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Estimating spatial and temporal components of variation in count data using negative binomial mixed models

P artitioning total variability into its component temporal and spatial sources is a powerful way to better understand time series and elucidate trends. The data available for such analyses of fish and other populations are usually nonnegative integer counts of the number of organisms, often dominated by many low values with few observations of relatively high abundance. These characteristics are not well approximated by the Gaussian distribution. We present a detailed description of a negative binomial mixed-model framework that can be used to model count data and quantify temporal and spatial variability. We applied these models to data from four fishery-independent surveys of Walleyes Sander vitreus across the Great Lakes basin. Specifically, we fitted models to gill-net catches from Wisconsin waters of Lake Superior; Oneida Lake, New York; Saginaw Bay in Lake Huron, Michigan; and Ohio waters of Lake Erie. These long-term monitoring surveys varied in overall sampling intensity, the total catch of Walleyes, and the proportion of zero catches. Parameter estimation included the negative binomial scaling parameter, and we quantified the random effects as the variations among gill-net sampling sites, the variations among sampled years, and site × year interactions. This framework (i.e., the application of a mixed model appropriate for count data in a variance-partitioning context) represents a flexible approach that has implications for monitoring programs (e.g., trend detection) and for examining the potential of individual variance components to serve as response metrics to large-scale anthropogenic perturbations or ecological changes.

Iowa, Maine, Michigan, Ohio, Wisconsin

The effects of juvenile American shad planktivory on zooplankton production in Columbia River food webs

Columbia River reservoirs support a large population of nonnative American Shad Alosa sapidissima that consume the zooplankton that native fishes also rely on. We hypothesized that the unprecedented biomass of juvenile American Shad in John Day Reservoir is capable of altering the zooplankton community if these fish consume a large portion of the zooplankton production. We derived taxon-specific estimates of zooplankton production using field data and a production model from the literature. Empirical daily ration was estimated for American Shad and expanded to population-level consumption using abundance and biomass data from hydroacoustic surveys. Daphnia spp. production was high in early summer but declined to near zero by September as shad abundance increased. American Shad sequentially consumed Daphnia spp., copepods, and Bosmina spp., which tracked the production trends of these taxa. American Shad evacuation rates ranged from 0.09 to 0.24/h, and daily rations ranged from 0.008 to 0.045 g&middot;g &minus;1 &middot;d &minus;1 (dry weight) over all years. We observed peak American Shad biomass (45.2 kg/ha) in 1994, and daily consumption (1.6 kg/ha) approached 30% (5.3 kg/ha) of zooplankton production. On average, American Shad consumed 23.6% of the available zooplankton production (range, <1&ndash;83%). The changes in the zooplankton community are consistent with a top-down effect of planktivory by American Shad associated with their unprecedented biomass and consumption, but the effects are likely constrained by temperature, nutrient flux, and the seasonal production patterns of zooplankton in John Day Reservoir. American Shad add to the planktivory exerted by other species like Neomysis mercedis to reduce the capacity of the reservoir to support other planktivorous fishes. The introduction of American Shad and other nonnative species will continue to alter the food web in John Day Reservoir, potentially affecting native fishes, including Pacific salmon Oncorhynchus spp.

Columbia River

Spatial segregation of spawning habitat limits hybridization between sympatric native Steelhead and Coastal Cutthroat Trout

Native Coastal Cutthroat Trout Oncorhynchus clarkii clarkii and Coastal Steelhead O. mykiss irideus hybridize naturally in watersheds of the Pacific Northwest yet maintain species integrity. Partial reproductive isolation due to differences in spawning habitat may limit hybridization between these species, but this process is poorly understood. We used a riverscape approach to determine the spatial distribution of spawning habitats used by native Coastal Cutthroat Trout and Steelhead as evidenced by the distribution of recently emerged fry. Molecular genetic markers were used to classify individuals as pure species or hybrids, and individuals were assigned to age-classes based on length. Fish and physical habitat data were collected in a spatially continuous framework to assess the relationship between habitat and watershed features and the spatial distribution of parental species and hybrids. Sampling occurred in 35 reaches from tidewaters to headwaters in a small (20 km 2 ) coastal watershed in Washington State. Cutthroat, Steelhead, and hybrid trout accounted for 35%, 42%, and 23% of the fish collected, respectively. Strong segregation of spawning areas between Coastal Cutthroat Trout and Steelhead was evidenced by the distribution of age-0 trout. Cutthroat Trout were located farther upstream and in smaller tributaries than Steelhead were. The best predictor of species occurrence at a site was the drainage area of the watershed that contributed to the site. This area was positively correlated with the occurrence of age-0 Steelhead and negatively with the presence of Cutthroat Trout, whereas hybrids were found in areas occupied by both parental species. A similar pattern was observed in older juveniles of both species but overlap was greater, suggesting substantial dispersal of trout after emergence. Our results offer support for spatial reproductive segregation as a factor limiting hybridization between Steelhead and Coastal Cutthroat Trout.

Washington

Modeling prey consumption by native and non-native piscivorous fishes: implications for competition and impacts on shared prey in an ultraoligotrophic lake in Patagonia

We examined trophic interactions of the nonnative salmonids Rainbow Trout Oncorhynchus mykiss, Brown Trout Salmo trutta, and Brook Trout Salvelinus fontinalisand the main native predator Creole Perch Percichthys trucha in Lake Nahuel Huapi (Patagonia, Argentina) to determine the relative impact of each predator on their forage base and to evaluate the potential vulnerability of each predator to competitive impacts by the others. Using bioenergetics simulations, we demonstrated the overall importance of galaxiids and decapods to the energy budgets of nonnative salmonids and Creole Perch. Introduced salmonids, especially Rainbow Trout, exerted considerably heavier predatory demands on shared resources than did the native Creole Perch on both a per capita basis and in terms of relative population impacts. Rainbow Trout consumed higher quantities and a wider size range of Small Puyen (also known as Inanga) Galaxias maculatus than the other predators, including early pelagic life stages of that prey; as such, this represents an additional source of mortality for the vulnerable early life stages of Small Puyen before and during their transition from pelagic to benthic habitats. All predators were generally feeding at high feeding rates (above 40% of their maximum physiological rates), suggesting that competition for prey does not currently limit either Creole Perch or the salmonids in this lake. This study highlights the importance of keystone prey for the coexistence of native species with nonnative top predators. It provides new quantitative and qualitative evidence of the high predation pressure exerted on Small Puyen, the keystone prey species, during the larval to juvenile transition from pelagic to littoral-benthic habitat in Patagonian lakes. This study also emphasizes the importance of monitoring salmonid and Creole Perch population dynamics in order to detect signs of potential impacts through competition and shows the need to carefully consider the rationale behind any additional trout stocking.

Transactions of the American Fisheries Society

Landscape-scale evaluation of asymmetric interactions between Brown Trout and Brook Trout using two-species occupancy models

Predicting the distribution of native stream fishes is fundamental to the management and conservation of many species. Modeling species distributions often consists of quantifying relationships between species occurrence and abundance data at known locations with environmental data at those locations. However, it is well documented that native stream fish distributions can be altered as a result of asymmetric interactions between dominant exotic and subordinate native species. For example, the naturalized exotic Brown Trout Salmo trutta has been identified as a threat to native Brook Trout Salvelinus fontinalis in the eastern United States. To evaluate large-scale patterns of co-occurrence and to quantify the potential effects of Brown Trout presence on Brook Trout occupancy, we used data from 624 stream sites to fit two-species occupancy models. These models assumed that asymmetric interactions occurred between the two species. In addition, we examined natural and anthropogenic landscape characteristics we hypothesized would be important predictors of occurrence of both species. Estimated occupancy for Brook Trout, from a co-occurrence model with no landscape covariates, at sites with Brown Trout present was substantially lower than sites where Brown Trout were absent. We also observed opposing patterns for Brook and Brown Trout occurrence in relation to percentage forest, impervious surface, and agriculture within the network catchment. Our results are consistent with other studies and suggest that alterations to the landscape, and specifically the transition from a forested catchment to one that contains impervious surface or agriculture, reduces the occurrence probability of wild Brook Trout. Our results, however, also suggest that the presence of Brown Trout results in lower occurrence probability of Brook Trout over a range of anthropogenic landscape characteristics, compared with streams where Brown Trout were absent.

Pennsylvania

Chinook salmon foraging patterns in a changing Lake Michigan

Since Pacific salmon stocking began in Lake Michigan, managers have attempted to maintain salmon abundance at high levels within what can be sustained by available prey fishes, primarily Alewife Alosa pseudoharengus . Chinook Salmon Oncorhynchus tshawytscha are the primary apex predators in pelagic Lake Michigan and patterns in their prey selection (by species and size) may strongly influence pelagic prey fish communities in any given year. In 1994–1996, there were larger Alewives, relatively more abundant alternative prey species, fewer Chinook Salmon, and fewer invasive species in Lake Michigan than in 2009–2010. The years 2009–2010 were instead characterized by smaller, leaner Alewives, fewer alternative prey species, higher abundance of Chinook Salmon, a firmly established nonnative benthic community, and reduced abundance of Diporeia , an important food of Lake Michigan prey fish. We characterized Chinook Salmon diets, prey species selectivity, and prey size selectivity between 1994–1996 and 2009–2010 time periods. In 1994–1996, Alewife as prey represented a smaller percentage of Chinook Salmon diets than in 2009–2010, when alewife comprised over 90% of Chinook Salmon diets, possibly due to declines in alternative prey fish populations. The size of Alewives eaten by Chinook Salmon also decreased between these two time periods. For the largest Chinook Salmon in 2009–2010, the average size of Alewife prey was nearly 50 mm total length shorter than in 1994–1996. We suggest that changes in the Lake Michigan food web, such as the decline in Diporeia , may have contributed to the relatively low abundance of large Alewives during the late 2000s by heightening the effect of predation from top predators like Chinook Salmon, which have retained a preference for Alewife and now forage with greater frequency on smaller Alewives.

Transactions of the American Fisheries Society

Survival of Apache Trout eggs and alevins under static and fluctuating temperature regimes

Increased stream temperatures due to global climate change, livestock grazing, removal of riparian cover, reduction of stream flow, and urbanization will have important implications for fishes worldwide. Information exists that describes the effects of elevated water temperatures on fish eggs, but less information is available on the effects of fluctuating water temperatures on egg survival, especially those of threatened and endangered species. We tested the posthatch survival of eyed eggs and alevins of Apache Trout Oncorhynchus gilae apache, a threatened salmonid, in static temperatures of 15, 18, 21, 24, and 27&deg;C, and also in treatments with diel fluctuations of &plusmn;3&deg;C around those temperatures. The LT50 for posthatch survival of Apache Trout eyed eggs and alevins was 17.1&deg;C for static temperatures treatments and 17.9&deg;C for the midpoints of &plusmn;3&deg;C fluctuating temperature treatments. There was no significant difference in survival between static temperatures and fluctuating temperatures that shared the same mean temperature, yet there was a slight difference in LT50s. Upper thermal tolerance of Apache Trout eyed eggs and alevins is much lower than that of fry to adult life stages (22&ndash;23&deg;C). Information on thermal tolerance of early life stages (eyed egg and alevin) will be valuable to those restoring streams or investigating thermal tolerances of imperiled fishes.

Transactions of the American Fisheries Society

Lake whitefish diet, condition, and energy density in Lake Champlain and the lower four Great Lakes following dreissenid invasions

Lake Whitefish Coregonus clupeaformis support some of the most valuable commercial freshwater fisheries in North America. Recent growth and condition decreases in Lake Whitefish populations in the Great Lakes have been attributed to the invasion of the dreissenid mussels, zebra mussels Dreissena polymorpha and quagga mussels D. bugensis, and the subsequent collapse of the amphipod, Diporeia, a once-abundant high energy prey source. Since 1993, Lake Champlain has also experienced the invasion and proliferation of zebra mussels, but in contrast to the Great Lakes, Diporeia were not historically abundant. We compared the diet, condition, and energy density of Lake Whitefish from Lake Champlain after the dreissenid mussel invasion to values for those of Lake Whitefish from Lakes Michigan, Huron, Erie, and Ontario. Lake Whitefish were collected using gill nets and bottom trawls, and their diets were quantified seasonally. Condition was estimated using Fulton's condition factor (K) and by determining energy density. In contrast to Lake Whitefish from some of the Great Lakes, those from Lake Champlain Lake Whitefish did not show a dietary shift towards dreissenid mussels, but instead fed primarily on fish eggs in spring, Mysis diluviana in summer, and gastropods and sphaeriids in fall and winter. Along with these dietary differences, the condition and energy density of Lake Whitefish from Lake Champlain were high compared with those of Lake Whitefish from Lakes Michigan, Huron, and Ontario after the dreissenid invasion, and were similar to Lake Whitefish from Lake Erie; fish from Lakes Michigan, Huron, and Ontario consumed dreissenids, whereas fish from Lake Erie did not. Our comparisons of Lake Whitefish populations in Lake Champlain to those in the Great Lakes indicate that diet and condition of Lake Champlain Lake Whitefish were not negatively affected by the dreissenid mussel invasion.

Great Lakes;Lake Champlain

Impacts of golden alga Prymnesium parvum on fish populations in reservoirs of the upper Colorado River and Brazos River basins, Texas

Several reservoirs in the upper Colorado River and Brazos River basins in Texas have experienced toxic blooms of golden alga Prymnesium parvum and associated fish kills since 2001. There is a paucity of information, however, regarding the population-level effects of such kills in large reservoirs, species-specific resistance to or recovery from kills, or potential differences in the patterns of impacts among basins. We used multiple before-after, control-impact analysis to determine whether repeated golden alga blooms have led to declines in the relative abundance and size structure of fish populations. Sustained declines were noted for 9 of 12 fish species surveyed in the upper Colorado River, whereas only one of eight species was impacted by golden alga in the Brazos River. In the upper Colorado River, White Bass Morone chrysops, White Crappie Pomoxis annularis, Largemouth Bass Micropterus salmoides, Bluegill Lepomis macrochirus, River Carpsucker Carpiodes carpio, Freshwater Drum Aplodinotus grunniens, Channel Catfish Ictalurus punctatus, Flathead Catfish Pylodictis olivaris, and Blue Catfish I. furcatus exhibited sustained declines in relative abundance, size structure, or both; Gizzard Shad Dorosoma cepedianum, Longnose Gar Lepisosteus osseus, and Common Carp Cyprinus carpio did not exhibit those declines. In the Brazos River, only the relative abundance of Blue Catfish was impacted. Overall, toxic golden alga blooms can negatively impact fish populations over the long-term, but the patterns of impact can vary considerably among river basins and species. In the Brazos River, populations of most fish species appear to be healthy, suggesting a positive angling outlook for this basin. In the upper Colorado River, fish populations have been severely impacted, and angling opportunities have been reduced. Basin-specific management plans aimed at improving water quality and quantity will likely reduce bloom intensity and allow recovery of fish populations to the abundances and size structures present before golden alga. Received August 26, 2011; accepted November 25, 2012

Transactions of the American Fisheries Society

Environmental correlates of upstream migration of yellow-phase American eels in the Potomac River drainage

Assessing the relationships between upstream migration and environmental variables is important to understanding the ecology of yellow-phase American Eels Anguilla rostrata . During an American Eel migration study within the lower Shenandoah River (Potomac River drainage), we counted and measured American Eels at the Millville Dam eel ladder for three periods: 14 May&ndash;23 July 2004, 7&ndash;30 September 2004, and 1 June&ndash;31 July 2005. Using generalized estimating equations, we modeled each time series of daily American Eel counts by fitting time-varying environmental covariates of lunar illumination (LI), river discharge (RD), and water temperature (WT), including 1-d and 2-d lags of each covariate. Information-theoretic approaches were used for model selection and inference. A total of 4,847 American Eels (19&ndash;74 cm total length) used the ladder during the three periods, including 2,622 individuals during a 2-d span following a hurricane-induced peak in river discharge. Additive-effects models of RD + WT, a 2-d lag of LI + RD, and LI + RD were supported for the three periods, respectively. Parameter estimates were positive for river discharge for each time period, negative for lunar illumination for two periods and positive for water temperature during one period. Additive-effects models supported synergistic influences of environmental variables on the upstream migration of yellow-phase American Eels, although river discharge was consistently supported as an influential correlate of upstream migration.

Maryland

Using diets to reveal overlap and egg predation among benthivorous fishes in Lake Michigan

Ecological stability in the Laurentian Great Lakes has been altered by nonindigenous species, such as the Round Goby Neogobius melanostomus and dreissenid mussels, and by declines in native amphipods Diporeia spp. We evaluated whether these changes could influence diet overlap between three benthivorous fishes (Slimy Sculpin Cottus cognatus, Deepwater Sculpin Myoxocephalus thompsonii, and Round Goby) and whether predation on eggs of native species was occurring. We examined diets of fish collected at depths of 69–128 m in Lake Michigan offshore of Frankfort and Muskegon, Michigan, and Two Rivers and Sturgeon Bay, Wisconsin, during January–May 2009 and 2010. Important prey (by dry weight proportion and by percent frequency of occurrence) for Slimy Sculpin were Mysis (0.34; 45%), Diporeia (0.16; 34%), and Limnocalanus macrurus (0.22; 68%); important prey for Deepwater Sculpin were Mysis (0.74; 92%) and Diporeia (0.16; 54%). Round Goby consumed mainly bivalves (i.e., dreissenids: 0.68; 95%) and Mysis (0.15; 37%). The two sculpin species consumed the eggs of Bloaters Coregonus hoyi (Slimy Sculpin: 0.04, 11%; Deepwater Sculpin: 0.02, 7%) and the eggs of Deepwater Sculpin (Slimy Sculpin: 0.03, 13%; Deepwater Sculpin: 0.05, 16%) during February–May at all sites. Round Goby also consumed eggs of these species but at lower levels (≤0.01; <1%). Diet overlap was identified between sculpin species at Frankfort and Sturgeon Bay, suggesting possible interspecific competition, but their diets did not overlap at Two Rivers; diet overlap was never observed between Round Goby and either sculpin species. Given that (1) diet overlap varied by site and (2) diet proportions varied spatially more than temporally, benthivores appear to be exhibiting localized responses to recent ecological changes. Overall, these results reveal that egg predation and interspecific competition could be important interactions to consider in future examinations of the population dynamics of these species or in ecosystem models that forecast how fisheries will respond to possible perturbations or management scenarios.

Michigan

Fish assemblages in borrow-pit lakes of the Lower Mississippi River

Borrow-pit lakes encompass about a third of the lentic water habitats (by area) in the active floodplain of the Lower Mississippi River, yet little is known about their fish assemblages. We investigated whether fish assemblages supported by borrow-pit lakes resembled those in oxbow lakes to help place the ecological relevance of borrow-pit lakes in context with that of natural floodplain lakes. In all, we collected 75 fish species, including 65 species in eight borrow-pit lakes, 52 species in four riverside oxbow lakes, and 44 species in eight landside oxbow lakes. Significant differences in several species richness metrics were evident between borrow-pit lakes and landside oxbow lakes but not between borrow-pit lakes and riverside oxbow lakes. All three lake types differed in fish assemblage composition. Borrow-pit lakes and riverside oxbow lakes tended to include a greater representation of fish species that require access to diverse environments, including lentic, lotic, and palustrine habitats; fish assemblages in landside oxbow lakes included a higher representation of lacustrine species. None of the fish species collected in borrow-pit lakes was federally listed as threatened or endangered, but several were listed as species of special concern by state governments in the region, suggesting that borrow-pit lakes provide habitat for sensitive riverine and wetland fish species. Differences in fish assemblages among borrow-pit lakes were linked to engineered morphologic features, suggesting that diversity in engineering can contribute to diversity in fish assemblages; however, more research is needed to match engineering designs with fish assemblage structures that best meet conservation needs.

Lower Mississippi River

Evaluation of four suture materials for surgical incision closure in Siberian sturgeon

The visual and microscopic tissue reactions to the absorbable monofilament Monocryl, absorbable monofilament triclosan-coated Monocryl-Plus, absorbable multifilament Vicryl, and nonabsorbable monofilament Prolene were evaluated for their use of surgical closure in Siberian Sturgeon Acipenser baerii . Postoperative assessments were conducted at 1, 2, 8, 12, and 26 and 55 weeks to visually evaluate the surgical incision for suture retention, incision healing, erythema, and swelling. Incisions were also assessed microscopically at 1, 2, and 8 weeks for necrosis, inflammation, hemorrhage, and fibroplasia. The results indicated that incisions closed with either Vicryl or Prolene suture materials were more likely to exhibit more erythema or incomplete healing compared with those closed with Monocryl or Monocryl-Plus. The surgical implantation of a transmitter in the coelomic cavity did not significantly affect the response variables among the four suture materials. Monocryl or Monocryl-Plus were equally effective and superior to other suture materials used for closing surgical incisions in Siberian Sturgeon or closely related species of sturgeon. Furthermore, Monocryl or Monocryl-Plus may decrease the risk of transmitter expulsion through the incision, as surgical wounds appear to heal faster and exhibit less erythema compared with those closed with Vicryl.

Transactions of the American Fisheries Society

Characterizing the thermal suitability of instream habitat for salmonids: A cautionary example from the Rocky Mountains

Understanding a species&rsquo; thermal niche is becoming increasingly important for management and conservation within the context of global climate change, yet there have been surprisingly few efforts to compare assessments of a species&rsquo; thermal niche across methods. To address this uncertainty, we evaluated the differences in model performance and interpretations of a species&rsquo; thermal niche when using different measures of stream temperature and surrogates for stream temperature. Specifically, we used a logistic regression modeling framework with three different indicators of stream thermal conditions (elevation, air temperature, and stream temperature) referenced to a common set of Brook Trout Salvelinus fontinalis distribution data from the Boise River basin, Idaho. We hypothesized that stream temperature predictions that were contemporaneous with fish distribution data would have stronger predictive performance than composite measures of stream temperature or any surrogates for stream temperature. Across the different indicators of thermal conditions, the highest measure of accuracy was found for the model based on stream temperature predictions that were contemporaneous with fish distribution data (percent correctly classified = 71%). We found considerable differences in inferences across models, with up to 43% disagreement in the amount of stream habitat that was predicted to be suitable. The differences in performance between models support the growing efforts in many areas to develop accurate stream temperature models for investigations of species&rsquo; thermal niches.

Idaho

Effects of simulated angler capture and live-release tournaments on walleye survival

We examined the effects of acclimation water temperature,live‐well (LW) water temperature,and LW dissolved oxygen (DO) concentration on survival of adult Walleyes Sander vitreus subjected to simulated tournament conditions (angling,LW confinement,and weigh‐in procedures) under controlled laboratory conditions. We tested three acclimation temperatures (12,18,and 24°C),and three LW temperature differentials (Δ T = −4,0,and +4°C) were tested at each acclimation temperature. Survival was monitored after 8 h of LW confinement and during a 5‐d retention period in 1,700‐L tanks. None of the Walleyes that were acclimated to 24°C and subjected to simulated tournament procedures survived the 5‐d retention period; for fish subjected only to simulated angling at 24°C,survival during the 5‐d retention period was 29%. Five‐day survival was generally over 70% at acclimation temperatures of 12°C and 18°C,and we observed a significant interaction between acclimation temperature and Δ T ; survival was greatest in LWs at −4°C Δ T for fish acclimated to 18°C and in LWs at +4°C Δ T for fish acclimated to 12°C. Best survival of Walleyes subjected to the stress of angling and tournament procedures was obtained at temperatures 6–8°C below the optimum temperature for adult Walleyes (i.e.,optimum = 20–22°C). Five‐day survival exceeded 70% when LW DO was 5 or 12–15 mg/L (at an acclimation and LW temperature of 18°C),but survival was 0% when DO was 2 mg/L. Anglers may increase survival of Walleyes through careful manipulation of LW temperature and DO when ambient temperature is at or below 18°C,but high mortality of angled and LW‐retained Walleyes should be expected when ambient water temperatures are 24°C or greater.

Minnesota

Comparing effects of transmitters within and among populations: application to swimming performance of juvenile Chinook salmon

The sensitivity of fish to a transmitter depends on factors such as environmental conditions, fish morphology, life stage, rearing history, and tag design. However, synthesizing general trends across studies is difficult because each study focuses on a particular performance measure, species, life stage, and transmitter model. These differences motivated us to develop simple metrics that allow effects of transmitters to be compared among different species, populations, or studies. First, we describe how multiple regression analysis can be used to quantify the effect of tag burden (transmitter mass relative to fish mass) on measures of physiological performance. Next, we illustrate how the slope and intercept parameters can be used to calculate two summary statistics: θ, which estimates the tag burden threshold above which the performance of tagged fish begins to decline relative to untagged fish; and k, which measures the percentage change in performance per percentage point increase in tag burden. When θ = 0, k provides a single measure of the tag's effect that can be compared among species, populations, or studies. We apply this analysis to two different experiments that measure the critical swimming speed (U crit) of tagged juvenile Chinook Salmon Oncorhynchus tshawytscha. In both experiments, U crit declined as tag burden increased, but we found no significant threshold in swimming performance. Estimates of θ ranged from −0.6% to 2.1% among six unique treatment groups, indicating that swimming performance began to decline at a relatively low tag burden. Estimates of k revealed that U crit of tagged fish declined by −2.68% to −4.86% for each 1% increase in tag burden. Both θ and k varied with the tag's antenna configuration, tag implantation method, and posttagging recovery time. Our analytical approach can be used to gain insights across populations to better understand factors affecting the ability of fish to carry a transmitter.

Transactions of the American Fisheries Society

Colonization of steelhead in a natal stream after barrier removal

Colonization of vacant habitats is an important process for supporting the long-term persistence of populations and species. We used a before–after experimental design to follow the process of colonization by steelhead Oncorhynchus mykiss (anadromous Rainbow Trout) at six monitoring sites in a natal stream, Beaver Creek, after the modification or removal of numerous stream passage barriers. Juvenile O. mykiss were collected at monitoring sites by using a backpack electrofisher. Passive integrated transponder tags and instream tag reading stations were used in combination with 16 microsatellite markers to determine the source, extent, and success of migrant O. mykiss after implementation of the barrier removal projects. Steelhead migrated into the study area during the first spawning season after passage was established. Hatchery steelhead, although comprising more than 80% of the adult returns to the Methow River basin, constituted a small proportion (23%) of the adult O. mykiss colonizing the study area. Adult steelhead and fluvial Rainbow Trout entered the stream during the first spawning season after barrier removal and were passing the uppermost tag reader (12 km upstream from the mouth) 3–4 years later. Parr that were tagged in Beaver Creek returned as adults, indicating establishment of the anadromous life history in the study area. Population genetic measures at the lower two monitoring sites (lower 4 km of Beaver Creek) significantly changed within one generation (4–5 years). Colonization and expansion of steelhead occurred more slowly than expected due to the low number of adults migrating into the study area.

Transactions of the American Fisheries Society

Feeding ecology of pelagic larval Burbot in Northern Lake Huron, Michigan

Burbot Lota lota are a key demersal piscivore across the Laurentian Great Lakes whose populations have declined by about 90% in recent decades. Larval Burbot typically hatch in the early spring and rely on abundant crustacean zooplankton prey. We examined the stomach contents of larval Burbot from inshore (&le;15 m) and offshore sites (37 and 91 m) in northern Lake Huron, Michigan. Concurrent zooplankton vertical tows at the same sites showed that the prey community was dominated by calanoid copepods, dreissenid mussel veligers, and rotifers. Burbot consumed mostly cyclopoid copepods, followed by copepod nauplii and calanoid copepods. Chesson's index of selectivity was calculated and compared among sites and months for individual Burbot. According to this index, larval Burbot exhibited positive selection for cyclopoid copepods and copepod nauplii and negative selection for calanoid copepods, cladocerans, rotifers, and dreissenid veligers. This selectivity was consistent across sites and throughout the sampling period. Burbot displayed little variation in their prey preferences during the larval stage, which suggests that the recent shifts in zooplankton abundance due to the invasion of the predatory zooplankter Bythotrephes longimanus and competition from invasive Rainbow Smelt Osmerus mordax could negatively impact larval Burbot populations.

Michigan