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At least 235 records · Page 13Linked to original sources

USGS2002

New Mexico structural zone - An analogue of the Colorado mineral belt

Updated aeromagnetic maps of New Mexico together with current knowledge of the basement geology in the northern part of the state (Sangre de Cristo and Sandia–Manzano Mountains)—where basement rocks were exposed in Precambrian-cored uplifts—indicate that the northeast-trending Proterozoic shear zones that controlled localization of ore deposits in the Colorado mineral belt extend laterally into New Mexico. The shear zones in New Mexico coincide spatially with known epigenetic precious- and base-metal ore deposits; thus, the mineralized belts in the two states share a common inherited basement tectonic setting. Reactivation of the basement structures in Late Cretaceous–Eocene and Mid-Tertiary times provided zones of weakness for emplacement of magmas and conduits for ore-forming solutions. Ore deposits in the Colorado mineral belt are of both Late Cretaceous–Eocene and Mid-Tertiary age; those in New Mexico are predominantly Mid-Tertiary in age, but include Late Cretaceous porphyry-copper deposits in southwestern New Mexico. The mineralized belt in New Mexico, named the New Mexico structural zone, is 250-km wide. The northwest boundary is the Jemez subzone (or the approximately equivalent Globe belt), and the southeastern boundary was approximately marked by the Santa Rita belt. Three groups (subzones) of mineral deposits characterize the structural zone: (1) Mid-Tertiary porphyry molybdenite and alkaline-precious-metal deposits, in the northeast segment of the Jemez zone; (2) Mid-Tertiary epithermal precious-metal deposits in the Tijeras (intermediate) zone; and (3) Late Cretaceous porphyry-copper deposits in the Santa Rita zone. The structural zone was inferred to extend from New Mexico into adjacent Arizona. The structural zone provides favorable sites for exploration, particularly those parts of the Jemez subzone covered by Neogene volcanic and sedimentary rocks.

Arizona, California, Colorado, Idaho, Montana, New↗

USGS2000

Characterization of seismic hazard and structural response by energy flux

Seismic safety of structures depends on the structure's ability to absorb the seismic energy that is transmitted from ground to structure. One parameter that can be used to characterize seismic energy is the energy flux. Energy flux is defined as the amount of energy transmitted per unit time through a cross-section of a medium, and is equal to kinetic energy multiplied by the propagation velocity of seismic waves. The peak or the integral of energy flux can be used to characterize ground motions. By definition, energy flux automatically accounts for site amplification. Energy flux in a structure can be studied by formulating the problem as a wave propagation problem. For buildings founded on layered soil media and subjected to vertically incident plane shear waves, energy flux equations are derived by modeling the buildings as an extension of the layered soil medium, and considering each story as another layer. The propagation of energy flux in the layers is described in terms of the upgoing and downgoing energy flux in each layer, and the energy reflection and transmission coefficients at each interface. The formulation results in a pair of simple finite-difference equations for each layer, which can be solved recursively starting from the bedrock. The upgoing and downgoing energy flux in the layers allows calculation of the energy demand and energy dissipation in each layer. The methodology is applicable to linear, as well as nonlinear structures. ?? 2000 Published by Elsevier Science Ltd.

Soil Dynamics and Earthquake Engineering↗

USGS2013

Hanawaltite, Hg1+6Hg2+[Cl,(OH)]2O3 - A new mineral from the Clear Creek claim, San Benito County, California: Description and crystal structure

Hanawaltite, ideally Hg 1+ 6 Hg 2+ O 3 Cl 2 , is orthorhombic, Pbma (57), with unit-cell parameters refined from powder data: a =11.790(3), b =13.881(4), c =6.450(2) Å, V =1055.7(6) Å 3 , a : b : c =0.8494:1:0.4647, Z =4. The strongest six lines of the X-ray powder-diffraction pattern [ d in Å ( I )( hkl )] are: 5.25 (80)(111), 3.164 (60)(231), 3.053 (100)(041), 2.954 (70)(141), 2.681 (50)(401), and 2.411 (50)(232,341). The mineral is an extremely rare constituent in a small prospect pit near the long-abandoned Clear Creek mercury mine, New Idria district, San Benito County, California. It was found on a single-fracture surface where it is intimately associated with calomel, native mercury, cinnabar, montroydite, and quartz. Individual crystals are subhedral to anhedral, platy to somewhat bladed, and average about 50 μm in longest dimension. The largest known crystal is approximately 0.3×0.3 mm in size and is striated parallel [001]. Hanawaltite is opaque to translucent (on very thin edges), black to very dark brown–black in color, with a black to dark red–brown streak. Other physical properties include: metallic luster; cleavage {001} good; uneven fracture; brittle; nonfluorescent; H <5; calculated density (for the empirical formula) 9.51 g/cm 3 . In polished section, hanawaltite is moderately to strongly bireflectant and is pleochroic white ( R I ) to blue–white ( R 2 ). In reflected plane-polarized light, it is white with orange–red internal reflections in very thin grains and at grain margins. The anisotropy is strong with bright metallic blue rotation tints. Measured reflectance values, in air and in oil, are tabulated. Electron-microprobe analysis yielded Hg 2 O 82.46, HgO 14.27, Cl 3.33, H 2 O [0.34], sum [100.40], less O=Cl 0.75, total [99.65] wt. %, corresponding to Hg 1+ 6.00 Hg 2+ 1.00 [Cl 1.43 (OH) 0.57 ] Σ2.00 O 3.00 , based on O+Cl=5. After the crystal structure was determined, the original microprobe value for Hg 2 O, 96.2, was partitioned in a ratio of 6Hg 2 O:HgO and (OH) was calculated, such that Cl+(OH)=2. The hanawaltite structure consists of undulatory [Hg–Hg] 2+ ribbons which roughly parallel (100). The diatomic [Hg–Hg] 2+ groups have anion tails which, in turn, serve as cross linkages between dimer ribbons through [Hg 2+ O 2 Cl 2 ] planar rhombs. The structure is compared to that of other mercury oxychlorides and each is found to have its own unique structural features. This structural diversity is attributed to the inherent ability of mercury to adopt either metallic or ionic types of bonds. The mineral name honors the late Dr. J. D. (Don) Hanawalt (1903–1987), who was a pioneer in the field of X-ray powder diffraction.

California↗

USGS2017

Effects of sulfide concentration and dissolved organic matter characteristics on the structure of nanocolloidal metacinnabar

Understanding the speciation of divalent mercury (Hg(II)) in aquatic systems containing dissolved organic matter (DOM) and sulfide is necessary to predict the conversion of Hg(II) to bioavailable methylmercury. We used X-ray absorption spectroscopy to characterize the structural order of mercury in Hg(II)–DOM–sulfide systems for a range of sulfide concentration (1–100 μM), DOM aromaticity (specific ultraviolet absorbance (SUVA 254 )), and Hg(II)–DOM and Hg(II)–DOM–sulfide equilibration times (4–142 h). In all systems, Hg(II) was present as structurally disordered nanocolloidal metacinnabar (β-HgS). β-HgS nanocolloids were significantly smaller or less ordered at lower sulfide concentration, as indicated by under-coordination of Hg(II) in β-HgS. The size or structural order of β-HgS nanocolloids increased with increasing sulfide abundance and decreased with increasing SUVA 254 of the DOM. The Hg(II)–DOM or Hg(II)–DOM–sulfide equilibration times did not significantly influence the extent of structural order in nanocolloidal β-HgS. Geochemical factors that control the structural order of nanocolloidal β-HgS, which are expected to influence nanocolloid surface reactivity and solubility, should be considered in the context of mercury bioavailability.

Environmental Science & Technology↗

USGS2003

Historic range of variability in landscape structure in subalpine forests of the Greater Yellowstone Area, USA

A measure of the historic range of variability (HRV) in landscape structure is essential for evaluating current landscape patterns of Rocky Mountain coniferous forests that have been subjected to intensive timber harvest. We used a geographic information system (GIS) and FRAGSTATS to calculate key landscape metrics on two ???130,000-ha landscapes in the Greater Yellowstone Area, USA: one in Yellowstone National Park (YNP), which has been primarily shaped by natural fires, and a second in the adjacent Targhee National Forest (TNF), which has undergone intensive clearcutting for nearly 30 years. Digital maps of the current and historical landscape in YNP were developed from earlier stand age maps developed by Romme and Despain. Maps of the TNF landscape were adapted from United States Forest Service Resource Information System (RIS) data. Key landscape metrics were calculated at 20-yr intervals for YNP for the period from 1705-1995. These metrics were used to first evaluate the relative effects of small vs. large fire events on landscape structure and were then compared to similar metrics calculated for both pre- and post-harvest landscapes of the TNF. Large fires, such as those that burned in 1988, produced a structurally different landscape than did previous, smaller fires (1705-1985). The total number of patches of all types was higher after 1988 (694 vs. 340-404 before 1988), and mean patch size was reduced by almost half (186 ha vs. 319-379 ha). The amount of unburned forest was less following the 1988 fires (63% vs. 72-90% prior to 1988), yet the number of unburned patches increased by nearly an order of magnitude (230 vs. a maximum of 41 prior to 1988). Total core area and mean core area per patch decreased after 1988 relative to smaller fires (???73,700 ha vs. 87,000-110,000 ha, and 320 ha vs. 2,123 ha, respectively). Notably, only edge density was similar (17 m ha-1 after 1988) to earlier landscapes (9.8-14.2 m ha-1). Three decades of timber harvesting dramatically altered landscape structure in the TNF. Total number of patches increased threefold (1,481 after harvest vs. 437 before harvest), and mean patch size decreased by ???70% (91.3 ha vs. 309 ha). None of the post-harvest landscape metrics calculated for the TNF fell within the HRV as defined in YNP, even when the post-1988 landscape was considered. In contrast, pre-harvest TNF landscape metrics were all within, or very nearly within, the HRV for YNP While reference conditions such as those identified by this study are useful for local and regional landscape evaluation and planning, additional research is necessary to understand the consequences of changes in landscape structure for population, community, ecosystem, and landscape function.

Landscape Ecology↗

USGS2023

Rift basins and intraplate earthquakes: New high-resolution aeromagnetic data provide insights into buried structures of the Charleston, South Carolina seismic zone

The delineation of faults that pose seismic risk in intraplate seismic zones and the mapping of features associated with failed rift basins can help our understanding of links between the two. We use new high-resolution aeromagnetic data, previous borehole sample information, and reprocessed seismic reflection profiles to image subsurface structures and evaluate recent fault activity within the Charleston seismic zone, the associated Mesozoic South Georgia rift basin, and surrounds. The new aeromagnetic data provide an unprecedented view of buried basement structures. NE- and NW-trending lineaments of various lengths throughout the survey area are interpreted as Paleozoic orogenic structures and Mesozoic dikes, respectively. Within the rift basin, 15- to 20-km long ESE-trending lineaments are associated with faults in pre-Cretaceous strata of the reflection data and are interpreted as Mesozoic rift structures. Various intersections and terminations of interpreted faults suggest rift-related reactivation of Paleozoic faults and corresponding inheritance for Mesozoic structures. The reflection data show that several Paleozoic and Mesozoic faults are associated with deformation in Cretaceous and younger sediments, suggesting reactivation in the more recent passive margin setting. Two of these faults, one NE-striking and one ESE-striking, are coincident with surficial landforms, suggesting Quaternary slip; the ESE-striking fault is also well-aligned with a plan-view offset in modern seismicity. A favorable orientation for reverse motion on ESE-striking Mesozoic faults, a possible sub-basin, and potentially weakened lithosphere are failed rift basin features that may influence intraplate seismicity within the Charleston seismic zone.

South Carolina↗

USGS2012

Basin and range crustal and upper mantle structure, northwest to central Nevada

We present an interpretation of the crustal and uppermost mantle structure of the Basin and Range of northwestern Nevada based on seismic refraction/wide‐angle reflection, near‐vertical reflection, and gravity data. In comparison to most previous estimates, we find that the crust is somewhat thicker (32–36 km versus 22–30 km), and the uppermost mantle velocity is somewhat higher (8.0 km/s versus 7.3–7.9 km/s). Along our transects, the crust is thinnest (32 km) in the Carson Sink‐Buena Vista Valley region and increases by 2–4 km to the west and east, respectively. There is considerable complexity throughout the crust where velocities range from of 2.5 km/s at the surface to 7.4 km/s in the lowermost crust. Variations in velocity and structure of the upper crustal layers reveal apparent basement velocity depressions (areas of lower velocities extending up to 10 km in depth) that underlie some surface ranges as well as the basins. The middle crust rises from about 20 km beneath central Nevada to within 12 km of the surface beneath the area of thinnest crust and is characterized by a modest (∼0.1 km/s) change in velocity and low‐velocity gradients. These midcrustal layers mark the onset of high crustal reflectivity and the apparent limiting depth to which Basin and Range faults can be traced in near‐vertical reflection profiles, suggesting that these midcrustal layers represent the transition between the brittle and ductile zones of the crust. The lower crust is more structurally complex, with layers thickening and thinning in a systematic manner with the upper crustal layers; generally, where there are velocity depressions in the upper crust, the lower crust is thickest and shallowest. The geometry of these lower crustal layers (derived from refraction modeling) coincides with changes in the crustal reflectivity, determined from the Consortium of Continental Reflection Profiling reflection data. The lower crustal layer is unusually high in velocity (7.4 km/s) and is likely the layer identified as mantle in some previous studies. We do not identify the 7.4 km/s layer as mantle because (1) there is an underlying layer with a velocity (8.0 km/s) that is more consistent with the worldwide average velocity for the upper mantle, and (2) the 7.4 km/s layer does not correspond to the “reflection” Moho. Gravity modeling and comparison to existing seismic models show a general consensus in many aspects with respect to crustal structure. This new model forms the basis for speculation on some of the processes associated with rifting of the Basin and Range Province. One such process, lithospheric magmatism, is inferred from the strong attenuation of transmitted seismic waves, which occurs at the same interface at which high‐amplitude, bright spot reflections originate. Unlike previous models, the overall structure and velocity of the crust and uppermost mantle of our new model are similar to other regions worldwide which have undergone high degrees of extension.

Nevada↗

USGS1998

Contour mapping of relic structures in the Precambrian basement of the Reelfoot rift, North American midcontinent

A new contour map of the basement of the Reelfoot rift constructed from drill hole and seismic reflection data shows the general surface configuration as well as several major and minor structural features. The major features are two asymmetric intrarift basins, bounded by three structural highs, and the rift margins. The basins are oriented normal to the northeast trend of the rift. Two of the highs appear to be ridges of undetermined width that extend across the rift. The third high is an isolated dome or platform located between the basins. The minor features are three linear structures of low relief oriented subparallel to the trend of the rift. Two of these, located within the rift basins, may divide the rift basins into paired subbasins. These mapped features may be the remnants of initial extensional rifting, half graben faulting, and basement subsidence. The rift basins are interpreted as having formed as opposing half graben, and the structural highs are interpreted as having formed as associated accommodation zones. Some of these features appear to be reactivated seismogenic structures within the modem midcontinent compressional stress regime. A detailed knowledge of the geometries of the Reelfoot rift's basement features, therefore, is essential when evaluating their seismic risk potential.

Reelfoot rift↗

USGS2012

Structural analysis of the southern Peninsular, southern Wrangellia, and northern Chugach terranes along the Trans-Alaska Crustal Transect, northern Chugach Mountains, Alaska

Structural and tectonic analysis of the southern Peninsular, southern Wrangellia, and northern Chugach terranes, along the Trans-Alaska Crustal Transect in the northern Chugach Mountains documents a long succession of Early Jurassic through Cenozoic deformational events. The deformational events are generally characterized by distinctive structural fabrics and metamorphisms. Most of the events are interpreted to be related to subduction-related accretion or terrane accretion along the Border Ranges fault system (BRFS) and companion faults, and the Contact fault system (CFS). Each period of subduction-related accretion consisted of underplating of the outboard unit beneath the adjacent inboard unit. The fabric associated with each subduction-related accretion consisted of folding, intense shearing, and local rolling of planar structures. Age and structural relationships suggest migration of the zone of subduction-related accretion from the BRFS to the north, through each accreting unit, to younger bounding thrust faults to the south. Other older and younger deformational events are also recognized and are interpreted to have formed before and after, respectively, accretions along the BRFS and CFS. The main younger deformational events are (1) early Tertiary north verging folding of portions of the northern Chugach and southern Wrangellia terranes and (2) broad folding and rotation of major and minor structures related to subduction-related accretion or terrane accretion during early and middle Tertiary oroclinal bending of Alaska.

Journal of Geophysical Research Solid Earth↗

USGS2000

Sedimentary and upper crustal structure of Australia from receiver functions

The initial coda of teleseismic P-waves contains considerable information about the crust and upper mantle structure directly beneath a receiver. When this information can be recovered for a dense network of seismographs much can be learned about the structure of the earth. Data from the high quality broadband seismic stations of the SKIPPY and KIMBA projects along with permanent stations are used to investigate the upper crustal structure of Australia. A dataset of 65 shear-velocity models derived from receiver functions has enabled the sedimentary and upper crustal structure of Australia to be summarised. Regions of thick soft sediment show good agreement with topographical lows. A simple relation between upper-crustal velocity and magnetisation, as has been suggested by other investigators, has not been observed, but this may be due to the magnetic signal being muted by overlying sediments. A prominent mid-crustal discontinuity is apparent in the Tasman and New England mega-elements. This may represent a mid-crustal decollement that had structural control during accretion.

Australian Journal of Earth Sciences↗

USGS2012

Effect of low-head lock and dam structures on migration and spawning of American shad and striped bass in the Cape Fear River, North Carolina

Anadromous fish populations within the Cape Fear River, North Carolina, have declined substantially since the late 1800s. Three low-head lock-and-dam (LD) structures on the river (LD-1–3) contributed to this decline by limiting access to upstream spawning habitat. We used egg sampling and sonic telemetry to examine the effects of the LD structures on migration and spawning activity of American shad Alosa sapidissima and striped bass Morone saxatilis . Egg distribution and stage of development suggested that most of the American shad spawning took place downstream from the lowermost structure, LD-1. The predicted mean density of stage-1 American shad eggs at a water temperature of 21°C was 895 eggs/1,000 m 3 (95% credible interval [CI] = 800–994) below LD-1; 147 eggs/1,000 m 3 (95% CI = 103–197) below LD-2; and 32 eggs/1,000 m 3 (95% CI = 17–49) below the uppermost structure, LD-3. The probability of capturing a stage-1 American shad egg was strongly dependent on water temperature and hour of egg collection. Transmitter detections for 20 sonic-tagged American shad and 20 striped bass in 2008 showed that for both species, the majority of fish moved upstream of LD-1; 35% of American shad and 25% of striped bass migrated upstream of LD-3. Based on passage rates at the three LD structures, American shad would be expected to be most abundant downstream of LD-1 and upstream of LD-3. For striped bass, the river section between LD-2 and LD-3 had the highest egg collections and highest predicted proportion of the run. In combination, these results demonstrate that the locking program provides some access to historical spawning habitat, although further improvements in fish passage could benefit both species.

North Carolina↗

USGS1987

Design of a spatial data structure using the relational normal forms

In previous work, a relational data structure aimed at the exchange of spatial data between systems was developed. As this data structure was relational it was of first normal form, but compliance with the higher normal forms was not investigated. Recently, a new procedural method for composing fully normalized data structures from the basic data fields has been developed by H. C. Smith, as an alternative to the process of non-loss decomposition which is difficult to understand. Smith's method has been applied to data fields required to store points, lines and polygons in a chain-node spatial data model. When geographic domain, coverage layer and map are also considered, the procedure naturally leads to a catalogue model, needed for the exchange of spatial data. Although the method produces a fully normalized data structure, it is not as easy to identify which normal forms are responsible for the ultimate arrangement of the data fields into relations, but the benefits of these criteria for data base development also apply to spatial data structures and related ancillary data.

International Journal of Geographical Information ↗

USGS2017

Isotopic structure of Lake Whitefish in Lake Huron: Evidence for regional and local populations based on resource use

Lake Whitefish Coregonus clupeaformis is the most commercially valuable species in Lake Huron. The fishery for this species has historically been managed based on 25 management units (17 in Canada, 8 in the USA). However, congruence between the contemporary population structure of Lake Whitefish and management units is poorly understood. We used stable isotopes of carbon (δ 13 C) and nitrogen (δ 15 N), food web markers that reflect patterns in resource use (i.e., prey, location, habitat), to assess the population structure of spawning-phase Lake Whitefish collected from 32 sites (1,474 fish) across Lake Huron. We found large isotopic variation among fish from different sites (ranges: δ 13 C = 10.2‰, δ 15 N = 5.5‰) and variable niche size and levels of overlap (standard ellipse area = 1.0–4.3‰ 2 ). Lake Huron contained spawning-phase fish from four major isotopic clusters largely defined by extensive variation in δ 13 C, and the isotopic composition of fish sampled was spatially structured both within and between lake basins. Based on cluster compositions, we identified six putative regional groups, some of which represented sites of high diversity (three to four clusters) and others with less (one to two clusters). Analysis of isotopic values from Lake Whitefish collected from summer feeding locations and baseline prey items showed similar isotopic variation and established spatial linkage between spawning-phase and summer fish. Our results show that summer feeding location contributes strongly to the isotopic structure we observed in spawning-phase fish. One of the regional groups we identified in northern Georgian Bay is highly distinct based on isotopic composition and possibly ecologically unique within Lake Huron. Our findings are congruent with several previous studies using different markers (genetics, mark–recapture), and we conclude that current management units are generally too small and numerous to reflect the population structure of Lake Whitefish in Lake Huron.

Lake Huron↗

USGS2026

Subsurface structure across the Tacoma Basin, Washington State, using trans-dimensional Bayesian inversion of fundamental mode spatial autocorrelation data

Spatial autocorrelation (SPAC), the azimuthal average of the normalized cross-correlation between equidistant station pairs deployed in a 2-D array, is widely used to image the subsurface structure. However, the rigorous estimate of subsurface structure and its uncertainties as a function of depth using SPAC data is challenging due to the nonlinear relation between the SPAC data and Earth structure as well as the trade-off between depth and velocity. Additionally, data noise is strongly correlated due to data processing (e.g. filtering, stacking from multiple time segments and azimuthal averaging). Most studies do not account for the correlated noise and fix the ratio of compressional-wave velocity ( V P ) to shear-wave velocity ( V s ) (i.e. V P / V s ratio) and the number of layers, both of which are typically unknown. To address these challenges, we develop a hierarchical trans-dimensional Bayesian inversion of fundamental mode of SPAC data that properly accounts for the correlated data noise, samples the V P / V s ratio and relaxes the number of layers (i.e. model parametrization) to be unknown in the inversion. We further examine the limitation of using only fundamental modes in the inversion. Our synthetic experiments show that the inversion recovers an incorrect model unless we sample the correlated noise and V P / V s ratio in the inversion. The inversion is then applied to SPAC data acquired at 19 sites across the Tacoma basin in Washington State to characterize the V s and the time-averaged V s over 30-m depth ( V s 30 ). Our results show that the V s 30 varies from ∼200 to 800 m s −1 . The V s 30 within the basin is higher in the middle and lower on the east and west sides. We find that these V s 30 values vary with geologic unit. The uncertainties for V s 30 are within 20 m s −1 in average except for the most eastern site TB28. Additionally, the uncertainties are greater for deeper depths beneath most of the sites as the sensitivity decreases as a function of depth. The Vs structure as a function of depth is also complex beneath some sites, possibly because the SPAC curves are affected by higher order Rayleigh modes that are not considered in the inversion. To better constrain the deeper V s structure, V s 30 and/or other average measures of V s over depth, additional constraints from complementary data, such as ellipticity or geologic data are needed. Moreover, our synthetic experiments show that higher order modes can have significant effect in the inversion results, particularly when there is a low-velocity layer.

Washington↗

USGS2024

Disentangling genetic diversity of Myotis septentrionalis: population structure, demographic history, and effective population size

Myotis septentrionalis (Northern Long-eared Bat) has recently suffered a >90% decline in population size in North America due to white-nose syndrome (WNS). We assessed genetic diversity, population structure, current effective population size, and demographic history of M. septentrionalis distributed across the United States to determine baseline levels pre-WNS. We analyzed RADseq data from 81 individuals from Kentucky, Louisiana, Michigan, Minnesota, North Carolina, Oklahoma, and Wisconsin. Additionally, we examined population genetic structure using discriminant analysis of principal components, fastStructure, and STRUCTURE. We then estimated effective population size and demographic history using fastsimcoal2. Similar levels of genetic diversity were found across all samples. We found no population genetic structure in the varied analyses from these contemporary samples. The best model for demographic history estimated a rapid population expansion followed by a slower expansion approximately 340,000 years ago. The vagility of M. septentrionalis , along with male dispersal and random mating, may provide a buffer against serious bottleneck effects stemming from rapid population declines due to WNS. This research provides a baseline for tracking and monitoring the influence of WNS on genetic diversity such as potential reduced diversity or increased population structuring in the future.

Kentucky, Louisiana, Michigan, Minnesota, North Ca↗

USGS2014

Modelling non-Euclidean movement and landscape connectivity in highly structured ecological networks

Movement is influenced by landscape structure, configuration and geometry, but measuring distance as perceived by animals poses technical and logistical challenges. Instead, movement is typically measured using Euclidean distance, irrespective of location or landscape structure, or is based on arbitrary cost surfaces. A recently proposed extension of spatial capture-recapture (SCR) models resolves this issue using spatial encounter histories of individuals to calculate least-cost paths (ecological distance: Ecology , 94 , 2013, 287) thereby relaxing the Euclidean assumption. We evaluate the consequences of not accounting for movement heterogeneity when estimating abundance in highly structured landscapes, and demonstrate the value of this approach for estimating biologically realistic space-use patterns and landscape connectivity. We simulated SCR data in a riparian habitat network, using the ecological distance model under a range of scenarios where space-use in and around the landscape was increasingly associated with water (i.e. increasingly less Euclidean). To assess the influence of miscalculating distance on estimates of population size, we compared the results from the ecological and Euclidean distance based models. We then demonstrate that the ecological distance model can be used to estimate home range geometry when space use is not symmetrical. Finally, we provide a method for calculating landscape connectivity based on modelled species-landscape interactions generated from capture-recapture data. Using ecological distance always produced unbiased estimates of abundance. Explicitly modelling the strength of the species-landscape interaction provided a direct measure of landscape connectivity and better characterised true home range geometry. Abundance under the Euclidean distance model was increasingly (negatively) biased as space use was more strongly associated with water and, because home ranges are assumed to be symmetrical, produced poor characterisations of home range geometry and no information about landscape connectivity. The ecological distance SCR model uses spatially indexed capture-recapture data to estimate how activity patterns are influenced by landscape structure. As well as reducing bias in estimates of abundance, this approach provides biologically realistic representations of home range geometry, and direct information about species-landscape interactions. The incorporation of both structural (landscape) and functional (movement) components of connectivity provides a direct measure of species-specific landscape connectivity.

Methods in Ecology and Evolution↗

USGS2024

Fish size structures in lakes of the Lower Mississippi River floodplain

The Lower Mississippi River has a floodplain that includes >1350 perennial lakes carved by shifts in river courses and other hydro-fluvial processes over eons. Notwithstanding their similar provenances, these waterbodies exhibit an immense variety of morphologies and successional stages that illustrate their natural trajectory from aquatic to forested wetlands. A result of this geographical, morphological and temporal diversity is dynamic and varied fish communities. We examined how size structures of fish communities in these floodplain lakes were associated with key in-lake and off-lake environmental drivers. Fish lengths were collected with standardised procedures in a sample of 30 of these lakes to construct a lake-by-length group matrix. Likewise, in-lake and off-lake environmental descriptors were collected to construct a lake-by-covariate matrix. Distance-based linear models were used to assess associations between fish size structure and environmental descriptors. Smaller fish were typically associated with increasing levels of turbidity, chlorophyll- a , phycocyanin and surrounding agriculture. Shallow, hypereutrophic floodplain lakes associated with agricultural landscapes and reduced connectivity experience harsh physicochemical environments. These conditions appeared to hinder the formation of sustained fish communities but may confer a survival advantage to juveniles or small short-lived species. Conversely, larger fish were associated with increasing lake depth, water clarity, connectivity, and extent of surrounding forests-wetlands. Enhanced stability and size structure were observed in communities residing in deeper and clearer lakes, suggesting that these conditions facilitated the development of longer-lived species spanning multiple age groups. The enhanced connectivity that facilitated this increased stability also permitted the presence of larger itinerant species. Size-structure assessments can serve as a valuable ecological and biodiversity indicator in floodplain lakes. Size-structure assessments could supplement and, depending on objectives, even supplant conventional taxonomic analyses, and enhance surveillance of this vast and important natural resource.

Arkansas, Louisiana, Mississippi, Missouri, Tennes↗

USGS2026

Genomics reveals extensive population structure and undescribed phylogenetic relationships in the Cascade torrent salamander (Rhyacotriton cascadae)

Aim Aims of the study are to examine patterns of range-wide genetic differentiation and population structure in a headwater obligate salamander living in a geologically rich region, to identify genetically distinct populations and areas of gene flow between them. Location Oregon and Washington in the Pacific Northwest, United States of America. Time Period Tissue samples were collected in 2022 and 2023. Major Taxa Studied The Cascade torrent salamander Rhyacotriton cascadae. Methods Utilisation of a genome-wide single nucleotide polymorphism (SNP) dataset from across the species range to conduct a principal components analysis (PCA), Bayesian model of population structure, co-ancestry matrix, phylogenetic tree and estimate genetic diversity. Results There are extensive levels of population structure within R. cascadae , including a previously unknown and highly differentiated clade. Structure is characterised by an island-like pattern wherein the species is comprised of six populations that function as independent demographic units, with gene flow largely constrained within populations. Main Conclusions Our findings reveal cryptic population structure within R. cascadae , identifying six distinct populations across the range. The northernmost population in the northwest of the species range in Washington is surprisingly highly divergent from the other five populations, and the divergence was not previously known to science. While major rivers act as phylogeographic boundaries between some populations, these boundaries appear to not always be complete.

Oregon, Washington↗