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A three-dimensional mapping of the ocean based on environmental data

The existence, sources, distribution, circulation, and physicochemical nature of macroscale oceanic water bodies have long been a focus of oceanographic inquiry. Building on that work, this paper describes an objectively derived and globally comprehensive set of 37 distinct volumetric region units, called ecological marine units (EMUs). They are constructed on a regularly spaced ocean point-mesh grid, from sea surface to seafloor, and attributed with data from the 2013 World Ocean Atlas version 2. The point attribute data are the means of the decadal averages from a 57-year climatology of six physical and chemical environment parameters (temperature, salinity, dissolved oxygen, nitrate, phosphate, and silicate). The database includes over 52 million points that depict the global ocean in x, y, and z dimensions. The point data were statistically clustered to define the 37 EMUs, which represent physically and chemically distinct water volumes based on spatial variation in the six marine environmental characteristics used. The aspatial clustering to produce the 37 EMUs did not include point location or depth as a determinant, yet strong geographic and vertical separation was observed. Twenty-two of the 37 EMUs are globally or regionally extensive, and account for 99% of the ocean volume, while the remaining 15 are smaller and shallower, and occur around coastal features. We assessed the vertical distribution of EMUs in the water column and placed them into classical depth zones representing epipelagic (0 m to 200 m), mesopelagic (200 m to 1,000 m), bathypelagic (1,000 m to 4,000 m) and abyssopelagic (>4,000 m) layers. The mapping and characterization of the EMUs represent a new spatial framework for organizing and understanding the physical, chemical, and ultimately biological properties and processes of oceanic water bodies. The EMUs are an initial objective partitioning of the ocean using long-term historical average data, and could be extended in the future by adding new classification variables and by introducing functionality to develop time-specific EMU distribution maps. The EMUs are an open-access resource, and as both a standardized geographic framework and a baseline physicochemical characterization of the oceanic environment, they are intended to be useful for disturbance assessments, ecosystem accounting exercises, conservation priority setting, and marine protected area network design, along with other research and management applications.

Oceanography↗

Climate-driven changes in wetland hydroperiods predict losses in habitat suitability for amphibian breeding

Environmental regimes are shifting with accelerating climate change, disrupting interactions between species and ecosystems shaped by the climate of the pre-industrial era. Species assemblages that depend on a dynamic network of ephemeral and permanent habitats may be especially sensitive to changing climate, whereby shifting environmental regimes may limit species persistence in landscapes in ways not captured by species physiology or coarse habitat metrics alone. Here we forecasted the loss of montane and subalpine wetlands as breeding habitat for three amphibian species in the US Pacific Northwest, Ambystoma gracile , Ambystoma macrodactylum , and Rana cascadae . We combined historical and recent surveys to build occupancy models of current breeding habitat use. We combined these results with existing hydrological models to predict the loss of suitable breeding habitats by the 2080s due to increased wetland drying. We found that species-specific occupancy of wetlands used for reproduction was predicted by both abiotic (e.g., elevation, wetland area) and biotic (e.g., emergent vegetation) site-level characteristics. Among wetlands currently used for reproduction, we estimated that between 12% and 23% could become unsuitable for the aquatic phase of each species by the 2080s, with watershed-scale losses ranging from 0% to 80%. This suggests that wetland habitat loss could limit the persistence of these species in the Pacific Northwest, though impacts are expected to vary across landscapes. More broadly, we demonstrate a novel approach to quantifying species climate change vulnerability that can be used to identify areas of both risk and resilience in changing landscapes and help to prioritize the application of practical conservation solutions in areas of greatest need.

Washington↗

A comprehensive inventory of communication tower infrastructure across the range of greater and Gunnison sage-grouse

We compiled and verified a comprehensive inventory dataset of communication tower infrastructure across the range of the greater sage-grouse ( Centrocercus urophasianus ) and Gunnison sage-grouse ( Centrocercus minimus ), two species of conservation concern that are viewed as ecosystem health indicators for the entire sagebrush biome within the United States. Our dataset includes all known towers with emphasis on validating construction year and month for towers built between 1990–2023. The annual spatial time series format of the data allows users to visualize, assess, and download tower locations and duration (including dates of construction and dismantlement) across the sagebrush biome of the western U.S. Tower data were acquired from publicly available infrastructure databases and records were filtered to include communication tower structures within the area of interest. Data records were validated and checked for accuracy with high resolution aerial and satellite imagery, and a subset were verified during field visits. The final filtered dataset comprises 4,322 tower sites, of which 3,528 tower site locations were verified via satellite imagery or field visits, and 794 were unverified tower sites (tower presence could not be confirmed via satellite imagery). Each tower record includes geographic coordinates, structure height, estimated date of construction, number of towers at each site, and, if applicable, date of dismantlement. The data product closes spatiotemporal gaps and resolves discrepancies present in other public versions of similar data and can be used in ecological research, infrastructure planning/siting/permitting, decision support tools for biological or landscape management, environmental assessments, or general use pertaining to the historic and current locations of communication infrastructure across sagebrush ecosystems.

western united States↗

Sediment deposition and occurrence of selected nutrients, other chemical constituents, and diatoms in bottom sediment, Perry Lake, northeast Kansas, 1969–2001

A combination of bathymetric surveying and bottom-sediment coring was used to investigate sediment deposition and the occurrence of selected nutrients (total nitrogen and total phosphorus), organic and total carbon, 26 metals and trace elements, 15 organochlorine compounds, 1 radionuclide, and diatoms in bottom sediment of Perry Lake, northeast Kansas. The total estimated volume and mass of bottom sediment deposited from 1969 through 2001 in the original conservation-pool area of the lake was 2,470 million cubic feet (56,700 acre-feet) and 97,200 million pounds (44,100 million kilograms), respectively. The estimated sediment volume occupied about 23 percent of the original conservation-pool, water-storage capacity of the lake. Mean annual net sediment deposition since 1969 was estimated to be 3,040 million pounds (1,379 million kilograms). Mean annual sediment yield from the Perry Lake Basin was estimated to be 2,740,000 pounds per square mile (4,798 kilograms per hectare). The estimated mean annual net loads of total nitrogen and total phosphorus deposited in the bottom sediment of Perry Lake were 7,610,000 pounds per year (3,450,000 kilograms per year) and 3,350,000 pounds per year (1,520,000 kilograms per year), respectively. The estimated mean annual yields of total nitrogen and total phosphorus from the Perry Lake Basin were 6,850 pounds per square mile per year (12.0 kilograms per hectare per year) and 3,020 pounds per square mile per year (5.29 kilograms per hectare per year), respectively. A statistically significant positive trend for total nitrogen deposition in the bottom sediment of Perry Lake was indicated. However, the trend may be due solely to analytical variance. No statistically significant trend for total phosphorus deposition was indicated. Overall, the transport and deposition of these constituents have been relatively uniform throughout the history of Perry Lake. On the basis of nonenforceable sediment-quality guidelines established by the U.S. Environmental Protection Agency, concentrations of arsenic, chromium, copper, and nickel in the bottom sediment of Perry Lake typically exceeded the threshold-effects levels, which represent the concentrations above which toxic biological effects occasionally occur. Most nickel concentrations also exceeded the probable-effects level, which represents the concentration above which toxic biological effects usually or frequently occur. Sediment concentrations of metals and trace elements were relatively uniform over time. Statistically significant positive depositional trends for arsenic and manganese and statistically significant negative depositional trends for beryllium, chromium, titanium, and vanadium were indicated. However, the trends may be due solely to analytical variance. Organochlorine compounds either were not detected or were detected at concentrations less than the threshold-effects levels. Evidence of a negative depositional trend for DDE (degradation product of DDT) was consistent with the history of DDT use. Other organochlorine compounds detected were DDD and dieldrin. Diatom occurrence in the bottom sediment of Perry Lake was dominated by species that are indicators of eutrophic (nutrient-rich) conditions. Thus, it was concluded that eutrophic conditions have existed during much of the history of Perry Lake. However, an increase in the relative percentage abundance of the oligotrophic (nutrient-poor) species, combined with the significant positive depositional trends for two oligotrophic species ( Aulacoseira islandica and Cyclotella radiosa ) and the significant negative depositional trend for one eutrophic species ( Stephanodiscus niagarae ), indicated that conditions in Perry Lake may have become less eutrophic in recent years. Notable changes in human activity within the basin included a substantial decrease in alfalfa production and a substantial increase in soybean production from 1965 to 2000. These and other changes in human activity may have had some effect on the deposition of chemical constituents and diatoms in the bottom sediment of Perry Lake. It is uncertain whether changes in human activity may account, in part, for the possibility of Perry Lake becoming less eutrophic over time as indicated by trends in the deposition of several diatom species in the lake-bed sediment.

Kansas↗

Genetic erosion in an endangered desert fish during a multidecadal megadrought despite long-term supportive breeding

Human water use combined with a recent megadrought have reduced river and stream flow through the Southwestern United States and led to periodic drying of formerly perennial river segments. Reductions in snowmelt runoff and increased extent of drying collectively threaten short-lived, obligate aquatic species, including the endangered Rio Grande silvery minnow. This species experiences ‘boom-and-bust’ population dynamics where large fluctuations in abundance are expected to lower estimates of effective population size and erode genetic diversity over time. Rates of diversity loss are also affected by additions of hatchery-origin fish used to supplement the wild population. We leveraged demographic and genetic data from wild and hatchery individuals to understand the relationship of genetic diversity and effective population size to abundance over the last two decades. Genetic diversity was low during the early 2000s, but diversity and demographic metrics stabilized after the hatchery program was initiated and environmental conditions improved. Yet, from 2017 onward, allelic diversity declined (Cohen's d = 1.34) and remains low despite hatchery stocking and brief wild population recovery. Across the time series, single-sample estimates of effective population size (N eD ) were positively associated ( r = 0.53) with wild/total abundance, but as the proportion of hatchery-origin spawners increased, N eD was reduced ( r = -0.55). Megadrought limits wild spawner abundance and precludes refreshment of hatchery brood stocks with wild fish, hence we predict a riverine population increasingly dominated by hatchery-origin individuals and accelerated loss of genetic diversity despite supplementation. We recommend an adaptive and accelerated management plan that integrates river flow management and hatchery operations to slow the pace of genetic diversity loss exacerbated by megadrought.

New Mexico↗

Bacterial genomics reveal the complex epidemiology of an emerging pathogen in arctic and boreal ungulates

Northern ecosystems are currently experiencing unprecedented ecological change, largely driven by a rapidly changing climate. Pathogen range expansion, and emergence and altered patterns of infectious disease, are increasingly reported in wildlife at high latitudes. Understanding the causes and consequences of shifting pathogen diversity and host-pathogen interactions in these ecosystems is important for wildlife conservation, and for indigenous populations that depend on wildlife. Among the key questions are whether disease events are associated with endemic or recently introduced pathogens, and whether emerging strains are spreading throughout the region. In this study, we used a phylogenomic approach to address these questions of pathogen endemicity and spread for Erysipelothrix rhusiopathiae , an opportunistic multi-host bacterial pathogen associated with recent mortalities in arctic and boreal ungulate populations in North America. We isolated E. rhusiopathiae from carcasses associated with large-scale die-offs of muskoxen in the Canadian Arctic Archipelago, and from contemporaneous mortality events and/or population declines among muskoxen in northwestern Alaska and caribou and moose in western Canada. Bacterial genomic diversity differed markedly among these locations; minimal divergence was present among isolates from muskoxen in the Canadian Arctic, while in caribou and moose populations, strains from highly divergent clades were isolated from the same location, or even from within a single carcass. These results indicate that mortalities among northern ungulates are not associated with a single emerging strain of E. rhusiopathiae , and that alternate hypotheses need to be explored. Our study illustrates the value and limitations of bacterial genomic data for discriminating between ecological hypotheses of disease emergence, and highlights the importance of studying emerging pathogens within the broader context of environmental and host factors.

Frontiers in Microbiology↗

Facilitating the inclusion of nonmarket values in Bureau of Land Management planning and project assessments—Final report

Executive Summary This report summarizes the results of a series of field-based case studies conducted by the U.S. Geological Survey (USGS) to (1) evaluate the use of nonmarket values in Bureau of Land Management (BLM) planning and project assessments, (2) update existing technical resources for measuring those values, and (3) provide guidance to field staff on the use of nonmarket values. Four BLM pilot sites participated in this effort: Canyons of the Ancients National Monument in Colorado, Red Cliffs and Beaver Dam Wash National Conservation Areas in Utah, BLM’s Taos Field Office in New Mexico, and BLM's Tuscarora Field Office in Nevada. The focus of the case studies was on practical applications of nonmarket valuation. USGS worked directly with BLM field staff at the pilot sites to demonstrate the process of considering nonmarket values in BLM decisionmaking and document the questions, challenges, and opportunities that arise when tying economic language to projects. As part of this effort, a Web-based toolkit, available at https://my.usgs.gov/benefit-transfer/ , was updated and expanded to help facilitate benefit transfers (that is, the use of existing economic data to quantify nonmarket values) and qualitative discussions of nonmarket values. A total of 53 new or overlooked nonmarket valuation studies comprising 494 nonmarket value estimates for various recreational activities and the preservation of threatened, endangered, and rare species were added to existing databases within this Benefit Transfer Toolkit. In addition, four meta-regression functions focused on hunting, wildlife viewing, fishing, and trail use recreation were developed and added to the Benefit Transfer Toolkit. Results of this effort demonstrate that there are two main roles for nonmarket valuation in BLM planning. The first is to improve the decisionmaking process by contributing to a more comprehensive comparison of economic benefits and cost when evaluating resource tradeoffs for National Environmental Policy Act analyses. The second is to use economic language and information on economic values, either qualitative or quantitative, to improve the ability to communicate the economic significance of the resources provided by BLM-managed lands. Findings also indicate that the use of existing economic data to quantify nonmarket values (that is, benefit transfer) poses unique challenges because of the scarcity of both resource data and existing valuation studies focused on resources and sites managed by BLM. This highlights the need for improvements in the collection of resource data at BLM sites, especially visitor use data, as well as an opportunity for BLM’s Socioeconomics Program to strategically identify priority areas, in terms of both resources and geographic locations, where primary valuation studies could be conducted and the results used for future benefit transfers. Finally, whereas qualitative discussions of nonmarket values do not facilitate the comparison of monetized values, they can provide a manageable next step forward in providing more comprehensive information on nonmarket values for BLM plans and project assessments.

Open-File Report↗

Mercury deposition in snow near an industrial emission source in the western U.S. and comparison to ISC3 model predictions

Mercury (total and methyl) was evaluated in snow samples collected near a major mercury emission source on the Idaho National Engineering and Environmental Laboratory (INEEL) insoutheastern Idaho and 160 km downwind in Teton Range in westernWyoming. The sampling was done to assess near-field (<12 km)deposition rates around the source, compare them to those measured in a relatively remote, pristine downwind location, andto use the measurements to develop improved, site-specific modelinput parameters for precipitation scavenging coefficient and thefraction of Hg emissions deposited locally. Measured snow waterconcentrations (ng L -1 ) were converted to deposition (ugm -2 ) using the sample location snow water equivalent. Thedeposition was then compared to that predicted using the ISC3 airdispersion/deposition model which was run with a range ofparticle and vapor scavenging coefficient input values. Acceptedmodel statistical performance measures (fractional bias andnormalized mean square error) were calculated for the differentmodeling runs, and the best model performance was selected. Measured concentrations close to the source (average = 5.3 ngL -1 ) were about twice those measured in the Teton Range(average = 2.7 ng L -1 ) which were within the expected rangeof values for remote background areas. For most of the samplinglocations, the ISC3 model predicted within a factor of two of theobserved deposition. The best modeling performance was obtainedusing a scavenging coefficient value for 0.25 μm diameterparticulate and the assumption that all of the mercury isreactive Hg(II) and subject to local deposition. A 0.1 μm particle assumption provided conservative overprediction of thedata, while a vapor assumption resulted in highly variable predictions. Partitioning a fraction of the Hg emissions to elemental Hg(0) (a U.S. EPA default assumption for combustion facility risk assessments) would have underpredicted the observed fallout.

Idaho↗

Nocturnal basking in freshwater turtles: A global assessment

Diurnal basking (“sunning”) is common in many ectotherms and is generally thought to be a behavioural mechanism for thermoregulation. Recent studies have reported the occurrence of nocturnal basking in a few distantly-related species of freshwater turtles, but the true extent of this behaviour is unknown, and it may be underreported due to sampling biases (e.g., not surveying for turtles at night). Therefore, we initiated a global, collaborative effort to systematically document and quantify basking activity (diurnal and nocturnal) across a wide range of freshwater turtle species and locations. We conducted camera trap or manual surveys in North America, the Caribbean, Europe, Asia, Africa, the Seychelles, and Australia. We collected 873,111 trail camera photographs (25,273 hrs of search effort) and obtained data on 29 freshwater turtle species from seven families. Nocturnal basking was documented in 13 species, representing six families (Chelidae, Emydidae , Geoemydidae, Kinosternidae, Pelomedusidae, and Trionychidae), including representatives in Central America, Trinidad and Tobago, Africa, the Seychelles, Asia, and Australia. Nocturnal basking was restricted to tropical and sub-tropical locations, suggesting that environmental temperature plays a role in this behaviour. However, the primary factors driving nocturnal basking are yet to be determined and may vary geographically and by species. The frequency and duration of nocturnal basking varied among species and seasons, but nocturnal basking events were often substantially longer than diurnal events. This is the first study to document a widespread occurrence of nocturnal basking, and our results suggest that nocturnal basking may be a common, although overlooked, aspect of many species’ ecology.

Global Ecology and Conservation↗

Assessment of managed aquifer recharge at Sand Hollow Reservoir, Washington County, Utah, updated to conditions through 2018

Sand Hollow Reservoir in Washington County, Utah, was completed in March 2002 and is operated primarily for managed aquifer recharge by the Washington County Water Conservancy District. Sand Hollow Reservoir has remained nearly full since 2006 because of surface-water diversions of about 288,000 acre-feet (acre-ft) from 2002 through 2018. Groundwater levels in monitoring wells near the reservoir rose through 2006 and have fluctuated since then because of variations in reservoir stage and nearby pumping from production wells. Between 2004 and 2018, about 46,000 acre-ft of groundwater was withdrawn by these wells for municipal supply. In addition, about 45,000 acre-ft of shallow seepage was captured by French drains adjacent to the North and West Dams and used for municipal supply, irrigation, or returned to the reservoir. From 2002 through 2018, about 159,000 acre-ft of water seeped beneath the reservoir to recharge the underlying Navajo Sandstone aquifer, which includes about 18,500 acre-ft of recharge in the 2017–18 period since the last report. Water quality continued to be monitored at various wells in Sand Hollow during 2017–18 to evaluate the timing and location of reservoir recharge as it moved through the aquifer. Changing geochemical conditions at monitoring well water district (WD) 12 indicated rising groundwater levels and mobilization of vadose-zone salts, which could be a precursor to the arrival of reservoir recharge. Changes to geochemical conditions and environmental tracers at monitoring well WD 22 indicated the arrival of reservoir recharge.

Utah↗

Assessment of an in-channel redistribution technique for large woody debris management in Locust Creek, Linn County, Missouri

The U.S. Geological Survey, in cooperation with the Missouri Department of Conservation and Missouri Department of Natural Resources, completed a study to assess a mechanical redistribution technique used for the management of large woody debris (LWD) jams in Locust Creek within Pershing State Park and Fountain Grove Conservation Area, Linn County, Missouri. Extensive LWD jams were treated from 1996 to 2009 using a low-impact technique in which LWD from the jams was redistributed to reopen the channel and to mimic the natural geomorphic process of channel migration and adjustment to an obstruction. The scope of the study included the comparison of selected channel geometry characteristics and bed material particle-size distribution in seven LWD treatment reaches with that of adjacent untreated reaches (unaffected by LWD accumulations) of Locust Creek. A comparison of 1996 and 2015 survey cross sections in treated and untreated reaches and photograph documentation were used to assess channel geomorphic change and the stability of redistributed LWD. The physical characteristics of LWD within jams present in the study reach during 2015–16 also were documented. Based on the general lack of differences in channel metrics between treated and untreated reaches, it can be concluded that the mechanical redistribution technique has been an effective treatment of extensive LWD jams in Locust Creek. Channel alterations, including aggradation, streamflow piracy, and diversions, have resulted in temporal and spatial changes in the Locust Creek channel that may affect future applications of the redistribution technique in Pershing State Park. The redistribution technique was used to effectively manage LWD in Locust Creek at a potentially lower financial cost and reduced environmental disturbance than the complete removal of LWD. A comparison of four channel metrics (bankfull cross-sectional area, channel width, streamflow capacity, and width-depth ratio) for individual treatment reaches with adjacent untreated reaches indicated no statistically significant difference in most comparisons. Where statistically significant differences in channel metrics were determined between individual reaches, the channel metrics in treatment reaches were significantly less than adjacent untreated reaches in some comparisons, and significantly greater than adjacent untreated reaches in others. Without immediate posttreatment cross sections in treated and untreated reaches for comparison, it is impossible to say with certainty that a lack of significant differences in channel metrics is a result of posttreatment channel adjustment or, conversely, that any significant differences that remain are a result of the treatment of LWD. Characteristics of LWD in accumulations sampled within the study area in 2015 indicate that most sampled pieces were in the 1–2 foot diameter size class, the 5–16 foot length class, and the advanced decay class. Most of documented LWD pieces were loose and not buried, about 20 percent on average had a root wad attached, and about 6.5 percent on average were sawn logs. Most of sampled material was less than one-half of the bankfull channel width, indicating it was easily transportable, and the advanced decay class of material entering the study area indicated that it was likely sourced from outside of Pershing State Park. Redistributed LWD associated with treatment seems to be intact in the 1996 treated reaches from direct observation and from inference because there was net channel aggradation between 1996 and 2015 in comparison surveys. The change in channel area resulting from aggradation in time (1996 to 2015) in treated and untreated reaches exceeded the differences in channel characteristics between the treated and untreated channels in 2015 surveys.

Missouri↗

Invasive Brook Stickleback Culaea inconstans minimally alters the trophic ecology of four native fishes in Wyoming, USA

Invasive species introductions are a primary threat facing populations of native freshwater fishes. There are multiple mechanisms by which an invader can affect native species, with competition for food resources being one mechanism that can lead to declines in the distribution and abundance of native species. Invaders that are trophic generalists may cause shifts in the trophic ecology of native species and may be better suited for long-term persistence amid environmental stochasticity. Therefore, trophic studies can provide valuable information on the risk an invader poses to native species. Brook Stickleback Culaea inconstans is an invasive fish species in Wyoming whose effect on native fish assemblages is poorly understood. Our goal was to understand the potential for competitive interactions between Brook Stickleback and native fishes. We used stable isotopes of carbon (ẟ 13 C) and nitrogen (ẟ 15 N) to evaluate the feeding ecology of Brook Stickleback relative to four native fishes, and to explore whether native fish isotopic niches changed in sympatry with Brook Stickleback. We hypothesized that the isotopic niche of Brook Stickleback would be larger than that of native fishes, suggesting broader resource use. Additionally, we hypothesized that the isotopic niche of native fish populations sympatric with Brook Stickleback would contract. We did not find support for our hypotheses as the isotopic niche of Brook Stickleback was not substantially different from that of native fishes. Further, the isotopic niche of native fishes was not substantially affected by Brook Stickleback presence. As a result, we do not currently see evidence of Brook Stickleback altering the trophic ecology of native fish species. Our results provide insight to the effects of a small-bodied invasive fish species on native fishes in a previously unstudied region, and can help managers prioritize management actions to conserve native fishes.

Wyoming↗

Aridity drives spatiotemporal patterns of masting across the latitudinal range of a dryland conifer

Masting, or the synchronous and irregular production of seed crops, is controlled by environmental conditions and resource budgets. Increasing temperatures and shifting precipitation regimes may alter the frequency and magnitude of masting, especially in species that experience chronic resource stress. Yet the effects of a changing climate on seed production are unlikely to be uniform across populations, particularly those that span broad abiotic gradients. In this study, we assessed the spatiotemporal patterns of masting across the latitudinal distribution of a widely distributed dryland conifer species, piñon pine Pinus edulis . We quantified seed cone production from 2004 to 2017 using cone abscission scars in 187 trees from 28 sites along an 1100 km latitudinal gradient to investigate the spatiotemporal drivers of seed cone production and synchrony across populations. Populations from chronically hot and dry areas (greater climatic water deficits and less monsoonal precipitation) tended to have greater interannual variability in seed cone production and smaller crop sizes. Mast years generally followed years with low vapor pressure deficits and high precipitation during key periods of the reproductive process, but the strength of these relationships varied across the region. Populations that received greater monsoonal precipitation were less sensitive to late summer vapor pressure deficits during seed cone initiation yet more sensitive to spring vapor pressure deficits during pollination. Spatially correlated patterns of vapor pressure deficit better predicted synchrony in seed cone production than geographic distance, and these patterns were conserved at distances up to 500 km. These results demonstrate that aridity drives spatiotemporal variability in seed cone production. As a result, projected increases in aridity are likely to decrease the frequency and magnitude of masting in these dry forests and woodlands. Declines in seed production may compound climatic limitations to recruitment and impede tree regeneration, with cascading effects for numerous wildlife species.

Ecography↗

A case for using Plethodontid salamanders for monitoring biodiversity and ecosystem integrity of North American forests

Terrestrial salamanders of the family Plethodontidae have unique attributes that make them excellent indicators of biodiversity and ecosystem integrity in forested habitats. Their longevity, small territory size, site fidelity, sensitivity to natural and anthropogenic perturbations, tendency to occur in high densities, and low sampling costs mean that counts of plethodontid salamanders provide numerous advantages over counts of other North American forest organisms for indicating environmental change. Furthermore, they are tightly linked physiologically to microclimatic and successional processes that influence the distribution and abundance of numerous other hydrophilic but difficult-to-study forest-dwelling plants and animals. Ecosystem processes such as moisture cycling, food-web dynamics, and succession, with their related structural and microclimatic variability, all affect forest biodiversity and have been shown to affect salamander populations as well. We determined the variability associated with sampling for plethodontid salamanders by estimating the coefficient of variation (CV ) from available time-series data. The median coefficient of variation indicated that variation in counts of individuals among studies was much lower in plethodontids (27%) than in lepidoptera (93%), passerine birds (57%), small mammals (69%), or other amphibians (37–46%), which means plethodontid salamanders provide an important statistical advantage over other species for monitoring long-term forest health.

Conservation Biology↗

Identification of the Gulf of Mexico as an important high-use habitat for leatherback turtles from Central America

Endangered leatherback sea turtles ( Dermochelys coriacea ) are wide-ranging, long-distance migrants whose movements are often associated with environmental cues. We examined the spatial distribution and habitat use for 33 satellite-tracked leatherbacks from nesting beaches on the Caribbean coast of Costa Rica and Panama from 2004 to 2018, an important nesting population for the leatherback Northwest Atlantic Distinct Population Segment. Tracking revealed the use of two distinct regions, the Gulf of Mexico (GoM, n = 18) and the North Atlantic Ocean (NAO, n = 15). We developed density utilization maps to elucidate high-use habitats, migration pathways, and seasonal movements. GoM leatherbacks were found in three concentrated high-use habitats connected by a migration pathway, while NAO leatherbacks were primarily found in a single, large high-use habitat. Leatherbacks in both regions have the potential to interact with Atlantic pelagic longline fisheries based on seasonal overlap with high fishing effort. Our findings suggest that the GoM is an important destination for leatherbacks from the Caribbean coast of Central America with seasonal movements between high-use habitats within the GoM. While leatherbacks are utilizing high-use habitats in both the NAO and the GoM, the proportion of individuals migrating into the GoM increased over the study period. Additionally, NAO leatherbacks have increased the distance they travel in the first 90 d. Regional differences in movement and spatial distribution of high-use habitats are important considerations when developing conservation plans for the Northwest Atlantic leatherback population.

Ecosphere↗

Ecological Investigations of the Federally Endangered Shivwits Milk-Vetch (Astragalus ampullarioides)--2006 Annual Report

Astragalus ampullarioides (Welsh) Welsh, the Shivwits milk-vetch, is an herbaceous perennial legume that was listed as federally endangered in September 2001. Known populations of this edaphic endemic species are restricted to Washington County, Utah, with the majority of occurrences found on gently sloping outcrops of the Triassic Petrified Forest Member of the Chinle Formation at the edge of the Mojave Desert. At the time of listing in 2001, surveys estimated a total of 1000 individuals for the species. In April-May 2006, surveys estimated approximately 4205 individuals distributed among six populations. Of the total number of individuals estimated in spring 2006, over 75 percent were distributed among three subpopulations in Zion National Park and approximately 60 percent occurred at a single 0.3-ha site in the Park. In addition to small population sizes and limited geographic distributions, the species is threatened to varying degrees by urbanization, livestock grazing, off-road vehicle use, and invasive exotic plants. In April 2006, the U.S. Geological Survey (USGS) initiated ecological investigations of the Shivwits milk-vetch to support conservation management and recovery of the species by the National Park Service (NPS; Zion National Park), the U.S. Fish and Wildlife Service (USFWS), the Bureau of Land Management (BLM), the Shivwits Band of the Paiute Tribe, and other cooperators such as The Nature Conservancy of Utah (TNC). To date, funding for this research has been provided by the Southwest Biological Science Center of the USGS Biological Resources Discipline, the USGS-NPS Park-Oriented Biological Support Project, and the Earth Surface Dynamics Program of the USGS Geologic Discipline. Additional logistical support has been provided by the Bureau of Land Management, Grand Staircase-Escalante National Monument. General objectives of this research are (1) to develop a better understanding of species-environment relations to support habitat modelling, future surveys for additional recovery populations, and potential efforts to establish new recovery populations; and (2) to evaluate effects of invasive exotic plants on habitat conditions and measures of milk-vetch performance. Specific objectives are to: Describe the distribution and abundance of milk-vetch populations and associated invasive exotic plant species within and outside of Zion National Park (Zion NP) in relation to geologic / geomorphic setting, soil properties, and plant community composition. In a field setting in Zion NP, conduct experiments to evaluate effects of invasive exotic plants on reproductive output and seedling establishment of A. ampullarioides across a gradient of exotic species biomass. Conduct greenhouse studies and analyze soils to evaluate effects of invasive exotic plants on soil biological properties (including mycorrhizal inocculation potential) that affect cycling and plant uptake of essential mineral nutrients. Based on environmental characteristics of known population locations, use Geographic Information System (GIS) tools to prepare a predictive habitat model that can be used to guide future surveys and efforts to evaluate sites for reintroduction efforts. This report describes 2006 progress and future plans for achieving these four objectives.

Open-File Report↗

Sediment deposition and occurrence of selected nutrients and other chemical constituents in bottom sediment, Tuttle Creek Lake, Northeast Kansas, 1962–99

A combination of bathymetric surveying and bottom-sediment coring was used to investigate sediment deposition and the occurrence of selected nutrients (total ammonia plus organic nitrogen and total phosphorus), 44 metals and trace elements, 15 organochlorine compounds, and 1 radionuclide in bottom sediment of Tuttle Creek Lake, northeast Kansas. The total estimated volume and mass of bottom sediment deposited from 1962 through 1999 in the original conservation-pool area of the lake was 6,170 million cubic feet (142,000 acre-feet) and 292,400 million pounds (133,000 million kilograms), respectively. The volume of sediment occupies about 33 percent of the original conservation-pool, water-storage capacity of the lake. Mean annual net sediment deposition since 1962 was estimated to be 7,900 million pounds (3,600 million kilograms). Mean annual net sediment yield from the Tuttle Creek Lake Basin was estimated to be 821,000 pounds per square mile (1,440 kilograms per hectare). The estimated mean annual net loads of total ammonia plus organic nitrogen and total phosphorus deposited in the bottom sediment of Tuttle Creek Lake were 6,350,000 pounds per year (2,880,000 kilograms per year) and 3,330,000 pounds per year (1,510,000 kilograms per year), respectively. The estimated mean annual net yields of total ammonia plus organic nitrogen and total phosphorus from the Tuttle Creek Lake Basin were 657 pounds per square mile per year (1.15 kilograms per hectare per year) and 348 pounds per square mile per year (0.61 kilograms per hectare per year), respectively. No statistically significant trend for total phosphorus deposition in the bottom sediment of Tuttle Creek Lake was indicated (trend analysis for total ammonia plus organic nitrogen was not performed). On the basis of available sediment-quality guidelines, the concentrations of arsenic, chromium, copper, nickel, silver, and zinc in the bottom sediment of Tuttle Creek Lake frequently or typically exceeded the threshold-effects levels established by the U.S. Environmental Protection Agency. Sediment concentrations of metals and trace elements were relatively uniform over time. Organochlorine compounds either were not detected or were detected at concentrations generally less than the threshold-effects levels. Following an initial positive trend, a statistically significant negative depositional trend was indicated for DDE (degradation product of DDT), which was consistent with the history of DDT use. Other organochlorine compounds detected included aldrin, DDD, and dieldrin. Notable changes in human activity within the basin included a substantial increase in the production of grain corn and soybeans from the 1960s to the 1990s. This increase in production was accompanied by a pronounced increase in the number of irrigated acres. Also, during the same time period, there was an overall increase in hog production. These changes in human activity have not had a discernible effect on the deposition of chemical constituents in the bottom sediment of Tuttle Creek Lake.

Kansas↗

Drainage investment and wetland loss: an analysis of the national resources inventory data

The United States Soil Conservation Service (SCS) conducts a survey for the purpose of establishing an agricultural land use database. This survey is called the National Resources Inventory (NRI) database. The complex NRI land classification system, in conjunction with the quantitative information gathered by the survey, has numerous applications. The current paper uses the wetland area data gathered by the NRI in 1982 and 1987 to examine empirically the factors that generate wetland loss in the United States. The cross-section regression models listed here use the quantity of wetlands, the stock of drainage capital, the realty value of farmland and drainage costs to explain most of the cross-state variation in wetland loss rates. Wetlands preservation efforts by federal agencies assume that pecuniary economic factors play a decisive role in wetland drainage. The empirical models tested in the present paper validate this assumption.

Journal of Environmental Management↗

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