.S. Geological Survey conducted a detailed environmental assessment of the effects of historical mining on Forest Service lands in central Colorado. Stream sediment, macroinvertebrate, and various filtered and unfiltered water quality samples were collected during low-flow over a four-year period from 2004–2007. This report summarizes the sampling strategy, data collection, and analyses performed on these samples. The data are presented in Geographic Information System, Microsoft Excel, and comma-delimited formats. Reports on data interpretation are being prepared separately.

Colorado

Geology, hydrology, and ground-water quality at the Byron Superfund site near Byron, Illinois

A study was conducted by the U.S. Geological Survey and the U.S. Environmental Protection Agency to define the geohydrology and contaminant distribution at a Superfund site near Byron, Illinois. Geologic units of interest beneath the site are the St. Peter Sandstone; the shale, dolomite and sandstone of the Glenwood Formation; the dolomite of the Platteville and Galena Groups; and sands, gravels, tills and loess of Quaternary age. The hydrologic units of interest are the unconsolidated aquifer, Galena-Platteville aquifer, Harmony Hill Shale semiconfining unit, and the St. Peter aquifer. Ground-water flow generally is from the upland areas northwest and southwest toward the Rock River. Water levels indicate the potential for downward ground-water flow in most of the area except near the Rock River. The Galena-Platteville aquifer can be subdivided into four zones characterized by differing water-table altitudes, hydraulic gradients, and vertical and horizontal permeabilities. Geophysical, hydraulic, and aquifer-test data indicate that lithology, stratigraphy, and tectonic structures affect the distribution of primary and secondary porosity of dolomite in the Galena and Platteville Groups, which affects the permeability distribution in the Galena-Platteville aquifer. The distribution of cyanide, chlorinated aliphatic hydrocarbons, and aromatic hydrocarbons in ground water indicates that these contaminants are derived from multiple sources in the study area. Contaminants in the northern part of this area migrate northwest to the Rock River. Contaminants in the central and southern parts of this area appear to migrate to the southwest in the general direction of the Rock River.

Water-Resources Investigations Report

Final executive summary report; environmental studies, southeastern United States Atlantic Outer Continental Shelf, 1977; geology

Starting in mid 1976 and continuing into 1977 a variety of geological studies were carried out by the U. S. Geological Survey on the southeastern U. S. Atlantic Continental Margin to assess conditions and hazards that might cause or distribute oil spills or other pollutants, or constrain petroleum exploration or development of the area. These detailed investigations were requested and funded by the Bureau of Land Management to carry out its responsibility under the Outer Continental Shelf (OCS) Lands Act of 1969. Because of the energy crisis the decision had been made to lease on the southeastern continental shelf. A variety of studies had to be mounted quickly for input into decisions concerning the environment that would affect or constrain which lease tracks would be offered. The first lease sale, Lease Sale 43, took place in March 1978, and the environmental information on which this lease sale was based came in part from this initial effort and in part from a wide variety of pertinent data assembled from the literature by the Bureau of Land Management's Environmental Assessment Division. The compilation of relevant data for the Environmental Impact Statement for Lease Sale 43 also pointed up deficiencies in environmental knowledge in a number of areas. The Bureau of Land Management's environmental program for the Southeast Atlantic OCS was initiated to fill gaps in the environmental data base and to detect and assess impacts from oil and gas exploration and production.

Florida, North Carolina, South Carolina

Undergraduate research projects help promote diversity in the geosciences

A workforce that draws from all segments of society and mirrors the ethnic, racial, and gender diversity of the United States population is important. The geosciences (geology, hydrology, geospatial sciences, environmental sciences) continue to lag far behind other science, technology, engineering and mathematical (STEM) disciplines in recruiting and retaining minorities (Valsco and Valsco, 2010). A report published by the National Science Foundation in 2015, “Women, Minorities, and Persons with Disabilities in Science and Engineering” states that from 2002 to 2012, less than 2% of the geoscience degrees were awarded to African-American students. Data also show that as of 2012, approximately 30% of African-American Ph.D. graduates obtained a bachelor’s degree from a Historic Black College or University (HBCU), indicating that HBCUs are a great source of diverse students for the geosciences. This paper reviews how an informal partnership between Tennessee State University (a HBCU), the U.S. Geological Survey, and Mammoth Cave National Park engaged students in scientific research and increased the number of students pursuing employment or graduate degrees in the geosciences.

Conference Paper