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At least 199 records · Page 11Linked to original sources
USGS2014

Mycoplasmosis and upper respiratory tract disease of tortoises: a review and update

Tortoise mycoplasmosis is one of the most extensively characterized infectious diseases of chelonians. A 1989 outbreak of upper respiratory tract disease (URTD) in free-ranging Agassiz's desert tortoises ( Gopherus agassizii ) brought together an investigative team of researchers, diagnosticians, pathologists, immunologists and clinicians from multiple institutions and agencies. Electron microscopic studies of affected tortoises revealed a microorganism in close association with the nasal mucosa that subsequently was identified as a new species, Mycoplasma agassizii . Over the next 24 years, a second causative agent, Mycoplasma testudineum , was discovered, the geographic distribution and host range of tortoise mycoplasmosis were expanded, diagnostic tests were developed and refined for antibody and pathogen detection, transmission studies confirmed the pathogenicity of the original M. agassizii isolate, clinical (and subclinical) disease and laboratory abnormalities were characterized, many extrinsic and predisposing factors were found to play a role in morbidity and mortality associated with mycoplasmal infection, and social behavior was implicated in disease transmission. The translation of scientific research into management decisions has sometimes led to undesirable outcomes, such as euthanasia of clinically healthy tortoises. In this article, we review and assess current research on tortoise mycoplasmosis, arguably the most important chronic infectious disease of wild and captive North American and European tortoises, and update the implications for management and conservation of tortoises in the wild.

The Veterinary Journal↗
USGS2012

Response of the North American monsoon to regional changes in ocean surface temperature

The North American monsoon (NAM), an onshore wind shift occurring between July and September, has evolved in character during the Holocene largely due to changes in Northern Hemisphere insolation. Published paleoproxy and modeling studies suggest that prior to ∼8000 cal years BP, the NAM affected a broader region than today, extending westward into the Mojave Desert of California. Holocene proxy SST records from the Gulf of California (GoC) and the adjacent Pacific provide constraints for this changing NAM climatology. Prior to ∼8000 cal years BP, lower GoC SSTs would not have fueled northward surges of tropical moisture up the GoC, which presently contribute most of the monsoon precipitation to the western NAM region. During the early Holocene, the North Pacific High was further north and SSTs in the California Current off Baja California were warmer, allowing monsoonal moisture flow from the subtropical Pacific to take a more direct, northwesterly trajectory into an expanded area of the southwestern U.S. west of 114°W. A new upwelling record off southwest Baja California reveals that enhanced upwelling in the California Current beginning at ∼7500 cal year BP may have triggered a change in NAM climatology, focusing the geographic expression of NAM in the southwest USA into its modern core region east of ∼114°W, in Arizona and New Mexico. Holocene proxy precipitation records from the southwestern U.S. and northwestern Mexico, including lakes, vegetation/pollen, and caves are reviewed and found to be largely supportive of this hypothesis of changing Holocene NAM climatology.

Arizona;Colorado;New Mexico;Texas;Utah↗
USGS2025

Conserving climate-change refugia: Insights from research and practice

As the impacts of anthropogenic climate change increase, conservation of climate-change refugia has become a key strategy for effective environmental stewardship. Over the last 5 years, the field of climate-change refugia conservation has made exciting advances, shifting from concepts and theory to refugia mapping and implementation. However, few studies have advanced to action on the ground; while 84% of studies identified and mapped refugia, only 4% involved implementing management action. Moreover, taxonomic and geographic gaps remain, with most studies focused on terrestrial plants and vertebrates in Europe and North America. Here, we outline impediments to implementation following the steps of the Climate-Change Refugia Conservation Cycle. Based on a systematic literature review, we elucidate advances and obstacles with examples from a diversity of systems and sectors from across the world and highlight emerging work bridging the gap between research and implementation.

Conservation Science and Practice↗
USGS2019

Climate, environment, and disturbance history govern resilience of western North American Forests

Before the advent of intensive forest management and fire suppression, western North American forests exhibited a naturally occurring resistance and resilience to wildfires and other disturbances. Resilience, which encompasses resistance, reflects the amount of disruption an ecosystem can withstand before its structure or organization qualitatively shift to a different basin of attraction. In fire-maintained forests, resilience to disturbance events arose primarily from vegetation pattern-disturbance process interactions at several levels of organization. Using evidence from 15 ecoregions, spanning forests from Canada to Mexico, we review the properties of forests that reinforced qualities of resilience and resistance. We show examples of multi-level landscape resilience, of feedbacks within and among levels, and how conditions have changed under climatic and management influences. We highlight geographic similarities and important differences in the structure and organization of historical landscapes, their forest types, and in the conditions that have changed resilience and resistance to abrupt or large-scale disruptions. We discuss the role of the regional climate in episodically or abruptly reorganizing plant and animal biogeography and forest resilience and resistance to disturbances. We give clear examples of these changes and suggest that managing for resilient forests is a construct that strongly depends on scale and human social values. It involves human communities actively working with the ecosystems they depend on, and the processes that shape them, to adapt landscapes, species, and human communities to climate change while maintaining core ecosystem processes and services. Finally, it compels us to embrace management approaches that incorporate ongoing disturbances and anticipated effects of climatic changes, and to support dynamically shifting patchworks of forest and non-forest. Doing so could make these shifting forest conditions and wildfire regimes less disruptive to individuals and society.

western North America↗
USGS2000

Environmental Contaminants and Terrestrial Vertebrates: Effects on Populations, Communities, and Ecosystems

The desire of resource managers, risk assessors, and the general public to better understand the consequences of environmental contamination has produced a strong and growing need for information on the effects of contaminants on populations and groups of species, and over moderate to large areas of land or water. However, the problems associated with research involving populations and groups of species or large and complex geographic areas, especially in terrestrial environments, are well known within the scientific community. With the previous thoughts in mind, an interactive symposium was held at the University of Maryland in October 1998. The purpose of the symposium was to review and critically evaluate our understanding of the effects of contaminants on terrestrial vertebrates at levels of organization above that of the individual. Invited background and technical presentations provided a common baseline of information for symposium participants. Discussion groups were then asked to critically evaluate the topics of two technical sessions. Several presentations of recent or ongoing research provided participants with examples of current approaches to assessments of the effects of contaminants on terrestrial vertebrates at the population or higher level of organization. The book consists of 10 chapters written by presenters at the symposium and three chapters conveying the reports of discussion group.

SETAC Special Publications Series.↗
USGS2012

Coastal wetlands of Chesapeake Bay

Wetlands are prominent landscapes throughout North America. The general characteristics of wetlands are controversial, thus there has not been a systematic assessment of different types of wetlands in different parts of North America, or a compendium of the threats to their conservation. Wetland Habitats of North America adopts a geographic and habitat approach, in which experts familiar with wetlands from across North America provide analyses and syntheses of their particular region of study. Addressing a broad audience of students, scientists, engineers, environmental managers, and policy makers, this book reviews recent, scientifically rigorous literature directly relevant to understanding, managing, protecting, and restoring wetland ecosystems of North America.

Book chapter↗
USGS2017

Climate change and alpine stream biology: progress, challenges, and opportunities for the future

In alpine regions worldwide, climate change is dramatically altering ecosystems and affecting biodiversity in many ways. For streams, receding alpine glaciers and snowfields, paired with altered precipitation regimes, are driving shifts in hydrology, species distributions, basal resources, and threatening the very existence of some habitats and biota. Alpine streams harbour substantial species and genetic diversity due to significant habitat insularity and environmental heterogeneity. Climate change is expected to affect alpine stream biodiversity across many levels of biological resolution from micro- to macroscopic organisms and genes to communities. Herein, we describe the current state of alpine stream biology from an organism-focused perspective. We begin by reviewing seven standard and emerging approaches that combine to form the current state of the discipline. We follow with a call for increased synthesis across existing approaches to improve understanding of how these imperiled ecosystems are responding to rapid environmental change. We then take a forward-looking viewpoint on how alpine stream biologists can make better use of existing data sets through temporal comparisons, integrate remote sensing and geographic information system (GIS) technologies, and apply genomic tools to refine knowledge of underlying evolutionary processes. We conclude with comments about the future of biodiversity conservation in alpine streams to confront the daunting challenge of mitigating the effects of rapid environmental change in these sentinel ecosystems.

Biological Reviews↗
USGS2026

An evaluation of next-generation biological control methods for the invasive brown treesnake in the Mariana Islands

The brown treesnake (BTS) invasion in Guam continues to cause extensive ecological and economic damage, yet existing control tools cannot achieve islandwide suppression or eradication, highlighting the need for new strategies. This review evaluates the feasibility of classical and genetic biocontrol approaches for BTS and identifies priority knowledge gaps. Classical biocontrol, which relies on pathogens or parasites from a pest’s native range, has had limited success in vertebrates, though certain viruses may hold potential. For BTS, prior work has identified candidate agents, including hemogregarines and paramyxoviruses, but major uncertainties remain in transmission, specificity, long term efficacy, and ecological risk. Theoretical models suggest that moderately virulent pathogens may offer the strongest potential for sustained suppression, with Ophidian paramyxoviruses emerging as a leading prospect, though substantial empirical research is still required. Genetic biocontrol offers additional possibilities, including gene drives that could bias inheritance, reduce fertility, or skew sex ratios. Self sustaining homing and shredding drives could theoretically produce long term reductions, while “enhanced” self limiting systems may provide geographically restricted alternatives. Approaches involving genetically modified prey and toxic males that shorten female lifespan through mating may have future relevance but require major development and validation. Risks across genetic strategies include unintended spread, ecological side effects, technical constraints such as producing engineered snakes, potential resistance, and regulatory complexity. Because feasibility depends on societal acceptance, the review emphasizes the need for early engagement with Guam’s local and Indigenous communities, whose perspectives will shape future development and implementation. Key research priorities include improved modeling, native range genomic characterization of BTS, expanded pathogen surveys, advances in BTS genetic tools and captive rearing methods, and further exploration of both classical pathogen candidates and genetically engineered prey systems. Collectively, the review concludes that classical and genetic biocontrol hold promise for long term, cost effective BTS suppression, but substantial scientific, ethical, ecological, and social groundwork remains before deployment.

Hawai’i Cooperative Fishery Research Unit Technica↗
USGS2020

A critical assessment of human-impact indices based on anthropogenic pollen indicators

Anthropogenic pollen indicators in pollen records are an established tool for reconstructing the history of human impacts on vegetation and landscapes. They are also used to disentangle the influence of human activities and climatic variability on ecosystems. The comprehensive anthropogenic pollen-indicator approach developed by Behre (1981) has been widely used, including beyond its original geographical scope of Central and Western Europe. Uncritical adoption of this approach for other areas is risky because adventives (plants introduced with agriculture) in Central Europe can be apophytes (native plants favoured by human disturbances) in other regions. This problem can be addressed by identifying region-specific, anthropogenic-indicator pollen types and/or developing region-specific, human-impact indices from pollen assemblages. However, understanding of regional variation in the timing and intensity of human impacts is limited by the lack of standardization, validation and intercomparison of such regional approaches. Here we review the most common European anthropogenic pollen-indicator approaches to assess their performance at six sites spanning a continental gradient over the boreal, temperate and Mediterranean biomes. Specifically, we evaluate the human-indicator approaches by using independent archaeological evidence and models. We present new insights into how these methodologies can assist in the interpretation of pollen records as well as into how a careful selection of pollen types and/or indices according to the specific geographical scope of each study is key to obtain meaningful reconstructions of anthropogenic activity through time. The evaluated approaches generally perform better in the regions for which they were developed. However, we find marked differences in their capacity to identify human impact, while some approaches do not perform well even in the regions for which they were developed, others might be used, with due caution, outside their original areas or biomes. We conclude that alongside the increasing wealth of pollen datasets a need to develop novel tools may assist numeric human impact reconstructions.

Quaternary Science Reviews↗
USGS2008

A review of the endemic Hawaiian Drosophilidae and their host plants

The Hawaiian Drosophilidae is one of the best examples of rapid speciation in nature. Nearly 1,000 species of endemic drosophilids have evolved in situ in Hawaii since a single colonist arrived over 25 million years ago. A number of mechanisms, including ecological adaptation, sexual selection, and geographic isolation, have been proposed to explain the evolution of this hyperdiverse group of species. Here, we examine the known ecological associations of 326 species of endemic Hawaiian Drosophilidae in light of the phylogenetic relationships of these species. Our analysis suggests that the long-accepted belief of strict ecological specialization in this group does not hold for all taxa. While many species have a primary host plant family, females will also oviposit on non-preferred host plant taxa. Host shifting is fairly common in some groups, especially the grimshawi and modified mouthparts species groups of Drosophila, and the Scaptomyza subgenus Elmomyza. Associations with types of substrates (bark, leaves, flowers) are more evolutionarily conserved than associations with host plant families. These data not only give us insight into the role ecology has played in the evolution of this large group, but can help in making decisions about the management of rare and endangered host plants and the insects that rely upon them for survival. Copyright ?? 2008 Magnolia Press.

Zootaxa↗
USGS2000

A paleolatitude approach to assessing surface temperature history for use in burial heating models

Calculations using heat flow theory as well as case histories show that over geologic time scales (10 6 years), changes in mean annual surface temperature (T s ) on the order of 10°C penetrate kilometers deep into the crust. Thus, burial heating models of sedimentary basins, which typically span kilometers in depth and persist over geological time frames, should consider T s history to increase their accuracy. In any case, T s history becomes important when it changes enough to be detected by a thermal maturation index like vitrinite reflectance, a parameter widely used to constrain burial heating models. Assessment of the general temperature conditions leading to petroleum generation indicates that changes in T s as small as 6°C can be detected by vitrinite reflectance measurements. This low temperature threshold indicates that oil and gas windows can be significantly influenced by T s history. A review of paleoclimatic factors suggests the significant and geologically resolvable factors affecting T s history are paleolatitude, long-term changes between cool and warm geological periods (climate mode), the degree to which a basin is removed from the sea (geographic isolation), and elevation or depth relative to sea level. Case studies using geologically realistic data ranges or different methods of estimating T s in a burial heating model indicate a significant impact of Ts when: (1) continental drift, subduction, tectonism and erosion significantly change paleolatitude, paleoaltitude, or paleogeography; (2) strata are at, or near, maximum burial, and changes in T s directly influence maximum burial temperature; and (3), when a significant change in T s occurs near the opening or closing of the oil or gas windows causing petroleum generation to begin or cease. Case studies show that during the burial heating and petroleum generation phase of basin development changes in climate mode alone can influence T s by about 15°C. At present, T s changes from the poles to the equator by about 50°C. Thus, in extreme cases, continental drift alone can seemingly produce T s changes on the order of 50°C over a time frame of 107 years.

International Journal of Coal Geology↗
USGS2020

FiCli, the Fish and Climate Change Database, informs climate adaptation and management for freshwater fishes

Inland fishes provide important ecosystem services to communities worldwide and are especially vulnerable to the impacts of climate change. Fish respond to climate change in diverse and nuanced ways, which creates challenges for practitioners of fish conservation, climate change adaptation, and management. Although climate change is known to affect fish globally, a comprehensive online, public database of how climate change has impacted inland fishes worldwide and adaptation or management practices that may address these impacts does not exist. We conducted an extensive, systematic primary literature review to identify peer-reviewed journal publications describing projected and documented examples of climate change impacts on inland fishes. From this standardized Fi sh and Cli mate Change database, FiCli (pronounced fick-lee), researchers and managers can query fish families, species, response types, or geographic locations to obtain summary information on inland fish responses to climate change and recommended management actions. The FiCli database is updatable and provides access to comprehensive published information to inform inland fish conservation and adaptation planning in a changing climate.

Scientific Data↗
USGS2018

Effect of climate change on disease spread in wildlife

A growing body of evidence indicates that climate change alone, or acting synergistically with current anthropogenic threats, is affecting the health of wild populations of aquatic and terrestrial wildlife. Measurable by-products of climate change include elevated atmospheric concentrations of greenhouse gases, higher average global temperatures; variations in global precipitation patterns, rising and warming oceans, altered hydrographs of rivers, and increased mid-continental drying during summer. These consequences affect the terrestrial environment through shifts in phenology, vegetation cover, and fire regimes. Warmer ocean temperatures, increased acidification, rise in sea levels, and reduction in sea ice cover are also leading to widespread ecological changes in marine systems. Wildlife populations face a variety of climate-related pressures, such as changes in animal distribution or density, limitation of food resources, and alteration to critical habitats. The increased potential for emergence and resurgence of diseases that are responsive to environmental conditions also has implications for wildlife populations. Shifts in temperature or other climatic factors may directly affect the incidence of disease in wildlife by altering host-pathogen interactions, promoting vector populations or allowing new ranges for vectors, or reducing development times for parasites. A number of examples from both field and laboratory studies have demonstrated a clear link between warming environments and disease spread. Many climate-related environmental changes also influence wildlife health indirectly. For example, increasing temperatures, in combination with shifts in rainfall and humidity, may aggravate current trends for water resource limitation and habitat degradation or destruction and lead to increased crowding of animal populations, thereby promoting transmission opportunities of pathogens within populations or across species. Although it may be difficult to disentangle the influences of other anthropogenic changes from the direct effects of warming, some ecosystems provide especially useful models for studying climate-related disease spread in wildlife. For example, the effects of climate change on parasite dynamics may be easily observed in the Arctic, where environmental changes are occurring rapidly, anthropogenic influences are relatively limited, and biodiversity is generally low. Marine ecosystems are also undergoing rapid rates of change and may be vulnerable to a variety of natural and anthropogenic perturbations. Although many factors affect the health of organisms in ocean environments, temperature has been clearly linked to an increase in disease prevalence among sessile organisms such as corals. In this chapter, we discuss observed and predicted changes to wildlife health resulting from climate change. Our review will not include all aspects of wildlife health, but will instead focus on established or suspected links between climate drivers and disease spread and discuss examples from the current literature. Here, we define disease spread to include: 1) change in geographical or altitudinal distribution of pathogens, parasites, and vectors and the diseases they cause; 2) change in prevalence or severity of disease; and 3) emergence of novel diseases. Additionally, because wildlife species serve as reservoirs for zoonotic diseases that affect both animals and humans, we include select examples of the effect of climate change on the capacity of wildlife to harbor and spread these disease agents.

Book chapter↗
USGS2006

Bedrock Geologic Map of New Hampshire, a Digital Representation of Lyons and Others 1997 Map and Ancillary Files

The New Hampshire Geological Survey collects data and performs research on the land, mineral, and water resources of the State, and disseminates the findings of such research to the public through maps, reports, and other publications. The Bedrock Geologic Map of New Hampshire, by John B. Lyons, Wallace A. Bothner, Robert H. Moench, and James B. Thompson, was published in paper format by the U.S. Geological Survey (USGS) in 1997. The online version of this CD contains digital datasets of the State map that are intended to assist the professional geologist, land-use planners, water resource professionals, and engineers and to inform the interested layperson. In addition to the bedrock geology, the datasets include geopolitical and hydrologic information, such as political boundaries, quadrangle boundaries, hydrologic units, and water-well data. A more thorough explanation for each of these datasets may be found in the accompanying metadata files. The data are spatially referenced and may be used in a geographic information system (GIS). ArcExplorer, the Environmental Systems Research Institute's (ESRI) free GIS data viewer, is available at http://www.esri.com/software/arcexplorer. ArcExplorer provides basic functions that are needed to harness the power and versatility of the spatial datasets. Additional information on the viewer and other ESRI products may be found on the ArcExplorer website. Although extensive review and revisions of the data have been performed by the USGS and the New Hampshire Geological Survey, these data represent interpretations made by professional geologists using the best available data, and are intended to provide general geologic information. Use of these data at scales larger than 1:250,000 will not provide greater accuracy. The data are not intended to replace site-specific or specific-use investigations. The U.S. Geological Survey, New Hampshire Geological Survey, and State of New Hampshire make no representation or warranty, expressed or implied, regarding the use, accuracy, or completeness of the data presented herein, or from a map printed from these data; nor shall the act of distribution constitute any such warranty. The New Hampshire Geological Survey disclaims any legal responsibility or liability for interpretations made from the map, or decisions based thereon. For more information on New Hampshire Geological Survey programs please visit the State's website at http://des.nh.gov/Geology/. New Hampshire Geographically Referenced Analysis and Information Transfer System (NH GRANIT) provides access to statewide GIS (http://www.granit.unh.edu/). Questions about this CD or about other datasets should be directed to the New Hampshire Department of Environmental Services.

Data Series↗
USGS2013

Fire regimes of quaking aspen in the Mountain West

Quaking aspen (Populus tremuloides Michx.) is the most widespread tree species in North America, and it is found throughout much of the Mountain West (MW) across a broad range of bioclimatic regions. Aspen typically regenerates asexually and prolifically after fire, and due to its seral status in many western conifer forests, aspen is often considered dependent upon disturbance for persistence. In many landscapes, historical evidence for post-fire aspen establishment is clear, and following extended fire-free periods senescing or declining aspen overstories sometimes lack adequate regeneration and are succeeding to conifers. However, aspen also forms relatively stable stands that contain little or no evidence of historical fire. In fact, aspen woodlands range from highly fire-dependent, seral communities to relatively stable, self-replacing, non-seral communities that do not require fire for persistence. Given the broad geographic distribution of aspen, fire regimes in these forests likely co-vary spatially with changing community composition, landscape setting, and climate, and temporally with land use and climate – but relatively few studies have explicitly focused on these important spatiotemporal variations. Here we reviewed the literature to summarize aspen fire regimes in the western US and highlight knowledge gaps. We found that only about one-fourth of the 46 research papers assessed for this review could be considered fire history studies (in which mean fire intervals were calculated), and all but one of these were based primarily on data from fire-scarred conifers. Nearly half of the studies reported at least some evidence of persistent aspen in the absence of fire. We also found that large portions of the MW have had little or no aspen fire history research. As a result of this review, we put forth a classification framework for aspen that is defined by key fire regime parameters (fire severity and probability), and that reflects underlying biophysical settings and correlated aspen functional types. We propose the following aspen fire regime types: (1) fire-independent, stable aspen; (2) fire-influenced, stable aspen; (3) fire-dependent, seral, conifer-aspen mix; (4) fire-dependent, seral, montane aspen-conifer; and (5) fire-dependent, seral, subalpine aspen-conifer. Closing research gaps and validating our proposed aspen fire regime classification will likely require additional site-specific research, enhanced dendrochronology techniques, charcoal and pollen record analysis, spatially-explicit modeling, and other techniques. We hope to encourage development of site-appropriate disturbance ecology characterizations, in order to aid efforts to manage and restore aspen communities and to diagnose key factors contributing to changes in aspen.

Forest Ecology and Management↗
USGS2013

Conservation status of freshwater gastropods of Canada and the United States

This is the first American Fisheries Society conservation assessment of freshwater gastropods (snails) from Canada and the United States by the Gastropod Subcommittee (Endangered Species Committee). This review covers 703 species representing 16 families and 93 genera, of which 67 species are considered extinct, or possibly extinct, 278 are endangered, 102 are threatened, 73 are vulnerable, 157 are currently stable, and 26 species have uncertain taxonomic status. Of the entire fauna, 74% of gastropods are imperiled (vulnerable, threatened, endangered) or extinct, which exceeds imperilment levels in fishes (39%) and crayfishes (48%) but is similar to that of mussels (72%). Comparison of modern to background extinction rates reveals that gastropods have the highest modern extinction rate yet observed, 9,539 times greater than background rates. Gastropods are highly susceptible to habitat loss and degradation, particularly narrow endemics restricted to a single spring or short stream reaches. Compilation of this review was hampered by a paucity of current distributional information and taxonomic uncertainties. Although research on several fronts including basic biology, physiology, conservation strategies, life history, and ecology are needed, systematics and curation of museum collections and databases coupled with comprehensive status surveys (geographic limits, threat identification) are priorities.

Fisheries↗
USGS2014

Ecological role and services of tropical mangrove ecosystems: a reassessment

Aim To reassess the capacity of mangroves for ecosystem services in the light of recent data. Location Global mangrove ecosystems. Methods We review four long-standing roles of mangroves: (1) carbon dynamics – export or sink; (2) nursery role; (3) shoreline protection; (4) land-building capacity. The origins of pertinent hypotheses, current understanding and gaps in our knowledge are highlighted with reference to biogeographic, geographic and socio-economic influences. Results The role of mangroves as C sinks needs to be evaluated for a wide range of biogeographic regions and forest conditions. Mangrove C assimilation may be under-estimated because of flawed methodology and scanty data on key components of C dynamics. Peri-urban mangroves may be manipulated to provide local offsets for C emission. The nursery function of mangroves is not ubiquitous but varies with spatio-temporal accessibility. Connectivity and complementarity of mangroves and adjacent habitats enhance their nursery function through trophic relay and ontogenetic migrations. The effectiveness of mangroves for coastal protection depends on factors at landscape/geomorphic to community scales and local/species scales. Shifts in species due to climate change, forest degradation and loss of habitat connectivity may reduce the protective capacity of mangroves. Early views of mangroves as land builders (especially lateral expansion) were questionable. Evidence now indicates that mangroves, once established, directly influence vertical land development by enhancing sedimentation and/or by direct organic contributions to soil volume (peat formation) in some settings. Main conclusions Knowledge of thresholds, spatio-temporal scaling and variability due to geographic, biogeographic and socio-economic settings will improve the management of mangrove ecosystem services. Many drivers respond to global trends in climate change and local changes such as urbanization. While mangroves have traditionally been managed for subsistence, future governance models must involve partnerships between local custodians of mangroves and offsite beneficiaries of the services.

Global Ecology and Biogeography↗
USGS2011

Factors influencing riverine fish assemblages in Massachusetts

The U.S. Geological Survey, in cooperation with the Massachusetts Department of Conservation and Recreation, Massachusetts Department of Environmental Protection, and the Massachusetts Department of Fish and Game, conducted an investigation of fish assemblages in small- to medium-sized Massachusetts streams. The objective of this study was to determine relations between fish-assemblage characteristics and anthropogenic factors, including impervious cover and estimated flow alteration, relative to the effects of environmental factors, including physical-basin characteristics and land use. The results of this investigation supersede those of a preliminary analysis published in 2010. Fish data were obtained for 669 fish-sampling sites from the Massachusetts Division of Fisheries and Wildlife fish-community database. A review of the literature was used to select fish metrics - species richness, abundance of individual species, and abundances of species grouped on life history traits - responsive to flow alteration. The contributing areas to the fish-sampling sites were delineated and used with a geographic information system to determine a set of environmental and anthropogenic factors that were tested for use as explanatory variables in regression models. Reported and estimated withdrawals and return flows were used together with simulated unaltered streamflows to estimate altered streamflows and indicators of flow alteration for each fish-sampling site. Altered streamflows and indicators of flow alteration were calculated on the basis of methods developed in a previous U.S. Geological Survey study in which unaltered daily streamflows were simulated for a 44-year period (water years 1961-2004), and streamflow alterations were estimated by use of water-withdrawal and wastewater-return data previously reported to the State for the 2000-04 period and estimated domestic-well withdrawals and septic-system discharges. A variable selection process, conducted using principal components analysis and Spearman rank correlation, was used to select a set of 15 non-redundant environmental and anthropogenic factors to test for use as explanatory variables in the regression analyses. Twenty-one fish species were used in a multivariate analysis of fish-assemblage patterns. Results of nonmetric multidimensional scaling and hierarchical cluster analysis were used to group fish species into fluvial and macrohabitat generalist habitat-use classes. Two analytical techniques, quantile regression and generalized linear modeling, were applied to characterize the association between fish-response variables and environmental and anthropogenic explanatory variables. Quantile regression demonstrated that as percent impervious cover and an indicator of percent alteration of August median flow from groundwater withdrawals increase, the relative abundance and species richness of fluvial fish decrease. The quantile regression plots indicate that (1) as many as seven fluvial fish species are expected in streams with little flow alteration or impervious cover, (2) no more than four fluvial fish species are expected in streams where flow alterations from groundwater withdrawals exceed 50 percent of the August median flow or the percent area of impervious cover exceeds 15 percent, and (3) few fluvial fish remain at high rates of withdrawal (approaching 100 percent) or high rates of impervious cover (between 25 and 30 percent). Three generalized linear models (GLMs) were developed to quantify the response of fluvial fish to multiple environmental and anthropogenic variables. All variables in the GLM equations were demonstrated to be significant (p less than 0.05, with most less than 0.01). Variables in the fluvial-fish relative-abundance model were channel slope, estimated percent alteration of August median flow from groundwater withdrawals, percent wetland in a 240-meter buffer strip, and percent impervious cover. Variables in the fluvial-fish species-richness model were drainage area, channel slope, total undammed reach length, percent wetland in a 240-meter buffer strip, and percent impervious cover. Variables in the brook trout relativeabundance model were drainage area, percent open water, and percent impervious cover. The variability explained by the GLM models, as measured by the pseudo R2, ranged from 18.2 to 34.6, and correlations between observed and predicted values ranged from 0.50 to 0.60. Results of GLM models indicated that, keeping all other variables the same, a one-unit (1 percent) increase in the percent depletion of August median flow would result in a 0.9-percent decrease in the relative abundance (in counts per hour) of fluvial fish. The results of GLM models also indicated that a unit increase in impervious cover (1 percent) resulted in a 3.7-percent decrease in the relative abundance of fluvial fish, a 5.4-percent decrease in fluvial-fish species richness, and an 8.7-percent decrease in brook trout relative abundance.

Massachusetts↗