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At least 181 records · Page 10Linked to original sources

Baseflow and snowmelt sustained streamflow in the Upper Colorado River Basin, 1986-2020

The Upper Colorado River Basin (UCRB) faces substantial water availability limitations. Although most streamflow originates as snowmelt, the partitioning of snowmelt between surface runoff and groundwater recharge and subsequent groundwater discharge to streams is highly uncertain. On average, over half of the streamflow in the UCRB is estimated to originate from groundwater discharge to streams, highlighting the importance of baseflow in sustaining surface water. However, the historical patterns of baseflow and streamflow, along with their variability over space and time and their specific sources, remain unknown at the basin scale. This study addresses those gaps by characterizing the sources and transport pathways of both baseflow and streamflow in the UCRB at a seasonal timestep from 1986 to 2020, including the lagged delivery of subsurface water to streams beyond the current season, using coupled models of baseflow and streamflow. Between 1986 and 2020, on average 63% of UCRB streamflow originated from baseflow. About half of this baseflow took longer than one season to reach streams, and outside the snowmelt season, baseflow was the dominant source of streamflow. Snowmelt was a key source of both baseflow and streamflow. Current season snowmelt contributed 33% of streamflow via runoff, and 22% of the 29% of streamflow that originated as current season baseflow via subsurface flow to streams. Over the study period, baseflow index (BFI) declined in headwaters and increased at mid-elevations. Springtime increases in BFI demonstrate the increasingly important role baseflow plays in water supply. Identifying the sources, locations, and timing of water that contributed to the UCRB outlet can inform management of water resources in the basin.

Arizona, Colorado, New Mexico, Utah, Wyoming↗

U.S. Geological Survey Activities Related to American Indians and Alaska Natives Fiscal Year 2002

Information is a resource for Native American governments, communities, organizations, and people. The U.S. Geological Survey (USGS) provides technical expertise, reports, and other impartial information sources that benefit Native Americans interested in subsistence issues, water, land use, and the health of many parts of the environment. Native self-sufficiency, economic development, and conservation are cultivated through Native decisions informed with USGS data and analyses. The USGS works in cooperation with American Indian and Alaska Native governments, conducting research on water and mineral resources, animals and plants of environmental, economic, or subsistence importance, natural hazards, and geologic resources. Digital data on cartography, mineral resources, streamflow, biota, and other topics are available to American Indian and Alaska Native individuals and institutions. The USGS recognizes the need to learn from and share knowledge with Native peoples. This report describes most of the activities that the USGS conducted with American Indian and Alaska Native governments, educational institutions, and individuals during Federal Fiscal Year 2002. Some of these USGS activities were carried out in concert with the Bureau of Indian Affairs (BIA). Others were conducted by Tribes, Tribal organizations, professional societies, and the USGS. A growing number of Tribal governments, educational institutions, and other Tribal organizations have begun using geographic information systems and other digital technologies in recent years. As Tribes become more interested in and more adept at managing digital information, they are seeking relevant data from the USGS more frequently. Using digital technologies provides Tribal governments with additional means of managing lands and resources for the benefit of current and future generations. The USGS recognizes the need to make its information available to Tribal governments, and to work with those governments and other institutions to advance data management capabilities. The USGS also recognizes that Tribal institutions have varying needs, interests, and capacities. The USGS strives to be sensitive to the unique circumstances of each of these institutions while supporting their self-driven evolution. The USGS is responding to these needs by increasing the transfer of scientific information to American Indian and Alaska Native governments and by training employees of those governments to conduct scientific studies and improve scientific data management. The USGS is also encouraging American Indians and Alaska Natives to pursue careers in science and seeking ways to hire Indian and Native students. By identifying, improving, and disseminating information about available hiring mechanisms, the USGS is working to make hiring such students easier, and, therefore, more likely, for USGS managers. The U.S. Geological Survey is the Federal science bureau within the Department of the Interior (DoI). The USGS is non-regulatory and is not a significant manager of Federal or Trust lands or assets. However, as described in this report, there are several types of USGS activities that involve American Indians, Alaska Natives, and their lands. One type of activity is the course of formal studies, conducted through existing USGS programs, that involves collection of specific types of data as well as investigative and research projects. These projects typically last 2 or 3 years, although a few are parts of longer-term activities. Some projects are funded through cooperative agreements, from monies provided to the USGS by individual Tribal governments, or by the BIA. The USGS provides matching funds for cooperative projects. These formal projects may also receive funding from the U.S. Environmental Protection Agency, the Indian Health Service (part of the Department of Health and Human Services), or other Federal agencies. The USGS routinely works with its sister bureaus in the Department of the Interior to provide the scientific information and expertise needed to meet the Department's science priorities. Within this context, the USGS and the BIA are cooperating to use USGS information resources to benefit American Indian and Alaska Native peoples and their lands. The second type of USGS activity is less formal, based on initiatives designed and conducted by USGS employees. Frequently involving educational activities, these endeavors are prompted by employee interests, often as collateral issues, that result from one or more USGS employees identifying and responding to an observed need. In these activities, USGS employees help fulfill a mission of the USGS--to prove scientific relevance--while helping their fellow citizens. Increasingly, some of the educational activities are becoming parts of formal USGS projects. USGS employees have also taken the initiative in assisting American Indians and Alaska Natives through participation in several organizations that were created to foster awareness of science among Native peoples and to help build support and communication networks. One such group is the American Indian Science and Engineering Society (AISES). This group sponsors an annual national meeting in which USGS employees participate. USGS employees join this organization on a voluntary basis, bringing the benefits of this expanded network to the USGS, as many employees do with other professional organizations. Each part of the USGS has identified an American Indian/Alaska Native liaison. The USGS has a regional organizational structure, with Western, Central, and Eastern Regions. The regions work in concert with specific scientific disciplines to conduct the scientific mission of the USGS. The regional structure is intended to bring us closer to our customers; we hope that Native Americans and Alaska Natives will use the contacts listed at the end of this report.

Report↗

U.S. Geological Survey Activities Related to American Indians and Alaska Natives Fiscal Year 2003

Introduction Information is a resource for Native American governments, communities, organizations, and people. The U.S. Geological Survey (USGS) provides technical expertise, reports, and other impartial information sources that benefit Native Americans interested in subsistence issues, water, resources and land use, and the health of many parts of the environment. Native decisions based in USGS data and analyses support the goals of Native self-sufficiency, economic development, and conservation. The USGS works in cooperation with American Indian and Alaska Native governments, conducting research on: water energy and mineral resources; animals and plants of environmental, economic, or subsistence importance; and natural hazards. Digital data on cartography, energy and mineral resources, streamflow, biota, and other topics are available to American Indian and Alaska Native individuals and institutions. The USGS also recognizes the need to learn from and share knowledge with Native peoples. This report describes most of the activities that the USGS conducted with American Indian and Alaska Native governments, educational institutions, and individuals during Federal fiscal year (FY) 2003. Some of these USGS activities were conducted cooperatively with the Bureau of Indian Affairs (BIA) or other Federal entities. Others were collaborations with Tribes, Tribal organizations, and professional societies.

Report↗

National Research Program of the U.S. Geological Survey, Water Resources Division fiscal year 1994

This report provides current information about the National Research Program (NRP) of the U.S. Geological Survey's Water Resources Division (WRD) during fiscal year 1994. Organized by NRP's six research disciplines ecology, geomorphology and sediment transport, ground-water chemistry, ground-water hydrology, surface-water chemistry, and surface-water hydrology the volume contains a summary of the problem, objective, approach, and progress for each project that was active during fiscal year 1994. It also contains bibliographic information that, because of the long-term nature of the program, covers a 5-year period.

Open-File Report↗

WATSTORE: National Water Data Storage and Retrieval System of the U. S. Geological Survey; user's guide

The U.S. Geological Survey investigates the occurrence , quantity, quality, distribution, and movement of the surface and underground water resources of the Nation. The investigations, which are conducted by the Water Resources Division, of the Survey include: systematic collection, analysis, and interpretation of water data; investigation of in and agricultural water requirements; research and development to improve study techniques and methodologies to better understand the hydrologic principles that form the scientific basis of investigation; and publication and other forms of release to the public of results and data from these investigations. A large scale computerized storage and retrieval system is used by the Geological Survey to store and disseminate water data acquired through its many activities. The Geological Survey's National Water Data Storage and Retrieval System (WATSTORE) was implemented in November 1971. In addition to its data processing, storage, and retrieval capabilities, WATSTORE has the capability of providing computer-printed tables, computer-printed graphs, statistical analyses of data, and digital plots. The system is operated and maintained on the central computer facility of the Survey at its National Center, Reston, Va. an through approximately 50 terminals in Water Resources Division district an subdistrict offices located in major cities throughout the country. Asccess to WATSTORE is limited by hardware, available telephone lines, etc; for example, direct access is possible only through terminal equipment capable of interfacing with an IBM 370/155 computer. WATSTORE is now (1975) available to other Federal agencies and selected cooperators of the Geological Survey who acquire and(or) use water data. The WATSTORE User's Guide describes the systeb and how it operates.

Open-File Report↗

Water resources investigations in Tennessee: Programs and activities of the U.S. Geological Survey, 1987-1988

This report summarizes the principal programs and activities of the Water Resources Division of the U.S. Geological Survey in Tennessee during the last 12 months. It has been an exciting period of many varied activities, projects, and investigations. The variety of these activities is a reflection of the complexity of the water issues in Tennessee and points out the need for a strong ongoing water-resources research program. The USGS is in a position to meet this challenge with an outstanding staff, necessary resources, and pertinent programs in partnership with other county, state, and federal agencies that participate in the District cooperative programs. During the last year, we have witnessed a significant shift in the orientation of the projects and investigations we conduct. Ground water has emerged as one of the most important environmental issues in the Nation and the State. In Tennessee, ground water provides about 51 percent of the drinking-water supplies, and its use is increasing at a faster rate than surface-water supplies. Several communities, including Memphis and Jackson, depend entirely on ground water as their source of drinking water. There are significant concerns among the people and government officials about the quality, quantity, and occurrence of ground water in Tennessee. The USGS is meeting these concerns through assigning higher priorities and additional funds to investigations involving ground-water issues. In the years to come, this trend will continue. The mission of the USGS in Tennessee is to provide timely, accurate, and unbiased water-resources information to citizens and government officials, We intend to continue meeting the goals of this mission by maintaining excellence in our staff and programs. We feel proud of the accomplishments of the last year. I wish to share these successes with the cooperating agencies and organizations that have made these programs possible.

Tennessee↗

Remote sensing of field-scale irrigation withdrawals in the central Ogallala aquifer region

For agricultural areas facing water scarcity, sustainable water use policy relies on irrigation information that is timely and at a high resolution, but existing publicly available water use data are often insufficient for monitoring compliance or understanding the influence of policy on individual farmer decisions. This study attempts to fill this data gap by using remote sensing to map annual irrigation quantity at the field-scale within the central Ogallala aquifer region of the United States. We compiled in situ annual irrigation volume data at the field scale in the Republican River Basin of Colorado for 2015–2018 and at the Public Land Survey System (PLSS) section scale in western Kansas for 2000–2016, which served as reference data in random forest models that relied on Landsat-based actual evapotranspiration from the Operational Simplified Surface Energy Balance model (SSEBop) along with maps of irrigated area, Landsat spectral indices, climate, soils, and derived hydrologic variables. The models explained 87% of the variability in irrigation volume in Colorado and 75% in Kansas, but accuracy declined when transferring the models in spatial cross-validation (Colorado R 2 =0.81; Kansas R 2 =0.51) and temporal cross-validation (Colorado R 2 =0.82; Kansas R 2 =0.68). Predicted annual totals of irrigation volume in western Kansas had a mean absolute error of 11.9%, which was slightly higher than the average annual change of 11%. Use of predicted irrigation maps also lead to an underestimated effect size for a water use restriction policy in Kansas. These results indicate that field- and section-scale irrigation can be mapped with reasonable accuracy within a region and time period that has adequate sample data, but that methods may need to be improved for applying the models more broadly in areas that lack extensive in situ irrigation data to support further research on water use and aid in structuring policy.

Colorado Kansas↗

Teams, networks, and networks of networks advancing our understanding and conservation of inland waters

Networks are defined as groups of interconnected people and things, and by this definition, networks play a major role in the science of inland waters. In this article, we bring the latest social network research to understand and improve inland waters science and conservation outcomes. What we found is that relationships matter. Different teams and networks have different objectives and lifespans. Consider this: Data collection networks may persist for decades, whereas knowledge-generating teams may exist only for months. The structure of connections in a network determines how easily information or resources can flow or pass through a network, which then influences the ability of the network to accomplish work like creating and applying new knowledge, integrating knowledge across fields, or coordinating collective action. When independent networks designed around different purposes become connected to achieve new goals, a network of networks is formed, where each layer is a unique network defined by social, geographic, and temporal boundaries and distinct types of connections. This structure has a lot of potential for transformative work, but is especially susceptible to failure if one of the cross-network connections fails. From the smallest of inland waters research teams to the largest, multi-institutional, international collaborations, an understanding of how the connections between people are created and maintained can be used to set up conditions for success.

Book chapter↗

Our evolving conceptual model of the coastal eutrophication problem

A primary focus of coastal science during the past 3 decades has been the question: How does anthropogenic nutrient enrichment cause change in the structure or function of nearshore coastal ecosystems? This theme of environmental science is recent, so our conceptual model of the coastal eutrophication problem continues to change rapidly. In this review, I suggest that the early (Phase I) conceptual model was strongly influenced by limnologists, who began intense study of lake eutrophication by the 1960s. The Phase I model emphasized changing nutrient input as a signal, and responses to that signal as increased phytoplankton biomass and primary production, decomposition of phytoplankton-derived organic matter, and enhanced depletion of oxygen from bottom waters. Coastal research in recent decades has identified key differences in the responses of lakes and coastal-estuarine ecosystems to nutrient enrichment. The contemporary (Phase II) conceptual model reflects those differences and includes explicit recognition of (1) system-specific attributes that act as a filter to modulate the responses to enrichment (leading to large differences among estuarine-coastal systems in their sensitivity to nutrient enrichment); and (2) a complex suite of direct and indirect responses including linked changes in: water transparency, distribution of vascular plants and biomass of macroalgae, sediment biogeochemistry and nutrient cycling, nutrient ratios and their regulation of phytoplankton community composition, frequency of toxic/harmful algal blooms, habitat quality for metazoans, reproduction/growth/survival of pelagic and benthic invertebrates, and subtle changes such as shifts in the seasonality of ecosystem functions. Each aspect of the Phase II model is illustrated here with examples from coastal ecosystems around the world. In the last section of this review I present one vision of the next (Phase III) stage in the evolution of our conceptual model, organized around 5 questions that will guide coastal science in the early 21st century: (1) How do system-specific attributes constrain or amplify the responses of coastal ecosystems to nutrient enrichment? (2) How does nutrient enrichment interact with other stressors (toxic contaminants, fishing harvest, aquaculture, nonindigenous species, habitat loss, climate change, hydrologic manipulations) to change coastal ecosystems? (3) How are responses to multiple stressors linked? (4) How does human-induced change in the coastal zone impact the Earth system as habitat for humanity and other species? (5) How can a deeper scientific understanding of the coastal eutrophication problem be applied to develop tools for building strategies at ecosystem restoration or rehabilitation?

Marine Ecology Progress Series↗

Water-quality trends for streams and reservoirs in the Research Triangle area of North Carolina, 1983-95

Water-quality and streamflow monitoring data, collected from 1983 to 1995, were analyzed for 34 stream and reservoir sites in a seven-county region within the upper Neuse and upper Cape Fear River Basins. Early data (1983-88) were compiled from U.S. Geological Survey water-quality studies and from the ambient water-quality monitoring network of the North Carolina Department of Environment, Health, and Natural Resources. Analyses of major ions, nutrients, metals, trace elements, and synthetic organic compounds were compiled from samples collected by the U.S. Geological Survey from 1988 to 1995 as part of a continuing project to monitor the water quality of surface-water supplies in the Research Triangle area of North Carolina, and from the North Carolina Department of Environment, Health, and Natural Resources ambient water-quality monitoring network. This report presents the results of analysis of consistently increasing or decreasing trends in concentrations of nitrogen and phosphorus species, suspended sediment, suspended solids, sodium, chloride, iron, manganese, zinc, and chlorophyll a from seasonal Kendall trend analysis on flow-adjusted concentrations for streams and concentrations in lakes. Total phosphorus concentrations also were tested for a step decrease in concentration (step trend) associated with the North Carolina phosphate-detergent ban of 1988. For some other constituents, insufficient data or values below laboratory detection limits precluded trend analysis. A regionwide decrease in total phosphorus, ranging from 25 to 81 percent, was observed that coincided with increased phosphorus removal efforts at municipal wastewater-treatment facilities in the region and the statewide phosphate-detergent ban. Most sites had stable or decreasing trends in nitrogen concentrations; however, increasing trends occurred in the Neuse River near Clayton and at Smithfield, both of which are downstream from the developing Raleigh-Durham area. Chlorophyll a concentrations have increased by 17 to 52 percent per year at monitored reservoirs, except at Cane Creek Reservoir and Lake Michie where there was no trend. No significant trends in suspended-sediment concentrations were observed. Long-term sodium concentrations were available for only a few sites. Of these, decreasing concentrations were observed in the Neuse River at Smithfield and Cane Creek near Orange Grove, and an increasing concentration was observed in University Lake. At most sites, concentrations of manganese, iron, and zinc were stable. Decreasing iron trends were observed in Little River and Cane Creek Reservoirs and Lake Michie. Cane Creek Reservoir also had a decreasing manganese trend. Seven sites, all downstream from wastewater-treatment facilities, were analyzed for zinc trends. A decreasing trend was observed in two of these--Knap of Reeds Creek and Little Lick Creek.

North Carolina↗

Guidelines for determining flood flow frequency: Bulletin #17B of the Hydrology Subcommittee

In December 1967, Bulletin No. 15, "A Uniform Technique for Determining Flood Flow Frequencies," was issued by the Hydrology Committee of the Water Resources Council. The report recommended use of the Pearson Type III distribution with log transformation of the data (log-Pearson Type III distribution) as a base method for flood flow frequency studies. As pointed out in that report, further studies were needed covering various aspects of flow frequency determinations. In March 1976, Bulletin 17, "Guidelines for Determining Flood Flow Frequency" was issued by the Water Resources Council. The guide was an extension and update of Bulletin No. 15. It provided a more complete guide for flood flow frequency analysis incorporating currently accepted technical methods with sufficient detail to promote uniform application. It was limited to defining flood potentials in terms of peak discharge and exceedance probability at locations where a systematic record of peak flood flows is available. The recommended set of procedures was selected from those used or described in the literature prior to 1976, based on studies conducted for this purpose at the Center for Research in Water Resources of the University of Texas at Austin (summarized in Appendix 14) and on studies by the Work Group on Flood Flow Frequency. The "Guidelines" were revised and reissued in June 1977 as Bulletin 17A. Bulletin 17B is the latest effort to improve and expand upon the earlier publications. Bulletin 17B provides revised procedures for weighting a station skew value with the results from a generalized skew study, detecting and treating outliers, making two station comparisons, and computing confidence limits about a frequency curve. The Work Group that prepared this revision did not address the suitability of the original distribution or the generalized skew map. Major problems are encountered when developing guides for flood flow frequency determinations. There is no procedure or set of procedures that can be adopted which, when rigidly applied to the available data, will accurately define the flood potential of any given watershed. Statistical analysis alone will not resolve all flood frequency problems. As discussed in subsequent sections of this guide, elements of risk and uncertainty are inherent in any flood frequency analysis. User decisions must be based on properly applied procedures and proper interpretation of results considering risk and uncertainty. Therefore, the judgment of a professional experienced in hydrologic analysis will enhance the usefulness of a flood frequency analysis and promote appropriate application. It is possible to standarize many elements of flood frequency analysis. This guide describes each major element of the process of defining the flood potential at a specific location in terms of peak discharge and exceedance probability. Use is confined to stations where available records are adequate to warrant statistical analysis of the data. Special situations may require other approaches. In those cases where the procedures of this guide are not followed, deviations must be supported by appropriate study and accompanied by a comparison of results using the recommended procedures. As a further means of achieving consistency and improving results, the Work Group recommends that studies be coordinated when more than one analyst is working currently on data for the same location. This recommendation holds particularly when defining exceedance probabilities for rare events, where this guide allows more latitude. Flood records are limited. As more years of record become available at each location, the determination of flood potential may change. Thus, an estimate may be outdated a few years after it is made. Additional flood data alone may be sufficient reason for a fresh assessment of the flood potential. When making a new assessment, the analyst should incorporate in his study a review of earlier estimates. Where differences appear, they should be acknowledged and explained.

Bulletin↗

Post-wildfire water quality and aquatic ecosystem response in the U.S. Pacific Northwest: science and monitoring gaps

An increase in the occurrence of large, high severity wildfires in the western Pacific Northwest (PNW), USA, has created an urgent need for science to better inform forest management and policy decisions to maintain source water quality in the region. The western PNW faces similar challenges to other regions with shifting wildfire regimes and large population centers reliant on surface water from forested catchments. However, the uniquely wet and highly seasonal climate of the western PNW suggests that findings from other, more frequently burned regions may not be directly applicable. To identify science, monitoring, and management gaps and opportunities in the western PNW, this review was collaboratively undertaken by academics, non-government and industry representatives, and local, state, and federal government entities who have been working together since the 2020 Labor Day fires in Oregon. Focusing on Oregon and Washington, we found that monitoring networks for continuous water quantity and quality cover much of the state with greater representation in western U.S. ecoregions, but few studies have analyzed and published these data to capture and communicate the post-wildfire response. Approximately half of the streamgages in Oregon and Washington record major water quality parameters, and hundreds of sites in the area have discrete sampling for a wide range of water quality constituents. Still, numerous gaps exist in understanding the short- and long-term impacts of wildfire on hydrology, water chemistry, including pH and dissolved oxygen, mobilization of metals, aquatic ecosystems, and downstream drinking water treatment. Collective action to further collect, analyze, interpret, and publish the key data could help improve our understanding of post-wildfire water quality impacts in this and other increasingly wildfire-affected regions.

Oregon, Washington↗

Data Used in Analyses of Trends, and Nutrient and Suspended-Sediment Loads for Streams in the Southeastern United States, 1973-2005

Water-quality data from selected surface-water monitoring sites in the Southeastern United States were assessed for trends in concentrations of nutrients, suspended sediment, and major constituents and for in-stream nutrient and suspended-sediment loads for the period 1973-2005. The area of interest includes river basins draining into the southern Atlantic Ocean, the Gulf of Mexico, and the Tennessee River-drainage basins in Hydrologic Regions 03 (South Atlantic - Gulf) and 06 (Tennessee). This data assessment is related to studies of several major river basins as part of the U.S. Geological Survey National Water-Quality Assessment Program, which was designed to assess national water-quality trends during a common time period (1993-2004). Included in this report are data on which trend tests could be performed from 44 U.S. Geological Survey National Water Information System (NWIS) sampling sites. The constituents examined include major ions, nutrients, and suspended sediment; the physical properties examined include pH, specific conductance, dissolved oxygen, and streamflow. Also included are data that were tested for trends from an additional 290 sites from the U.S. Environmental Protection Agency Storage and Retrieval (STORET) database. The trend analyses of the STORET data were limited to total nitrogen and total phosphorus concentrations. Data from 48 U.S. Geological Survey NWIS sampling sites with sufficient water-quality and continuous streamflow data for estimating nutrient and sediment loads are included. The methods of data compilation and modification used prior to performing trend tests and load estimation are described. Results of the seasonal Kendall trend test and the Tobit trend test are given for the 334 monitoring sites, and in-stream load estimates are given for the 48 monitoring sites. Basin characteristics are provided, including regional landscape variables and agricultural nutrient sources (annual variations in cropping and fertilizer use). The data and results presented in this report are in tabular format and can be downloaded and used by environmental researchers and water managers, particularly in the Southeast.

Data Series↗

Predicted pH at the domestic and public supply drinking water depths, Central Valley, California

This scientific investigations map is a product of the U.S. Geological Survey (USGS) National Water-Quality Assessment (NAWQA) project modeling and mapping team. The prediction grids depicted in this map are of continuous pH and are intended to provide an understanding of groundwater-quality conditions at the domestic and public supply drinking water zones in the groundwater of the Central Valley of California. The chemical quality of groundwater and the fate of many contaminants is often influenced by pH in all aquifers. These grids are of interest to water-resource managers, water-quality researchers, and groundwater modelers concerned with the occurrence of natural and anthropogenic contaminants related to pH. In this work, the median well depth categorized as domestic supply was 30 meters below land surface, and the median well depth categorized as public supply is 100 meters below land surface. Prediction grids were created using prediction modeling methods, specifically boosted regression trees (BRT) with a Gaussian error distribution within a statistical learning framework within the computing framework of R ( http://www.r-project.org/ ). The statistical learning framework seeks to maximize the predictive performance of machine learning methods through model tuning by cross validation. The response variable was measured pH from 1,337 wells and was compiled from two sources: USGS National Water Information System (NWIS) database (all data are publicly available from the USGS: http://waterdata.usgs.gov/ca/nwis/nwis ) and the California State Water Resources Control Board Division of Drinking Water (SWRCB-DDW) database (water quality data are publicly available from the SWRCB: http://www.waterboards.ca.gov/gama/geotracker_gama.shtml ). Only wells with measured pH and well depth data were selected, and for wells with multiple records, only the most recent sample in the period 1993–2014 was used. A total of 1,003 wells (training dataset) were used to train the BRT model, and 334 wells (hold-out dataset) were used to validate the prediction model. The training r-squared was 0.70, and the root-mean-square error (RMSE) in standard pH units was 0.26. The hold-out r-squared was 0.43, and RMSE in standard pH units was 0.37. Predictor variables consisting of more than 60 variables from 7 sources were assembled to develop a model that incorporates regional-scale soil properties, soil chemistry, land use, aquifer textures, and aquifer hydrology. Previously developed Central Valley model outputs of textures (Central Valley Textural Model, CVTM; Faunt and others, 2010) and MODFLOW-simulated vertical water fluxes and predicted depth to water table (Central Valley Hydrologic Model, CVHM; Faunt, 2009) were used to represent aquifer textures and groundwater hydraulics, respectively. In this work, wells were attributed to predictor variable values in ArcGIS using a 500-meter buffer. Faunt, C.C., ed., 2009, Groundwater availability in the Central Valley aquifer, California: U.S. Geological Survey Professional Paper 1776, 225 p., accessed at https://pubs.usgs.gov/pp/1766/ . Faunt, C.C., Belitz, K., and Hanson, R.T., 2010, Development of a three-dimensional model of sedimentary texture in valley-fill deposits of Central Valley, California, USA: Hydrogeology Journal, v. 18, no. 3, p. 625–649, https://doi.org/10.1007/s10040-009-0539-7 .

California↗

A review and synthesis of post-wildfire shifts in hydrologic processes and streamflow generation mechanisms

Critical water supply watersheds in the western United States (WUS) are impacted by wildfires, with potential negative effects on water quality and quantity. Scientific understanding is currently insufficient to deliver estimates of wildfire consequences for water quantity that are regionally accurate. Regional variability in the directionality and magnitude of post-wildfire shifts in streamflow generation fuels uncertainty in estimates of wildfire effects on water supply. In this work we provide a narrative review of wildfire effects on hydrologic processes and the resulting changes in streamflow generation mechanisms with a focus on the WUS, incorporating other global regions when pertinent. A conceptual model summary of wildfire effects on streamflow generation emphasizes: (1) precipitation seasonality, (2) synchrony of precipitation and potential evapotranspiration, (3) net shifts in interception, evaporation, and transpiration relative to total annual precipitation, (4) vegetation changes, including compensatory uptake and type conversion, (5) degree of overlap in rainfall rates and infiltration, (6) fire extent and severity, (7) burn scar positioning (e.g. in headwaters or proximal to watershed outlet), (8) scale-dependent groundwater leakage, (9) near-surface water storage reduction, and (10) soil to groundwater connectivity. Ongoing gaps and challenges include separating the influences of precipitation variability, water withdrawals, and post-fire land management; compound and overlapping disturbances; and lack of pre-fire data. Notable future opportunities include: harnessing ever-improving gridded and remotely sensed precipitation and fire-effects data; linking geophysical, isotopic tracer, and geochemical signatures to diagnose hydrologic changes; leveraging physically based and data-driven model advancements; and analyzing streamflow generation recovery trajectories across diverse watersheds.

western United States↗

Isothermal recombinant polymerase amplification and CRIPSR (CAS12A) assay detection of Renibacterium salmoninarum as an example for wildlife pathogen detection in environmental DNA samples

Improving rapid detection methods for pathogens is important for research as we collectively aim to improve the health of ecosystems globally. In the northern hemisphere, the success of salmon ( Oncorhynchus spp.) populations is vitally important to the larger marine, aquatic, and terrestrial ecosystems they inhabit. This has led to managers cultivating salmon in hatcheries and aquaculture to bolster their populations, but young salmon face many challenges, including diseases such as bacterial kidney disease (BKD). Early detection of the BKD causative agent, Renibacterium salmoninarum , is useful for managers to avoid outbreaks in hatcheries and aquaculture stocks to enable rapid treatment with targeted antibiotics. Isothermal amplification and CRIPSR-Cas12a systems may enable sensitive, relatively rapid, detection of target DNA molecules from environmental samples compared to quantitative PCR (qPCR) and culture methods. We used these technologies to develop a sensitive and specific rapid assay to detect R. salmoninarum from water samples using isothermal recombinase polymerase amplification (RPA) and an AsCas12a RNA-guided nuclease detection. The assay was specific to R. salmoninarum (0/10 co-occurring or closely related bacteria detected) and sensitive to 0.0128 pg/µL of DNA (approximately 20–40 copies/µL) within 10 min of Cas activity. This assay successfully detected R. salmoninarum environmental DNA in 14/20 water samples from hatcheries with known quantification for the pathogen via previous qPCR (70% of qPCR-positive samples). The RPA-CRISPR/AsCas12a assay had a limit of detection (LOD) of >10 copies/µL in the hatchery water samples and stochastic detection below 10 copies/µL, similar to but slightly higher than the qPCR assay. This LOD enables 37 C isothermal detection, potentially in the field, of biologically relevant levels of R. salmoninarum in water. Further research is needed to develop easy-to-use, cost-effective, sensitive RPA/CRISPR-AsCas12a assays for rapidly detecting low concentrations of wildlife pathogens in environmental samples.

Journal of Wildlife Diseases↗

Prediction and visualization of redox conditions in the groundwater of Central Valley, California

Regional-scale, three-dimensional continuous probability models, were constructed for aspects of redox conditions in the groundwater system of the Central Valley, California. These models yield grids depicting the probability that groundwater in a particular location will have dissolved oxygen (DO) concentrations less than selected threshold values representing anoxic groundwater conditions, or will have dissolved manganese (Mn) concentrations greater than selected threshold values representing secondary drinking water-quality contaminant levels (SMCL) and health-based screening levels (HBSL). The probability models were constrained by the alluvial boundary of the Central Valley to a depth of approximately 300 m. Probability distribution grids can be extracted from the 3-D models at any desired depth, and are of interest to water-resource managers, water-quality researchers, and groundwater modelers concerned with the occurrence of natural and anthropogenic contaminants related to anoxic conditions. Models were constructed using a Boosted Regression Trees (BRT) machine learning technique that produces many trees as part of an additive model and has the ability to handle many variables, automatically incorporate interactions, and is resistant to collinearity. Machine learning methods for statistical prediction are becoming increasing popular in that they do not require assumptions associated with traditional hypothesis testing. Models were constructed using measured dissolved oxygen and manganese concentrations sampled from 2767 wells within the alluvial boundary of the Central Valley, and over 60 explanatory variables representing regional-scale soil properties, soil chemistry, land use, aquifer textures, and aquifer hydrologic properties. Models were trained on a USGS dataset of 932 wells, and evaluated on an independent hold-out dataset of 1835 wells from the California Division of Drinking Water. We used cross-validation to assess the predictive performance of models of varying complexity, as a basis for selecting final models. Trained models were applied to cross-validation testing data and a separate hold-out dataset to evaluate model predictive performance by emphasizing three model metrics of fit: Kappa; accuracy; and the area under the receiver operator characteristic curve (ROC). The final trained models were used for mapping predictions at discrete depths to a depth of 304.8 m. Trained DO and Mn models had accuracies of 86–100%, Kappa values of 0.69–0.99, and ROC values of 0.92–1.0. Model accuracies for cross-validation testing datasets were 82–95% and ROC values were 0.87–0.91, indicating good predictive performance. Kappas for the cross-validation testing dataset were 0.30–0.69, indicating fair to substantial agreement between testing observations and model predictions. Hold-out data were available for the manganese model only and indicated accuracies of 89–97%, ROC values of 0.73–0.75, and Kappa values of 0.06–0.30. The predictive performance of both the DO and Mn models was reasonable, considering all three of these fit metrics and the low percentages of low-DO and high-Mn events in the data.

California↗

Natural resource mitigation, adaptation and research needs related to climate change in the Great Basin and Mojave Desert

This report synthesizes the knowledge, opinions, and concerns of many Federal and State land managers, scientists, stakeholders, and partners from a workshop, held at the University of Nevada, Las Vegas, on April 20-22, 2010. Land managers, research scientists, and resource specialists identified common concerns regarding the potential effects of climate change on public lands and natural resources in the Great Basin and Mojave Desert and developed recommendations for mitigation, adaptation, and research needs. Water and, conversely, the effects of drought emerged as a common theme in all breakout sessions on terrestrial and aquatic species at risk, managing across boundaries, monitoring, and ecosystem services. Climate change models for the southwestern deserts predict general warming and drying with increasing precipitation variability year to year. Scientists noted that under these changing conditions the past may no longer be a guide to the future in which managers envision increasing conflicts between human water uses and sustaining ecosystems. Increasing environmental stress also is expected as a consequence of shifting ecosystem boundaries and species distributions, expansion of non-native species, and decoupling of biotic mutualisms, leading to increasingly unstable biologic communities. Managers uniformly expressed a desire to work across management and agency boundaries at a landscape scale but conceded that conflicting agency missions and budgetary constraints often impede collaboration. More and better science is needed to cope with the effects of climate change but, perhaps even more important is the application of science to management issues using the methods of adaptive management based on long-term monitoring to assess the merits of management actions. Access to data is essential for science-based land management. Basic inventories, spatial databases, baseline condition assessments, data quality assurance, and data sharing were identified as top information priorities by all participants at this workshop. Optimizing the utility of ecosystem monitoring data will require standardizing monitoring protocols across agencies. Better communication among researchers and managers and cooperation through partnerships to manage resources across boundaries were emphasized as necessary for adapting to changing climatic conditions. However, even these strategies may be insufficient unless policy mandates, agency missions, and funding are coordinated at a high level.

Scientific Investigations Report↗