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At least 235 records · Page 13Linked to original sources
USGS2020

Generalizing indirect defense and resistance of plants

Indirect defence, the adaptive top‐down control of herbivores by plant traits that enhance predation, is a central component of plant–herbivore interactions. However, the scope of interactions that comprise indirect defence and associated ecological and evolutionary processes has not been clearly defined. We argue that the range of plant traits that mediate indirect defence is much greater than previously thought, and we further organise major concepts surrounding their ecological functioning. Despite the wide range of plant traits and interacting organisms involved, indirect defences show commonalities when grouped. These categories are based on whether indirect defences boost natural enemy abundance via food or shelter resources, or, alternatively, increase natural enemy foraging efficiency via information or alteration of habitat complexity. The benefits of indirect defences to natural enemies should be further explored to establish the conditions in which indirect defence generates a plant–natural enemy mutualism. By considering the broader scope of plant–herbivore–natural enemy interactions that comprise indirect defence, we can better understand plant‐based food webs, as well as the evolutionary processes that have shaped them.

Ecology Letters↗
USGS2021

SMaRT: A science-based tiered framework for common ravens

Large-scale increases and expansion of common raven ( Corvus corax ; raven) populations are occurring across much of North America, leading to increased negative consequences for livestock and agriculture, human health and safety, and sensitive species conservation. We describe a science-based adaptive management framework that incorporates recent quantitative analyses and mapping products for addressing areas with elevated raven numbers and minimizing potential adverse impacts to sensitive species, agricultural damage, and human safety. The framework comprises 5 steps: (1) desktop analysis; (2) field assessments; (3) comparison of raven density estimates to an ecological threshold (in terms of either density or density plus distance to nearest active or previous nest); (4) prescribing management options using a 3-tiered process (i.e., habitat improvements, subsidy reductions, and direct actions using StallPOPd.V4 software); and (5) post-management monitoring. The framework is integrated within the Science-based Management of Ravens Tool (SMaRT), a web-based application outfitted with a user-friendly interface that guides managers through each step to develop a fully customized adaptive plan for raven management. In the SMaRT interface, users can: (1) interact with pre-loaded maps of raven occurrence and density and define their own areas of interest within the Great Basin to delineate proposed survey or treatment sites; (2) enter site-level density estimates from distance sampling methods or perform estimation of raven densities using the rapid assessment protocol that we provide; (3) compare site-level density estimates to an identified ecological threshold; and (4) produce a list of potential management options for their consideration. The SMaRT supports decision-making by operationalizing scientific products for raven management and facilitates realization of diverse management goals including sensitive species conservation, protection of livestock and agriculture, safeguarding human health, and addressing raven overabundance and expansion. We illustrate the use of the framework through SMaRT using an example of greater sage-grouse ( Centrocercus urophasianus ) conservation efforts within the Great Basin, USA.

California, Idaho, Nevada, Oregon, Utah↗
USGS2013

Data management challenges in species distribution modeling

An important component in the fields of ecology and conservation biology is understanding the environmental conditions and geographic areas that are suitable for a given species to inhabit. A common tool in determining such areas is species distribution modeling which uses computer algorithms to determine the spatial distribution of organisms. Most commonly the correlative relationships between the organism and environmental variables are the primary consideration. The data requirements for this type of modeling consist of known presence and possibly absence locations of the species as well as the values of environmental or climatic covariates thought to define the species habitat suitability at these locations. These covariate data are generally extracted from remotely sensed imagery, interpolated/gridded historical climate data, or downscaled climate model output. Traditionally, ecologists and biologists have constructed species distribution models using workflows and data that reside primarily on their local workstations or networks. This workflow is becoming challenging as scientists increasingly try to use these modeling techniques to inform management decisions under different climate change scenarios. This challenge stems from the fact that remote sensing products, gridded historical climate, and downscaled climate models are not only increasing in spatial and temporal resolution but proliferating as well. Any rigorous assessment of uncertainty requires a computationally intensive sensitivity analysis accounting for various sources of uncertainty. The scientists fitting these models generally do not have the background in computer science required to take advantage of recent advances in web-service based data acquisition, remote high-powered data processing, or scientific workflow systems. Ecologists in the field of modeling are in need of a tractable platform that abstracts the inherent computational complexity required to incorporate the burgeoning field of coupled climate and ecological response modeling. In this paper we describe the computational challenges in species distribution modeling and solutions using scientific workflow systems. We focus on the Software for Assisted Species Modeling (SAHM) a package within VisTrails, an open-source scientific workflow system.

Bulletin of the Technical Committee on Data Engine↗
USGS2013

Mercury in gray wolves (Canis lupus) in Alaska: Increased exposure through consumption of marine prey

Mercury (Hg) bioaccumulates in the tissues of organismsand biomagnifies within food-webs. Graywolves (Canis lupus) in Alaska primarily acquire Hg through diet; therefore, comparing the extent of Hg exposure inwolves, in conjunction with stable isotopes, from interior and coastal regions of Alaska offers important insight into their feeding ecology. Liver, kidney, and skeletal muscle samples from 162 graywolves were analyzed for total mercury (THg) concentrations and stable isotopic signatures (δ 13 C, δ 15 N, and δ 34 S).Median hepatic THg concentrations were significantly higher in wolves with coastal access compared to wolves from interior Alaska. Stable isotope ratios, in conjunction with THg concentrations, provide strong evidence that coastal wolves are utilizing marine prey representing several trophic levels. The utilization of cross-ecosystem food resources by coastal wolves is clearly contributing to increased THg exposure, and may ultimately have negative health implications for these animals.

Alaska↗
USGS2025

Fate and effects to the benthic community of a copper treatment to eradicate invasive mussels in a large western river, USA

Copper-based chemical treatments are commonly used to eradicate invasive mussels in small ponds and lakes, but their use in large rivers has been limited. In 2023, in response to a detection of invasive quagga mussels, a 10-km reach of the Snake River (Idaho, USA), was treated with an unprecedented 19,300 kg of chelated copper molluscicide to a target concentration of 1,000 µg/L for 10 days. We assessed the transport and fate of the copper and its exposure and effects on the nontarget benthic community downstream. Water samples were collected at seven locations throughout the treatment period, and sediment, periphyton, and benthic macroinvertebrates were collected pre- and posttreatment. Nearly half of the original mass of copper was removed from the water column via sedimentation, sorption to algae, or biological uptake within the 10-km treatment reach and the first 15 km downstream. Even so, dissolved copper concentrations exceeded the acute toxicity threshold at least as far as 28 km downstream for more than 2 weeks. Sediment copper increased by up to 8.3-fold, exceeding the consensus-based sediment quality threshold effect concentration at several sites. Effects on benthic macroinvertebrates varied by taxa. From 0–28 km downstream, invertebrate abundances decreased 52%–94%, with gastropods among the most affected. Of the unique taxa present at these sites pretreatment, 52%–64% were not found posttreatment but were replaced by other taxa, indicating a reorganization of the base of the food web. Additionally, from 0–15 km downstream, the percentage of individuals from tolerant taxa increased two to15-fold. Findings from this study can help watershed managers plan future invasive mussel responses while protecting culturally, economically, and ecologically important nontarget species in large rivers.

Idaho↗
USGS2019

Antipredator response diminishes during periods of resource deficit for a large herbivore

The starvation-predation hypothesis predicts that, during resource shortages, prey forego antipredator behavior and forage as much as possible to avoid starvation, even when risk of predation is high. We tested this hypothesis using GPS locations collected simultaneously from moose (Alces alces) and wolves (Canis lupus) in the Greater Yellowstone Ecosystem of North America. We assessed shifts in the speed, displacement, and habitat selection of moose 24 hours following encounter with wolves (0–1500 m distance). We examined whether the strength of antipredator behaviors would weaken as winter progressed and the nutritional condition of moose declined. Moose responded to wolf encounters by increasing their rate of movement in early winter, but only within 500 m distance. Importantly, these responses attenuated as winter progressed. Moose did not avoid their preferred foraging habitat (riparian areas) following encounters with wolves at any distance, and instead they more strongly selected riparian areas, especially in early winter. Our findings support theoretical predictions that resource deficits should dampen prey antipredator behavior, and suggest that nutritional condition of prey may buffer against run-away risk effects in food webs involving large mammalian predators and prey.

Wyoming↗
USGS2005

A synthesis of ecological and fish-community changes in Lake Ontario, 1970-2000

We assessed stressors associated with ecological and fishcommunity changes in Lake Ontario since 1970, when the first symposium on Salmonid Communities in Oligotrophic Lakes (SCOL I) was held (J. Fish. Res. Board Can. 29: 613-616). Phosphorus controls implemented in the early 1970s were undeniably successful; lower food-web studies showed declines in algal abundance and epilimnetic zooplankton production and a shift in pelagic primary productivity toward smaller organisms. Stressors on the fish community prior to 1970 such as exploitation, sea lamprey ( Petromyzon marinus ) predation, and effects of nuisance populations of alewife ( Alosa pseudoharengus ) were largely ameliorated by the 1990s. The alewife became a pivotal species supporting a multi-million-dollar salmonid sport fishery, but alewife-induced thiamine deficiency continued to hamper restoration and sustainability of native lake trout ( Salvelinus namaycush ). Expanding salmonine populations dependent on alewife raised concerns about predator demand and prey supply, leading to reductions in salmonine stocking in the early 1990s. Relaxation of the predation impact by alewives and their shift to deeper water allowed recovery of native fishes such as threespine stickleback (Gasterosteus aculeatus) and emerald shiner ( Notropis atherinoides ). The return of the Lake Ontario ecosystem to historical conditions has been impeded by unplanned introductions. Establishment of Dreissena spp. led to increased water clarity and increased vectoring of lower trophic-level production to benthic habitats and contributed to the collapse of Diporeia spp. populations, behavioral modifications of key fish species, and the decline of native lake whitefish (Coregonus clupeaformis ). Despite reduced productivity, exotic-species introductions, and changes in the fish community, offshore Mysis relicta populations remained relatively stable. The effects of climate and climate change on the population abundance and dynamics of Lake Ontario fish were unknown at the time of SCOL I, but a temperature-time series begun in the late 1950s in the Kingston Basin has since provided evidence of climate warming and associated fish-community changes. We should expect ecological surprises in the coming decades that will challenge scientists and fishery managers especially as they face new exotic species, climate warming, and escalating stakeholder demands on the resource. Continuous long-term ecological studies were critical for interpreting changes in Lake Ontario's fish community over the past three decades and will be essential in the future for both scientific understanding and management of the fishery.

Technical Report↗
USGS2010

Streamflow characteristics and benthic invertebrate assemblages in streams across the western United States

Hydrographic characteristics of streamflow, such as high-flow pulses, base flow (background discharge between floods), extreme low flows, and floods, significantly influence aquatic organisms. Streamflow can be described in terms of magnitude, timing, duration, frequency, and variation (hydrologic regime). These characteristics have broad effects on ecosystem productivity, habitat structure, and ultimately on resident fish, invertebrate, and algae communities. Increasing human use of limited water resources has modified hydrologic regimes worldwide. Identifying the most ecologically significant hydrographic characteristics would facilitate the development of water-management strategies. Benthic invertebrates include insects, mollusks (snails and clams), worms, and crustaceans (shrimp) that live on the streambed. Invertebrates play an important role in the food web, consuming other invertebrates and algae and being consumed by fish and birds. Hydrologic alteration associated with land and water use can change the natural hydrologic regime and may affect benthic invertebrate assemblage composition and structure through changes in density of invertebrates or taxa richness (number of different species). This study examined associations between the hydrologic regime and characteristics of benthic invertebrate assemblages across the western United States and developed tools to identify streamflow characteristics that are likely to affect benthic invertebrate assemblages.

Fact Sheet↗
USGS2023

Climate change and pulse migration: Intermittent Chugach Inuit occupation of glacial fiords on the Kenai Coast, Alaska

For millennia, Inuit peoples of the Arctic and Subarctic have been challenged by the impacts of climate change on the abundance of key subsistence species. Responses to climate-induced declines in animal populations included switching to alternative food sources and/or migrating to regions of greater availability. We examine these dynamics for the Chugach Inuit (Sugpiat) people of southern coastal Alaska by synthesizing a large body of evidence from archeological sites, including radiocarbon dates and archaeofaunal assemblages, and by applying contemporary knowledge of glaciomarine ecosystems, spatial patterns of resource richness, and ocean-climate induced regime shifts in the Gulf of Alaska. We hypothesize that Chugach groups migrated from Cook Inlet and Prince William Sound to the Kenai Peninsula during periods of low sea surface temperatures (SSTs) to harvest harbor seals, which were seasonally aggregated near tidewater glaciers during pupping season, as well as piscivorous seabirds, Pacific cod, and other species that thrive under cool ocean conditions. During warming phases, the Chugach returned to Cook Inlet and Prince William Sound to fish for salmon and other species that abound during higher SSTs. Drivers of this coupled human-natural system of repeated (pulse) migration include the Pacific Decadal Oscillation (PDO), the dominant pattern of sea surface temperatures in the North Pacific that has been shown to generate step-like regime shifts in the marine food web; and coastal glaciers that structure the functioning of fiord ecosystems and support high levels of biological productivity. The culturally-constructed Chugach niche in the glaciomarine habitat of the Gulf of Alaska was based on intergenerationally transmitted ecological knowledge that enabled a resilient, mobile response to climate and resource variation.

Alaska↗
USGS2025

A framework for guiding management decisions for amphibians in an uncertain future

Managing species in a rapidly changing climate requires knowledge of how species will respond to climate change and other threats while simultaneously developing management actions to reduce threats. Amphibians are one of the most threatened taxa on earth and often serve as the ‘canary in the coalmine’ for the health of ecosystems that countless other species and humans rely on. To understand the status of and guide management for the boreal toad (Anaxyrus boreas boreas), an imperiled amphibian species in the North Central region, we coproduced several products with the Boreal Toad Conservation Team. These products included 1) reconstructed seasonal hydrology patterns for historical boreal toad breeding wetlands and high elevation watersheds in the Southern Rocky Mountain Region (SRMR) from remotely sensed data, 2) current and future predictions of drying rates for historical breeding wetlands, 3) current and future predictions on the status of the boreal toad in the SRMR, and 4) a web tool to guide management actions. While the boreal toad is considered a ‘data rich’ species given data collection efforts that span multiple decades, many amphibian species are considered ‘data poor’, meaning managers lack data on the biology, ecology, or status of the species needed to make sound decisions. To address this knowledge gap, we also quantified drying patterns across watersheds for two ‘data poor’ species in the North Central region at risk from climate change: the Great Basin spadefoot toad ( Spea intermontana ) and the wood frog ( Lithobates sylvaticus ). These new data can guide management decisions for these species by allowing managers to understand habitat changes with respect to water availability, a crucial element for amphibian survival and persistence. Together, these products demonstrate how cutting-edge technology and analytical methods can produce a range of useful information to support amphibian conservation.

Colorado, New Mexico, Wyoming↗
USGS2024

Mechanisms by which marine heatwaves impact seabirds

Marine heatwaves (MHWs) are characterized by periods of extreme warming of local to basin-scale marine habitat. Effects of MHWs on some seabirds (e.g. mass die-offs) are well documented, but mechanisms by which seabirds respond to MHWs remain poorly understood. Following from a symposium at the 3 rd World Seabird Conference, this Theme Section presents recent research to address this knowledge gap. Studies included here spanned one or more MHW event, at spatial scales from individual seabird colonies to large marine ecosystems in subtropical, temperate, and polar oceans, and over timespans from months to decades. The findings summarized herein indicate that MHWs can affect seabirds directly by creating physiological heat stress that affects behavior or survival, or indirectly by disrupting seabird food webs, largely by altering metabolic rates in ectothermic prey species, leading to effects on their associated predators and prey. Four main mechanisms by which MHWs affect seabirds are (1) habitat modification, (2) physiological forcing, (3) behavioral responses, and (4) ecological processes or species interactions. Most seabird species have experienced limited effects from MHWs to date, owing to ecological and behavioral adaptations that buffer MHW effects. However, the intensity and frequency of MHWs is increasing due to global warming, and more seabird species may have difficulty coping with future heatwave events. Also, MHW impacts can persist for years after a MHW ends, so consequences of recent or future MHWs could continue to unfold over time for many long-lived seabird species.

MEPS↗
USGS2004

Complex trophic interactions in kelp forest ecosystems

The distributions and abundances of species and populations change almost continuously. Understanding the processes responsible is perhaps ecology’s most fundamental challenge. Kelp-forest ecosystems in southwest Alaska have undergone several phase shifts between alga- and herbivore-dominated states in recent decades. Overhunting and recovery of sea otters caused the earlier shifts. Studies focusing on these changes demonstrate the importance of top-down forcing processes, a variety of indirect food-web interactions associated with the otter-urchin-kelp trophic cascade, and the role of food-chain length in the coevolution of defense and resistance in plants and their herbivores. This system unexpectedly shifted back to an herbivore-dominated state during the 1990s, because of a sea-otter population collapse that apparently was driven by increased predation by killer whales. Reasons for this change remain uncertain but seem to be linked to the whole-sale collapse of marine mammals in the North Pacific Ocean and southern Bering Sea. We hypothesize that killer whales sequentially "fished down" pinniped and sea-otter populations after their earlier prey, the great whales, were decimated by commercial whaling. The dynamics of kelp forests in southwest Alaska thus appears to have been influenced by an ecological chain reaction that encompassed numerous species and large scales of space and time.

Bulletin of Marine Science↗
USGS2009

Top 10 principles for designing healthy coastal ecosystems like the Salish Sea

Like other coastal zones around the world, the inland sea ecosystem of Washington (USA) and British Columbia (Canada), an area known as the Salish Sea, is changing under pressure from a growing human population, conversion of native forest and shoreline habitat to urban development, toxic contamination of sediments and species, and overharvest of resources. While billions of dollars have been spent trying to restore other coastal ecosystems around the world, there still is no successful model for restoring estuarine or marine ecosystems like the Salish Sea. Despite the lack of a guiding model, major ecological principles do exist that should be applied as people work to design the Salish Sea and other large marine ecosystems for the future. We suggest that the following 10 ecological principles serve as a foundation for educating the public and for designing a healthy Salish Sea and other coastal ecosystems for future generations: (1) Think ecosystem: political boundaries are arbitrary; (2) Account for ecosystem connectivity; (3) Understand the food web; (4) Avoid fragmentation; (5) Respect ecosystem integrity; (6) Support nature's resilience; (7) Value nature: it's money in your pocket; (8) Watch wildlife health; (9) Plan for extremes; and (10) Share the knowledge.

British Columbia, Washington↗
USGS2015

Fire effects on aquatic ecosystems: An assessment of the current state of the science

Fire is a prevalent feature of many landscapes and has numerous and complex effects on geological, hydrological, ecological, and economic systems. In some regions, the frequency and intensity of wildfire have increased in recent years and are projected to escalate with predicted climatic and landuse changes. In addition, prescribed burns continue to be used in many parts of the world to clear vegetation for development projects, encourage desired vegetation, and reduce fuel loads. Given the prevalence of fire on the landscape, authors of papers in this special series examine the complexities of fire as a disturbance shaping freshwater ecosystems and highlight the state of the science. These papers cover key aspects of fire effects that range from vegetation loss and recovery in watersheds to effects on hydrology and water quality with consequences for communities (from algae to fish), food webs, and ecosystem processes (e.g., organic matter subsidies, nutrient cycling) across a range of scales. The results presented in this special series of articles expand our knowledge of fire effects in different biomes, water bodies, and geographic regions, encompassing aquatic population, community, and ecosystem responses. In this overview, we summarize each paper and emphasize its contributions to knowledge on fire ecology and freshwater ecosystems. This overview concludes with a list of 7 research foci that are needed to further our knowledge of fire effects on aquatic ecosystems, including research on: 1) additional biomes and geographic regions; 2) additional habitats, including wetlands and lacustrine ecosystems; 3) different fire severities, sizes, and spatial configurations; and 4) additional response variables (e.g., ecosystem processes) 5) over long (>5 y) time scales 6) with more rigorous study designs and data analyses, and 7) consideration of the effects of fire management practices and policies on aquatic ecosystems.

Freshwater Science↗
USGS2011

Feeding ecology and energetics

Successful management of walleye and sauger populations often requires a detailed knowledge of prey resources. As with many fishes, diets of juvenile Sander spp. are often different than those of adult fish and can have important implications for growth and survival. Similarly, spatial and temporal variation in diet composition can contribute to variation in growth and production of Sander populations. Thus, management efforts (e.g., stocking) aimed at enhancing walleye and sauger populations benefit from the knowledge and tools to effectively quantify feeding patterns. Today, fisheries managers face a myriad of challenges posed by nonnative species, eutrophication, climate change, and water availability, to name just a few. As a result, knowledge about prey use, energetics, and effects of Sander populations on food web structure has increased dramatically in the last 30 years. Experimental work with larval and juvenile walleyes has provided new insights into factors affecting growth and survival during early life stages (see Chapter 7) that has benefitted management and propagation efforts. Similarly, contemporary analytical approaches, such as bioenergetics modeling and stable isotope analysis, have improved our understanding of walleye foraging behavior and provided new tools for exploring trophic interactions. In this chapter, we review the general feeding ecology of walleye and sauger and highlight contemporary approaches for quantifying energy acquisition and trophic interactions.

Book chapter↗
USGS2024

Imperiled Great Basin terminal lakes: Synthesizing ecological and hydrological science gaps and research needs for waterbird conservation

Terminal lakes are declining globally because of human water demands, drought, and climate change. Through literature synthesis and feedback from the resource and conservation community, we review the state of research for terminal lakes in the Great Basin of the United States, which support millions of waterbirds annually, to prioritize ecological and hydrologic information needs. From an ecological perspective, research priorities include measuring the underlying differences in waterbird resource selection and distribution, migratory connectivity, abiotic factors that interact with prey densities to affect prey availability, and waterbird fitness or demography. Integrated links between water availability, water quality, and food webs are lacking in the literature. Scarce water availability data hinder the current knowledge of water extraction and evapotranspiration rates. Research that can address these priorities would help advance our understanding of how the Great Basin terminal lakes function as an interrelated system and support conservation efforts to reverse the decline of these critical lakes.

California, Nevada, Oregon, Utah↗
USGS2010

The inverse niche model for food webs with parasites

Although parasites represent an important component of ecosystems, few field and theoretical studies have addressed the structure of parasites in food webs. We evaluate the structure of parasitic links in an extensive salt marsh food web, with a new model distinguishing parasitic links from non-parasitic links among free-living species. The proposed model is an extension of the niche model for food web structure, motivated by the potential role of size (and related metabolic rates) in structuring food webs. The proposed extension captures several properties observed in the data, including patterns of clustering and nestedness, better than does a random model. By relaxing specific assumptions, we demonstrate that two essential elements of the proposed model are the similarity of a parasite's hosts and the increasing degree of parasite specialization, along a one-dimensional niche axis. Thus, inverting one of the basic rules of the original model, the one determining consumers' generality appears critical. Our results support the role of size as one of the organizing principles underlying niche space and food web topology. They also strengthen the evidence for the non-random structure of parasitic links in food webs and open the door to addressing questions concerning the consequences and origins of this structure.

Theoretical Ecology↗
USGS2016

Flow management for hydropower extirpates aquatic insects, undermining river food webs

Dams impound the majority of rivers and provide important societal benefits, especially daily water releases that enable on-peak hydroelectricity generation. Such “hydropeaking” is common worldwide, but its downstream impacts remain unclear. We evaluated the response of aquatic insects, a cornerstone of river food webs, to hydropeaking using a life history–hydrodynamic model. Our model predicts that aquatic-insect abundance will depend on a basic life-history trait—adult egg-laying behavior—such that open-water layers will be unaffected by hydropeaking, whereas ecologically important and widespread river-edge layers, such as mayflies, will be extirpated. These predictions are supported by a more-than-2500-sample, citizen-science data set of aquatic insects from the Colorado River in the Grand Canyon and by a survey of insect diversity and hydropeaking intensity across dammed rivers of the Western United States. Our study reveals a hydropeaking-related life history bottleneck that precludes viable populations of many aquatic insects from inhabiting regulated rivers.

BioScience↗