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At least 235 records · Page 13Linked to original sources
USGS2015

Comparing spatial capture–recapture modeling and nest count methods to estimate orangutan densities in the Wehea Forest, East Kalimantan, Indonesia

Accurate information on the density and abundance of animal populations is essential for understanding species' ecology and for conservation planning, but is difficult to obtain. The endangered orangutan ( Pongo spp.) is an example; due to its elusive behavior and low densities, researchers have relied on methods that convert nest counts to orangutan densities and require substantial effort for reliable results. Camera trapping and spatial capture–recapture (SCR) models could provide an alternative but have not been used for primates. We compared density estimates calculated using the two methods for orangutans in the Wehea Forest, East Kalimantan, Indonesia. Camera trapping/SCR modeling produced a density estimate of 0.16 ± 0.09–0.29 indiv/km 2 , and nest counts produced a density estimate of 1.05 ± 0.18–6.01 indiv/km 2 . The large confidence interval of the nest count estimate is probably due to high variance in nest encounter rates, indicating the need for larger sample size and the substantial effort required to produce reliable results using this method. The SCR estimate produced a very low density estimate and had a narrower but still fairly wide confidence interval. This was likely due to unmodeled heterogeneity and small sample size, specifically a low number of individual captures and recaptures. We propose methodological fixes that could address these issues and improve precision. A comparison of the overall costs and benefits of the two methods suggests that camera trapping/SCR modeling can potentially be a useful tool for assessing the densities of orangutans and other elusive primates, and warrant further investigation to determine broad applicability and methodological adjustments needed.

East Kalimantan↗
USGS2019

A seasonal population matrix model of the Caribbean Red-tailed Hawk Buteo jamaicensis jamaicensis in eastern Puerto Rico

Reliable estimates of life history parameters and their functional role in animal population trajectories are critical, yet often missing, components in conservation and management. We developed seasonal matrix population models of the Red-tailed Hawk Buteo jamaicensis jamaicensis in the upper and lower forests of the Luquillo Mountains, Puerto Rico, to describe the influence of early life stages (nestling and clutch survival) on population growth. Modelled populations exhibited positive discrete rates of growth in forests above 400 m ( λ highlands = 1.05) and in forests below 400 m ( λ lowlands = 1.27) of the Luquillo Mountains. Further, adult survival was the parameter with the highest proportional effect and direct contribution to growth of the population. Besides survival of adults, our results identified that nestling survival had the second greatest influence on λ , stressing the importance of this life stage for the population growth rate of Red-tailed Hawks in our study area. Seasonal matrices are not commonly used to describe population dynamics of birds. However, these may be a useful tool to analyse the influence of life stages in the annual cycle to better address conservation and management needs, especially for species inhabiting oceanic islands.

Puerto Rico↗
USGS2017

Temporospatial dynamics and public health significance of bacterial flora identified on a major leatherback turtle (Dermochelys coriacea) nesting beach in the Southern Caribbean

Grande Riviere beach, on the island of Trinidad, supports the largest nesting population of leatherback turtles in the Caribbean region. Throughout the nesting season, nests are naturally disturbed by newly nesting females, resulting in egg breakage and loss of some nest viability. This environment is ideal for the growth and proliferation of microorganisms. The range of bacterial flora present in beach sand and egg shells was examined, with emphasis on bacteria that may pose a threat to public and animal health. The extent to which the bacterial load and genera on the beach changed throughout the season was also assessed. Twenty-five genera were identified, with Pseudomonas spp. found to be the most predominant environmental bacteria. Four genera identified possess zoonotic potential, while five additional genera are known to be of public and animal health significance. Distinct shifts in the density and distribution of bacteria were observed along the beach from early to peak nesting season. Shifts were seen across heavily traversed zones, thus highlighting the potential exposure threats posed to beach visitors and animals alike. Further studies aimed at speciating this population of bacteria, as well as isolating potential fungal pathogens may mitigate this threat. Identification of bacterial agents that are specifically pathogenic to leatherback turtles, turtle eggs, hatchlings and those who may interact with these animals will serve to enhance and guide efforts to better conserve this species and protect the health of all who visit this ecologically significant site.

Grande Riviere beach↗
USGS2018

A spatial approach to combatting wildlife crime

Poaching can have devastating impacts on animal and plant numbers, and in many countries has reached crisis levels, with illegal hunters employing increasingly sophisticated techniques. Here, we show how geographic profiling – a mathematical technique originally developed in criminology and recently applied to animal foraging and epidemiology – can be adapted for use in investigations of wildlife crime, using data from an eight-year study in Savé Valley Conservancy, Zimbabwe that in total includes more than 10,000 incidents of illegal hunting and the deaths of 6,454 wild animals. Using a subset of these data for which the illegal hunters’ identities are known, we show that the model can successfully identify the illegal hunters’ home villages using the spatial locations of hunting incidences (for example, snares) as input, and show how this can be improved by manipulating the probability surface inside the Conservancy to reflect the fact that – although the illegal hunters mostly live outside the Conservancy, the majority of hunting occurs inside (in criminology, ‘commuter crime’). The results of this analysis – combined with rigorous simulations – show for the first time how geographic profiling can be combined with GIS data and applied to situations with more complex spatial patterns – for example, where landscape heterogeneity means that some parts of the study area are unsuitable (e.g. aquatic areas for terrestrial animals, or vice versa), or where landscape permeability differs (for example, forest bats tending not to fly over open areas). More broadly, these results show how geographic profiling can be used to target anti-poaching interventions more effectively and more efficiently, with important implications for the development of management strategies and conservation plans in a range of conservation scenarios.

Conservation Biology↗
USGS2024

Resource availability and heterogeneity affect space use and resource selection of a feral ungulate

Animals adjust their habitat use patterns in response to changes in their physiological needs and environmental conditions. Understanding the mechanisms underlying resource selection and space use across time and space reveals effects of the environment on animals' decisions. We explored the effects of habitat availability and heterogeneity on the seasonal and annual space use and resource selection of two free-roaming feral burro ( Equus asinus ) populations in the United States within distinct climate and habitat conditions: the Sonoran Desert and the Colorado Plateau. As an introduced yet protected species in the United States, understanding burros' interactions with habitat elements is important for their conservation and management, as well as the conservation of sympatric wildlife. We used GPS locations of female burros (72 animals across both study areas) to delineate annual and seasonal ranges and resource selection patterns. We evaluated effects of mean and CV of habitat covariates, including forage, distance to water, and topography, representing availability and heterogeneity of resources, on seasonal and annual range size of burros. Moreover, we explored how burro seasonal and annual resource selection patterns were affected by availability and heterogeneity of resources. In the Sonoran Desert study area, burros had smaller seasonal and annual ranges and constant resource selection patterns across a year, likely due to a freshwater lake in the area, making water a nonlimiting resource. Human presence was the greatest factor affecting range size and resource selection in the Sonoran Desert, where burros selected for areas near roads and human recreation. In the Colorado Plateau study area, where resources were more seasonal, we found larger range sizes and fluctuating resource selection patterns compared to the Sonoran Desert population. Spatial variation in forage, water, and topography significantly affected range size of burros inhabiting the Colorado Plateau study area. Productive habitats with available water support smaller ranges and a more consistent pattern of resource selection. Our results highlight the positive effect of habitat heterogeneity and the negative effect of habitat productivity on range size of animals. Our findings contribute to an improved understanding of habitat requirements for free-roaming burros that currently live under various climate and habitat conditions globally.

Arizona, Utah↗
USGS2017

State-dependent behavior alters endocrine–energy relationship: Implications for conservation and management

Glucocorticoids (GC) and triiodothyronine (T3) are two endocrine markers commonly used to quantify resource limitation, yet the relationships between these markers and the energetic state of animals has been studied primarily in small-bodied species in captivity. Free-ranging animals, however, adjust energy intake in accordance with their energy reserves, a behavior known as state-dependent foraging. Further, links between life-history strategies and metabolic allometries cause energy intake and energy reserves to be more strongly coupled in small animals relative to large animals. Because GC and T3 may reflect energy intake or energy reserves, state-dependent foraging and body size may cause endocrine–energy relationships to vary among taxa and environments. To extend the utility of endocrine markers to large-bodied, free-ranging animals, we evaluated how state-dependent foraging, energy reserves, and energy intake influenced fecal GC and fecal T3 concentrations in free-ranging moose ( Alces alces ). Compared with individuals possessing abundant energy reserves, individuals with few energy reserves had higher energy intake and high fecal T3 concentrations, thereby supporting state-dependent foraging. Although fecal GC did not vary strongly with energy reserves, individuals with higher fecal GC tended to have fewer energy reserves and substantially greater energy intake than those with low fecal GC. Consequently, individuals with greater energy intake had both high fecal T3 and high fecal GC concentrations, a pattern inconsistent with previous documentation from captive animal studies. We posit that a positive relationship between GC and T3 may be expected in animals exhibiting state-dependent foraging if GC is associated with increased foraging and energy intake. Thus, we recommend that additional investigations of GC– and T3–energy relationships be conducted in free-ranging animals across a diversity of body size and life-history strategies before these endocrine markers are applied broadly to wildlife conservation and management.

Wyoming↗
USGS2019

Applying circuit theory and landscape linkage maps to reintroduction planning for California condors

Conservation practitioners are increasingly looking to species translocations as a tool to recover imperiled taxa. Quantitative predictions of where animals are likely to move when released into new areas would allow managers to better address the social, institutional, and ecological dimensions of conservation translocations. Using >5 million California condor ( Gymnogyps californianus ) occurrence locations from 75 individuals, we developed and tested circuit-based models to predict condor movement away from release sites. We found that circuit-based models of electrical current were well calibrated to the distribution of condor movement data in southern and central California (continuous Boyce Index = 0.86 and 0.98, respectively). Model calibration was improved in southern California when additional nodes were added to the circuit to account for nesting and feeding areas, where condor movement densities were higher (continuous Boyce Index = 0.95). Circuit-based projections of electrical current around a proposed release site in northern California comported with the condor’s historical distribution and revealed that, initially, condor movements would likely be most concentrated in northwestern California and southwest Oregon. Landscape linkage maps, which incorporate information on landscape resistance, complement circuit-based models and aid in the identification of specific avenues for population connectivity or areas where movement between populations may be constrained. We found landscape linkages in the Coast Range and the Sierra Nevada provided the most connectivity to a proposed reintroduction site in northern California. Our methods are applicable to conservation translocations for other species and are flexible, allowing researchers to develop multiple competing hypotheses when there are uncertainties about landscape or social attractants, or uncertainties in the landscape conductance surface.

Central California↗
USGS2019

Captive-rearing duration may be more important than environmental enrichment for enhancing turtle head-starting success

Raising captive animals past critical mortality stages for eventual release (head-starting) is a common conservation tactic. Counterintuitively, post-release survival can be low. Post-release behavior affecting survival could be influenced by captive-rearing duration and housing conditions. Practitioners have adopted environmental enrichment to promote natural behaviors during head-starting such as raising animals in naturalistic enclosures. Enrichment might be especially beneficial for animals held in captivity long-term to prevent degradation of adaptive behaviors. Using 32 captive-born turtles ( Terrapene carolina ), half of which were raised in enriched enclosures, we employed a factorial design to explore how enrichment and rearing duration affected post-release growth, behavior, and survival. Six turtles in each treatment (enriched or unenriched) were head-started for nine months (cohort one). Ten turtles in each treatment were head-started for 21 months (cohort two). At the conclusion of captive-rearing, turtles in cohort two were overall larger than cohort one, but unenriched turtles were generally larger than enriched turtles within each cohort. Once released, enriched turtles grew faster than unenriched turtles in cohort two, but we otherwise found minimal evidence suggesting enrichment affected post-release survival or behavior. Cohort two dispersed farther and had generally higher active season survival than cohort one (0.50 vs. 0.33). Body mass was positively associated with daily survival probability. Our findings suggest attaining larger body sizes from longer captive-rearing periods to enable greater movement and alleviate susceptibility to predation (the primary cause of death) could be more effective than environmental enrichment alone in chelonian head-starting programs where substantial predation could hinder success.

Global Ecology and Conservation↗
USGS2022

Considering behavioral state when predicting habitat use: Behavior-specific spatial models for the endangered Tasmanian wedge-tailed eagle

Effective planning for species conservation often requires an understanding of habitat use. The resources an animal selects within the landscape relate to its behavioral state and, therefore, incorporating behavior into habitat selection analyses can help inform management of threatened species. Here we present an approach for developing behavior-specific spatial habitat-use models using large quantities of GPS telemetry data. Using hidden Markov models, we first characterize 231,478 GPS fixes from 22 recently fledged endangered Tasmanian wedge-tailed eagles ( Aquila audax fleayi ) as reflective of either perching, short-distance flight, or long-distance flight. We then use a multivariate habitat selection ratio to develop spatial models predicting where these behavioral states occur. Recently fledged Tasmanian wedge-tailed eagles selected for areas close to forest edges during perching and short distance flights, whereas they selected more strongly for areas with steep topography (slopes > 15°) and further from forest edges for longer flights. Models using distance to forest edge and topographic slope effectively predicted where eagles engaged in long flights ( R 2 > 0.91, r s > 0.90) in each of six regions, whereas the performance varied by region for models describing perching ( R 2 = 0.43–0.97, r s = 0.80–0.97) and short flights ( R 2 = 0.34–0.93, r s = 0.63–1.00). Our study provides a detailed understanding of habitat use by young Tasmanian wedge-tailed eagles, which has multiple applications in the ongoing conservation of the population. Our method illustrates a framework for spatially explicit and behavior-specific habitat selection analyses that can be applied to other species of conservation concern.

Tasmania↗
USGS2018

Using spatially‐explicit capture–recapture models to explain variation in seasonal density patterns of sympatric ursids

Understanding how environmental factors interact to determine the abundance and distribution of animals is a primary goal of ecology, and fundamental to the conservation of wildlife populations. Studies of these relationships, however, often assume static environmental conditions, and rarely consider effects of competition with ecologically similar species. In many parts of their shared ranges, grizzly bears Ursus arctos and American black bears U. americanus have nearly complete dietary overlap and share similar life history traits. We therefore tested the hypothesis that density patterns of both bear species would reflect seasonal variation in available resources, with areas of higher primary productivity supporting higher densities of both species. We also hypothesized that interspecific competition would influence seasonal density patterns. Specifically, we predicted that grizzly bear density would be locally reduced due to the ability of black bears to more efficiently exploit patchy food resources such as seasonally abundant fruits. To test our hypotheses, we used detections of 309 grizzly and 597 black bears from two independent genetic sampling methods in spatially‐explicit capture–recapture (SECR) models. Our results suggest grizzly bear density was lower in areas of high black bear density during spring and summer, although intraspecific densities were also important, particularly during the breeding season. Black bears had lower densities in areas of high grizzly bear density in spring; however, density of black bears in early and late summer was best explained by primary productivity. Our results are consistent with the hypothesis that smaller‐bodied, more abundant black bears may influence the density patterns of behaviorally‐dominant grizzly bears through exploitative competition. We also suggest that seasonal variation in resource availability be considered in efforts to relate environmental conditions to animal density.

Montana↗
USGS2013

Tracking animals in freshwater with electronic tags: past, present and future

Considerable technical developments over the past half century have enabled widespread application of electronic tags to the study of animals in the wild, including in freshwater environments. We review the constraints associated with freshwater telemetry and biologging and the technical developments relevant to their use. Technical constraints for tracking animals are often influenced by the characteristics of the animals being studied and the environment they inhabit. Collectively, they influence which and how technologies can be used and their relative effectiveness. Although radio telemetry has historically been the most commonly used technology in freshwater, passive integrated transponder (PIT) technology, acoustic telemetry and biologgers are becoming more popular. Most telemetry studies have focused on fish, although an increasing number have focused on other taxa, such as turtles, crustaceans and molluscs. Key technical developments for freshwater systems include: miniaturization of tags for tracking small-size life stages and species, fixed stations and coded tags for tracking large samples of animals over long distances and large temporal scales, inexpensive PIT systems that enable mass tagging to yield population- and community-level relevant sample sizes, incorporation of sensors into electronic tags, validation of tag attachment procedures with a focus on maintaining animal welfare, incorporation of different techniques (for example, genetics, stable isotopes) and peripheral technologies (for example, geographic information systems, hydroacoustics), development of novel analytical techniques, and extensive international collaboration. Innovations are still needed in tag miniaturization, data analysis and visualization, and in tracking animals over larger spatial scales (for example, pelagic areas of lakes) and in challenging environments (for example, large dynamic floodplain systems, under ice). There seems to be a particular need for adapting various global positioning system and satellite tagging approaches to freshwater. Electronic tagging provides a mechanism to collect detailed information from imperilled animals and species that have no direct economic value. Current and future advances will continue to improve our knowledge of the natural history of aquatic animals and ecological processes in freshwater ecosystems while facilitating evidence-based resource management and conservation.

Animal Biotelemetry↗
USGS2020

Modelling pinniped abundance and distribution by combining counts at terrestrial sites and in-water sightings

Pinnipeds are commonly monitored using aerial photographic surveys at land- or ice-based sites, where animals come ashore for resting, pupping, molting, and to avoid predators. Although these counts form the basis for monitoring population change over time, they do not provide information regarding where animals occur in the water, which is often of management and conservation interest. In this study, we developed a hierarchical model that links counts of pinnipeds at terrestrial sites to sightings-at-sea and estimates abundance, spatial distribution, and the proportion of time spent on land (attendance probability). The structure of the model also allows for the inclusion of predictors that may explain variation in ecological and observation processes. We applied the model to Steller sea lions ( Eumetopias jubatus ) in Glacier Bay, Alaska using counts of sea lions from aerial photographic surveys and opportunistic in-water sightings from vessel surveys. Glacier Bay provided an ideal test and application of the model because data are available on attendance probability based on long-term monitoring. We found that occurrence in the water was positively related to proximity to terrestrial sites, as would be expected for a species that engages in central-place foraging. The proportion of sea lions in attendance at terrestrial sites and overall abundance estimates were consistent with reports from the literature and monitoring programs. The model we describe has benefit and utility for park managers who wish to better understand the overlap between pinnipeds and visitors, and the framework that we present has potential for application across a variety of study systems and taxa.

Alaska↗
USGS2013

Bird-vegetation associations in thinned and unthinned young Douglas-fir forests 10 years after thinning

Quantitative associations between animals and vegetation have long been used as a basis for conservation and management, as well as in formulating predictions about the influence of resource management and climate change on populations. A fundamental assumption embedded in the use of such correlations is that they remain relatively consistent over time. However, this assumption of stationarity has been rarely tested – even for forest birds, which are frequently considered to be 'indicator species' in management operations. We investigated the temporal dynamics of bird-vegetation relationships in young Douglas-fir (Pseudotsuga menziesii) forests over more than a decade following initial anthropogenic disturbance (commercial thinning). We modeled bird occurrence or abundance as a function of vegetation characteristics for eight common bird species for each of six breeding seasons following forest thinning. Generally, vegetation relationships were highly inconsistent in magnitude across years, but remained positive or negative within species. For 3 species, relationships that were initially strong dampened over time. For other species, strength of vegetation association was apparently stochastic. These findings indicate that caution should be used when interpreting weak bird-vegetation relationships found in short-term studies and parameterizing predictive models with data collected over the short term.

Oregon↗
USGS2021

Evidence of economical territory selection in a cooperative carnivore

As an outcome of natural selection, animals are probably adapted to select territories economically by maximizing benefits and minimizing costs of territory ownership. Theory and empirical precedent indicate that a primary benefit of many territories is exclusive access to food resources, and primary costs of defending and using space are associated with competition, travel and mortality risk. A recently developed mechanistic model for economical territory selection provided numerous empirically testable predictions. We tested these predictions using location data from grey wolves ( Canis lupus ) in Montana, USA. As predicted, territories were smaller in areas with greater densities of prey, competitors and low-use roads, and for groups of greater size. Territory size increased before decreasing curvilinearly with greater terrain ruggedness and harvest mortalities. Our study provides evidence for the economical selection of territories as a causal mechanism underlying ecological patterns observed in a cooperative carnivore. Results demonstrate how a wide range of environmental and social conditions will influence economical behaviour and resulting space use. We expect similar responses would be observed in numerous territorial species. A mechanistic approach enables understanding how and why animals select particular territories. This knowledge can be used to enhance conservation efforts and more successfully predict effects of conservation actions.

Montana↗
USGS2024

Variability in coastal habitat available for Longfin Smelt Spirinchus thaleichthys in the northeastern Pacific Ocean

An understanding of oceanographic conditions and processes important to marine animal ecology is fundamental to the development of effective management and conservation actions. Longfin Smelt ( Spirinchus thaleichthys ) is a pelagic forage fish found in coastal and estuarine waters along the Pacific coast of North America from Alaska to central California. Substantial population declines in California’s San Francisco Estuary, where Longfin Smelt are protected under California’s Endangered Species Act, have prompted extensive study of estuarine factors associated with the decline. However, coastal factors that affect up to two-thirds of the Longfin Smelt life cycle are poorly understood and may be important drivers of population dynamics. We compiled coastal observations from numerous sources to estimate the range-wide coastal marine distribution of Longfin Smelt and assess habitat factors affecting distribution in the northeast Pacific Ocean. Based on maximum entropy species distribution models, Longfin Smelt distribution was correlated with depth, distance from the nearest estuary, sea surface temperature, and sea surface chlorophyll. Longfin Smelt were found in shallow, higher productivity coastal waters closer to estuaries, with depth and temperature the most consistent factors influencing distribution. Habitat suitability was highly variable at the southern extent of the range, particularly off the California coast, and was largely driven by habitat contractions associated with warm-water conditions. Study results provide insights into the habitat and range-wide distribution of an at-risk estuarine-reliant forage fish and are the first step toward identifying processes that affect the marine portion of the Longfin Smelt life cycle.

Frontiers in Marine Science↗
USGS2022

Management of diseases in free-ranging wildlife populations

Diseases are increasingly threatening the conservation of wildlife species. Spillover of pathogens into humans and domestic animals may negatively impact public health and the economy, requiring increased proactive management actions. The North American Wildlife Management Model provides the philosophical basis for managing wildlife and underpins all management options. Diseases in wildlife populations may be managed by manipulation of the environment, manipulation of the host, manipulation of the agent, and modification of human behavior. Important considerations include setting management goals, and metrics to assess success. Future strategies include using systems and One Health approaches to develop interventions that optimize outcomes for humans, animals, and the environment.

Book chapter↗
USGS2025

Not all who meander are lost: Migrating sea lamprey follow river thalwegs to facilitate safe and efficient passage upstream

Efficient navigation is crucial for the reproductive success of many migratory species, often driven by competing pressures to conserve energy and reduce predation risk. Little is known about how non-homing species achieve this balance. We show that sea lamprey ( Petromyzon marinus ), an ancient extant vertebrate, uses persistent patterns in hydro-geomorphology to quickly and efficiently navigate through complex ecosystems. Hydrodynamic flow models coupled with bathymetric mapping and fine-scale acoustic telemetry revealed movement paths that tracked thalweg scour channels, which are often the deepest and fastest-flowing sections of a river. These paths allow rapid and efficient upstream migration and suggest the existence of a bathymetric highway system. Near-substrate swimming along this path resulted in a median of 5.8% energy savings while also promoting improved safety from nocturnally active predators. We hypothesize sea lampreys use hydrostatic pressure-guided rheotaxis to achieve this navigation. It is likely this tactic relies on sensory information from the animal's primitive lateral line and perhaps the inner ear. Insights from this study can be used to redesign conservation practices to achieve improved control where the animal is invasive and improved fish passage within its native range.

Michigan↗
USGS2015

A hidden view of wildlife conservation: How camera traps aid science, research and management

Florida panthers are among the world’s most endangered — and elusive — animals. For approximately four decades, scientists have been researching this small population of panthers that inhabit the dense forests and swamps of south Florida. Because of their wide habitat range along with an absence of clear visual features, these animals are difficult to detect and identify. In 2013, however, researchers released a study that used camera trap images collected between 2005 and 2007 to generate the first statistically reliable density estimates for the remaining population of this subspecies. Camera traps — remotely activated cameras with infrared sensors — first gained measurable popularity in wildlife conservation in the early 1990s. Today, they’re used for a variety of activities, from species-specific research to broad-scale inventory or monitoring programs that, in some cases, attempt to detect biodiversity across vast landscapes. As this modern tool continues to evolve, it’s worth examining its uses and benefits for wildlife management and conservation.

The Wildlife Professional↗