SEARCH · Geology Reports

Results for “Life Sciences”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

SourceResearch connectionFrom yearThrough year

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 235 records · Page 13Linked to original sources

USGS2016

The plant phenology monitoring design for the National Ecological Observatory Network

Phenology is an integrative science that comprises the study of recurring biological activities or events. In an era of rapidly changing climate, the relationship between the timing of those events and environmental cues such as temperature, snowmelt, water availability or day length are of particular interest. This article provides an overview of the plant phenology sampling which will be conducted by the U.S. National Ecological Observatory Network NEON, the resulting data, and the rationale behind the design. Trained technicians will conduct regular in situ observations of plant phenology at all terrestrial NEON sites for the 30-year life of the observatory. Standardized and coordinated data across the network of sites can be used to quantify the direction and magnitude of the relationships between phenology and environmental forcings, as well as the degree to which these relationships vary among sites, among species, among phenophases, and through time. Vegetation at NEON sites will also be monitored with tower-based cameras, satellite remote sensing and annual high-resolution airborne remote sensing. Ground-based measurements can be used to calibrate and improve satellite-derived phenometrics. NEON’s phenology monitoring design is complementary to existing phenology research efforts and citizen science initiatives throughout the world and will produce interoperable data. By collocating plant phenology observations with a suite of additional meteorological, biophysical and ecological measurements (e.g., climate, carbon flux, plant productivity, population dynamics of consumers) at 47 terrestrial sites, the NEON design will enable continentalscale inference about the status, trends, causes and ecological consequences of phenological change.

Ecosphere↗

USGS2013

Fire history, effects and management in southern Nevada

Fire can be both an ecosystem stressor (Chapter 2) and a critical ecosystem process, depending on when, where, and under what conditions it occurs on the southern Nevada landscape. Fire can also pose hazards to human life and property, particularly in the wildland/urban interface (WUI). The challenge faced by land managers is to prevent fires from occurring where they are likely to threaten ecosystem integrity or human developments, while allowing fires to occur where they will provide ecosystem benefits. The Southern Nevada Agency Partnership (SNAP) Science and Research Strategy summarizes this desired outcome with Sub-goal 1.1, which is to manage wildland fire to sustain Southern Nevada’s ecosystems (table 1.3; Chapter 1). This chapter provides information that will help land managers develop strategies to achieve this goal. It begins with a background section on fire history, spatial and temporal patterns of fire, and fire effects for the major ecosystem types of southern Nevada, (table 1.1; Chapter 1). Potential fire management actions are then discussed, the overall implications of the information to fire management are summarized, and the major knowledge gaps are described.

Nevada↗

USGS2000

U.S. Geological Survey Information Sources

As the nation's largest water, earth and biological science and civilian mapping agency, the U.S. Geological Survey (USGS) works in cooperation with more than 2000 organizations across the country to provide reliable, impartial, scientific information to resource managers, planners, and other customers. This information is gathered in every state by USGS scientists to minimize the loss of life and property from natural disasters, to contribute to the conservation and the sound economic and physical development of the nation's natural resources, and to enhance the quality of life by monitoring water, biological, energy and mineral resources.

Fact Sheet↗

USGS2023

Status and trends of the Lake Huron prey fish community, 1976-2022

The United States Geological Survey-Great Lakes Science Center has monitored annual changes in the offshore prey fish community of Lake Huron since 1973. Monitoring of prey fish populations in Lake Huron is based on a bottom trawl survey that targets demersal (benthic) species and an acoustic-midwater trawl survey that targets pelagic species and life stages. Status of the main basin prey fish community in 2022 was considered ‘Fair’ due to sustained improvements in native species status but species diversity that remains below desired levels. Current lake conditions, characterized by ongoing oligotrophication, seem to favor native coregonines like Bloater ( Coregonus artedi ), which in the main basin has exhibited signs of population growth and strong recruitment in recent years, and Cisco ( Coregonus artedi ), whose biomass in the North Channel increased for the second consecutive year in 2022. In contrast, conditions in the main basin are less favorable for exotic prey fish such as Alewife ( Alosa pseudoharengus ), whose population collapsed in 2014 and has not recovered, and Rainbow Smelt ( Osmerus mordax ), which remains the second-most abundant prey species in the main basin but has produced multiple weak year classes over the past decade including in 2022. Status of benthic prey fish in the main basin in 2022 depended on species. As in prior years, the native sculpin community in 2022 consisted primarily of Deepwater Sculpin ( Myoxocephalus thompsoni ) because Slimy Sculpin ( Cottus cognatus ) has become exceedingly rare. In contrast, biomass of the ecologically similar Round Goby ( Neogobius melanostomus ), an exotic species, reached an all-time high in 2022. Use of complementary surveys (bottom trawl, acoustics) remains important for evaluating prey fish status in Lake Huron, where prey fish community dynamics vary by basin and prey fish responses to changing environmental conditions depend on species and/or habitat.

Lake Huron↗

USGS2012

An algal model for predicting attainment of tiered biological criteria of Maine's streams and rivers

State water-quality professionals developing new biological assessment methods often have difficulty relating assessment results to narrative criteria in water-quality standards. An alternative to selecting index thresholds arbitrarily is to include the Biological Condition Gradient (BCG) in the development of the assessment method. The BCG describes tiers of biological community condition to help identify and communicate the position of a water body along a gradient of water quality ranging from natural to degraded. Although originally developed for fish and macroinvertebrate communities of streams and rivers, the BCG is easily adapted to other habitats and taxonomic groups. We developed a discriminant analysis model with stream algal data to predict attainment of tiered aquatic-life uses in Maine's water-quality standards. We modified the BCG framework for Maine stream algae, related the BCG tiers to Maine's tiered aquatic-life uses, and identified appropriate algal metrics for describing BCG tiers. Using a modified Delphi method, 5 aquatic biologists independently evaluated algal community metrics for 230 samples from streams and rivers across the state and assigned a BCG tier (1–6) and Maine water quality class (AA/A, B, C, nonattainment of any class) to each sample. We used minimally disturbed reference sites to approximate natural conditions (Tier 1). Biologist class assignments were unanimous for 53% of samples, and 42% of samples differed by 1 class. The biologists debated and developed consensus class assignments. A linear discriminant model built to replicate a priori class assignments correctly classified 95% of 150 samples in the model training set and 91% of 80 samples in the model validation set. Locally derived metrics based on BCG taxon tolerance groupings (e.g., sensitive, intermediate, tolerant) were more effective than were metrics developed in other regions. Adding the algal discriminant model to Maine's existing macroinvertebrate discriminant model will broaden detection of biological impairment and further diagnose sources of impairment. The algal discriminant model is specific to Maine, but our approach of explicitly tying an assessment tool to tiered aquatic-life goals is widely transferrable to other regions, taxonomic groups, and waterbody types.

Freshwater Science↗

USGS2001

U.S. Geological Survey Information Sources

As the Nation's largest water, earth, and biological science and civilian mapping agency, the U.S. Geological Survey (USGS) works in cooperation with more than 2,000 organizations across the country to provide reliable, impartial scientific information to resource managers, planners, and other customers. This information is gathered in every State by USGS scientists to minimize the loss of life and property from natural disasters, to contribute to the conservation and the sound economic and physical development of the Nation's natural resources, and to enhance the quality of life by monitoring water, biological, energy, and mineral resources

Fact Sheet↗

USGS2023

Characteristics of a sea louse (Caligus clemensi) epizootic in wild Pacific herring (Clupea pallasii)

We characterized a natural sea louse epizootic of Caligus clemensi and the effects of parasitism on Pacific herring Clupea pallasii in Port Angeles Harbor, WA, USA. Infestation prevalence on newly metamorphosed age 0 Pacific herring reached 100% prevalence by mid-August. At this time, the mean louse intensity was 4.6 lice/fish, and a positive correlation occurred between louse intensity and herring body length. The epizootic then waned, with infestation prevalence decreasing to less than 25% and the mean parasite intensity falling below 1 louse. While skin injuries were not detected, motile lice preferentially aggregated around head and anterior dorsal areas. However, louse tropism became evenly distributed over the body as the parasite intensity increased. Louse-induced mortality in herring was negligible in controlled experiments. These results indicate that Caligus clemensi epizootics reach high prevalence, but also fade from mid-summer to early fall. Due to the predominant presence of motile copepod stages, we suggest that the epizootic fades because lice complete their life cycle and dislodge from the host; however, multiple explanations for epidemic fading are possible.

Washington↗

USGS2010

Environmental drivers of fish functional diversity and composition in the Lower Colorado River Basin

Freshwater conservation efforts require an understanding of how natural and anthropogenic factors shape the present-day biogeography of native and non-native species. This knowledge need is especially acute for imperiled native fishes in the highly modified Lower Colorado River Basin (LCRB), USA. In the present study we employed both a taxonomic and functional approach to explore how natural and human-related environmental drivers shape landscape-scale patterns of fish community composition in the LCRB. Our results showed that hydrologic alteration, watershed land use, and regional climate explained 30.3% and 44.7% of the total variation in fish community taxonomic and functional composition, respectively. Watersheds with greater dam densities and upstream storage capacity supported higher non-native functional diversity, suggesting that dams have provided additional "niche opportunities" for non-native equilibrium life-history strategists by introducing new reservoir habitat and modifying downstream flow and thermal regimes. By contrast, watersheds characterized by greater upstream land protection, lower dam densities, and higher variation in spring and summer precipitation supported fish communities with a strong complement of native species (opportunistic-periodic strategists). In conclusion, our study highlights the utility of a life-history approach to better understand the patterns and processes by which fish communities vary along environmental gradients.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2024

Status and trends of the Lake Huron prey fish community, 1976-2023

The U. S. Geological Survey-Great Lakes Science Center has monitored annual changes in the offshore (depth >9m) prey fish community of Lake Huron since 1973. Monitoring of prey fish populations in Lake Huron is based on a bottom trawl survey that targets demersal (benthic) species and an acoustic-midwater trawl survey that targets pelagic species and life stages. In 2023, Bloater ( Coregonus hoyi ) accounted for 77% of the main basin biomass in bottom trawls and 86% of the main basin biomass in the acoustics survey. Despite this sustained importance of native species in the main basin, species diversity is below desired levels. Bloater in the main basin has exhibited population growth and strong recruitment in recent years, and Cisco ( Coregonus artedi ) has exhibited increased biomass in the North Channel since 2015. In contrast non-native Alewife ( Alosa pseudoharengus ), whose population collapsed in 2004 and has not recovered, were less than 1% of fish biomass in 2023. Rainbow Smelt ( Osmerus mordax ) accounted for 7% of the main basin biomass in bottom trawls and 22% of the main basin biomass in the acoustics survey. Despite remaining the second-most abundant prey species in the main basin, Rainbow Smelt has not shown appreciable increases in biomass despite recent strong year classes. Deepwater Sculpin ( Myoxocephalus thompsonii ) increased by 47% in 2023 and were 33% of the long-term average. Slimy Sculpin ( Cottus cognatus ) increased to 60% of the long-term average but remained rare in bottom trawl catches. In contrast, biomass of Round Goby ( Neogobius melanostomus ), a non-native species similar ecologically to the sculpin species, remained near the record high biomass reached in 2022. Current lake conditions characterized by ongoing oligotrophication seem to favor native coregonines over non-native fishes. Use of complementary surveys (bottom trawl, acoustics) remains important for evaluating prey fish status in Lake Huron, where prey fish community dynamics vary by basin and prey fish responses to changing environmental conditions depend on species and/or habitat.

Lake Huron↗

USGS2013

Emergence flux declines disproportionately to larval density along a stream metals gradient

Effects of contaminants on adult aquatic insect emergence are less well understood than effects on insect larvae. We compared responses of larval density and adult emergence along a metal contamination gradient. Nonlinear threshold responses were generally observed for larvae and emergers. Larval densities decreased significantly at low metal concentrations but precipitously at concentrations of metal mixtures above aquatic life criteria (Cumulative Criterion Accumulation Ratio (CCAR) ≥ 1). In contrast, adult emergence declined precipitously at low metal concentrations (CCAR ≤ 1), followed by a modest decline above this threshold. Adult emergence was a more sensitive indicator of the effect of low metals concentrations on aquatic insect communities compared to larvae, presumably because emergence is limited by a combination of larval survival and other factors limiting successful emergence. Thus effects of exposure to larvae are not manifest until later in life (during metamorphosis and emergence). This loss in emergence reduces prey subsidies to riparian communities at concentrations considered safe for aquatic life. Our results also challenge the widely held assumption that adult emergence is a constant proportion of larval densities in all streams.

Environmental Science & Technology↗

USGS2003

Biogeochemical sulphur cycle in an extreme environment - Life beneath a high arctic glacier, Nunavut, Canada

Unique springs discharge from the surface of a high arctic glacier, releasing H2S, and depositing native sulphur, gypsum, and calcite. A rare CaCO3 polymorph, vaterite, is also observed. Physical and chemical conditions of the spring water and surrounding environment, as well as mineralogical and isotopic signatures, argue for biologically mediated redox reactions controlling sulfur. Cell counts and DNA analyses, confirm bacteria are present in the spring system. ?? 2003 Elsevier Science B.V. All rights reserved.

Conference Paper↗

USGS2013

Differences in extreme low salinity timing and duration differentially affect eastern oyster ( Crassostrea virginica ) size class growth and mortality in Breton Sound, LA

Understanding how different life history stages are impacted by extreme or stochastic environmental variation is critical for predicting and modeling organism population dynamics. This project examined recruitment, growth, and mortality of seed (25–75 mm) and market (>75 mm) sized oysters along a salinity gradient over two years in Breton Sound, LA. In April 2010, management responses to the Deepwater Horizon oil spill resulted in extreme low salinity (<5) at all sites through August 2010; in 2011, a 100-year Mississippi River flood event resulted in low salinity in late spring. Extended low salinity (<5) during hot summer months (>25 °C) significantly and negatively impacted oyster recruitment, survival and growth in 2010, while low salinity (<5) for a shorter period that did not extend into July (<25 °C) in 2011 had minimal impacts on oyster growth and mortality. In 2011, recruitment was limited, which may be due to a combination of low spring time salinities, high 2010 oyster mortality, minimal 2010 recruitment, cumulative effects from 10 years of declining oyster stock in the area, and poor cultch quality. In both 2010 and 2011, Perkinsus marinus infection prevalence remained low throughout the year at all sites and almost all infection intensities were light. Oyster plasma osmolality failed to match surrounding low salinity waters in 2010, while oysters appeared to osmoconform throughout 2011 indicating that the high mortality in 2010 may be due to extended valve closing and resulting starvation or asphyxiation in response to the combination of low salinity during high temperatures (>25 °C). With increasing management of our freshwater inputs to estuaries combined with predicted climate changes, how extreme events affect different life history stages is key to understanding variation in population demographics of commercially important species and predicting future populations.

Louisiana↗

USGS2026

Riverine pesticide trends in the United States: Assessing a decade of national-scale monitoring

Pesticides in freshwater systems can compromise water availability by degrading water quality, with implications for human health and aquatic life. Despite recognition of the need for national-scale monitoring and analysis, few studies have documented long-term trends in surface water pesticide contamination across the US. This study addresses that need by analyzing temporal trends and acute and chronic benchmark exceedances for aquatic life and human health from 81 river sites sampled from 2013 to 2022 using an analytical method targeting 80 pesticides. The majority (79%) of single site and pesticide combinations had too few pesticide detections to estimate trends. When detections were more frequent, increasing trends in concentration were twice as common as decreasing trends. Increasing pesticide concentrations were common in primary drainages of the Mississippi River Basin. Aquatic life benchmarks were exceeded by 19 pesticides, and exceedances were geographically widespread, with both acute and chronic aquatic life benchmark exceedances at 62% of sites. The herbicides atrazine and metolachlor and the insecticide imidacloprid were identified as the greatest threats to surface water availability based on their trends and aquatic life benchmark exceedances. These findings demonstrate the need for continued monitoring and trend analysis, driver investigation, and management strategies to protect freshwater resources.

conterminous United States↗

USGS2025

Variation in energetic balance among free-ranging polar bears during the spring mating and foraging season

Large carnivores are capable of consuming substantial biomasses that can significantly alter their body mass and condition over short periods. Here we examine the intra-seasonal variation of polar bear ( Ursus maritimus Phipps, 1774) body mass, energy intake, and condition in the spring from two subpopulations. We evaluate the biological and temporal factors that may have driven changes in body mass of 31 individuals captured and recaptured over 2–39 days and assess whether these changes influenced their estimated condition. Body mass changed by –61 to 33 kg ( = –2 kg) with bears exhibiting increases in mass with increasing age and decreases with greater initial mass. On average, estimated intake was 57 MJ/day. Estimated daily mass-specific body mass changes exhibited greater variation relative to previous measures in polar bears or brown bears ( U. arctos Linnaeus, 1758). Yet, across all bears, measures of condition remained similar between captures. The marked variation in mass gains or losses highlights the varying behavioral and physiological limitations that influence foraging success within this apex carnivore during a season when two key life history events converge wherein feeding is often reduced during mating activities despite the importance of the spring hyperphagia period to long-term energy balance.

Lancaster Sound, southern Beaufort Sea↗

USGS2010

Challenges in merging fisheries research and management: The Upper Mississippi River experience

The Upper Mississippi River System (UMRS) is a geographically diverse basin extending 10?? north temperate latitude that has produced fishes for humans for millennia. During European colonization through the present, the UMRS has been modified to meet multiple demands such as navigation and flood control. Invasive species, notably the common carp, have dominated fisheries in both positive and negative ways. Through time, environmental decline plus reduced economic incentives have degraded opportunities for fishery production. A renewed focus on fisheries in the UMRS may be dawning. Commercial harvest and corresponding economic value of native and non-native species along the river corridor fluctuates but appears to be increasing. Recreational use will depend on access and societal perceptions of the river. Interactions (e. g., disease and invasive species transmission) among fish assemblages within the UMRS, the Great Lakes, and other lakes and rivers are rising. Data collection for fisheries has varied in intensity and contiguousness through time, although resources for research and management may be growing. As fisheries production likely relies on the interconnectivity of fish populations and associated ecosystem processes among river reaches (e. g., between the pooled and unpooled UMRS), species-level processes such as genetics, life-history interactions, and migratory behavior need to be placed in the context of broad ecosystem- and landscape-scale restoration. Formal communication among a diverse group of researchers, managers, and public stakeholders crossing geographic and disciplinary boundaries is necessary through peer-reviewed publications, moderated interactions, and the embrace of emerging information technologies. ?? Springer Science+Business Media B.V. 2010.

Hydrobiologia↗

USGS2009

The effect of Hurricane Katrina on nekton communities in the tidal freshwater marshes of Breton Sound, Louisiana, USA

Hurricanes are climatically-induced resource pulses that affect community structure through the combination of physical and chemical habitat change. Estuaries are susceptible to hurricane pulses and are thought to be resilient to habitat change, because biotic communities often return quickly to pre-hurricane conditions. Although several examples provide evidence of quick recovery of estuarine nekton communities following a hurricane, few studies take place in tidal freshwater habitat where physical habitat effects can be extensive and may not be readily mitigated. We examined nekton communities (density, biomass, ?? and ?? diversity, % occurrence by residence status) in tidal freshwater marshes in Breton Sound, Louisiana, before and after a direct hit by Hurricane Katrina (2005). Vegetative marsh loss in the study area was extensive, and elevated salinity persisted for almost 6 months. Post-Katrina nekton density and biomass increased significantly, and the nekton community shifted from one of tidal freshwater/resident species to one containing brackish/migrant species, many of which are characterized by pelagic and benthic life history strategies. By spring 2007, the nekton community had shifted back to tidal freshwater/resident species, despite the enduring loss of vegetated marsh habitat. ?? 2009 Elsevier Ltd.

Estuarine, Coastal and Shelf Science↗

USGS2022

Rock-to-metal ratio: A foundational metric for understanding mine wastes

The quantity of ore mined and waste rock (i.e., overburden or barren rock) removed to produce a refined unit of a mineral commodity, its rock-to-metal ratio (RMR), is an important metric for understanding mine wastes and environmental burdens. In this analysis, we provide a comprehensive examination of RMRs for 25 commodities for 2018. The results indicate significant variability across commodities. Precious metals like gold have RMRs in the range of 10 5 –10 6 , while iron ore and aluminum are on the order of 10 1 . The results also indicate significant variability across operations for a single commodity. The interquartile range of RMRs for individual cobalt operations, for example, varies from 465 to 2157, with a global RMR of 859. RMR variability is mainly driven by ore grades and revenue contribution. The total attributable ore mined and waste rock removed in the production of these 25 commodities sums to 37.6 billion metric tons, 83% of which is attributable to iron ore, copper, and gold. RMRs provide an additional dimension for evaluating the impact of materials and material choice trade-offs. The results can enhance life cycle inventories and be extended to evaluate areas of surface disturbances, mine tailings, energy requirements, and associated greenhouse gas emissions.

Environmental Science & Technology↗

USGS2023

Bifenthrin, a ubiquitous contaminant, impairs the development and behavior of the threatened Longfin Smelt during early life stages

The Longfin Smelt ( Spirinchus thaleichthys ) population in the San Franscisco Bay/Sacramento-San Joaquin Delta (Bay-Delta) has declined to ∼1% of its pre-1980s abundance and, as a result, is listed as threatened under the California Endangered Species Act. The reasons for this decline are multiple and complex, including the impacts of contaminants. Because the spawning and rearing seasons of Longfin Smelt coincide with the rainy season, during which concentrations of contaminants increase due to runoff, we hypothesized that early life stages may be particularly affected by those contaminants. Bifenthrin, a pyrethroid insecticide commonly used in agricultural and urban sectors, is of concern. Concentrations measured in the Bay-Delta have been shown to disrupt the behavior, development, and endocrine system of other fish species. The objective of the present work was to assess the impact of bifenthrin on the early developmental stages of Longfin Smelt. For this, embryos were exposed to 2, 10, 100, and 500 ng/L bifenthrin from fertilization to hatch, and larvae were exposed to 2, 10, and 100 ng/L bifenthrin from one day before to 3 days post-hatch. We assessed effects on size at hatch, yolk sac volume, locomotory behavior, and upper thermal susceptibility (via cardiac endpoints). Exposure to these environmentally relevant concentrations of bifenthrin did not significantly affect the cardiac function of larval Longfin Smelt; however, exposures altered their behavior and resulted in smaller hatchlings with reduced yolk sac volumes. This study shows that bifenthrin affects the fitness-determinant traits of Longfin Smelt early life stages and could contribute to the observed population decline.

Environmental Science and Technology↗