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At least 217 records · Page 12Linked to original sources
USGS1981

Zooplankton fecal pellets link fossil fuel and phosphate deposits

Fossil zooplankton fecal pellets found in thinly bedded marine and lacustrine black shales associated with phosphate, oil, and coal deposits, link the deposition of organic matter and biologically associated minerals with planktonic ecosystems. The black shales were probably formed in the anoxic basins of coastal marine waters, inland seas, and rift valley lakes where high productivity was supported by runoff, upwelling, and outwelling.

Science↗
USGS2007

Status review of the Marbled Murrelet (Brachyramphus marmoratus) in Alaska and British Columbia

The Marbled Murrelet ( Brachyramphus marmoratus ) is a small, diving seabird inhabiting inshore waters of the Northeastern Pacific Ocean. This species feeds on small, schooling fishes and zooplankton, and nests primarily on the moss-covered branches of large, old-growth conifers, and also, in some parts of its range, on the ground. We reviewed existing information on this species to evaluate its current status in the northern part of its range—Alaska (U.S.) and British Columbia (Canada). Within the southern part of its range (Washington, Oregon, and California, U.S.), the Marbled Murrelet was listed as a threatened species under the Endangered Species Act (ESA) in 1993, and the U.S. Fish and Wildlife Service (USFWS) needed information on the species throughout its range for ESA deliberations. We compiled published information on the conservation status, population biology, foraging ecology, population genetics, population status and trends, demography, marine and nesting habitat characteristics, threats, and ongoing conservation efforts for Marbled Murrelets in Alaska and British Columbia. We conducted a new genetic study using samples from a segment of the range that had not been included in previous studies (Washington, Oregon) and additional nuclear intron and microsatellite markers. We also analyzed available at-sea survey data from several locations for trend. To understand the reasonableness of the empirical trend data, we developed demographic models incorporating stochasticity to discern what population trends were possible by chance. The genetic studies substantially confirmed previous findings on population structure in the Marbled Murrelet. Our present work finds three populations: (1) one comprising birds in the central and western Aleutian Islands; (2) one comprising birds in central California; and (3) one comprising birds within the center of the range from the eastern Aleutians to northern California. Our knowledge of genetic structure within this central population is limited and it requires additional study. Compiling available abundance information, we estimated that in the recent past, Marbled Murrelets in Alaska numbered on the order of 1 million birds. We were unable to generate a similar estimate for historical population size in British Columbia. Using trend information from at-sea surveys spanning a wide geographic range in Alaska, murrelet numbers declined significantly at five of eight trend sites at annual rates of -5.4 to -12.7 percent since the early 1990s. Applying these rates of decline to the historical population estimate, the current murrelet population in Alaska is projected to be on the order of 270,000 birds. This represents an overall population decline of about 70 percent during the past 25 years. In British Columbia, available trend data indicate that murrelet populations there have experienced similar declines. We updated a recent (2002) population estimate for British Columbia, concluding that there are now between 54,000 and 92,000 murrelets in British Columbia. The rates of decline we observed are within, but at the high end of, a range of rates expected by chance. Given that declines were estimated for sites over essentially the entire northern range of the species, there is cause for concern about the species’ status. In their marine habitats, Marbled Murrelets overlap with salmon (Oncorhynchus sp.) gillnetting operations in British Columbia and in Alaska (especially in Prince William Sound and Southeast Alaska), and annual bycatch mortality is likely in the low thousands per year, although bycatch rates are difficult to measure. The species’ inshore distribution coincides with high levels of vessel traffic and makes them especially vulnerable to both chronic oil pollution and to catastrophic spills (e.g., the 1989 Exxon Valdez oil spill [EVOS] in south-central Alaska, which is estimated to have killed 12,000 to 15,000 murrelets). In their forested nesting habitats, Marbled Murrelets have lost about 15 percent of their suitable nesting habitat in Southeast Alaska, and 33 to 49 percent in British Columbia, from industrial-scale logging within the past half century. Increased predation also may be a threat to murrelet populations, related to fragmentation and edge effects from logging and development, and recent population increases observed for some important murrelet predators, including Bald Eagles ( Haliaeetus leucocephalus ), Common Ravens ( Corvus corax ), and Steller’s Jays ( Cyanocitta stelleri ). Nesting habitat losses cannot explain the declines observed in areas where industrial logging has not occurred on a large scale (e.g., Prince William Sound) or at all (Glacier Bay). The apparent change in population size and rates of decline reported for the Marbled Murrelet are large, and we therefore considered alternative explanations and precedents for changes of similar magnitude in other marine wildlife populations in the Northeastern Pacific Ocean. The declines are likely real, and related to combined and cumulative effects from climate-related changes in the marine ecosystem (most likely the 1977 regime shift) and human activities (logging, gillnet bycatch, oil pollution). Much uncertainty about the decline could be alleviated by continuing to repeat boat surveys in Prince William Sound and lower Cook Inlet, and by repeating the boat survey of Southeast Alaska that was conducted in 1994. This survey used a statistically sound design and covered the region that has been and likely remains the center of the species’ abundance. Important questions remain to be addressed about methods for measuring population status and change, adult mortality (major sources, density dependence, seasonal concordance), and the movements of wintering populations.

Alaska, British Columbia↗
USGS1994

Humic and fulvic acids: sink or source in the availability of metals to the marine bivalves Macoma balthica and Potamocorbula amurensis ?

Humic acids (HA) and fulvic acids (FA) are common forms of organic matter in marine sediments, and are routinely ingested by deposit- and suspension-feeding animals. These compounds may be a sink for metals, implying that once metals are bound to humic substances they are no longer available to food webs. A series of experiments was conducted to quantitatively examine this premise using 2 estuarine bivalves from San Francisco Bay, USA: the suspension feeder Potarnocorbula arnurensis and the facultative deposit feeder Macoma balthica . HA and FA, isolated from marine sediments, were bound as organic coatings to either hydrous ferric oxides (HFO) or silica particles. Cd and Cr(II1) were adsorbed to the organic coatings or directly to uncoated HFO and silica particles. Pulse-chase laboratory feeding expenments using 109 Cd and 51 Cr(III) were then conducted to determine absorption efficiencies of Cd and Cr for individual specimens using each of the particle types. The results demonstrated that: (1) absorption of Cr(I1I) from all types of non-living particles was consistently low (< 11%). Ingested Cd showed greater bioavailability than Cr(IIl), perhaps due to differences in metal chemistry. (2) Bivalves absorbed Cd bound to uncoated HFO or silica particles (i.e. with no HA or FA present). (3) The presence of organic coatings on particles reduced Cd bioavailabhty compared with uncoated particles. (4) Both geochemical and biological conditions affected the food chain transfer of Cd. The data suggest that in marine systems inorganic and organic-coated particles are predominantly a sink for Cr in sediments. In the transfer of Cd to consumer animals, inorganic particles and humic substances can act as a link (although not a highly efficient one) under oxidized conditions.

Marine Ecology Progress Series↗
USGS2025

Infection by the marine cestode Hepatoxylon trichiuri in returning Chinook salmon (Oncorhynchus tshawytscha) spawners in Patagonia: Implications for a novel fishery

Parasitological information may be useful for managing economically important fisheries by providing insights into population dynamics and health effects. The Chinook salmon ( Oncorhynchus tshawytscha ), an invasive species with high socio-ecological importance in South America, supports recreational and incipient artisanal fisheries. In Southern Chile, the recent approval of coastal fisheries for returning Chinook salmon in some regions highlights the importance of understanding salmon foraging, habitat use, and commercial value. However, such information is lacking. Parasites have been extensively used as cost-effective biological tags to identify fish stocks. We conducted the first parasitological examination of the marine tapeworm Hepatoxylon trichiuri larvae in returning adult Chinook salmon from the Cisnes River to assess its potential as a biological tag for returning Chinook salmon in Patagonia. Of 61 Chinook salmon from the Cisnes River, 52.46% were infected by H. trichiuri , with 1.65 ± 1.26 parasites per infected salmon (mean ± SD). Infection prevalence and intensity did not differ significantly between males and females. Infection intensity was higher in larger salmon but decreased with increasing salmon condition. Infection intensity was not significantly related to length, mass, or body condition. Infection prevalence and intensity of H. trichiuri varied spatially among Patagonian river-basin populations of Chinook salmon, thereby supporting the use of H. trichiuri as a biological tag. Our findings provide important parasitological metrics that may enhance future management practices by informing geographic variability in foraging locations of adult salmon and their commercial value for human consumption.

Cisnes River, Patagonia↗
USGS2010

Global research priorities for sea turtles: Informing management and conservation in the 21st century

Over the past 3 decades, the status of sea turtles and the need for their protection to aid population recovery have increasingly captured the interest of government agencies, non-governmental organisations (NGOs) and the general public worldwide. This interest has been matched by increased research attention, focusing on a wide variety of topics relating to sea turtle biology and ecology, together with the interrelations of sea turtles with the physical and natural environments. Although sea turtles have been better studied than most other marine fauna, management actions and their evaluation are often hindered by the lack of data on turtle biology, human–turtle interactions, turtle population status and threats. In an effort to inform effective sea turtle conservation a list of priority research questions was assembled based on the opinions of 35 sea turtle researchers from 13 nations working in fields related to turtle biology and/or conservation. The combined experience of the contributing researchers spanned the globe as well as many relevant disciplines involved in conservation research. An initial list of more than 200 questions gathered from respondents was condensed into 20 metaquestions and classified under 5 categories: reproductive biology, biogeography, population ecology, threats and conservation strategies.

Endangered Species Research↗
USGS2018

High-precision 41K/39K measurements by MC-ICP-MS indicate terrestrial variability of δ41K

Potassium is a major component in continental crust, the fourth-most abundant cation in seawater, and a key element in biological processes. Until recently, difficulties with existing analytical techniques hindered our ability to identify natural isotopic variability of potassium isotopes in terrestrial materials. However, measurement precision has greatly improved and a range of K isotopic compositions has now been demonstrated in natural samples. In this study, we present a new technique for high-precision measurement of K isotopic ratios using high-resolution, cold plasma multi-collector mass spectrometry. We apply this technique to demonstrate natural variability in the ratio of 41 K to 39 K in a diverse group of geological and biological samples, including silicate and evaporite minerals, seawater, and plant and animal tissues. The total range in 41 K/ 39 K ratios is ca. 2.6‰, with a long-term external reproducibility of 0.17‰ (2, N=108). Seawater and seawater-derived evaporite minerals are systematically enriched in 41 K compared to silicate minerals by ca. 0.6‰, a result consistent with recent findings1, 2. Although our average bulk-silicate Earth value (-0.54‰) is indistinguishable from previously published values, we find systematic δ 41 K variability in some high-temperature sample suites, particularly those with evidence for the presence of fluids. The δ 41 K values of biological samples span a range of ca. 1.2‰ between terrestrial mammals, plants, and marine organisms. Implications of terrestrial K isotope variability for the atomic weight of K and K-based geochronology are discussed. Our results indicate that high-precision measurements of stable K isotopes, made using commercially available mass spectrometers, can provide unique insights into the chemistry of potassium in geological and biological systems.

Journal of Analytical Atomic Spectrometry↗
USGS2006

Freshwater and saline loads of dissolved inorganic nitrogen to Hood Canal and Lynch Cove, western Washington

Hood Canal is a long (110 kilometers), deep (175 meters) and narrow (2 to 4 kilometers wide) fjord of Puget Sound in western Washington. The stratification of a less dense, fresh upper layer of the water column causes the cold, saltier lower layer of the water column to be isolated from the atmosphere in the late summer and autumn, which limits reaeration of the lower layer. In the upper layer of Hood Canal, the production of organic matter that settles and consumes dissolved oxygen in the lower layer appears to be limited by the load of dissolved inorganic nitrogen (DIN): nitrate, nitrite, and ammonia. Freshwater and saline loads of DIN to Hood Canal were estimated from available historical data. The freshwater load of DIN to the upper layer of Hood Canal, which could be taken up by phytoplankton, came mostly from surface and ground water from subbasins, which accounts for 92 percent of total load of DIN to the upper layer of Hood Canal. Although DIN in rain falling on land surfaces amounts to about one-half of the DIN entering Hood Canal from subbasins, rain falling directly on the surface of marine waters contributed only 4 percent of the load to the upper layer. Point-source discharges and subsurface flow from shallow shoreline septic systems contributed less than 4 percent of the DIN load to the upper layer. DIN in saline water flowing over the sill into Hood Canal from Admiralty Inlet was at least 17 times the total load to the upper layer of Hood Canal. In September and October 2004, field data were collected to estimate DIN loads to Lynch Cove - the most inland marine waters of Hood Canal that routinely contain low dissolved-oxygen waters. Based on measured streamflow and DIN concentrations, surface discharge was estimated to have contributed about one-fourth of DIN loads to the upper layer of Lynch Cove. Ground-water flow from subbasins was estimated to have contributed about one-half of total DIN loads to the upper layer. In autumn 2004, the relative contribution of DIN from shallow shoreline septic systems to the upper layer was higher in Lynch Cove (23 percent) than in the entire Hood Canal. Net transport of DIN into Lynch Cove by marine currents was measured during August and October 2004-a time of high biological productivity. The net transport of lower-layer water into Lynch Cove was significantly diminished relative to the flow entering Hood Canal at its entrance. Even though the net transport of saline water into the lower layer of Lynch Cove was only 119 cubic meters per second, estuarine currents between 33 and 47 m were estimated to have carried more than 35 times the total freshwater load of DIN to the upper layer from surface and ground water, shallow shoreline septic systems, and direct atmospheric rainfall. The subsurface maximums in measured turbidity, chlorophyll a, particulate organic carbon, and particulate organic nitrogen strongly suggest that the upward mixing of nitrate-rich deeper water is a limiting factor in supplying DIN to the upper layer that enhances marine productivity in Lynch Cove. The presence of phosphate in the upper layer in the absence of dissolved inorganic nitrogen also suggests that the biological productivity that leads to low dissolved-oxygen concentrations in the lower layer of Lynch Cove is limited by the supply of nitrogen rather than by phosphate loads. Although the near-shore zones of the shallow parts of Lynch Cove were sampled, a biogeochemical signal from terrestrial nitrogen was not found. Reversals in the normal estuarine circulation suggest that if the relative importance of the DIN load of freshwater terrestrial and atmospheric sources and the DIN load from transport of saline water by the estuarine circulation in controlling dissolved-oxygen concentrations in Lynch Cove is to be better understood, then the physical forces driving Hood Canal circulation must be better defined.

Scientific Investigations Report↗
USGS2021

Isolating detrital and diagenetic signals in magnetic susceptibility records from methane-bearing marine sediments

Volume-dependent magnetic susceptibility (κ) is commonly used for paleoenvironmental reconstructions in both terrestrial and marine sedimentary environments where it reflects a mixed signal between primary deposition and secondary diagenesis. In the marine environment, κ is strongly influenced by the abundance of ferrimagnetic minerals regulated by sediment transport processes. Post-depositional alteration by H 2 S, however, can dissolve titanomagnetite, releasing reactive Fe that promotes pyritization and subsequently decreases κ. Here, we provide a new approach for isolating the detrital signal in κ and identifying intervals of diagenetic alteration of κ driven by organoclastic sulfate reduction (OSR) and the anaerobic oxidation of methane (AOM) in methane-bearing marine sediments offshore India. Using the correlation of a heavy mineral proxy from X-ray fluorescence data (Zr/Rb) and κ in unaltered sediments, we predict the primary detrital κ signal and identify intervals of decreased κ, which correspond to increased total sulfur content. Our approach is a rapid, high-resolution method that can identify overprinted κ resulting from pyritization of titanomagnetite due to H 2 S production in marine sediments. In addition, total organic carbon, total sulfur, and authigenic carbonate δ 13 C measurements indicate that both OSR and AOM can drive the observed κ loss, but AOM drives the greatest decreases in κ. Overall, our approach can enhance paleoenvironmental reconstructions and provide insight into paleo-positions of the sulfate-methane transition zone, past enhancements of OSR or paleo-methane seepage, and the role of detrital iron oxide minerals on the marine sediment sulfur sink, with consequences influencing the development of chemosynthetic biological communities at methane seeps.

Geochemistry, Geophysics, Geosystems↗
USGS2013

Distribution of late Pleistocene ice-rich syngenetic permafrost of the Yedoma Suite in east and central Siberia, Russia

This digital database is the product of collaboration between the U.S. Geological Survey, the Geophysical Institute at the University of Alaska, Fairbanks; the Los Altos Hills Foothill College GeoSpatial Technology Certificate Program; the Alfred Wegener Institute for Polar and Marine Research, Potsdam, Germany; and the Institute of Physical Chemical and Biological Problems in Soil Science of the Russian Academy of Sciences. The primary goal for creating this digital database is to enhance current estimates of soil organic carbon stored in deep permafrost, in particular the late Pleistocene syngenetic ice-rich permafrost deposits of the Yedoma Suite. Previous studies estimated that Yedoma deposits cover about 1 million square kilometers of a large region in central and eastern Siberia, but these estimates generally are based on maps with scales smaller than 1:10,000,000. Taking into account this large area, it was estimated that Yedoma may store as much as 500 petagrams of soil organic carbon, a large part of which is vulnerable to thaw and mobilization from thermokarst and erosion. To refine assessments of the spatial distribution of Yedoma deposits, we digitized 11 Russian Quaternary geologic maps. Our study focused on extracting geologic units interpreted by us as late Pleistocene ice-rich syngenetic Yedoma deposits based on lithology, ground ice conditions, stratigraphy, and geomorphological and spatial association. These Yedoma units then were merged into a single data layer across map tiles. The spatial database provides a useful update of the spatial distribution of this deposit for an approximately 2.32 million square kilometers land area in Siberia that will (1) serve as a core database for future refinements of Yedoma distribution in additional regions, and (2) provide a starting point to revise the size of deep but thaw-vulnerable permafrost carbon pools in the Arctic based on surface geology and the distribution of cryolithofacies types at high spatial resolution. However, we recognize that the extent of Yedoma deposits presented in this database is not complete for a global assessment, because Yedoma deposits also occur in the Taymyr lowlands and Chukotka, and in parts of Alaska and northwestern Canada.

Siberia↗
USGS2019

Skin and fin diseases

Fish are critically important to the welfare of this planet and its occupants, the health of both wild and captive fish populations paramount to our survival. This book presents the gross pathology of the most commonly encountered diseases and syndromes of fish in an organ system-based approach. It provides an overview of the diseases and disorders of tropical, ornamental, bait and food fish from freshwater, brackish and marine environments. Readers will gain a broader understanding of the basic biology of infectious and non-infectious diseases in fish, as well as novel diagnostic techniques and innovative disease control methods.

Book chapter↗
USGS2016

DNA and dispersal models highlight constrained connectivity in a migratory marine megavertebrate

Population structure and spatial distribution are fundamentally important fields within ecology, evolution, and conservation biology. To investigate pan-Atlantic connectivity of globally endangered green turtles ( Chelonia mydas ) from two National Parks in Florida, USA, we applied a multidisciplinary approach comparing genetic analysis and ocean circulation modeling. The Everglades (EP) is a juvenile feeding ground, whereas the Dry Tortugas (DT) is used for courtship, breeding, and feeding by adults and juveniles. We sequenced two mitochondrial segments from 138 turtles sampled there from 2006-2015, and simulated oceanic transport to estimate their origins. Genetic and ocean connectivity data revealed northwestern Atlantic rookeries as the major natal sources, while southern and eastern Atlantic contributions were negligible. However, specific rookery estimates differed between genetic and ocean transport models. The combined analyses suggest that post-hatchling drift via ocean currents poorly explains the distribution of neritic juveniles and adults, but juvenile natal homing and population history likely play important roles. DT and EP were genetically similar to feeding grounds along the southern US coast, but highly differentiated from most other Atlantic groups. Despite expanded mitogenomic analysis and correspondingly increased ability to detect genetic variation, no significant differentiation between DT and EP, or among years, sexes or stages was observed. This first genetic analysis of a North Atlantic green turtle courtship area provides rare data supporting local movements and male philopatry. The study highlights the applications of multidisciplinary approaches for ecological research and conservation.

Florida↗
USGS2002

Parasites and marine invasions

Introduced marine species are a major environmental and economic problem. The rate of these biological invasions has substantially increased in recent years due to the globalization of the world's economies. The damage caused by invasive species is often a result of the higher densities and larger sizes they attain compared to where they are native. A prominent hypothesis explaining the success of introduced species is that they are relatively free of the effects of natural enemies. Most notably, they may encounter fewer parasites in their introduced range compared to their native range. Parasites are ubiquitous and pervasive in marine systems, yet their role in marine invasions is relatively unexplored. Although data on parasites of marine organisms exist, the extent to which parasites can mediate marine invasions, or the extent to which invasive parasites and pathogens are responsible for infecting or potentially decimating native marine species have not been examined. In this review, we present a theoretical framework to model invasion success and examine the evidence for a relationship between parasite presence and the success of introduced marine species. For this, we compare the prevalence and species richness of parasites in several introduced populations of marine species with populations where they are native. We also discuss the potential impacts of introduced marine parasites on native ecosystems.

Parasitology↗
USGS2005

Biology and conservation of Xantus's Murrelet: Discovery, taxonomy and distribution

The biology of Xantus's Murrelets Synthliboramphus hypoleucus is similar in many respects to better-studied Ancient Murrelets S. antiquus, especially regarding morphology and the species' precocial mode of post-hatching development. It nests mainly in rock crevices but also under shrubs on islands in southern California, United States, and northwestern Baja California, Mexico (27 o N to 34 o N). The species was discovered in 1859 by Janos Xantus. Two subspecies ( S. h. hypoleucus and S. h. scrippsi ) are recognized that show limited evidence of interbreeding. At sea, closely related Craveri's Murrelets S. craveri co-occur with Xantus's Murrelets off California and western Baja California during half the year, but the former species has a discrete breeding range in the Gulf of California, Mexico. Breeding was documented at 13 island groups between 1863 and 1976. Post-breeding dispersal as far north as central British Columbia, Canada (c. 52 o N) was observed in the 1940s to 1960s. A few Xantus's Murrelets disperse south of breeding colonies to Magdalena Bay, Baja California (c. 24 o N). The southernmost record is the type specimen collected by Xantus near Cabo San Lucas, Baja California (c. 23 o N). Chief threats to this species include introduced mammalian predators on breeding islands, heightened predation by natural predators in human-modified island habitats, and oil pollution. In January 2005, a Pacific Seabird Group special symposium, "Biology and conservation of the Xantus's Murrelet," highlighted conservation concerns and promoted publication of recent studies of this little-known alcid, with nine symposium papers published in this issue of Marine Ornithology. Much of what we know about Xantus's Murrelets has been learned in recent years, and many aspects of biology remain to be described.

Marine Ornithology: Journal of Seabird Research an↗
USGS2005

Host specificity of Sacculina carcini, a potential biological control agent of the introduced European green crab Carcinus maenas in California

The European green crab, Carcinus maenas , is an introduced marine predator established on the west coast of North America. We conducted laboratory experiments on the host specificity of a natural enemy of the green crab, the parasitic barnacle Sacculina carcini , to provide information on the safety of its use as a possible biological control agent. Four species of non-target, native California crabs ( Hemigrapsus oregonensis , H. nudus , Pachygrapsus crassipes and Cancer magister ) were exposed to infective larvae of S. carcini . Settlement by S. carcini on the four native species ranged from 33 to 53%, compared to 79% for green crabs. Overall, cyprid larvae tended to settle in higher numbers on individual green crabs than on either C. magister or H. oregonensis . However, for C. magister this difference was significant for soft-shelled, but not hard-shelled individuals. Up to 29% of the native crabs arrested early infections by melanizing the rootlets of the parasite. Most native and green crabs settled on by S. carcini became infected, especially when settled on by >3 cyprids. Infected green crabs died at more than twice the rate of uninfected green crabs. In contrast to green crabs, all infected native crabs died without producing an externa (reproductive sac). At high settlement intensities, infected native crabs frequently exhibited neurological symptoms (twitching, loss of movement) before death. These results indicate that use of S. carcini as a biological control agent could result in the death of native crabs. The magnitude of this effect would be proportional to the density of infected green crabs in the environment and the probability that cyprids would contact native crabs in the wild. Potential benefits of biological control should be assessed in relation to these potential non-target effects.

California↗
USGS2007

Survey report of NOAA Ship McArthur II cruises AR-04-04, AR-05-05 and AR-06-03: habitat classification of side scan sonar imagery in support of deep-sea coral/sponge explorations at the Olympic Coast National Marine Sanctuary

Habitat mapping and characterization has been defined as a high-priority management issue for the Olympic Coast National Marine Sanctuary (OCNMS), especially for poorly known deep-sea habitats that may be sensitive to anthropogenic disturbance. As a result, a team of scientists from OCNMS, National Centers for Coastal Ocean Science (NCCOS), and other partnering institutions initiated a series of surveys to assess the distribution of deep-sea coral/sponge assemblages within the sanctuary and to look for evidence of potential anthropogenic impacts in these critical habitats. Initial results indicated that remotely delineating areas of hard bottom substrate through acoustic sensing could be a useful tool to increase the efficiency and success of subsequent ROV-based surveys of the associated deep-sea fauna. Accordingly, side scan sonar surveys were conducted in May 2004, June 2005, and April 2006 aboard the NOAA Ship McArthur II to: (1) obtain additional imagery of the seafloor for broader habitat-mapping coverage of sanctuary waters, and (2) help delineate suitable deep-sea coral-sponge habitat, in areas of both high and low commercial-fishing activities, to serve as sites for surveying-in more detail using an ROV on subsequent cruises, Several regions of the sea floor throughout the OCNMS were surveyed and mosaicked at 1-meter pixel resolution. Imagery from the side scan sonar mapping efforts was integrated with other complementary data from a towed camera sled, ROVs, sedentary samples, and bathymetry records to describe geological and biological (where possible) aspects of habitat. Using a hierarchical deep-water marine benthic classification scheme (Greene et al. 1999), we created a preliminary map of various habitat polygon features for use in a geographical information system (GIS). This report provides a description of the mapping and groundtruthing efforts as well as results of the image classification procedure for each of the areas surveyed.

Washington↗
USGS2003

Comparing marine and terrestrial ecosystems: Implications for the design of coastal marine reserves

Concepts and theory for the design and application of terrestrial reserves is based on our understanding of environmental, ecological, and evolutionary processes responsible for biological diversity and sustainability of terrestrial ecosystems and how humans have influenced these processes. How well this terrestrial -based theory can be applied toward the design and application of reserves in the coastal marine environment depends, in part, on the degree of similarity between these systems. Several marked differences in ecological and evolutionary processes exist between marine and terrestrial ecosystems as ramifications of fundamental differences in their physical environments (i.e., the relative prevalence of air and water) and contemporary patterns of human impacts. Most notably, the great extent and rate of dispersal of nutrients, materials, holoplanktonic organisms, and reproductive propagules of benthic organisms expand scales of connectivity among near-shore communities and ecosystems . Consequently, the "openness" of marine populations, communities, and ecosystems probably has marked influences on their spatial, genetic, and trophic structures and dynamics in ways experienced by only some terrestrial species. Such differences appear to be particularly significant for the kinds of organisms most exploited and targeted for protection in coastal marine ecosystems (fishes and macroinvertebrates). These and other differences imply some unique design criteria and application of reserves in the marine environment. In explaining the implications of these differences for marine reserve design and application, we identify many of the environmental and ecological processes and design criteria necessary for consideration in the development of the analytical approaches developed elsewhere in this Special Issue.

Ecological Applications↗
USGS1998

Metal concentrations in surface sediments of Boston Harbor: Changes with time

The concentrations of metals in surface sediments of Boston Harbor have decreased during the period 1977–1993. This conclusion is supported by analysis of: (1) surface sediments collected at monitoring stations in the outer harbor between 1977 and 1993; (2) metal concentration profiles in sediment cores from depositional areas of the harbor; and (3) historical data from a contaminated-sediment database, which includes information on metal and organic contaminants and sediment texture. The background and matrix-corrected concentrations of lead (Pb) measured in the surficial layer (0–2 cm) of cores decreased by an average of 46%±12% among four locations in the outer harbor during the 16 y period. Chromium (Cr), copper (Cu), mercury (Hg), silver (Ag), and zinc (Zn) exhibited similar trends. Results from our sediment sampling are supported by historical data that were compiled from diverse sources into a regional sediment database. This sediment database contains approximately 3000 samples; of these, about 460 samples were collected and analyzed for Cu, Hg, or Zn and many other sediment parameters in Boston Harbor surface sediments between 1971–1993. The database indicates that the concentrations of these three metals also decreased with time in Boston’s Inner Harbor. The decreases in metal concentrations that are observed in more recent years parallel a general decrease in the flux of metals to the harbor, implemented by: (1) ending the sewage sludge discharge to the Harbor in December, 1991; (2) greater source reduction (e.g. recovery of silver from photographic processing) and closing or moving of industries; (3) improvements in wastewater handling and sewage treatment; and (4) diminishing use of lead in gasoline beginning about 1973. Despite the general decrease in metal concentrations in Boston Harbor surface sediments, the concentrations of Ag and Hg measured at some outer harbor stations in 1993 were still at, or above, the level associated with frequent adverse effects to marine organisms (guidelines are: Ag 3.7 μ g g −1 , Hg 1.17 μ g g −1 , from Long et al., 1995 ). Concentrations of the other metals listed were in the range considered to occasionally induce adverse biological effects.

Massachusetts↗