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At least 199 records · Page 11Linked to original sources
USGS2009

Effects of introduced fish on macroinvertebrate communities in historically fishless headwater and kettle lakes

Widespread fish introductions have led to a worldwide decline in the number of fishless lakes and their associated communities. Studies assessing effects of fish stocking on native communities in historically fishless lakes have been limited to high-elevation headwater lakes stocked with non-native trout. Little is known about the effect of fish stocking in historically fishless and hydrologically isolated lowland kettle lakes. We compared the effects of introduced fish on macroinvertebrate communities in kettle lakes stocked with centrarchids, salmonids, and cyprinids, and headwater lakes stocked with brook trout ( Salvelinus fontinalis ) in Maine, USA. Fish had significant effects on macroinvertebrate community structure in both lake types, with reduced species richness and abundances of taxa characteristic of fishless lakes. The effects of introduced fish were more pronounced in headwater lakes despite a less diverse fish assemblage than in kettle lakes. We attribute this to abundant submerged vegetation providing refuge from fish predation and reduced stocking frequency in kettle lakes. We assessed effects of stocking duration on macroinvertebrates in a subset of headwater lakes with known dates of trout introduction. Species richness and abundance of most taxa declined within 3 years following trout introduction; however, richness and abundance were least in lakes with long stocking histories (≥40 years). Macroinvertebrates previously identified as fishless bioindicators were absent from all stocked lakes, indicating that trout rapidly eliminate these sensitive taxa. Conservation of this historically undervalued ecosystem requires protecting remaining fishless lakes and recovering those that have been stocked.

Maine↗
USGS2025

Ice Age biogeography corresponds with current climate vulnerability of freshwater fishes

1. Both local environmental factors and historical biogeography shape ecological communities, but determining which historical biogeographical patterns correspond with contemporary climate vulnerability is an underused conservation method. The historical colonization patterns of freshwater fishes following the Pleistocene (“Ice Age”) glaciations offers an ideal model for comparing historical biogeography and climate-change vulnerability. 2. We used current thermal niches and future stream-temperature projections to estimate the climate vulnerability of 29 Great Plains and Rocky Mountain fishes that we classified as either early or late colonists of the region in the wake of glacial retreat (~19,000 years ago). 3. Ninety-three percent of the most vulnerable species were amongst the earliest colonists of the region and we consider them “postglacial-pioneer species”. Median predicted site loss (number of historically occupied sites predicted to become too warm by end-of-century) was 0% for late colonizing species and 33% for early colonizing species. 4. We provide empirical evidence that postglacial-pioneer fishes are uniquely vulnerable to climate change, and we suggest this may apply to many taxa from formerly glaciated regions. More broadly, we demonstrate that evaluating the relationship between current species-environment patterns and historical biogeography may be a fruitful avenue for future climate change and conservation research.

North America↗
USGS2008

Post-breeding habitat use by adult Boreal Toads (Bufo boreas) after wildfire in Glacier National Park, USA

Effects of wildfire on amphibians are complex, and some species may benefit from the severe disturbance of stand-replacing fire. Boreal Toads (Bufo boreas boreas) in Glacier National Park, Montana, USA increased in occurrence after fires in 2001 and 2003. We used radio telemetry to track adult B. boreas in a mosaic of terrestrial habitats with different burn severities to better understand factors related to the post-fire pulse in breeding activity. Toads used severely burned habitats more than expected and partially burned habitats less than expected. No toads were relocated in unburned habitat, but little of the study area was unburned and the expected number of observations in unburned habitat was < 3. High vagility of B. boreas and preference for open habitats may predispose this species to exploit recently disturbed landscapes. The long-term consequences of fire suppression likely have had different effects in different parts of the range of B. boreas. More information is needed, particularly in the northern Rocky Mountains, where toads are more likely to occupy habitats that have diverged from historic fire return intervals. Copyright ?? 2008. C. Gregory Guscio. All rights reserved.

Herpetological Conservation and Biology↗
USGS2006

Effects of urbanization on stream ecosystems in the South Platte River basin, Colorado and Wyoming

This report describes the effects of urbanization on physical, chemical, and biological characteristics of stream ecosystems in 28 basins along an urban land-use gradient in the South Platte River Basin, Colorado and Wyoming, from 2002 through 2003. Study basins were chosen to minimize natural variability among basins due to factors such as geology, elevation, and climate and to maximize coverage of different stages of urban development among basins. Because land use or population density alone often are not a complete measure of urbanization, land use, land cover, infrastructure, and socioeconomic variables were integrated in a multimetric urban intensity index to represent the degree of urban development in each study basin. Physical characteristics studied included stream hydrology, stream temperature, and habitat; chemical characteristics studied included nutrients, pesticides, suspended sediment, sulfate, chloride, and fecal bacteria concentrations; and biological characteristics studied included algae, fish, and invertebrate communities. Semipermeable membrane devices (SPMDs), passive samplers that concentrate trace levels of hydrophobic organic contaminants like polycyclic aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs), also were used. The objectives of the study were to (1) examine physical, chemical, and biological responses along the gradient of urbanization; (2) determine the major physical, chemical, and landscape variables affecting the structure of aquatic communities; and (3) evaluate the relevance of the results to the management of water resources in the South Platte River Basin. Commonly observed effects of urbanization on instream physical, chemical, and biological characteristics, such as increased flashiness, higher magnitude and more frequent peak flows, increased concentrations of chemicals, and changes in aquatic community structure, generally were not observed in this study. None of the hydrologic, temperature, habitat, or chemical variables were correlated strongly (Spearman's rho greater than or equal to 0.7) with urban intensity, with the exception of some of the SPMD-based toxicity and chemical variables. SPMD-based measures of potential toxicity and PAH concentrations were positively correlated with urban intensity. The PAH concentrations also were positively correlated with measures of road density and negatively correlated with distance to the nearest road, indicating that automobile exhaust is a major source of these compounds in the study area. This source may be localized enough that the transport of PAHs would be minimally affected by water-management practices such as diversion or storage upstream. In contrast, the predominant sources of nutrients, bacteria, suspended sediment, sulfate, chloride, and pesticides may be more dispersed throughout the drainage area and, therefore, their transport to downstream sites may be subject to greater disruption by water regulation. Although no direct link was found between most water-chemistry characteristics and urbanization, invertebrate, algae, and fish-community characteristics were strongly associated with nutrients, pesticides, sulfate, chloride, and suspended sediment. None of the biological community variables were strongly correlated with the urban intensity index. Algal biomass predominantly was associated with total nitrogen concentrations, nitrite-plus-nitrate concentrations, and the duration of high flows. Fish communities predominantly were associated with housing age, the percentage of suspended sediment finer than 0.063 millimeters and chloride concentrations. Invertebrate communities predominantly were associated with the frequency of rising and falling flow events, the duration of high flows, total nitrogen concentrations, nitrite-plus-nitrate concentrations, and total herbicide concentrations. Historical records indicate that aquatic communities in the region may have been altered prior to any substantial urban development by early agricultural and water-management practices. Present-day aquatic communities are composed primarily of tolerant species even in areas of minimal urban development; when development does occur, the communities already may be resistant to disturbance. In addition to the effects of historical stressors on aquatic community structure, it is possible that current water-management practices in the study basins are having an effect. In the absence of natural, unaltered hydrologic conditions, more sensitive taxa may be unable to recolonize urban streams. The movement and storage of water also may lead to a disconnect between the land surface and streams, resulting in instream physical, chemical, and biological characteristics that, to some degree, are independent of land-cover characteristics.

Colorado, Wyoming↗
USGS2015

Applied Geochemistry Special Issue on Environmental geochemistry of modern mining

Environmental geochemistry is an integral part of the mine-life cycle, particularly for modern mining. The critical importance of environmental geochemistry begins with pre-mining baseline characterization and the assessment of environmental risks related to mining, continues through active mining especially in water and waste management practices, and culminates in mine closure. The enhanced significance of environmental geochemistry to modern mining has arisen from an increased knowledge of the impacts that historical and active mining can have on the environment, and from new regulations meant to guard against these impacts. New regulations are commonly motivated by advances in the scientific understanding of the environmental impacts of past mining. The impacts can be physical, chemical, and biological in nature. The physical challenges typically fall within the purview of engineers, whereas the chemical and biological challenges typically require a multidisciplinary array of expertise including geologists, geochemists, hydrologists, microbiologists, and biologists. The modern mine-permitting process throughout most of the world now requires that potential risks be assessed prior to the start of mining. The strategies for this risk assessment include a thorough characterization of pre-mining baseline conditions and the identification of risks specifically related to the manner in which the ore will be mined and processed, how water and waste products will be managed, and what the final configuration of the post-mining landscape will be. In the Fall 2010, the Society of Economic Geologists held a short course in conjunction with the annual meeting of the Geological Society of America in Denver, Colorado (USA) to examine the environmental geochemistry of modern mining. The intent was to focus on issues that are pertinent to current and future mines, as opposed to abandoned mines, which have been the focus of numerous previous short courses. The geochemical challenges of current and future mines share similarities with abandoned mines, but differences also exist. Mining and ore processing techniques have changed; the environmental footprint of waste materials has changed; environmental protection has become a more integral part of the mine planning process; and most historical mining was done with limited regard for the environment. The 17 papers in this special issue evolved from the Society of Economic Geologists’ short course. The relevant geochemical processes encompass the source, transport, and fate of contaminants related to the life cycle of a mine. Contaminants include metals and other inorganic species derived from geologic sources such as ore and solid mine waste, and substances brought to the site for ore processing, such as cyanide to leach gold. Factors, such as mine-waste mineralogy, hydrologic setting, mine-drainage chemistry, and microbial activity, that affect the hydrochemical risks from mining are reviewed by Nordstrom et al. In another paper, Nordstrom discusses baseline characterization at mine sites in a regulatory framework, and emphasizes the influence of mineral deposits in producing naturally elevated concentrations of many trace elements in surface water and groundwater. Surface water quality in mineralized watersheds is influenced by a number of processes that act on daily (diel) cycles and can produce dramatic variations in trace element concentrations as described by Gammons et al. Pre-mining baseline characterization studies should strive to capture the magnitude of these diel variations. Desbarats et al., using a case study of mine drainage from a gold mine, illustrate how elements that commonly occur as negatively charged species (anions) in solution, such as arsenic as arsenate, behave in an opposite fashion than most metals, which occur as positively charged species (cations). Significant improvement in the understanding of factors that influence the toxicity of metals to aquatic organisms in surface water has highlighted the importance of aqueous chemistry, particularly dissolved organic carbon, as described by Smith et al. Stream sediment contamination is another important pathway for affecting aquatic organisms, as reviewed by Besser et al. Understanding and predicting environmental consequences from mining begins with knowing the mineralogy and mineral reactivity of the ore, the wastes, and of secondary minerals formed later. Jamieson et al. review the importance of mineralogical studies in mine planning and remediation. A number of types of site-specific studies are needed to identify environmental risks related to individual mines. Lapakko reviews the general framework of mine waste characterization studies that are integral to the mine planning process. Hageman et al. present a comparative study of several static tests commonly used to characterize mine waste. The mining and ore processing practices employed at a specific mine site will vary on the basis of the commodities being targeted, the geology of the deposit, the geometry of the deposit, and the mining and ore processing methods used. Thus, these factors, in addition to the waste management practices used, can result in a variety of end-member mine waste features, each of which has its own set of challenges. Open pit mines and underground mines require waste rock to be removed to access ore. Waste rock presents unique problems because the rock is commonly mineralized at sub-economic grades and has not been processed to remove potentially problematic minerals, such as pyrite. Amos et al. examine the salient aspects of the geochemistry of waste rock. Mill tailings – the waste material after ore minerals have been removed – are a volumetrically important solid waste at many mine sites. Their fine grain size and the options for their management make their behavior in the environment distinct from that of waste rock. Lindsay et al. describe some of these differences through three case-study examples. Subaqueous disposal of tailings is another option described by Moncur et al. Cyanide leaching for gold extraction is a common method throughout the world. Johnson describes environmental aspects of cyanidation. Uranium mining presents unique environmental challenges, particularly since in-situ recovery has seen widespread use. Campbell et al. review the environmental geochemistry of uranium mining and current research on bioremediation. Ore concentrates from many types of metal mining undergo a pyrometallurgical technique known as smelting to extract the metal. Slag is the result of smelting, and it may be an environmental liability or a valuable byproduct, as described by Piatak et al. Finally, the open pits that result from surface mining commonly reach below the water table. At the end of mining, these pits may fill to form lakes that become part of the legacy of the mine. Castendyk et al., in two papers, review theoretical aspects of the environmental limnology of pit lakes. They also describe approaches that have been used to model pit lake water balance, wall-rock contributions to pit lake chemistry, pit lake water quality, and limnological processes, such as vertical mixing, through the use of three case studies.

Applied Geochemistry↗
USGS2002

Flux of dissolved forms of mercury across the sediment-water interface in Lahontan Reservoir, Nevada

Field and laboratory studies were conducted between April 30, 2001 and July 19, 2001 to provide the first direct measurements of the benthic flux of dissolved (0.2-micrometer filtered) mercury species (total and methylated forms) between the bottom sediment and water column at three sites: two in the southern lobe and one in the northern lobe of Lahontan Reservoir, Nevada (Background, Fig. 1). Dissolved-mercury species and predominant ligands (represented by dissolved organic carbon, and sulfides) were the solutes of primary interest. Benthic flux, sometimes referred to as internal recycling, represents the transport of dissolved chemical species between the water column and the underlying sediment. Water-quality managers often assess and prioritize remediation strategies for aquatic systems, in particular Super Fund sites that have been adversely affected by anthropogenic activities. In the case of the Lahontan Reservoir along the Carson River, mercury associated with historic gold and silver extraction has been fluvially transported and accumulated in the bottom sediments. Frequent demands have been made by Super Fund site managers and the general public to quantify the connections between fluxes of contaminants and the health, abundance, and distribution of biological resources (Kuwabara and others, 1999). As part of a comprehensive examination of transport processes affecting mercury dynamics in Lahontan Reservoir, this study focuses on a poorly understood, yet potentially predominant, source of mercury to the reservoir water column, which is internal recycling, or benthic flux of mercury species and associated ligands. Mobilization, flux, and biological availability of mercury into the water column of the reservoir are affected by physical (e.g., advection and diffusion), chemical (i.e., oxidationreduction reactions, complexation and repartitioning) and biological processes (Flegal and others, 1991; Kuwabara and others, 1996; Grenz and others, 2000, Topping and others, 2001). The results described herein followed from the integration of current project studies with information needs identified by the U.S. Environmental Protection Agency, Region 9 (USEPA) to provide initial determinations of dissolved total and methyl-mercury fluxes from the sediments into the water column of Lahontan Reservoir. Recent mercury distribution and transformation studies in the Carson River system by Marvin-Dipasquale and others (2001) indicated the potential importance of sediment-water interactions in describing mercury speciation, its sources and sinks. Quantifying and understanding the magnitude and variability of these interactions are critical to the accurate assessment of contaminant sources and loads as well as to the development of process-integrated water-quality models for this mining-affected system. With a variety of strategies under consideration to determine how to most efficiently improve the water quality in the Carson River system, the primary question posed in this study was, “What processes regulate the fate and transport of mercury species in Lahontan Reservoir? In particular, are sources and sinks of dissolved total and methyl mercury associated with the bottom sediment within Lahontan Reservoir significant relative to major surface-water inputs from the Carson River?” The question was motivated by a number of factors. First, extraction of precious metals up gradient of the reservoir provide a historic source of elemental mercury that continues to be fluvially transported in dissolved and particulate phases (Hoffman and Taylor, 1998; Carroll and others, 2000; Carroll and Warwick, 2001). Elevated total and methyl mercury concentrations into the reservoir have been well documented (Priessler and others, 1999; Jones and others, 1999; Allander and others, 2001, Marvin-Dipasquale and others, 2001). Therefore, determining whether some fraction of this sediment-associated mercury can remobilize for transport to the overlying water and subsequently to down-stream portions of the Carson River is necessary. Second, elevated concentrations of mercury species in reservoir water, sediment, and fish have prompted a compilation, and comparison of dominant contaminant sources so that appropriate remedial strategies can be designed and implemented. Third, changes in oxidizing or reducing (redox) conditions and nutrient availability near the sediment-water interface (e.g., during phytoplankton blooms) can dramatically alter the mobility of metals and ligands associated with the bottom sediment as episodic sources of carbon settle out and accumulate (Thompson and others, 1981). Finally, there is a growing body of evidence from other aquatic systems that benthic flux or internal recycling of contaminants and nutrients is an important process to consider in developing appropriate ecosystem water-quality models (Wood and others, 1995; Kuwabara and others, 2000). The need for more refined numerical and conceptual models for mercury dynamics within the Carson River system thus clearly exists. This report is formatted unconventionally in a pyramid-like structure to effectively serve the needs of diverse parties interested in reviewing or acquiring information at various levels of detail (Appendix 1). The report enables quick transitions between the initial summary information (figuratively at the top of the pyramid) and later details of methods or results (that is, figuratively towards the base) using hyperlinks to supporting figures and tables, and an electronically linked Table of Contents.

Nebraska↗
USGS1997

Kauai's endangered solitaires: Update on population status and distribution 1996

The puaioihi ( Myadestes palmeri ) and the kamao ( M. myadestinus ) are endangered solitaires endemic to Kauai in the Hawaiian Islands and now restricted to the Alakai Swamp. The puaiohi has been rare historically with population estimates declining since the first population surveys 1968-73. Puaiohi were believed to be on the verge of extinction with population estimates less than 35 birds since 1981. In 1995 intensive studies of the breeding biology and population status of the puaiohi began using mist netting, color banding, spot mapping, and surveys. Fifty active nests were discovered and 63-75 birds monitored at the Koaie study site. Seven survey expeditions in 1996 detected 55-70 more puaiohi from 6 of 8 main river drainages of four survey areas explored. Although still rare and vulnerable to extinction (145±19 individuals known), puaiohi are more widely distributed within the Alakai Swamp than previously believed. Our data from 1996 suggest previous surveys methods have underestimated the population size or that the population has increased since 1981. The kamao has not been confirmed since 1985, but unconfirmed reports were made from 1989-1996. We have not sighted kamao to date despite intensive search efforts. We infer from detection probabilities that the species in highly likely to be extinct.

Hawaii↗
USGS2019

Biocrust science and global change

Global environmental changes such as climate and land‐use change affect ecosystems worldwide, and this New Phytologist Virtual Issue brings together fundamental research questions and novel approaches associated with the study of biological soil crusts in the context of such shifts. In a changing world, organisms can display a limited set of responses that will determine their persistence over varied spatial and temporal scales. Specifically, organisms might tolerate the change – for example, via phenotypic plasticity – and remain present in local communities. Alternatively, organisms might shift or retract their range to match their historical niche, they may adapt to the directional selection pressures imposed by change, or they could be driven to local (and possibly global) extinction. Efforts to understand which of these responses particular plant species or assemblages will exhibit are necessary for predicting changes in ecosystem functioning and trophic interactions under global change scenarios, and for managing and supporting sustainable terrestrial ecosystems. Accordingly, the assessment of plant responses to global change has become a significant research focus. Despite this impressive effort, our understanding and combined work to measure the responses to global change for species and communities of nonvascular autotrophs, such as the cyanobacteria, lichens, and bryophytes that form biological soil crusts (Fig. 1), remain rare compared with the large focus on vascular plants (Fig. 2; Reed et al., 2016). Nevertheless, these nonvascular photosynthetic communities and their responses to change could have critical implications for determining ecosystem structure and function at the global‐scale (Elbert et al., 2012; Ferrenberg et al., 2017; Rodriguez‐Caballero et al., 2018).

New Phytologist↗
USGS2023

Rivers of the Lower Mississippi Basin

Discussed in this chapter are seven significant tributaries of the Lower Mississippi River and its major distributary. As a group, these eight rivers and their basins encompass substantial variation in physical form, hydrology, biota, ecology, and human impacts. The Current River, Ouachita River, and Saline River, flow to the Mississippi out of the U.S. Interior Highlands. The Cache River basin, centered in Arkansas, contains a vast expanse of bottomland hardwood forest and is famous for wintering waterfowl. The Hatchie River, flowing west out of Tennessee, is the longest free-flowing tributary of the Lower Mississippi River and famous for its rich diversity of mussels and fishes. The Wolf River of Tennessee supports a magnificent bald cypress-tupelo swamp and is notable as a protected urban river that flows through Memphis. The Big Sunflower River begins and ends in the alluvial floodplain of the Mississippi River and flows through a basin of intense agriculture and historical human conflict. The Atchafalaya River, the primary distributary of the Mississippi River, supports the nation's largest expanse of bottomland hardwood forest and swamp wetlands. In this chapter, we review the physiography, geomorphology, hydrology, water chemistry, land use, biological diversity, ecological processes, human impacts, and areas of need for research and management of each of these eight rivers and their basins.

Lower Mississippi River basin↗
USGS2001

Burrowing mayflies ( Hexagenia ) as indicators of ecosystem health

Three State of the Lakes Ecosystem Conferences have been held since 1996 to encourage the development of Great Lakes indicators of ecosystem health for use in reporting on progress in restoring and maintaining the chemical, physical and biological integrity of the Great Lakes ecosystem. Here we report on the development of an indicator based on burrowing mayflies , Hexagenia (Ephemeroptera: Ephemeridae), using production and biomass as the indicator metrics. Burrowing mayflies were selected because they (1) were historically abundant in unpolluted, soft-bottomed mesotrophic habitats throughout the Great Lakes, (2) are intolerant of and were extirpated by pollution in most of those habitats during the 1940s to1950s, (3) have shown the ability to recover in one of those habitats following pollution abatement, (4) are ecologically important as bioturbators of lakebed sediments and as trophic integrators that link detrital energy resources directly to fishes that feed preferentially on them, and (5) have highly visible mating flights, which carry the message directly to an informed public that the source water body is healthy. In addition, their annual production can be estimated from their mean annual biomass by the sizefrequency method. Productivity and biomass can also could be estimated with a 'cohort-direct' method, using the biomass of mature nymphs collected in May or early June from the cohort that is about to emerge as subimagos in late June or early July. Although both the size-frequency and cohort-direct methods provide reliable estimates of productivity and biomass, the latter method greatly reduces sample collection and processing effort and thus makes it feasible to use Hexagenia as an indicator of ecosystem health in surveys requiring the collection of large numbers of samples.

Aquatic Ecosystem Health & Management↗
USGS1978

Historical profile, Quality of Water Laboratories, U. S. Geological Survey

During the period 1918 to 1973 the U.S. Geological Survey, Water Resources Division, established 22 District-type water quality laboratories. These facilities provided the analytical capability and water-quality information for hydrologic investigations and the national baseline inventory of chemical, physical, fluvial sediment, and biological characteristics of surface and ground waters in the United States. Prior to 1950, most methods used in the laboratory were gravimetric, colorimetric, or titrimetric. Flame photometric equipment was common to most laboratories in the 1950's, and the atomic absorption spectrophotometer was added to larger laboratories in the 1960's. In the late 1960's, the first of the automatic analyzers was installed. Total annual production averaged about 480 adjusted complete analyses during the early years 1919-28, about 7,800 in 1946, and about 50,000 in 1970. Budget estimates for the majority of laboratories ranged from $25,000 to $50,000 (1940-50) and $75,000 to $300,000 (1965-73). Beginning in 1972, major functions of the 22 laboratories have been combined into two comprehensive highly-automated facilities located at Denver (Arvada), Colo., and Atlanta (Doraville), Ga. These laboratories comprise the Central Laboratory System for the U.S. Geological Survey. (Woodard-USGS)

Open-File Report↗
USGS1987

HYDROBIOLOGICAL CHARACTERISTICS OF THE COASTAL LAGOONS AT HUGH TAYLOR BIRCH STATE RECREATION AREA, FORT LAUDERDALE, FLORIDA: A HISTORICAL PERSPECTIVE.

The author presents initial results of an ongoing study of Southeast Florida coastal lagoon lakes. Objectives include presenting environmental conditions within and adjacent to the lagoons under a variety of hydrologic conditions and to determine water-quality changes in ground water and surface water and how these changes in water quality affect lagoonal biological communities within the lagoons.

Conference Paper↗
USGS2019

Water-quality, bed-sediment, and biological data (October 2016 through September 2017) and statistical summaries of data for streams in the Clark Fork Basin, Montana

Water, bed sediment, and biota were sampled in selected streams from Butte to near Missoula, Montana, as part of a monitoring program in the Clark Fork Basin of western Montana. The sampling program was led by the U.S. Geological Survey, in cooperation with the U.S. Environmental Protection Agency, to characterize aquatic resources in the Clark Fork Basin and emphasize trace elements associated with historic mining and smelting activities. Sampling sites were on the Clark Fork and selected tributaries. Water samples were collected periodically at 20 sites from October 2016 through September 2017. Bed-sediment and biota samples were collected once at 13 sites during August 2017. This report presents the analytical results and quality-assurance data for water-quality, bed-sediment, and biota samples collected at sites from October 2016 through September 2017. Water-quality data include concentrations of selected major ions, dissolved organic carbon, turbidity, nitrogen (nitrate plus nitrite), trace elements, and suspended sediment. Seasonal daily values of turbidity were determined at four sites. Bed-sediment data include trace-element concentrations in the fine-grained (less than 0.063 millimeter) fraction. Biological data include trace-element concentrations in whole-body tissue of aquatic benthic insects. Statistical summaries of water-quality, bed-sediment, and biological data for sites in the Clark Fork Basin are provided for the period of record.

Montana↗
USGS2006

Sedimentation and Occurrence and Trends of Selected Chemical Constituents in Bottom Sediment, Empire Lake, Cherokee County, Kansas, 1905-2005

For about 100 years (1850-1950), the Tri-State Mining District in parts of southeast Kansas, southwest Missouri, and northeast Oklahoma was one of the primary sources of lead and zinc ore in the world. The mining activity in the Tri-State District has resulted in substantial historical and ongoing input of cadmium, lead, and zinc to the environment including Empire Lake in Cherokee County, southeast Kansas. The environmental contamination caused by the decades of mining activity resulted in southeast Cherokee County being listed on the U.S. Environmental Protection Agency's National Priority List as a superfund hazardous waste site in 1983. To provide some of the information needed to support efforts to restore the ecological health of Empire Lake, a 2-year study was begun by the U.S. Geological Survey in cooperation with the U.S. Fish and Wildlife Service and the Kansas Department of Health and Environment. A combination of sediment-thickness mapping and bottom-sediment coring was used to investigate sediment deposition and the occurrence of cadmium, lead, zinc, and other selected constituents in the bottom sediment of Empire Lake. The total estimated volume and mass of bottom sediment in Empire Lake were 44 million cubic feet and 2,400 million pounds, respectively. Most of the bottom sediment was located in the main body and the Shoal Creek arm of the reservoir. Minimal sedimentation was evident in the Spring River arm of the reservoir. The total mass of cadmium, lead, and zinc in the bottom sediment of Empire Lake was estimated to be 78,000 pounds, 650,000 pounds, and 12 million pounds, respectively. In the bottom sediment of Empire Lake, cadmium concentrations ranged from 7.3 to 76 mg/kg (milligrams per kilogram) with an overall median concentration of 29 mg/kg. Compared to an estimated background concentration of 0.4 mg/kg, the historical mining activity increased the median cadmium concentration by about 7,200 percent. Lead concentrations ranged from 100 to 950 mg/kg with an overall median concentration of 270 mg/kg. Compared to an estimated background concentration of 33 mg/kg, the median lead concentration was increased by about 720 percent as a result of mining activities. The range in zinc concentrations was 1,300 to 13,000 mg/kg with an overall median concentration of 4,900 mg/kg. Compared to an estimated background concentration of 92 mg/kg, the median zinc concentration was increased by about 5,200 percent. Within Empire Lake, the largest sediment concentrations of cadmium, lead, and zinc were measured in the main body of the reservoir. Within the Spring River arm of the reservoir, increased concentrations in the downstream direction likely were the result of tributary inflow from Short Creek, which drains an area that has been substantially affected by historical lead and zinc mining. Compared to nonenforceable sediment-quality guidelines, all Empire Lake sediment samples (representing 21 coring sites) had cadmium concentrations that exceeded the probable-effects guideline (4.98 mg/kg), which represents the concentration above which toxic biological effects usually or frequently occur. With one exception, cadmium concentrations exceeded the probable-effects guideline by about 180 to about 1,400 percent. With one exception, all sediment samples had lead concentrations that exceeded the probable-effects guideline (128 mg/kg) by about 10 to about 640 percent. All sediment samples had zinc concentrations that exceeded the probable-effects guideline (459 mg/kg) by about 180 to about 2,700 percent. Overall, cadmium, lead, and zinc concentrations in the bottom sediment of Empire Lake have decreased over time following the end of lead and zinc mining in the area. However, the concentrations in the most recently deposited bottom sediment (determined for 4 of 21 coring sites) still exceeded the probable-effects guideline by about 440 to 640 percent for cadmium, about 40 to 80 percent for lead, and about 580

Scientific Investigations Report↗
USGS2016

Demographic mechanisms underpinning genetic assimilation of remnant groups of a large carnivore

Current range expansions of large terrestrial carnivores are occurring following human-induced range contraction. Contractions are often incomplete, leaving small remnant groups in refugia throughout the former range. Little is known about the underlying ecological and evolutionary processes that influence how remnant groups are affected during range expansion. We used data from a spatially explicit, long-term genetic sampling effort of grizzly bears ( Ursus arctos ) in the Northern Continental Divide Ecosystem (NCDE), USA, to identify the demographic processes underlying spatial and temporal patterns of genetic diversity. We conducted parentage analysis to evaluate how reproductive success and dispersal contribute to spatio-temporal patterns of genetic diversity in remnant groups of grizzly bears existing in the southwestern (SW), southeastern (SE) and east-central (EC) regions of the NCDE. A few reproductively dominant individuals and local inbreeding caused low genetic diversity in peripheral regions that may have persisted for multiple generations before eroding rapidly (approx. one generation) during population expansion. Our results highlight that individual-level genetic and reproductive dynamics play critical roles during genetic assimilation, and show that spatial patterns of genetic diversity on the leading edge of an expansion may result from historical demographic patterns that are highly ephemeral.

Northern Continental Divide Ecosystem↗
USGS2014

Assessing streamflow sensitivity to variations in glacier mass balance

The mountains ringing the Gulf of Alaska (GOA) receive upwards of 4–8 m yr −1 of precipitation (Simpson et al.2005; Weingartner et al. 2005; O’Neel 2012), much of which runs off into productive coastal waters. The alpine landscape is heavily glacierized, and storage and turnover of water by glaciers substantially influences the regional surface water balance (Neal et al. 2010). In turn, the land-to-ocean flux of freshwater impacts the biogeochemistry, physical oceanography, freshwater and marine ecology of the downstream components of the GOA ecosystem (e.g., Royer et al. 2001; Hood and Scott 2008). In this way, the links between terrestrial and ocean ecosystems along the GOA have widespread impacts on regional socioeconomic issues including water and hydropower resources, fish populations, and sea level change (Dorava and Milner 2000; Royer and Grosch 2006; Cherry et al. 2010; Gardner et al. 2013). Moreover, predicting future changes in physical, chemical and biological processes in near-shore ecosystems along the GOA hinges, in part, on developing a robust understanding of water storage and transfer by glaciers through streams to the ocean. Glacierized basins (i.e. presently ice covered as opposed to glaciated, or historically ice covered) are very efficient producers of runoff, yielding 2–10 times greater runoff than similarly sized, non-glacierized basins (Mayo 1984). The unique energy balance that characterizes these basins (Jansson et al. 2003; Hock 2005) results in substantial alterations to streamflow, even when fractional ice coverage is very small (Stahl and Moore 2006). Consistent and precise treatment of glacier runoff is key to accurate assessment of hydrologic, ecological and socioeconomic impacts, but previously used definitions for glacier runoff are variable. They include: 1) meltwater produced as negative annual mass balance (e.g., Fountain and Tangborn 1985); 2) storage changes in the monthly water budget, where solid precipitation is balanced by melt and evaporation (Huss 2011, concept #2); 3) meltwater derived from melting ice only (irrespective of melting snow or mass balance) (Nolin et al. 2010; Huss 2011, concept #1); 4) all meltwater derived from the glacier surface (Cogley et al. 2011, meltwater runoff); 5) total runoff from the glacier surface (meltwater runoff plus rain on the glacier) (Neal et al. 2010). Total glacier runoff (Definitions 4 and 5 above) includes a contribution from annual mass balance, i.e. the sum of accumulation and ablation through a mass balance year (Definition 1), or what has historically been referred to as the “net” balance (Cogley et al. 2011). Indeed, annual balance has been shown to be an important driver of streamflow trends in glacierized basins, with periods of persistent negative annual balance resulting in statistically significant increases in streamflow (e.g., Pellicciotti et al. 2010). However, in maritime climates, anomalies in glacier runoff can be disconnected from annual balance because of the high variability in winter precipitation. For example, positive anomalies in winter accumulation can result in elevated levels of glacier runoff in times of positive annual mass balance (Thayyen and Gergan 2010). Quantifying the impacts of changing glacier geometries (annual balance) on glacier runoff is essential for predicting future changes in streamflow in glacierized basins. However, determining the role that this component plays in total glacier runoff (Definition 5) requires consistent measurements of seasonal (or shorter period) mass balances, measurements of precipitation at multiple locations within a basin, and streamflow measurements in close proximity to a glacier’s terminus. Practical and logistical challenges associated with assembling such data sets typically preclude such partitioning. As a result, most analyses of the relationship between annual mass balance and streamflow rely on some component of model output to compute glacier runoff (e.g. Huss et al. 2008; Kaser et al. 2010). Ultimately, developing an understanding of how total glacier runoff will change in the future is critical for predicting downstream ecological impacts associated with changes in riverine fluxes of water, sediment, and solutes (e.g., metals and nutrients) to near-shore coastal ecosystems. The purpose of this paper is to evaluate relationships among seasonal and annual glacier mass balances, glacier runoff and streamflow in two glacierized basins in different climate settings. We use long-term glacier mass balance and streamflow datasets from the United States Geological Survey (USGS) Alaska Benchmark Glacier Program to compare and contrast glacier-streamflow interactions in a maritime climate (Wolverine Glacier) with those in a continental climate (Gulkana Glacier). Our overall goal is to improve our understanding of how glacier mass balance processes impact streamflow, ultimately improving our conceptual understanding of the future evolution of glacier runoff in continental and maritime climates.

Alaska↗
USGS2015

Targeting climate diversity in conservation planning to build resilience to climate change

Climate change is raising challenging concerns for systematic conservation planning. Are methods based on the current spatial patterns of biodiversity effective given long-term climate change? Some conservation scientists argue that planning should focus on protecting the abiotic diversity in the landscape, which drives patterns of biological diversity, rather than focusing on the distribution of focal species, which shift in response to climate change. Climate is one important abiotic driver of biodiversity patterns, as different climates host different biological communities and genetic pools. We propose conservation networks that capture the full range of climatic diversity in a region will improve the resilience of biotic communities to climate change compared to networks that do not. In this study we used historical and future hydro-climate projections from the high resolution Basin Characterization Model to explore the utility of directly targeting climatic diversity in planning. Using the spatial planning tool, Marxan, we designed conservation networks to capture the diversity of climate types, at the regional and sub-regional scale, and compared them to networks we designed to capture the diversity of vegetation types. By focusing on the Conservation Lands Network (CLN) of the San Francisco Bay Area as a real-world case study, we compared the potential resilience of networks by examining two factors: the range of climate space captured, and climatic stability to 18 future climates, reflecting different emission scenarios and global climate models. We found that the climate-based network planned at the sub-regional scale captured a greater range of climate space and showed higher climatic stability than the vegetation and regional based-networks. At the same time, differences among network scenarios are small relative to the variance in climate stability across global climate models. Across different projected futures, topographically heterogeneous areas consistently show greater climate stability than homogenous areas. The analysis suggests that utilizing high-resolution climate and hydrological data in conservation planning improves the likely resilience of biodiversity to climate change. We used these analyses to suggest new conservation priorities for the San Francisco Bay Area.

Ecosphere↗
USGS2012

Water-quality, bed-sediment, and biological data (October 2009 through September 2010) and statistical summaries of data for streams in the Clark Fork basin, Montana

Water, bed sediment, and biota were sampled in streams from Butte to near Missoula, Montana, as part of a monitoring program in the upper Clark Fork basin. The sampling program was conducted by the U.S. Geological Survey in cooperation with the U.S. Environmental Protection Agency to characterize aquatic resources in the Clark Fork basin of western Montana, with emphasis on trace elements associated with historic mining and smelting activities. Sampling sites were located on the Clark Fork and selected tributaries. Water samples were collected periodically at 20 sites from October 2009 through September 2010. Bed-sediment and biota samples were collected once at 13 sites during August 2010. This report presents the analytical results and quality-assurance data for water-quality, bed-sediment, and biota samples collected at sites from October 2009 through September 2010. Water-quality data include concentrations of selected major ions, trace elements, and suspended sediment. Turbidity was analyzed for water samples collected at the four sites where seasonal daily values of turbidity were being determined. Daily values of suspended-sediment concentration and suspended-sediment discharge were determined for four sites. Bed-sediment data include trace-element concentrations in the fine-grained fraction. Biological data include trace-element concentrations in whole-body tissue of aquatic benthic insects. Statistical summaries of water-quality, bed-sediment, and biological data for sites in the upper Clark Fork basin are provided for the period of record since 1985.

Montana↗